AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1346220

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1346220 MtrunA17_Chr2g0307851 94.925 670 28 2 1 664 1 670 0.0 1229
Msa1346220 MtrunA17_Chr4g0061881 78.814 590 124 1 75 663 68 657 0.0 968
Msa1346220 MtrunA17_Chr4g0061841 52.412 311 64 5 149 459 8 234 5.94e-95 292
Msa1346220 MtrunA17_Chr4g0073611 49.196 311 112 6 150 455 2 271 2.87e-89 280
Msa1346220 MtrunA17_Chr5g0408331 43.750 368 117 6 77 443 34 312 3.30e-88 278
Msa1346220 MtrunA17_Chr5g0437391 44.974 378 118 12 196 566 6 300 3.74e-82 263
Msa1346220 MtrunA17_Chr4g0076561 63.636 209 40 2 344 552 14 186 1.28e-79 251
Msa1346220 MtrunA17_Chr4g0069071 39.687 383 198 11 136 507 11 371 1.43e-68 228
Msa1346220 MtrunA17_Chr8g0344851 62.778 180 56 5 425 601 1 172 1.98e-58 195
Msa1346220 MtrunA17_Chr4g0061831 85.437 103 15 0 487 589 9 111 9.94e-54 179
Msa1346220 MtrunA17_Chr4g0064001 51.724 203 72 6 450 640 4 192 1.70e-48 169
Msa1346220 MtrunA17_Chr4g0076571 69.072 97 30 0 146 242 2 98 2.43e-44 153
Msa1346220 MtrunA17_Chr8g0344821 64.815 108 36 1 491 598 5 110 6.44e-36 131
Msa1346220 MtrunA17_Chr5g0437441 56.190 105 40 3 102 203 1 102 1.69e-28 109
Msa1346220 MtrunA17_Chr8g0344831 51.181 127 49 2 320 446 5 118 1.29e-26 105
Msa1346220 MtrunA17_Chr4g0073621 75.758 66 14 1 539 602 1 66 4.67e-26 102
Msa1346220 MtrunA17_Chr5g0408341 60.494 81 32 0 544 624 1 81 9.03e-25 100
Msa1346220 MtrunA17_Chr5g0437451 82.353 51 9 0 541 591 98 148 1.34e-21 92.0
Msa1346220 MtrunA17_Chr4g0069081 50.000 86 43 0 520 605 2 87 5.77e-21 88.6
Msa1346220 MtrunA17_Chr4g0063991 57.143 84 24 2 342 425 2 73 1.16e-19 84.0
Msa1346220 MtrunA17_Chr4g0063981 45.070 71 29 2 179 249 1 61 9.82e-12 61.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1346220 AT1G73990.1 68.929 663 181 6 11 664 30 676 0.0 907
Msa1346220 AT1G73990.2 69.444 540 140 6 11 541 30 553 0.0 749

Find 168 sgRNAs with CRISPR-Local

Find 677 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCCTATGATCCTCGAATTTC+TGG 0.156422 tig0008586:+23789 Msa1346220:CDS
AAATGGACACTTGGAATTTC+AGG 0.199983 tig0008586:+27854 Msa1346220:CDS
ATTGAATGAAATAAAATTAA+AGG 0.231334 tig0008586:-22207 None:intergenic
ATAGTATATCCATTATTAAA+TGG 0.254662 tig0008586:-33016 None:intergenic
CATACATTAAATTTGATATA+AGG 0.278743 tig0008586:-26507 None:intergenic
TTTGAATTTGAACCTATTAC+TGG 0.285214 tig0008586:+22499 Msa1346220:CDS
GCAGAAAGTCTTACGTTAAC+TGG 0.296101 tig0008586:+29419 Msa1346220:CDS
CTTACTCGCCCATTTAATAA+TGG 0.310770 tig0008586:+33007 Msa1346220:three_prime_UTR
ATATGCATTCTGTGCAGATT+TGG 0.331313 tig0008586:-32138 None:intergenic
AACTGCCAACGGTCGATTAC+GGG 0.340728 tig0008586:+26914 Msa1346220:CDS
CATGGTTTGGTTGATGCTAT+TGG 0.357229 tig0008586:+32359 Msa1346220:CDS
GGTGTTGCGGCGGTAGAGGG+GGG 0.359266 tig0008586:-22275 None:intergenic
GCAAATAGCTCTGCTTCATC+TGG 0.360163 tig0008586:-32116 None:intergenic
AGGTGTTGCGGCGGTAGAGG+GGG 0.360641 tig0008586:-22276 None:intergenic
AAACTGCCAACGGTCGATTA+CGG 0.362185 tig0008586:+26913 Msa1346220:CDS
GACAAAATGGGGTTGTCGTT+GGG 0.368893 tig0008586:-32712 None:intergenic
ACGTGCTTTCAACTCCGGTT+AGG 0.374016 tig0008586:-32603 None:intergenic
CACAGTTTAAACTATCAATA+TGG 0.374090 tig0008586:-23821 None:intergenic
AAATTCCTCCAACCAGTAAT+AGG 0.377007 tig0008586:-22511 None:intergenic
AAGGTGTTGCGGCGGTAGAG+GGG 0.381937 tig0008586:-22277 None:intergenic
AAAACCAGTCATTGCTTCAA+TGG 0.389485 tig0008586:+29340 Msa1346220:CDS
CTTACGTTAACTGGTTCAAT+TGG 0.395398 tig0008586:+29428 Msa1346220:CDS
AGGTAGCACAGGGTAGAGTT+TGG 0.398928 tig0008586:+32315 Msa1346220:CDS
TACAATGAAGCTTCGTGGCC+AGG 0.399382 tig0008586:+22597 Msa1346220:CDS
AATGAATTATTAAAATCTAC+AGG 0.400136 tig0008586:-32759 None:intergenic
ATAGCCATCATCCGGGCCTC+AGG 0.402955 tig0008586:+27890 Msa1346220:CDS
AGGGAGCATTAGTCGAGTTA+AGG 0.410229 tig0008586:+27910 Msa1346220:CDS
CTGTTCGTCCTGAGGTATAT+TGG 0.410992 tig0008586:-32420 None:intergenic
TTCAAATTCAAATTCTCCAC+TGG 0.413968 tig0008586:-22488 None:intergenic
TTGGAGGAATTTCGTCGTTA+AGG 0.417101 tig0008586:+22522 Msa1346220:CDS
ATTGAGAACTTTATAAATGA+AGG 0.419440 tig0008586:+26451 Msa1346220:CDS
AGATGCAGCATCACATGGTT+TGG 0.425370 tig0008586:+32346 Msa1346220:CDS
CGTGCTTTCAACTCCGGTTA+GGG 0.429338 tig0008586:-32602 None:intergenic
AATACTCCCGGGTTAGGAAA+TGG 0.431438 tig0008586:+27837 Msa1346220:CDS
CACGTTGAAGGAACTGCTAC+AGG 0.432578 tig0008586:+32621 Msa1346220:CDS
CCTATGATCCTCGAATTTCT+GGG 0.434964 tig0008586:+23790 Msa1346220:CDS
TAGTATATCCATTATTAAAT+GGG 0.436210 tig0008586:-33015 None:intergenic
TGTCTCATCTGGACTTCTGT+AGG 0.442944 tig0008586:+32963 Msa1346220:three_prime_UTR
AGGTAGAGAGGGACTAGATC+TGG 0.444443 tig0008586:-32554 None:intergenic
GTCTCATCTGGACTTCTGTA+GGG 0.448382 tig0008586:+32964 Msa1346220:three_prime_UTR
ACAGGAAATACTCCCGGGTT+AGG 0.449319 tig0008586:+27831 Msa1346220:intron
ATAAGGTGTTGCGGCGGTAG+AGG 0.455950 tig0008586:-22279 None:intergenic
AATGGATATACTATTTCTCT+TGG 0.458430 tig0008586:+33025 Msa1346220:three_prime_UTR
CAATATACCTCAGGACGAAC+AGG 0.460640 tig0008586:+32421 Msa1346220:CDS
AAGAACTGATAGCCATCATC+CGG 0.468277 tig0008586:+27882 Msa1346220:CDS
TATGCCTGGATTGTCTCATC+TGG 0.468428 tig0008586:+32952 Msa1346220:three_prime_UTR
CCCAGAAATTCGAGGATCAT+AGG 0.470601 tig0008586:-23790 None:intergenic
TAGATAATATCTATACAAAC+TGG 0.471417 tig0008586:+26311 Msa1346220:CDS
GGGAGCATTAGTCGAGTTAA+GGG 0.472364 tig0008586:+27911 Msa1346220:CDS
TTAGGATGTGGAGAGAAATT+CGG 0.477457 tig0008586:+29303 Msa1346220:intron
GAGGCAAGAGCGTCACCTCC+AGG 0.482340 tig0008586:-28622 None:intergenic
CAGTTAAGTGTCTCTAGCTC+AGG 0.482587 tig0008586:+27935 Msa1346220:CDS
TGACAAAATGGGGTTGTCGT+TGG 0.483685 tig0008586:-32713 None:intergenic
GCAGGTTACTGACATGTTGA+AGG 0.485150 tig0008586:+26864 Msa1346220:intron
AGATGCTCATTGCGTATCCA+TGG 0.485437 tig0008586:+22548 Msa1346220:CDS
GTGTTGCGGCGGTAGAGGGG+GGG 0.488093 tig0008586:-22274 None:intergenic
CAAGTGTCCATTTCCTAACC+CGG 0.488540 tig0008586:-27844 None:intergenic
GGCGCACGGAGTTCCCTAAC+CGG 0.489745 tig0008586:+32589 Msa1346220:CDS
TAAGGTGTTGCGGCGGTAGA+GGG 0.494514 tig0008586:-22278 None:intergenic
GACTAATGCTCCCTGAGGCC+CGG 0.494942 tig0008586:-27901 None:intergenic
TTGAACCTATTACTGGTTGG+AGG 0.497114 tig0008586:+22506 Msa1346220:CDS
TTAATAAAGAAATCATATCA+AGG 0.499995 tig0008586:+30900 Msa1346220:CDS
CTTCAACGTGCTTTCAACTC+CGG 0.501193 tig0008586:-32608 None:intergenic
CAAGATGGAGGAGGTAGCAC+AGG 0.504381 tig0008586:+32304 Msa1346220:CDS
GCTCCCTGAGGCCCGGATGA+TGG 0.505280 tig0008586:-27894 None:intergenic
GCGAAACTGTATGAGAAGAT+TGG 0.507637 tig0008586:+30875 Msa1346220:CDS
TTGCCAATCCTTTCCACTTG+CGG 0.509346 tig0008586:-26214 None:intergenic
CGTGCGCCTAATAAAATCTC+AGG 0.511141 tig0008586:-32574 None:intergenic
GTTCTTACAATGAAGCTTCG+TGG 0.512091 tig0008586:+22592 Msa1346220:CDS
TTTCTGATGGAGTTCAAGCT+AGG 0.514681 tig0008586:+32653 Msa1346220:CDS
AGTGAAGAGTAGATTCTCTC+CGG 0.517158 tig0008586:+23725 Msa1346220:CDS
AGAACATACAGTCATAGATC+TGG 0.517426 tig0008586:-32189 None:intergenic
TGATAGTTTAAACTGTGGGT+GGG 0.519618 tig0008586:+23827 Msa1346220:CDS
GATAGTTTAAACTGTGGGTG+GGG 0.519973 tig0008586:+23828 Msa1346220:CDS
GGAGGATACTACATGGCAAT+GGG 0.520535 tig0008586:+29380 Msa1346220:CDS
TGATGGAGTTCAAGCTAGGA+TGG 0.520543 tig0008586:+32657 Msa1346220:CDS
TATTGCCATAGCAAAATTGA+AGG 0.523316 tig0008586:+32397 Msa1346220:CDS
CTCAACCTAGGTGGACAAGA+TGG 0.525487 tig0008586:+32289 Msa1346220:intron
ATAGTAAGAATACATATGCC+TGG 0.529719 tig0008586:+32938 Msa1346220:three_prime_UTR
ATTATCAGAATTGACAGTCC+TGG 0.529856 tig0008586:+28604 Msa1346220:CDS
TTGATAGTTTAAACTGTGGG+TGG 0.533991 tig0008586:+23826 Msa1346220:CDS
GGTTTGGTTGATGCTATTGG+TGG 0.533991 tig0008586:+32362 Msa1346220:CDS
AATTTGAACCTATTACTGGT+TGG 0.537190 tig0008586:+22503 Msa1346220:CDS
TAATATCTATACAAACTGGC+TGG 0.538238 tig0008586:+26315 Msa1346220:CDS
CGGAGTTGAAAGCACGTTGA+AGG 0.539872 tig0008586:+32609 Msa1346220:CDS
ATTGGCAAGTACAAAAGTGC+AGG 0.541412 tig0008586:+26229 Msa1346220:CDS
GGTTCAATTGGAGTGGTCAC+AGG 0.541619 tig0008586:+29440 Msa1346220:CDS
CGGGTTAGGAAATGGACACT+TGG 0.542638 tig0008586:+27845 Msa1346220:CDS
AAAGAAAAGTAAGCACTTGG+AGG 0.543239 tig0008586:-24713 None:intergenic
GAACCGCAAGTGGAAAGGAT+TGG 0.547009 tig0008586:+26211 Msa1346220:CDS
TCTTCTCATACAGTTTCGCT+AGG 0.547877 tig0008586:-30871 None:intergenic
AACAAAGAAAAGTAAGCACT+TGG 0.548235 tig0008586:-24716 None:intergenic
GGAGTTCAAGCTAGGATGGA+TGG 0.550073 tig0008586:+32661 Msa1346220:CDS
TTCTACCCGTAATCGACCGT+TGG 0.552327 tig0008586:-26919 None:intergenic
CCTTTACGAACACGTTCCCA+TGG 0.553283 tig0008586:-22565 None:intergenic
ATTGAAGGCCAATATACCTC+AGG 0.554095 tig0008586:+32412 Msa1346220:CDS
CCATGGGAACGTGTTCGTAA+AGG 0.554425 tig0008586:+22565 Msa1346220:CDS
TTGAACACAGGAAATACTCC+CGG 0.555818 tig0008586:+27825 Msa1346220:intron
GCTTGTAGGAAAATTTGTTG+TGG 0.558144 tig0008586:+24625 Msa1346220:intron
ATATTGATAGTTTAAACTGT+GGG 0.562161 tig0008586:+23823 Msa1346220:CDS
AATAAAATCTCAGGTAGAGA+GGG 0.563178 tig0008586:-32565 None:intergenic
TCAGCCATTGAAGCAATGAC+TGG 0.563949 tig0008586:-29344 None:intergenic
TAATAAAGAAATCATATCAA+GGG 0.565337 tig0008586:+30901 Msa1346220:CDS
TCAAATTCAAATTCTCCACT+GGG 0.565424 tig0008586:-22487 None:intergenic
AAATTTAATGTATGATGATG+AGG 0.565513 tig0008586:+26516 Msa1346220:CDS
TGGAGGATACTACATGGCAA+TGG 0.566417 tig0008586:+29379 Msa1346220:CDS
GGAAGAATCGAAAGCGCGAA+GGG 0.566779 tig0008586:-22395 None:intergenic
TACCAGAACTTACAAATCAG+AGG 0.568309 tig0008586:-28641 None:intergenic
AATAGGAGTTGAACCGCAAG+TGG 0.570611 tig0008586:+26201 Msa1346220:CDS
CAGCTTACCTCTGAGGAATG+AGG 0.572547 tig0008586:-24756 None:intergenic
CATTGCTTCAATGGCTGATG+TGG 0.572578 tig0008586:+29349 Msa1346220:CDS
AAGAAAAGTAAGCACTTGGA+GGG 0.573901 tig0008586:-24712 None:intergenic
TGAACACAGGAAATACTCCC+GGG 0.579067 tig0008586:+27826 Msa1346220:intron
GAGTTGAACCGCAAGTGGAA+AGG 0.579458 tig0008586:+26206 Msa1346220:CDS
TAGCCATCATCCGGGCCTCA+GGG 0.580655 tig0008586:+27891 Msa1346220:CDS
GTTAACTGGTTCAATTGGAG+TGG 0.581126 tig0008586:+29433 Msa1346220:CDS
AAGTCCAGATGAGACAATCC+AGG 0.583833 tig0008586:-32956 None:intergenic
AAGTGTCCATTTCCTAACCC+GGG 0.584075 tig0008586:-27843 None:intergenic
CGTTGAAGGAACTGCTACAG+GGG 0.585808 tig0008586:+32623 Msa1346220:CDS
CTATGGCAATAGCTCGGGAA+AGG 0.585943 tig0008586:-32385 None:intergenic
TAATAAAATCTCAGGTAGAG+AGG 0.589084 tig0008586:-32566 None:intergenic
GAGAAGATTCGCACTGTCAG+AGG 0.592913 tig0008586:+27980 Msa1346220:CDS
AGTGAAGTGATGAGCTGACA+AGG 0.595826 tig0008586:-22142 None:intergenic
GATGCTCATTGCGTATCCAT+GGG 0.597452 tig0008586:+22549 Msa1346220:CDS
GTTGATAAGCTGAAAGAAGA+GGG 0.598500 tig0008586:+26484 Msa1346220:CDS
AGATAGACCCCAGAAATTCG+AGG 0.602106 tig0008586:-23798 None:intergenic
ATGGCTGATGTGGCAGCAAG+TGG 0.602616 tig0008586:+29359 Msa1346220:CDS
GTGAAGAGTAGATTCTCTCC+GGG 0.602919 tig0008586:+23726 Msa1346220:CDS
CATATTGATAGTTTAAACTG+TGG 0.604388 tig0008586:+23822 Msa1346220:CDS
ATGTACGTACAGTGATTGCG+AGG 0.604584 tig0008586:-32874 None:intergenic
GATAAAGTCTCTTCTGCCAA+AGG 0.606342 tig0008586:+26337 Msa1346220:CDS
AGGAAGAATCGAAAGCGCGA+AGG 0.606434 tig0008586:-22396 None:intergenic
GAAAGACCAGCTTACCTCTG+AGG 0.608420 tig0008586:-24763 None:intergenic
GACATGTTGAAGGAGAGACT+TGG 0.612900 tig0008586:+26874 Msa1346220:CDS
TCTCATCTGGACTTCTGTAG+GGG 0.617749 tig0008586:+32965 Msa1346220:three_prime_UTR
ACGTTGAAGGAACTGCTACA+GGG 0.618985 tig0008586:+32622 Msa1346220:CDS
AGTTGATAAGCTGAAAGAAG+AGG 0.622772 tig0008586:+26483 Msa1346220:CDS
AATAAAGAAATCATATCAAG+GGG 0.623523 tig0008586:+30902 Msa1346220:CDS
TAACTAACCTGTTCGTCCTG+AGG 0.625627 tig0008586:-32428 None:intergenic
GGTAAAGATGCAGCATCACA+TGG 0.630228 tig0008586:+32341 Msa1346220:CDS
TGGACACTTGGAATTTCAGG+TGG 0.630389 tig0008586:+27857 Msa1346220:CDS
AGAACTGATAGCCATCATCC+GGG 0.633122 tig0008586:+27883 Msa1346220:CDS
TAGCTCAGGCATCACTGCGG+AGG 0.634924 tig0008586:+27949 Msa1346220:CDS
AGAAAAGTAAGCACTTGGAG+GGG 0.636043 tig0008586:-24711 None:intergenic
GTAAAGTAGAAGAAATTCGA+AGG 0.637376 tig0008586:+23850 Msa1346220:CDS
AGCAAGTGGAGGATACTACA+TGG 0.638303 tig0008586:+29373 Msa1346220:CDS
CTAGGTGGACAAGATGGAGG+AGG 0.639098 tig0008586:+32295 Msa1346220:intron
GCACAGGGTAGAGTTTGGAC+TGG 0.644303 tig0008586:+32320 Msa1346220:CDS
GCTATGCCAGGTAACTGTTG+TGG 0.645235 tig0008586:+32525 Msa1346220:intron
AACCTAGGTGGACAAGATGG+AGG 0.648031 tig0008586:+32292 Msa1346220:intron
CTATGATCCTCGAATTTCTG+GGG 0.650704 tig0008586:+23791 Msa1346220:CDS
ATTTGAGGTAGAGAAAGTCC+CGG 0.652101 tig0008586:-23744 None:intergenic
ATGAATTATTAAAATCTACA+GGG 0.660702 tig0008586:-32758 None:intergenic
TTAAAATCTACAGGGAACTG+AGG 0.661779 tig0008586:-32750 None:intergenic
GCTGATGTGGCAGCAAGTGG+AGG 0.665663 tig0008586:+29362 Msa1346220:CDS
ATCAGAATTGACAGTCCTGG+AGG 0.668918 tig0008586:+28607 Msa1346220:CDS
TGTACGTACAGTGATTGCGA+GGG 0.672180 tig0008586:-32873 None:intergenic
ATATAAACAATTTCGAGACA+AGG 0.676264 tig0008586:+32157 Msa1346220:CDS
AAGATGGAGGAGGTAGCACA+GGG 0.676774 tig0008586:+32305 Msa1346220:CDS
TCTCTTCACATGCACACGCG+AGG 0.678266 tig0008586:-24682 None:intergenic
GGCTGACATAAACGAAGACG+TGG 0.691460 tig0008586:+22108 None:intergenic
ATGATGATGATAAGGTGTTG+CGG 0.697257 tig0008586:-22288 None:intergenic
GTACGTACAGTGATTGCGAG+GGG 0.704083 tig0008586:-32872 None:intergenic
GCTGATGAAGATTATCCCAG+TGG 0.718921 tig0008586:+22472 Msa1346220:CDS
GTTCAAGCCTCATTCCTCAG+AGG 0.722696 tig0008586:+24749 Msa1346220:CDS
AACTCGACTAATGCTCCCTG+AGG 0.724123 tig0008586:-27906 None:intergenic
CTCTAGCTCAGGCATCACTG+CGG 0.730860 tig0008586:+27946 Msa1346220:CDS
ATGATGATAAGGTGTTGCGG+CGG 0.786339 tig0008586:-22285 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTGAATGAAATAAAATTAA+AGG - tig0008586:22210-22229 None:intergenic 10.0%
!!! CTTTATTTTATTTTGTTTAA+TGG - tig0008586:23070-23089 None:intergenic 10.0%
!! TTGACAAAAATAAAATAAAA+TGG + tig0008586:25284-25303 Msa1346220:intron 10.0%
!! TTAAACACTAAATATATAAA+AGG + tig0008586:25325-25344 Msa1346220:intron 10.0%
!! TAAACACTAAATATATAAAA+GGG + tig0008586:25326-25345 Msa1346220:intron 10.0%
!! TAAAATATTATAGATGTATA+TGG + tig0008586:25965-25984 Msa1346220:intron 10.0%
!!! TTTAATAATTTGATTTGTAT+TGG + tig0008586:28703-28722 Msa1346220:intron 10.0%
!! TATATTAATAATAATAGGTA+TGG - tig0008586:31096-31115 None:intergenic 10.0%
!! TAATGTAATGTAAAAAAGTT+TGG + tig0008586:22724-22743 Msa1346220:intron 15.0%
!! AATGTAATGTAAAAAAGTTT+GGG + tig0008586:22725-22744 Msa1346220:intron 15.0%
!! AACATACTATATGTATATTT+GGG - tig0008586:23642-23661 None:intergenic 15.0%
!!! TTTACATTTTAGAGAAAATA+TGG + tig0008586:24553-24572 Msa1346220:intron 15.0%
!!! CAATAAATTACCTTTTTTTT+TGG + tig0008586:24815-24834 Msa1346220:intron 15.0%
!!! AAATTTTCCCATTATATTTT+AGG + tig0008586:25141-25160 Msa1346220:intron 15.0%
!!! GTGTTTTCAAATAAAAATTA+TGG + tig0008586:25240-25259 Msa1346220:intron 15.0%
!!! AATTTGAAACAACAATTAAA+AGG + tig0008586:25355-25374 Msa1346220:intron 15.0%
!!! TTGTTTTAAAGAGAAATTAT+TGG - tig0008586:25746-25765 None:intergenic 15.0%
!!! ACATCTATAATATTTTAGAA+AGG - tig0008586:25962-25981 None:intergenic 15.0%
!! CATACATTAAATTTGATATA+AGG - tig0008586:26510-26529 None:intergenic 15.0%
!! GAATATATATTAATAAAAGC+TGG - tig0008586:26594-26613 None:intergenic 15.0%
!! AAGATAAAATTGAAACTTTA+CGG - tig0008586:27040-27059 None:intergenic 15.0%
!!! AATTTTACAATTAGTGTATA+CGG + tig0008586:27577-27596 Msa1346220:intron 15.0%
!!! ATCATCTTGATATTTTATTT+TGG - tig0008586:27793-27812 None:intergenic 15.0%
!! AATATTATATTGGTATTTAC+CGG + tig0008586:28079-28098 Msa1346220:intron 15.0%
!!! ATATGTTTATTTATTTTCTC+TGG - tig0008586:28311-28330 None:intergenic 15.0%
!! ATTATAATAATTAGAAGTTG+TGG - tig0008586:28502-28521 None:intergenic 15.0%
!!! TTTTGAAAATAAAACTAACA+TGG - tig0008586:28677-28696 None:intergenic 15.0%
!!! CAAAAAAATTTGTCAAATTT+TGG + tig0008586:28934-28953 Msa1346220:intron 15.0%
!!! AATCTAACTAAAAAAAGTAT+AGG + tig0008586:29521-29540 Msa1346220:intron 15.0%
!! TTAATAAAGAAATCATATCA+AGG + tig0008586:30900-30919 Msa1346220:CDS 15.0%
!! TAATAAAGAAATCATATCAA+GGG + tig0008586:30901-30920 Msa1346220:CDS 15.0%
!! TGAAACTCAAATTATAAATT+TGG - tig0008586:31153-31172 None:intergenic 15.0%
!! ATTATGTAAAACTTAATTCA+TGG - tig0008586:31465-31484 None:intergenic 15.0%
!!! AATCTTCATAATCAATTTTT+TGG + tig0008586:31512-31531 Msa1346220:intron 15.0%
!! TTAATAATGGTATGAATTAT+TGG + tig0008586:31842-31861 Msa1346220:intron 15.0%
!! TAATAATGGTATGAATTATT+GGG + tig0008586:31843-31862 Msa1346220:intron 15.0%
!!! TGTTTTTAATCTTTAATTGA+CGG + tig0008586:32058-32077 Msa1346220:intron 15.0%
!!! TCTTTTATAATTGACAAAAT+GGG - tig0008586:32727-32746 None:intergenic 15.0%
!!! ATCTTTTATAATTGACAAAA+TGG - tig0008586:32728-32747 None:intergenic 15.0%
!! ATGAATTATTAAAATCTACA+GGG - tig0008586:32761-32780 None:intergenic 15.0%
!! AATGAATTATTAAAATCTAC+AGG - tig0008586:32762-32781 None:intergenic 15.0%
!! TAGTATATCCATTATTAAAT+GGG - tig0008586:33018-33037 None:intergenic 15.0%
!! ATAGTATATCCATTATTAAA+TGG - tig0008586:33019-33038 None:intergenic 15.0%
!! AATAAAATTAAAGGAAGAGA+GGG - tig0008586:22201-22220 None:intergenic 20.0%
!! AAATAAAATTAAAGGAAGAG+AGG - tig0008586:22202-22221 None:intergenic 20.0%
!!! AAGAAATAGTTTGAGTTTAA+CGG - tig0008586:22891-22910 None:intergenic 20.0%
!! TTATGAAAATAAGCTGAATA+TGG + tig0008586:23147-23166 Msa1346220:intron 20.0%
!!! GAATGTGATTAAATTGTTTT+AGG + tig0008586:23345-23364 Msa1346220:intron 20.0%
!! GTATGATTATAATTGAGAAT+GGG - tig0008586:23574-23593 None:intergenic 20.0%
!! AGTATGATTATAATTGAGAA+TGG - tig0008586:23575-23594 None:intergenic 20.0%
!! GAACATACTATATGTATATT+TGG - tig0008586:23643-23662 None:intergenic 20.0%
!!! ATATTGATAGTTTAAACTGT+GGG + tig0008586:23823-23842 Msa1346220:CDS 20.0%
!! ATCTTGAATTTCAAAAAATC+AGG + tig0008586:23876-23895 Msa1346220:CDS 20.0%
!! ACATCATATATTATGCAAAA+AGG - tig0008586:23948-23967 None:intergenic 20.0%
!! AATATATCTTCTGTTGTTAT+AGG + tig0008586:24275-24294 Msa1346220:intron 20.0%
!! ATATATCTTCTGTTGTTATA+GGG + tig0008586:24276-24295 Msa1346220:intron 20.0%
!!! TTTTGTTTCGTTTTTACTTT+GGG - tig0008586:25033-25052 None:intergenic 20.0%
!!! ATTTTGTTTCGTTTTTACTT+TGG - tig0008586:25034-25053 None:intergenic 20.0%
!! GAAATGTCCTAAAATATAAT+GGG - tig0008586:25151-25170 None:intergenic 20.0%
!! AGAAATGTCCTAAAATATAA+TGG - tig0008586:25152-25171 None:intergenic 20.0%
!!! TTCATTTTTCTCTCTTAATT+AGG - tig0008586:25405-25424 None:intergenic 20.0%
!! AAAAATGAAGTTCAGTATTT+AGG + tig0008586:25416-25435 Msa1346220:intron 20.0%
!! AATTTGTCTGAAAGAAAAAT+AGG - tig0008586:25561-25580 None:intergenic 20.0%
!! AAAACAACATAGTATTATGA+CGG + tig0008586:25759-25778 Msa1346220:intron 20.0%
!! CAAATAATTCCTTTATTGTT+TGG + tig0008586:26022-26041 Msa1346220:intron 20.0%
!!! AAACTTTTTCCAAACAATAA+AGG - tig0008586:26034-26053 None:intergenic 20.0%
!! AAAAGGTTTGATTAATAATC+TGG - tig0008586:26091-26110 None:intergenic 20.0%
!! CTGATGCTTAAAAATTTAAA+AGG - tig0008586:26108-26127 None:intergenic 20.0%
!! TAGATAATATCTATACAAAC+TGG + tig0008586:26311-26330 Msa1346220:CDS 20.0%
!! ATTGAGAACTTTATAAATGA+AGG + tig0008586:26451-26470 Msa1346220:CDS 20.0%
!!! AAATTTAATGTATGATGATG+AGG + tig0008586:26516-26535 Msa1346220:CDS 20.0%
!! TAAAAACAATACATTCATAC+AGG - tig0008586:26705-26724 None:intergenic 20.0%
!! AGAATAGATTGCAATTAAAT+AGG + tig0008586:26811-26830 Msa1346220:intron 20.0%
!! GAATAGATTGCAATTAAATA+GGG + tig0008586:26812-26831 Msa1346220:intron 20.0%
!!! AAGTATATGTGTTTTATTTG+TGG + tig0008586:26972-26991 Msa1346220:intron 20.0%
!!! AGCTTTAGAAATAACTAATT+TGG + tig0008586:27007-27026 Msa1346220:intron 20.0%
!!! GCTTTAGAAATAACTAATTT+GGG + tig0008586:27008-27027 Msa1346220:intron 20.0%
!!! AAGAAGTATTTACATGTTTT+AGG + tig0008586:27126-27145 Msa1346220:intron 20.0%
!! ACAATCAACAGAAATTAATA+TGG - tig0008586:27210-27229 None:intergenic 20.0%
!! CATTATTAGGAATAAAAGTT+GGG - tig0008586:27747-27766 None:intergenic 20.0%
!! AAAATATCAAGATGATTTCT+TGG + tig0008586:27797-27816 Msa1346220:intron 20.0%
!! TTTAATGATAACTGCTTTAA+TGG - tig0008586:28028-28047 None:intergenic 20.0%
!!! TATTTATTTTCTCTGGATTT+GGG - tig0008586:28304-28323 None:intergenic 20.0%
!!! TTATTTATTTTCTCTGGATT+TGG - tig0008586:28305-28324 None:intergenic 20.0%
!!! TTGTATTGGTTTGAAATTAT+TGG + tig0008586:28717-28736 Msa1346220:intron 20.0%
!!! CAAAACATTATTTTGTATCA+CGG + tig0008586:29277-29296 Msa1346220:intron 20.0%
!! AAAATCATAAATCTTTGGAT+TGG + tig0008586:29765-29784 Msa1346220:intron 20.0%
!!! TATTAGTGATGTATTTTAGA+GGG - tig0008586:29850-29869 None:intergenic 20.0%
!!! TTATTAGTGATGTATTTTAG+AGG - tig0008586:29851-29870 None:intergenic 20.0%
!!! CAACAATAATTTTTCTTCAT+TGG - tig0008586:30013-30032 None:intergenic 20.0%
!! GTAAAAAACATCATTTATGA+TGG + tig0008586:30168-30187 Msa1346220:intron 20.0%
!! TCAAAATCATTTCCAATAAA+AGG + tig0008586:30468-30487 Msa1346220:intron 20.0%
!!! TAAATACTTCTTCCTTTTAT+TGG - tig0008586:30483-30502 None:intergenic 20.0%
!!! AAAGGAAGAAGTATTTAAAA+AGG + tig0008586:30486-30505 Msa1346220:intron 20.0%
!!! TTTTCCAAAAACAATAATGT+AGG + tig0008586:30567-30586 Msa1346220:intron 20.0%
!!! ATGATATAACATTTTTCTGT+AGG + tig0008586:30839-30858 Msa1346220:intron 20.0%
!! AATAAAGAAATCATATCAAG+GGG + tig0008586:30902-30921 Msa1346220:CDS 20.0%
!! AAGAAGTTATGCTAAAATAT+GGG + tig0008586:31172-31191 Msa1346220:intron 20.0%
!!! ATACATGATGGAATTTTTAA+CGG - tig0008586:31916-31935 None:intergenic 20.0%
!!! CTTTTATAATTGACAAAATG+GGG - tig0008586:32726-32745 None:intergenic 20.0%
!! TCGAACAAAAAAAAAATACA+AGG - tig0008586:32815-32834 None:intergenic 20.0%
!!! TTGTATTTTTTTTTTGTTCG+AGG + tig0008586:32814-32833 Msa1346220:three_prime_UTR 20.0%
!!! TGTATTTTTTTTTTGTTCGA+GGG + tig0008586:32815-32834 Msa1346220:three_prime_UTR 20.0%
!!! AATCACTTTTTCTTCGATTT+TGG - tig0008586:22428-22447 None:intergenic 25.0%
! TTTGAATTTGAACCTATTAC+TGG + tig0008586:22499-22518 Msa1346220:CDS 25.0%
! CTCAAATATTTACTCAACAA+AGG - tig0008586:22659-22678 None:intergenic 25.0%
!!! TGTTTATGTTTGAGTTGAAT+TGG + tig0008586:22687-22706 Msa1346220:intron 25.0%
! GTAAAAAAGTTTGGGAAAAT+AGG + tig0008586:22733-22752 Msa1346220:intron 25.0%
!! ATTTTACACTAACATCCAAT+AGG - tig0008586:22845-22864 None:intergenic 25.0%
! CTAGTTTAATTAAGTGACAT+AGG + tig0008586:22966-22985 Msa1346220:intron 25.0%
!! TTATGTTGTTTATCCAAATC+AGG - tig0008586:22992-23011 None:intergenic 25.0%
! CAAAATAAGCCAATTCAAAT+AGG + tig0008586:23246-23265 Msa1346220:intron 25.0%
! ACATGGTAGTAAGATATAAT+TGG + tig0008586:23270-23289 Msa1346220:intron 25.0%
! TGTTCATATGATAAGCAATT+AGG - tig0008586:23310-23329 None:intergenic 25.0%
!!! TCTGCTTTCATTTTTCAAAT+TGG + tig0008586:23661-23680 Msa1346220:intron 25.0%
! AAAAAATTCTCGCATATTTG+AGG - tig0008586:23762-23781 None:intergenic 25.0%
! CACAGTTTAAACTATCAATA+TGG - tig0008586:23824-23843 None:intergenic 25.0%
!! CATATTGATAGTTTAAACTG+TGG + tig0008586:23822-23841 Msa1346220:CDS 25.0%
! TGCATAATATATGATGTTGA+TGG + tig0008586:23951-23970 Msa1346220:intron 25.0%
! CTGTAGTTAGTAATTATTGA+TGG + tig0008586:24052-24071 Msa1346220:intron 25.0%
! AACAGAAGATATATTGCTTT+GGG - tig0008586:24270-24289 None:intergenic 25.0%
! TATATCTTCTGTTGTTATAG+GGG + tig0008586:24277-24296 Msa1346220:intron 25.0%
!! TGATGCATGTTTAATTTACA+TGG + tig0008586:24303-24322 Msa1346220:intron 25.0%
! AAAATTTCATGGTTTATCCA+TGG - tig0008586:24344-24363 None:intergenic 25.0%
! CACTAAGTGTTAAAATTTCA+TGG - tig0008586:24355-24374 None:intergenic 25.0%
! AATACTTCTCGTATATCATT+TGG + tig0008586:24376-24395 Msa1346220:intron 25.0%
!!! TTTTTTTATCTCTGCTGAAA+TGG + tig0008586:24431-24450 Msa1346220:intron 25.0%
!! ATTCTTTTTCTTGACATGTA+GGG - tig0008586:24658-24677 None:intergenic 25.0%
!! TATTCTTTTTCTTGACATGT+AGG - tig0008586:24659-24678 None:intergenic 25.0%
!! TTGCATTGTTTAAAGTTTGA+CGG + tig0008586:24792-24811 Msa1346220:intron 25.0%
!!! TATTACACTTGCTTTTTATC+TGG + tig0008586:24903-24922 Msa1346220:intron 25.0%
! ACATTATACAATAGTTCATC+TGG - tig0008586:24986-25005 None:intergenic 25.0%
! GATGAACTATTGTATAATGT+AGG + tig0008586:24986-25005 Msa1346220:intron 25.0%
! GTAAAAACGAAACAAAATCA+TGG + tig0008586:25036-25055 Msa1346220:intron 25.0%
! TATTGAATTAGGAAAGCTTT+GGG - tig0008586:25509-25528 None:intergenic 25.0%
! GATGGAAAAAATATTACAAG+AGG - tig0008586:25701-25720 None:intergenic 25.0%
! ATAACGTTTGTACATAACTT+TGG + tig0008586:25886-25905 Msa1346220:intron 25.0%
!!! CTTTTTTGCCAATTTAAAAC+AGG + tig0008586:26412-26431 Msa1346220:intron 25.0%
!!! TTCCTTTTCCTGTTTTAAAT+TGG - tig0008586:26423-26442 None:intergenic 25.0%
!! GTATCTTATTTAGTGATTAG+TGG + tig0008586:26633-26652 Msa1346220:intron 25.0%
!!! TTTTAGTTGCTTCTTTATTG+TGG + tig0008586:26720-26739 Msa1346220:intron 25.0%
!! GTTGTATTCTTATTTATTGC+TGG + tig0008586:26764-26783 Msa1346220:intron 25.0%
! TGCAATTAAATAGGGTTATA+AGG + tig0008586:26820-26839 Msa1346220:intron 25.0%
! GAGAAATAGTCTAAATTACT+AGG - tig0008586:27078-27097 None:intergenic 25.0%
!! GAAAATGTATGTTTTCAGAA+TGG - tig0008586:27153-27172 None:intergenic 25.0%
! TGTTAATTAGATCTAAGTAG+CGG + tig0008586:27227-27246 Msa1346220:intron 25.0%
! ATAAAAGTTGGGTAAGAAAA+AGG - tig0008586:27736-27755 None:intergenic 25.0%
! GCATTATTAGGAATAAAAGT+TGG - tig0008586:27748-27767 None:intergenic 25.0%
!! TGTATTTTATTCACCAAAAG+GGG - tig0008586:27770-27789 None:intergenic 25.0%
!! GTGTATTTTATTCACCAAAA+GGG - tig0008586:27771-27790 None:intergenic 25.0%
!!! ATTGCTATTGTTTTTCTAGT+AGG + tig0008586:28053-28072 Msa1346220:intron 25.0%
!!! TTGCTATTGTTTTTCTAGTA+GGG + tig0008586:28054-28073 Msa1346220:intron 25.0%
! TAGTAGGGGAAATATTATAT+TGG + tig0008586:28069-28088 Msa1346220:intron 25.0%
!! TAAGATTAATGAGAAGCATA+GGG + tig0008586:28108-28127 Msa1346220:intron 25.0%
! TTTATGAGATCTATGAATCT+CGG + tig0008586:28269-28288 Msa1346220:intron 25.0%
! ATTACTAAAAGAGAATAGAC+AGG - tig0008586:28430-28449 None:intergenic 25.0%
!!! CTTAAATTTTTTTGACTCTG+AGG - tig0008586:28578-28597 None:intergenic 25.0%
! CTCAGAGTCAAAAAAATTTA+AGG + tig0008586:28576-28595 Msa1346220:intron 25.0%
! TGAAAATAAAACTAACATGG+AGG - tig0008586:28674-28693 None:intergenic 25.0%
!!! ATTGGTTTGAAATTATTGGT+TGG + tig0008586:28721-28740 Msa1346220:intron 25.0%
!!! TGTTTTTATTCCCCAAAATA+CGG + tig0008586:28886-28905 Msa1346220:intron 25.0%
!! ATAGTTAGTTACCGTATTTT+GGG - tig0008586:28900-28919 None:intergenic 25.0%
!! AATAGTTAGTTACCGTATTT+TGG - tig0008586:28901-28920 None:intergenic 25.0%
!! ATTGTTATCATTTTCAGTAG+AGG - tig0008586:28961-28980 None:intergenic 25.0%
! CTACTGAAAATGATAACAAT+TGG + tig0008586:28961-28980 Msa1346220:intron 25.0%
! AAAAGGGTAATAATTGCATT+TGG - tig0008586:29077-29096 None:intergenic 25.0%
! CAAATTTAACTGGACTATAA+GGG - tig0008586:29163-29182 None:intergenic 25.0%
! TCAAATTTAACTGGACTATA+AGG - tig0008586:29164-29183 None:intergenic 25.0%
! AGATGCATTTCAAATTTAAC+TGG - tig0008586:29173-29192 None:intergenic 25.0%
!! AGTTAAATTTGAAATGCATC+TGG + tig0008586:29172-29191 Msa1346220:intron 25.0%
! ATTAAAATCATTCATGCACA+TGG + tig0008586:29548-29567 Msa1346220:intron 25.0%
! TTTCTATGTTACAATCTACT+TGG + tig0008586:29601-29620 Msa1346220:intron 25.0%
!! ATGTTACTTATAGTCAAGAT+AGG + tig0008586:29737-29756 Msa1346220:intron 25.0%
!! TGTTACTTATAGTCAAGATA+GGG + tig0008586:29738-29757 Msa1346220:intron 25.0%
! GGATGAAAATCATAAATCTT+TGG + tig0008586:29760-29779 Msa1346220:intron 25.0%
!!! ATTAGTGATGTATTTTAGAG+GGG - tig0008586:29849-29868 None:intergenic 25.0%
! ACTTCAATTCATAATCCATA+AGG + tig0008586:29881-29900 Msa1346220:intron 25.0%
!! ATTTATGATGGAGATAAACA+TGG + tig0008586:30180-30199 Msa1346220:intron 25.0%
!! TTTATGATGGAGATAAACAT+GGG + tig0008586:30181-30200 Msa1346220:intron 25.0%
!! TTGCACAATCATATGATTTT+TGG - tig0008586:30358-30377 None:intergenic 25.0%
! TCGAATGAATAATTAGCATT+CGG - tig0008586:30732-30751 None:intergenic 25.0%
! CAAGAAGTTATGCTAAAATA+TGG + tig0008586:31171-31190 Msa1346220:intron 25.0%
! AATAATATACGTAGCAAGTT+TGG - tig0008586:31237-31256 None:intergenic 25.0%
!!! CTACGTATATTATTGATTTG+AGG + tig0008586:31243-31262 Msa1346220:intron 25.0%
! TTTGATGTAGTCAAAAAGTT+AGG - tig0008586:31421-31440 None:intergenic 25.0%
!! TGTTTCTTTCAAATTGCTTT+TGG + tig0008586:31582-31601 Msa1346220:intron 25.0%
! AATTGTACTATAAATCTTGC+AGG + tig0008586:31802-31821 Msa1346220:intron 25.0%
! ATTGTACTATAAATCTTGCA+GGG + tig0008586:31803-31822 Msa1346220:intron 25.0%
! ACCATATATGTGGTTAATAA+TGG + tig0008586:31829-31848 Msa1346220:intron 25.0%
! ACCATTATTAACCACATATA+TGG - tig0008586:31833-31852 None:intergenic 25.0%
!!! CAATCTACTTTTATACATGA+TGG - tig0008586:31928-31947 None:intergenic 25.0%
!! CTTGTAACTTGTAATGTATA+GGG - tig0008586:31998-32017 None:intergenic 25.0%
!! ACTTGTAACTTGTAATGTAT+AGG - tig0008586:31999-32018 None:intergenic 25.0%
! AAAGATTAAAAACACGTAAG+TGG - tig0008586:32052-32071 None:intergenic 25.0%
!! TTTAATTGACGGTTTTTACA+AGG + tig0008586:32069-32088 Msa1346220:intron 25.0%
! ATATTTCCTTTCTTTCTTAC+AGG + tig0008586:32093-32112 Msa1346220:intron 25.0%
! ATATAAACAATTTCGAGACA+AGG + tig0008586:32157-32176 Msa1346220:CDS 25.0%
! ATGATGAATAAAAAAAGCTC+TGG - tig0008586:32236-32255 None:intergenic 25.0%
! CTCAAATACAACATTCATAT+TGG - tig0008586:32472-32491 None:intergenic 25.0%
!! AATGGATATACTATTTCTCT+TGG + tig0008586:33025-33044 Msa1346220:three_prime_UTR 25.0%
! GTTTTTCTTGAATGAGATTG+AGG - tig0008586:22367-22386 None:intergenic 30.0%
!! TTTTTCTTCGATTTTGGTGT+CGG - tig0008586:22422-22441 None:intergenic 30.0%
GAAGAAAAAGTGATTCAAGA+AGG + tig0008586:22433-22452 Msa1346220:CDS 30.0%
TCAAATTCAAATTCTCCACT+GGG - tig0008586:22490-22509 None:intergenic 30.0%
TTCAAATTCAAATTCTCCAC+TGG - tig0008586:22491-22510 None:intergenic 30.0%
AATTTGAACCTATTACTGGT+TGG + tig0008586:22503-22522 Msa1346220:CDS 30.0%
!! AAGAAATGTGATGATGGTAA+AGG - tig0008586:22634-22653 None:intergenic 30.0%
AAGGATAAGAAATGTGATGA+TGG - tig0008586:22640-22659 None:intergenic 30.0%
! GAGAAATAGTTGATTCCTAT+TGG + tig0008586:22827-22846 Msa1346220:intron 30.0%
! CACTATGTTTAAAATCGTAG+AGG + tig0008586:22932-22951 Msa1346220:intron 30.0%
! TGTTTAAAATCGTAGAGGTA+TGG + tig0008586:22937-22956 Msa1346220:intron 30.0%
TTTGCTTTCATGAGCTATAT+TGG + tig0008586:23119-23138 Msa1346220:intron 30.0%
AAGTACTTATGTGAGTAGAA+AGG + tig0008586:23221-23240 Msa1346220:intron 30.0%
CAAATCATGACGCAATATTA+AGG + tig0008586:23451-23470 Msa1346220:intron 30.0%
GTAAAGTAGAAGAAATTCGA+AGG + tig0008586:23850-23869 Msa1346220:CDS 30.0%
TGCAAGTTTACTGAATTTCT+TGG - tig0008586:24016-24035 None:intergenic 30.0%
! GTAATTATTGATGGCTTCTA+TGG + tig0008586:24061-24080 Msa1346220:intron 30.0%
! TCTTGAACAATTTTCCTACT+TGG + tig0008586:24123-24142 Msa1346220:intron 30.0%
AAACTTCACAGTTTATGCAT+TGG - tig0008586:24152-24171 None:intergenic 30.0%
GAATGTTCTCTATAGGATAT+AGG - tig0008586:24204-24223 None:intergenic 30.0%
CAACAGAAGATATATTGCTT+TGG - tig0008586:24271-24290 None:intergenic 30.0%
! TATCTCCTCTTGTTATATGA+GGG + tig0008586:24489-24508 Msa1346220:intron 30.0%
AACAAAGAAAAGTAAGCACT+TGG - tig0008586:24719-24738 None:intergenic 30.0%
!! AGTGCTTACTTTTCTTTGTT+TGG + tig0008586:24719-24738 Msa1346220:CDS 30.0%
TACACACACACCAAAAAAAA+AGG - tig0008586:24828-24847 None:intergenic 30.0%
TTACCATTGAAAGACCAAAT+TGG - tig0008586:24857-24876 None:intergenic 30.0%
!!! CTTTTTATCTGGCCTTATAT+AGG + tig0008586:24914-24933 Msa1346220:intron 30.0%
GAATTGATCAAGCCTATATA+AGG - tig0008586:24929-24948 None:intergenic 30.0%
AACTATTGTATAATGTAGGC+TGG + tig0008586:24990-25009 Msa1346220:intron 30.0%
ACTATTGTATAATGTAGGCT+GGG + tig0008586:24991-25010 Msa1346220:intron 30.0%
GTATTGAATTAGGAAAGCTT+TGG - tig0008586:25510-25529 None:intergenic 30.0%
AGCTTTCCTAATTCAATACT+AGG + tig0008586:25511-25530 Msa1346220:intron 30.0%
GCTTTCCTAATTCAATACTA+GGG + tig0008586:25512-25531 Msa1346220:intron 30.0%
ATGACATTGCCAATAAATGT+AGG - tig0008586:25640-25659 None:intergenic 30.0%
GAAAAAATATTACAAGAGGC+TGG - tig0008586:25697-25716 None:intergenic 30.0%
! TGCTTTAACAACTAGTTTGA+TGG - tig0008586:25719-25738 None:intergenic 30.0%
ACAAACGTTATATGAAGTAC+TGG - tig0008586:25877-25896 None:intergenic 30.0%
! ATTATTTGAGACACTAGCAT+TGG - tig0008586:26010-26029 None:intergenic 30.0%
!!! CAGTTGTTAATTTTTTGTCC+AGG + tig0008586:26166-26185 Msa1346220:intron 30.0%
TAATATCTATACAAACTGGC+TGG + tig0008586:26315-26334 Msa1346220:CDS 30.0%
!! TTGAAAAGCAAAAGTACCTT+TGG - tig0008586:26356-26375 None:intergenic 30.0%
! TGCCAATTTAAAACAGGAAA+AGG + tig0008586:26418-26437 Msa1346220:intron 30.0%
! TCTTATTTAGTGATTAGTGG+TGG + tig0008586:26636-26655 Msa1346220:intron 30.0%
!! TTAGTGGTGGATATATTTGA+TGG + tig0008586:26649-26668 Msa1346220:intron 30.0%
CCAAACAAAAACTCTTCATT+TGG - tig0008586:26681-26700 None:intergenic 30.0%
! CCAAATGAAGAGTTTTTGTT+TGG + tig0008586:26678-26697 Msa1346220:intron 30.0%
! TGAAACATTGAATGTTTTGC+AGG + tig0008586:26846-26865 Msa1346220:intron 30.0%
AACAGATAAAAAACTGCCAA+CGG + tig0008586:26903-26922 Msa1346220:CDS 30.0%
GTTCTTATTGCATAGTAGAA+CGG - tig0008586:27340-27359 None:intergenic 30.0%
!!! TTCACTAACTGCTTCTTTTT+TGG + tig0008586:27369-27388 Msa1346220:intron 30.0%
CAATTAGTGTATACGGAAAT+TGG + tig0008586:27584-27603 Msa1346220:intron 30.0%
ATTTCATTATCTCTTTGTCC+TGG + tig0008586:27658-27677 Msa1346220:intron 30.0%
! GGTGTATTTTATTCACCAAA+AGG - tig0008586:27772-27791 None:intergenic 30.0%
!! TGCTATTGTTTTTCTAGTAG+GGG + tig0008586:28055-28074 Msa1346220:intron 30.0%
! CTAAGATTAATGAGAAGCAT+AGG + tig0008586:28107-28126 Msa1346220:intron 30.0%
! TTTGGAATCAAAAGCTTCAA+AGG - tig0008586:28143-28162 None:intergenic 30.0%
!! GAAGCTTTTGATTCCAAAAA+TGG + tig0008586:28145-28164 Msa1346220:intron 30.0%
ACTAAGAGATACATTGACAA+AGG + tig0008586:28194-28213 Msa1346220:intron 30.0%
CAGGTAGATTATATTGAAAC+AGG + tig0008586:28223-28242 Msa1346220:intron 30.0%
TTATATTGAAACAGGATGCT+AGG + tig0008586:28231-28250 Msa1346220:intron 30.0%
TTATGAGATCTATGAATCTC+GGG + tig0008586:28270-28289 Msa1346220:intron 30.0%
ATATAACAAACGCACTATCT+TGG + tig0008586:28448-28467 Msa1346220:intron 30.0%
TTGTGCTATAATTTACGTCA+TGG + tig0008586:28533-28552 Msa1346220:intron 30.0%
! TAGTTAGTTACCGTATTTTG+GGG - tig0008586:28899-28918 None:intergenic 30.0%
CGGTAACTAACTATTACTTT+CGG + tig0008586:28906-28925 Msa1346220:intron 30.0%
CAAAAGGTGAAGAAACTTTA+GGG + tig0008586:29050-29069 Msa1346220:intron 30.0%
AAAAGGTGAAGAAACTTTAG+GGG + tig0008586:29051-29070 Msa1346220:intron 30.0%
!!! GCAATTATTACCCTTTTTTG+AGG + tig0008586:29080-29099 Msa1346220:intron 30.0%
!!! GTTTTTAGCTCCTCAAAAAA+GGG - tig0008586:29093-29112 None:intergenic 30.0%
!!! TGTTTTTAGCTCCTCAAAAA+AGG - tig0008586:29094-29113 None:intergenic 30.0%
TTCCTCTCAAGTTTAAAAGT+AGG - tig0008586:29125-29144 None:intergenic 30.0%
! GTTAGGCTTTCTAAGTATTT+TGG + tig0008586:29217-29236 Msa1346220:intron 30.0%
!! ATCACGGTGTTTTATTGTTT+CGG + tig0008586:29465-29484 Msa1346220:intron 30.0%
TGCTGCTCAATTTAAGAATT+TGG + tig0008586:29624-29643 Msa1346220:intron 30.0%
GTTACTTATAGTCAAGATAG+GGG + tig0008586:29739-29758 Msa1346220:intron 30.0%
ACAATGAGGAAAAAGTTGTT+TGG + tig0008586:30112-30131 Msa1346220:intron 30.0%
CAATGAGGAAAAAGTTGTTT+GGG + tig0008586:30113-30132 Msa1346220:intron 30.0%
ATCATATCCAGAATATGATC+AGG + tig0008586:30320-30339 Msa1346220:intron 30.0%
CATGCTTAAAGTCATTATTG+TGG + tig0008586:30394-30413 Msa1346220:intron 30.0%
AGAGATTTCAAAAGAAGGAA+AGG - tig0008586:30431-30450 None:intergenic 30.0%
TCCAAAAACAATAATGTAGG+AGG + tig0008586:30570-30589 Msa1346220:intron 30.0%
! TCCTCCTACATTATTGTTTT+TGG - tig0008586:30574-30593 None:intergenic 30.0%
CTAATGTGCATAACCTATAA+AGG - tig0008586:30603-30622 None:intergenic 30.0%
! TTTTCATGCTACCATTTGAA+TGG + tig0008586:30678-30697 Msa1346220:intron 30.0%
GCAGTTAATTACCATTCAAA+TGG - tig0008586:30692-30711 None:intergenic 30.0%
TAATAGGTATGGAATCATCT+AGG - tig0008586:31085-31104 None:intergenic 30.0%
AAGTTATGCTAAAATATGGG+TGG + tig0008586:31175-31194 Msa1346220:intron 30.0%
TTTATATGCCTATAGCTTGA+AGG - tig0008586:31205-31224 None:intergenic 30.0%
!! TGGTTCTAGAGTTGATAAAT+TGG - tig0008586:31298-31317 None:intergenic 30.0%
GCAAAAGAATAACAAAAGCA+AGG - tig0008586:31609-31628 None:intergenic 30.0%
ACTAACAACCTCGATATTAA+CGG - tig0008586:31642-31661 None:intergenic 30.0%
TATAGTACAATTCAACACAC+TGG - tig0008586:31794-31813 None:intergenic 30.0%
! TCTCTGAAGAAAAGAAATCA+AGG + tig0008586:31880-31899 Msa1346220:intron 30.0%
! AGAAAAGAAATCAAGGTGTT+AGG + tig0008586:31887-31906 Msa1346220:intron 30.0%
ATTAAAAACACGTAAGTGGA+AGG - tig0008586:32048-32067 None:intergenic 30.0%
GAGAAAAGTAGTTGTATGAA+AGG - tig0008586:32272-32291 None:intergenic 30.0%
TATTGCCATAGCAAAATTGA+AGG + tig0008586:32397-32416 Msa1346220:CDS 30.0%
GAGTAGTACAGTTACAAAAA+TGG + tig0008586:32489-32508 Msa1346220:intron 30.0%
AATAAAATCTCAGGTAGAGA+GGG - tig0008586:32568-32587 None:intergenic 30.0%
TAATAAAATCTCAGGTAGAG+AGG - tig0008586:32569-32588 None:intergenic 30.0%
! TCTCTACCTGAGATTTTATT+AGG + tig0008586:32568-32587 Msa1346220:CDS 30.0%
!! TGGAATCATTTTTCGTTCAT+TGG + tig0008586:32681-32700 Msa1346220:CDS 30.0%
!! ATCATTTTTCGTTCATTGGA+AGG + tig0008586:32685-32704 Msa1346220:CDS 30.0%
ATAGTAAGAATACATATGCC+TGG + tig0008586:32938-32957 Msa1346220:three_prime_UTR 30.0%
!! CTATTTCTCTTGGTACTTTT+TGG + tig0008586:33035-33054 Msa1346220:three_prime_UTR 30.0%
!! ATGATGATGATAAGGTGTTG+CGG - tig0008586:22291-22310 None:intergenic 35.0%
! CGATGATGATGATGATGATA+AGG - tig0008586:22299-22318 None:intergenic 35.0%
AAATTCCTCCAACCAGTAAT+AGG - tig0008586:22514-22533 None:intergenic 35.0%
!! TGATGATGGTAAAGGAAAGA+AGG - tig0008586:22626-22645 None:intergenic 35.0%
! ACTATTTCTCCACCTCTATT+AGG - tig0008586:22817-22836 None:intergenic 35.0%
! TAAAATCGTAGAGGTATGGT+AGG + tig0008586:22941-22960 Msa1346220:intron 35.0%
TACCATGTGCCTATTTGAAT+TGG - tig0008586:23258-23277 None:intergenic 35.0%
! TTGATAGTTTAAACTGTGGG+TGG + tig0008586:23826-23845 Msa1346220:CDS 35.0%
TGATAGTTTAAACTGTGGGT+GGG + tig0008586:23827-23846 Msa1346220:CDS 35.0%
CTCTCTTGAATGTTCTCTAT+AGG - tig0008586:24211-24230 None:intergenic 35.0%
TTTATCCATGGCTTATGCAT+TGG - tig0008586:24332-24351 None:intergenic 35.0%
AAAAAGGAACCTTCTACTGA+AGG - tig0008586:24457-24476 None:intergenic 35.0%
!! GATACATTGATTCGGGAAAA+AGG - tig0008586:24473-24492 None:intergenic 35.0%
!! AAGAGGAGATACATTGATTC+GGG - tig0008586:24480-24499 None:intergenic 35.0%
! CAAGAGGAGATACATTGATT+CGG - tig0008586:24481-24500 None:intergenic 35.0%
! GTATCTCCTCTTGTTATATG+AGG + tig0008586:24488-24507 Msa1346220:intron 35.0%
TTCATCCCTCATATAACAAG+AGG - tig0008586:24497-24516 None:intergenic 35.0%
!!! GATGAAGCCTGTTATTTTCT+GGG + tig0008586:24511-24530 Msa1346220:intron 35.0%
TCACAATCCCAGAAAATAAC+AGG - tig0008586:24521-24540 None:intergenic 35.0%
AAGTATCAATGCACGTTAGA+GGG - tig0008586:24599-24618 None:intergenic 35.0%
! TGATACTTGAGTTTGCTTGT+AGG + tig0008586:24611-24630 Msa1346220:intron 35.0%
!! GCTTGTAGGAAAATTTGTTG+TGG + tig0008586:24625-24644 Msa1346220:intron 35.0%
AAGAAAAGTAAGCACTTGGA+GGG - tig0008586:24715-24734 None:intergenic 35.0%
AAAGAAAAGTAAGCACTTGG+AGG - tig0008586:24716-24735 None:intergenic 35.0%
TGTGTGTATGATCTCCAATT+TGG + tig0008586:24840-24859 Msa1346220:intron 35.0%
! TCTCCAATTTGGTCTTTCAA+TGG + tig0008586:24851-24870 Msa1346220:intron 35.0%
GTCTTTCAATGGTAATTTCG+AGG + tig0008586:24862-24881 Msa1346220:intron 35.0%
ATAGTTCATCTGGTGTCTTT+GGG - tig0008586:24976-24995 None:intergenic 35.0%
AATAGTTCATCTGGTGTCTT+TGG - tig0008586:24977-24996 None:intergenic 35.0%
!! GTTTTTACTTTGGGTTACCA+TGG - tig0008586:25024-25043 None:intergenic 35.0%
! TGACACCCTAGTATTGAATT+AGG - tig0008586:25520-25539 None:intergenic 35.0%
! TAGGGTGTCAAATGATACAT+TGG + tig0008586:25530-25549 Msa1346220:intron 35.0%
! AGGGTGTCAAATGATACATT+GGG + tig0008586:25531-25550 Msa1346220:intron 35.0%
CAAATTAGATCTGACCCAAA+TGG + tig0008586:25575-25594 Msa1346220:intron 35.0%
CAATAAATGTAGGACCAATC+TGG - tig0008586:25630-25649 None:intergenic 35.0%
! CAGATTGGTCCTACATTTAT+TGG + tig0008586:25628-25647 Msa1346220:intron 35.0%
ATCCTTGTAAGAAACTTACC+TGG + tig0008586:25847-25866 Msa1346220:intron 35.0%
TACCAGGTAAGTTTCTTACA+AGG - tig0008586:25852-25871 None:intergenic 35.0%
TCAGTACAAGACTTAACTTC+AGG - tig0008586:25935-25954 None:intergenic 35.0%
!! CCTATTTTATCTAAAACGCC+TGG - tig0008586:26187-26206 None:intergenic 35.0%
!! CCAGGCGTTTTAGATAAAAT+AGG + tig0008586:26184-26203 Msa1346220:intron 35.0%
! CTCACAATTTTCATCAGACA+TGG - tig0008586:26275-26294 None:intergenic 35.0%
!! AGTTGATAAGCTGAAAGAAG+AGG + tig0008586:26483-26502 Msa1346220:CDS 35.0%
! GTTGATAAGCTGAAAGAAGA+GGG + tig0008586:26484-26503 Msa1346220:CDS 35.0%
TTAGTGTATACGGAAATTGG+AGG + tig0008586:27587-27606 Msa1346220:intron 35.0%
! ATTCCTAATAATGCCCCTTT+TGG + tig0008586:27754-27773 Msa1346220:intron 35.0%
! TTCTTGGTTTGATTGAACAC+AGG + tig0008586:27813-27832 Msa1346220:intron 35.0%
AAATGGACACTTGGAATTTC+AGG + tig0008586:27854-27873 Msa1346220:CDS 35.0%
CTCATTAATCTTAGTGACAC+CGG - tig0008586:28101-28120 None:intergenic 35.0%
!! CAATACTGTATGGCCATTTT+TGG - tig0008586:28161-28180 None:intergenic 35.0%
CGAAAGCAAACAATACTGTA+TGG - tig0008586:28171-28190 None:intergenic 35.0%
ACATGAATGAAGAGTTCTGT+AGG - tig0008586:28336-28355 None:intergenic 35.0%
!!! TAGACAGGTTTTATTGCTGT+TGG - tig0008586:28415-28434 None:intergenic 35.0%
AACAGTATCGTAGATGAACA+CGG - tig0008586:28477-28496 None:intergenic 35.0%
ATTATCAGAATTGACAGTCC+TGG + tig0008586:28604-28623 Msa1346220:CDS 35.0%
TACCAGAACTTACAAATCAG+AGG - tig0008586:28644-28663 None:intergenic 35.0%
!! TCCACTTTTGGTCCATTTTA+CGG + tig0008586:28988-29007 Msa1346220:intron 35.0%
! CCTAAAGTTTCTTCACCTTT+TGG - tig0008586:29052-29071 None:intergenic 35.0%
CCAAAAGGTGAAGAAACTTT+AGG + tig0008586:29049-29068 Msa1346220:intron 35.0%
!! AGCCTACTTTTAAACTTGAG+AGG + tig0008586:29120-29139 Msa1346220:intron 35.0%
!! TGCATCTGGAATTTTTACCA+TGG + tig0008586:29186-29205 Msa1346220:intron 35.0%
!! TCTGGAATTTTTACCATGGA+TGG + tig0008586:29190-29209 Msa1346220:intron 35.0%
TTACCATGGATGGAATTGTT+AGG + tig0008586:29200-29219 Msa1346220:intron 35.0%
! TATTTTGTATCACGGTGCTT+AGG + tig0008586:29285-29304 Msa1346220:intron 35.0%
TTAGGATGTGGAGAGAAATT+CGG + tig0008586:29303-29322 Msa1346220:intron 35.0%
AAAACCAGTCATTGCTTCAA+TGG + tig0008586:29340-29359 Msa1346220:CDS 35.0%
! CTTACGTTAACTGGTTCAAT+TGG + tig0008586:29428-29447 Msa1346220:CDS 35.0%
TTGTTTCGGTAGGTGAATAT+AGG + tig0008586:29479-29498 Msa1346220:intron 35.0%
AAAATCATTCATGCACATGG+TGG + tig0008586:29551-29570 Msa1346220:intron 35.0%
CAATGATCAGTCTCAGTAAA+TGG + tig0008586:29668-29687 Msa1346220:intron 35.0%
!!! TCTCAGTTTTGTTCTCCTTA+TGG - tig0008586:29899-29918 None:intergenic 35.0%
TCACTGTACAAAATGAACAG+TGG + tig0008586:30043-30062 Msa1346220:intron 35.0%
ATGACACAAGAGAAACAATG+AGG + tig0008586:30098-30117 Msa1346220:intron 35.0%
ATGGAGATAAACATGGGTTT+CGG + tig0008586:30187-30206 Msa1346220:intron 35.0%
GGTTTCAACAATTGGATTTC+TGG + tig0008586:30208-30227 Msa1346220:intron 35.0%
! TTCAACAATTGGATTTCTGG+TGG + tig0008586:30211-30230 Msa1346220:intron 35.0%
ATGATCTCACCAAATTGTGT+AGG - tig0008586:30305-30324 None:intergenic 35.0%
AAGCATGATAGTCAAAACTG+TGG - tig0008586:30381-30400 None:intergenic 35.0%
GCTGAAGAGATTTCAAAAGA+AGG - tig0008586:30436-30455 None:intergenic 35.0%
!! TGGAAAAAGCATTGTAGAAC+AGG - tig0008586:30554-30573 None:intergenic 35.0%
GCATTCGGCTATATATCATT+TGG - tig0008586:30717-30736 None:intergenic 35.0%
CTAATTATTCATTCGACCTC+TGG + tig0008586:30736-30755 Msa1346220:intron 35.0%
TTATTTAGTATCTCAGCTGC+CGG + tig0008586:30976-30995 Msa1346220:intron 35.0%
! TCGTTGGGTTAGAATCTATT+TGG - tig0008586:31046-31065 None:intergenic 35.0%
GATTCTAACCCAACGAAAAT+TGG + tig0008586:31050-31069 Msa1346220:intron 35.0%
! AAACAGCATTTTGTGTACTC+AGG - tig0008586:31567-31586 None:intergenic 35.0%
!! ATATCGAGGTTGTTAGTCTT+TGG + tig0008586:31645-31664 Msa1346220:intron 35.0%
TAATTAGTCGATCTCCATCT+TGG + tig0008586:31742-31761 Msa1346220:intron 35.0%
ACACACTGGAGAAAAGAATT+AGG - tig0008586:31780-31799 None:intergenic 35.0%
TACAAGTTACAAGTTCAACC+TGG + tig0008586:32005-32024 Msa1346220:intron 35.0%
ACAAGTTACAAGTTCAACCT+GGG + tig0008586:32006-32025 Msa1346220:intron 35.0%
ATATGCATTCTGTGCAGATT+TGG - tig0008586:32141-32160 None:intergenic 35.0%
AGAACATACAGTCATAGATC+TGG - tig0008586:32192-32211 None:intergenic 35.0%
!! ACAACTACTTTTCTCAACCT+AGG + tig0008586:32277-32296 Msa1346220:intron 35.0%
!! ATTTTGCTATGGCAATAGCT+CGG - tig0008586:32394-32413 None:intergenic 35.0%
!!! ATTGGCCTTCAATTTTGCTA+TGG - tig0008586:32405-32424 None:intergenic 35.0%
TTAAAATCTACAGGGAACTG+AGG - tig0008586:32753-32772 None:intergenic 35.0%
CTTACTCGCCCATTTAATAA+TGG + tig0008586:33007-33026 Msa1346220:three_prime_UTR 35.0%
!! TCTCTTGGTACTTTTTGGTA+CGG + tig0008586:33040-33059 Msa1346220:three_prime_UTR 35.0%
AATTAAAGGAAGAGAGGGAG+AGG - tig0008586:22196-22215 None:intergenic 40.0%
! TTGAACCTATTACTGGTTGG+AGG + tig0008586:22506-22525 Msa1346220:CDS 40.0%
TTGGAGGAATTTCGTCGTTA+AGG + tig0008586:22522-22541 Msa1346220:CDS 40.0%
GTTCTTACAATGAAGCTTCG+TGG + tig0008586:22592-22611 Msa1346220:CDS 40.0%
GTAAAGGAAAGAAGGAAACC+TGG - tig0008586:22618-22637 None:intergenic 40.0%
! AGGTGATTTGGCAGAATACA+CGG - tig0008586:22797-22816 None:intergenic 40.0%
TCTGCCAAATCACCTAATAG+AGG + tig0008586:22802-22821 Msa1346220:intron 40.0%
TCCACCTCTATTAGGTGATT+TGG - tig0008586:22809-22828 None:intergenic 40.0%
TAAGTGACATAGGCCTGATT+TGG + tig0008586:22976-22995 Msa1346220:intron 40.0%
AGCCAATTCAAATAGGCACA+TGG + tig0008586:23253-23272 Msa1346220:intron 40.0%
AGTGAAGAGTAGATTCTCTC+CGG + tig0008586:23725-23744 Msa1346220:CDS 40.0%
! ATTTGAGGTAGAGAAAGTCC+CGG - tig0008586:23747-23766 None:intergenic 40.0%
CCTATGATCCTCGAATTTCT+GGG + tig0008586:23790-23809 Msa1346220:CDS 40.0%
CTATGATCCTCGAATTTCTG+GGG + tig0008586:23791-23810 Msa1346220:CDS 40.0%
GATAGTTTAAACTGTGGGTG+GGG + tig0008586:23828-23847 Msa1346220:CDS 40.0%
!!! GGATGAAGCCTGTTATTTTC+TGG + tig0008586:24510-24529 Msa1346220:intron 40.0%
CAAGTATCAATGCACGTTAG+AGG - tig0008586:24600-24619 None:intergenic 40.0%
AGAAAAGTAAGCACTTGGAG+GGG - tig0008586:24714-24733 None:intergenic 40.0%
! TGGTAATTTCGAGGTTTTCG+TGG + tig0008586:24871-24890 Msa1346220:intron 40.0%
! GGTAATTTCGAGGTTTTCGT+GGG + tig0008586:24872-24891 Msa1346220:intron 40.0%
ATCAACTGACCAAACCAGAT+TGG + tig0008586:25613-25632 Msa1346220:intron 40.0%
AATGTAGGACCAATCTGGTT+TGG - tig0008586:25625-25644 None:intergenic 40.0%
! AGTATTATGACGGAGAGAGT+AGG + tig0008586:25769-25788 Msa1346220:intron 40.0%
TATAGAAGGGGAATGATACC+TGG + tig0008586:25792-25811 Msa1346220:intron 40.0%
TACAGAATTACCAGACTACC+AGG - tig0008586:25813-25832 None:intergenic 40.0%
!! ATATGAAGTACTGGACTACC+AGG - tig0008586:25868-25887 None:intergenic 40.0%
! TTGAGACACTAGCATTGGAA+TGG - tig0008586:26005-26024 None:intergenic 40.0%
! ATTGGCAAGTACAAAAGTGC+AGG + tig0008586:26229-26248 Msa1346220:CDS 40.0%
GATAAAGTCTCTTCTGCCAA+AGG + tig0008586:26337-26356 Msa1346220:CDS 40.0%
ACGGGTAGAAATTTCTTCAG+AGG + tig0008586:26932-26951 Msa1346220:intron 40.0%
!! GATCTAAGTAGCGGATTTCT+AGG + tig0008586:27236-27255 Msa1346220:intron 40.0%
!! TGGAAGATGACGGAATCAAT+AGG - tig0008586:27292-27311 None:intergenic 40.0%
ATGCACTATGTGGAAGATGA+CGG - tig0008586:27302-27321 None:intergenic 40.0%
!! TCACCAAAAGGGGCATTATT+AGG - tig0008586:27760-27779 None:intergenic 40.0%
TTGAACACAGGAAATACTCC+CGG + tig0008586:27825-27844 Msa1346220:intron 40.0%
AAGAACTGATAGCCATCATC+CGG + tig0008586:27882-27901 Msa1346220:CDS 40.0%
ACATTGACAAAGGCAAGAAC+AGG + tig0008586:28204-28223 Msa1346220:intron 40.0%
! TGCCTCTGATTTGTAAGTTC+TGG + tig0008586:28639-28658 Msa1346220:intron 40.0%
! ACAATTGGTCACTCCACTTT+TGG + tig0008586:28976-28995 Msa1346220:intron 40.0%
! TTTCTGAGAATGGCCACAAT+TGG - tig0008586:29022-29041 None:intergenic 40.0%
!! TGGTCCTTCTTTTCTGAGAA+TGG - tig0008586:29032-29051 None:intergenic 40.0%
CTCAGAAAAGAAGGACCAAA+AGG + tig0008586:29034-29053 Msa1346220:intron 40.0%
AAGCCTAACAATTCCATCCA+TGG - tig0008586:29206-29225 None:intergenic 40.0%
GCAGAAAGTCTTACGTTAAC+TGG + tig0008586:29419-29438 Msa1346220:CDS 40.0%
! GTTAACTGGTTCAATTGGAG+TGG + tig0008586:29433-29452 Msa1346220:CDS 40.0%
!! CGGTGTTTTATTGTTTCGGT+AGG + tig0008586:29469-29488 Msa1346220:intron 40.0%
GGTAGGTGAATATAGGAGAA+GGG + tig0008586:29486-29505 Msa1346220:intron 40.0%
!! AGAATTTGGAAGCCTTGTTG+AGG + tig0008586:29638-29657 Msa1346220:intron 40.0%
GAGAACAAAACTGAGAACAG+AGG + tig0008586:29903-29922 Msa1346220:intron 40.0%
CATGTGTGACAGTGTTTCAT+GGG - tig0008586:30081-30100 None:intergenic 40.0%
TCATGTGTGACAGTGTTTCA+TGG - tig0008586:30082-30101 None:intergenic 40.0%
GTTGTTTGGGAAGAAATGCT+TGG + tig0008586:30126-30145 Msa1346220:intron 40.0%
TGGGTTTCGGTTTCAACAAT+TGG + tig0008586:30200-30219 Msa1346220:intron 40.0%
!! TGGTAAACCTGCTTTTGGTT+AGG + tig0008586:30231-30250 Msa1346220:intron 40.0%
CGCAATGATCCTACACAATT+TGG + tig0008586:30293-30312 Msa1346220:intron 40.0%
ACACGATCCTGATCATATTC+TGG - tig0008586:30330-30349 None:intergenic 40.0%
AGAATATGATCAGGATCGTG+TGG + tig0008586:30329-30348 Msa1346220:intron 40.0%
GAATATGATCAGGATCGTGT+GGG + tig0008586:30330-30349 Msa1346220:intron 40.0%
AAAGAAGGAAAGGTCGCTAT+AGG - tig0008586:30421-30440 None:intergenic 40.0%
! TGTAGAACAGGTTTTCCTCT+CGG - tig0008586:30542-30561 None:intergenic 40.0%
AGGAGGAAATCTGCCTTTAT+AGG + tig0008586:30587-30606 Msa1346220:intron 40.0%
GTACTGTTGTTGATCTCTGT+AGG + tig0008586:30649-30668 Msa1346220:intron 40.0%
!! ATTCGACCTCTGGAATAATG+AGG + tig0008586:30746-30765 Msa1346220:intron 40.0%
TCTTCTCATACAGTTTCGCT+AGG - tig0008586:30874-30893 None:intergenic 40.0%
GCGAAACTGTATGAGAAGAT+TGG + tig0008586:30875-30894 Msa1346220:CDS 40.0%
!! TATTGATTTGAGGACCTCTC+AGG + tig0008586:31253-31272 Msa1346220:intron 40.0%
!! ATTGATTTGAGGACCTCTCA+GGG + tig0008586:31254-31273 Msa1346220:intron 40.0%
AGTGCAAACTGCAAACACAT+TGG - tig0008586:31318-31337 None:intergenic 40.0%
! AGCATTTTGTGTACTCAGGT+GGG - tig0008586:31563-31582 None:intergenic 40.0%
GGCATATATCCAAACCAAGA+TGG - tig0008586:31759-31778 None:intergenic 40.0%
CAAGTTACAAGTTCAACCTG+GGG + tig0008586:32007-32026 Msa1346220:intron 40.0%
TAAGTGGAAGGAAGAACTCT+CGG - tig0008586:32036-32055 None:intergenic 40.0%
!! ACTACTTTTCTCAACCTAGG+TGG + tig0008586:32280-32299 Msa1346220:intron 40.0%
!! CATGGTTTGGTTGATGCTAT+TGG + tig0008586:32359-32378 Msa1346220:CDS 40.0%
!! TTTTGCTATGGCAATAGCTC+GGG - tig0008586:32393-32412 None:intergenic 40.0%
ATTGAAGGCCAATATACCTC+AGG + tig0008586:32412-32431 Msa1346220:CDS 40.0%
ATATCTCCACAACAGTTACC+TGG - tig0008586:32534-32553 None:intergenic 40.0%
! CTGAGATTTTATTAGGCGCA+CGG + tig0008586:32575-32594 Msa1346220:CDS 40.0%
TTTCTGATGGAGTTCAAGCT+AGG + tig0008586:32653-32672 Msa1346220:CDS 40.0%
AGTGAAGTGATGAGCTGACA+AGG - tig0008586:22145-22164 None:intergenic 45.0%
!! ATGATGATAAGGTGTTGCGG+CGG - tig0008586:22288-22307 None:intergenic 45.0%
!!! TTCTTCGATTTTGGTGTCGG+AGG - tig0008586:22419-22438 None:intergenic 45.0%
GCTGATGAAGATTATCCCAG+TGG + tig0008586:22472-22491 Msa1346220:CDS 45.0%
AGATGCTCATTGCGTATCCA+TGG + tig0008586:22548-22567 Msa1346220:CDS 45.0%
GATGCTCATTGCGTATCCAT+GGG + tig0008586:22549-22568 Msa1346220:CDS 45.0%
GCCAAATCACCTAATAGAGG+TGG + tig0008586:22805-22824 Msa1346220:intron 45.0%
AAGGTTGTTGCCTTGTGAGT+TGG + tig0008586:23470-23489 Msa1346220:intron 45.0%
TAGAAACAGCTTTCCGCTTG+CGG + tig0008586:23512-23531 Msa1346220:intron 45.0%
AATGGGTGATTAAGCACACG+AGG - tig0008586:23557-23576 None:intergenic 45.0%
GTGAAGAGTAGATTCTCTCC+GGG + tig0008586:23726-23745 Msa1346220:CDS 45.0%
GCCTATGATCCTCGAATTTC+TGG + tig0008586:23789-23808 Msa1346220:CDS 45.0%
CCCAGAAATTCGAGGATCAT+AGG - tig0008586:23793-23812 None:intergenic 45.0%
AGATAGACCCCAGAAATTCG+AGG - tig0008586:23801-23820 None:intergenic 45.0%
! TTATGCATTGGCAGCCAAGT+AGG - tig0008586:24140-24159 None:intergenic 45.0%
CTGAAATGGCCTTCAGTAGA+AGG + tig0008586:24445-24464 Msa1346220:intron 45.0%
CTGGGATTGTGATGTAACTG+AGG + tig0008586:24529-24548 Msa1346220:intron 45.0%
! ATTTCGAGGTTTTCGTGGGA+TGG + tig0008586:24876-24895 Msa1346220:intron 45.0%
! TTTCGAGGTTTTCGTGGGAT+GGG + tig0008586:24877-24896 Msa1346220:intron 45.0%
TGTATAATGTAGGCTGGGTC+AGG + tig0008586:24996-25015 Msa1346220:intron 45.0%
TAGATCTGACCCAAATGGCT+TGG + tig0008586:25580-25599 Msa1346220:intron 45.0%
AGATCTGACCCAAATGGCTT+GGG + tig0008586:25581-25600 Msa1346220:intron 45.0%
TTACAAGAGGCTGGAACTGA+TGG - tig0008586:25688-25707 None:intergenic 45.0%
ACGGAGAGAGTAGGTATAGA+AGG + tig0008586:25778-25797 Msa1346220:intron 45.0%
CGGAGAGAGTAGGTATAGAA+GGG + tig0008586:25779-25798 Msa1346220:intron 45.0%
GGAGAGAGTAGGTATAGAAG+GGG + tig0008586:25780-25799 Msa1346220:intron 45.0%
AATAGGAGTTGAACCGCAAG+TGG + tig0008586:26201-26220 Msa1346220:CDS 45.0%
TTGCCAATCCTTTCCACTTG+CGG - tig0008586:26217-26236 None:intergenic 45.0%
GCAGGTTACTGACATGTTGA+AGG + tig0008586:26864-26883 Msa1346220:intron 45.0%
GACATGTTGAAGGAGAGACT+TGG + tig0008586:26874-26893 Msa1346220:CDS 45.0%
AAACTGCCAACGGTCGATTA+CGG + tig0008586:26913-26932 Msa1346220:CDS 45.0%
TCCACCTCTATGCTTCAACA+GGG + tig0008586:27174-27193 Msa1346220:intron 45.0%
ACATCCCTGTTGAAGCATAG+AGG - tig0008586:27181-27200 None:intergenic 45.0%
AGCTGCAATGATGCACTATG+TGG - tig0008586:27312-27331 None:intergenic 45.0%
! CTTTGTCCTGGTTCTTTCTG+TGG + tig0008586:27670-27689 Msa1346220:intron 45.0%
CATAAGCCACAGAAAGAACC+AGG - tig0008586:27679-27698 None:intergenic 45.0%
TGAACACAGGAAATACTCCC+GGG + tig0008586:27826-27845 Msa1346220:intron 45.0%
! AATACTCCCGGGTTAGGAAA+TGG + tig0008586:27837-27856 Msa1346220:CDS 45.0%
AAGTGTCCATTTCCTAACCC+GGG - tig0008586:27846-27865 None:intergenic 45.0%
CAAGTGTCCATTTCCTAACC+CGG - tig0008586:27847-27866 None:intergenic 45.0%
TGGACACTTGGAATTTCAGG+TGG + tig0008586:27857-27876 Msa1346220:CDS 45.0%
AGAACTGATAGCCATCATCC+GGG + tig0008586:27883-27902 Msa1346220:CDS 45.0%
!! AGGGAGCATTAGTCGAGTTA+AGG + tig0008586:27910-27929 Msa1346220:CDS 45.0%
!! GGGAGCATTAGTCGAGTTAA+GGG + tig0008586:27911-27930 Msa1346220:CDS 45.0%
! CAGTTAAGTGTCTCTAGCTC+AGG + tig0008586:27935-27954 Msa1346220:CDS 45.0%
ATCAGAATTGACAGTCCTGG+AGG + tig0008586:28607-28626 Msa1346220:CDS 45.0%
GCCGTAAAATGGACCAAAAG+TGG - tig0008586:28992-29011 None:intergenic 45.0%
! TTTGGTCCATTTTACGGCTG+AGG + tig0008586:28994-29013 Msa1346220:intron 45.0%
! TTGGTCCATTTTACGGCTGA+GGG + tig0008586:28995-29014 Msa1346220:intron 45.0%
GTGGCCATTCTCAGAAAAGA+AGG + tig0008586:29025-29044 Msa1346220:intron 45.0%
TCAGCCATTGAAGCAATGAC+TGG - tig0008586:29347-29366 None:intergenic 45.0%
CATTGCTTCAATGGCTGATG+TGG + tig0008586:29349-29368 Msa1346220:CDS 45.0%
AGCAAGTGGAGGATACTACA+TGG + tig0008586:29373-29392 Msa1346220:CDS 45.0%
TGGAGGATACTACATGGCAA+TGG + tig0008586:29379-29398 Msa1346220:CDS 45.0%
GGAGGATACTACATGGCAAT+GGG + tig0008586:29380-29399 Msa1346220:CDS 45.0%
CGGTAGGTGAATATAGGAGA+AGG + tig0008586:29485-29504 Msa1346220:intron 45.0%
CTGTCGAGACACTAAAGCAA+TGG - tig0008586:29698-29717 None:intergenic 45.0%
!! CAGCATCAAAGGTTGGTTTG+GGG - tig0008586:29978-29997 None:intergenic 45.0%
!! GCAGCATCAAAGGTTGGTTT+GGG - tig0008586:29979-29998 None:intergenic 45.0%
! TGCAGCATCAAAGGTTGGTT+TGG - tig0008586:29980-29999 None:intergenic 45.0%
ACTACTGCAGCATCAAAGGT+TGG - tig0008586:29985-30004 None:intergenic 45.0%
TCGTACTACTGCAGCATCAA+AGG - tig0008586:29989-30008 None:intergenic 45.0%
TGGGAAGAAATGCTTGGAAG+AGG + tig0008586:30132-30151 Msa1346220:intron 45.0%
GGGAAGAAATGCTTGGAAGA+GGG + tig0008586:30133-30152 Msa1346220:intron 45.0%
TTGGAAGAGGGTTAGATAGC+AGG + tig0008586:30145-30164 Msa1346220:intron 45.0%
TGGAAGAGGGTTAGATAGCA+GGG + tig0008586:30146-30165 Msa1346220:intron 45.0%
! TCTGGTGGTAAACCTGCTTT+TGG + tig0008586:30226-30245 Msa1346220:intron 45.0%
TGTCATGCCTAACCAAAAGC+AGG - tig0008586:30241-30260 None:intergenic 45.0%
TCTGCTTACTTTCTACCGAG+AGG + tig0008586:30524-30543 Msa1346220:intron 45.0%
GTCTTGCCTCATTATTCCAG+AGG - tig0008586:30755-30774 None:intergenic 45.0%
!! GTGCTGATCAGCGTTCTTTT+AGG + tig0008586:30945-30964 Msa1346220:CDS 45.0%
!! TCCTTCTCAAAGAGAGTGTC+CGG - tig0008586:30998-31017 None:intergenic 45.0%
ACCCAACGAAAATTGGCTGA+TGG + tig0008586:31057-31076 Msa1346220:intron 45.0%
! GCCATCAGCCAATTTTCGTT+GGG - tig0008586:31061-31080 None:intergenic 45.0%
! TGCCATCAGCCAATTTTCGT+TGG - tig0008586:31062-31081 None:intergenic 45.0%
GTGGACTTCCTTCAAGCTAT+AGG + tig0008586:31194-31213 Msa1346220:intron 45.0%
TTCTGTACGAAATCCCTGAG+AGG - tig0008586:31270-31289 None:intergenic 45.0%
! CAGCATTTTGTGTACTCAGG+TGG - tig0008586:31564-31583 None:intergenic 45.0%
AGTCGATCTCCATCTTGGTT+TGG + tig0008586:31747-31766 Msa1346220:intron 45.0%
TGCAGGGCTTACCATATATG+TGG + tig0008586:31819-31838 Msa1346220:intron 45.0%
GGTAAAGATGCAGCATCACA+TGG + tig0008586:32341-32360 Msa1346220:CDS 45.0%
AGATGCAGCATCACATGGTT+TGG + tig0008586:32346-32365 Msa1346220:CDS 45.0%
! GGTTTGGTTGATGCTATTGG+TGG + tig0008586:32362-32381 Msa1346220:CDS 45.0%
CTGTTCGTCCTGAGGTATAT+TGG - tig0008586:32423-32442 None:intergenic 45.0%
CAATATACCTCAGGACGAAC+AGG + tig0008586:32421-32440 Msa1346220:CDS 45.0%
TAACTAACCTGTTCGTCCTG+AGG - tig0008586:32431-32450 None:intergenic 45.0%
CGTGCGCCTAATAAAATCTC+AGG - tig0008586:32577-32596 None:intergenic 45.0%
CTTCAACGTGCTTTCAACTC+CGG - tig0008586:32611-32630 None:intergenic 45.0%
ACGTTGAAGGAACTGCTACA+GGG + tig0008586:32622-32641 Msa1346220:CDS 45.0%
! CAGGGGTTGACATTTTCTGA+TGG + tig0008586:32640-32659 Msa1346220:CDS 45.0%
TGATGGAGTTCAAGCTAGGA+TGG + tig0008586:32657-32676 Msa1346220:CDS 45.0%
GACAAAATGGGGTTGTCGTT+GGG - tig0008586:32715-32734 None:intergenic 45.0%
TGACAAAATGGGGTTGTCGT+TGG - tig0008586:32716-32735 None:intergenic 45.0%
TGTACGTACAGTGATTGCGA+GGG - tig0008586:32876-32895 None:intergenic 45.0%
ATGTACGTACAGTGATTGCG+AGG - tig0008586:32877-32896 None:intergenic 45.0%
TATGCCTGGATTGTCTCATC+TGG + tig0008586:32952-32971 Msa1346220:three_prime_UTR 45.0%
AAGTCCAGATGAGACAATCC+AGG - tig0008586:32959-32978 None:intergenic 45.0%
TGTCTCATCTGGACTTCTGT+AGG + tig0008586:32963-32982 Msa1346220:three_prime_UTR 45.0%
GTCTCATCTGGACTTCTGTA+GGG + tig0008586:32964-32983 Msa1346220:three_prime_UTR 45.0%
TCTCATCTGGACTTCTGTAG+GGG + tig0008586:32965-32984 Msa1346220:three_prime_UTR 45.0%
!! ATAAATATTATATGTATATT+TGG + tig0008586:25457-25476 Msa1346220:intron 5.0%
!!! AAATTATAACTTTTTATTTT+AGG + tig0008586:27499-27518 Msa1346220:intron 5.0%
!! TACTTTATATTAATAATAAT+AGG - tig0008586:31101-31120 None:intergenic 5.0%
! GGAAGAATCGAAAGCGCGAA+GGG - tig0008586:22398-22417 None:intergenic 50.0%
! AGGAAGAATCGAAAGCGCGA+AGG - tig0008586:22399-22418 None:intergenic 50.0%
CCTTTACGAACACGTTCCCA+TGG - tig0008586:22568-22587 None:intergenic 50.0%
CCATGGGAACGTGTTCGTAA+AGG + tig0008586:22565-22584 Msa1346220:CDS 50.0%
TACAATGAAGCTTCGTGGCC+AGG + tig0008586:22597-22616 Msa1346220:CDS 50.0%
! GTTGTTGCCTTGTGAGTTGG+AGG + tig0008586:23473-23492 Msa1346220:intron 50.0%
CTCATGACCTCCAACTCACA+AGG - tig0008586:23483-23502 None:intergenic 50.0%
!! GCAAGCGGAAAGCTGTTTCT+AGG - tig0008586:23513-23532 None:intergenic 50.0%
AGAAACAGCTTTCCGCTTGC+GGG + tig0008586:23513-23532 Msa1346220:intron 50.0%
GTTCAAGCCTCATTCCTCAG+AGG + tig0008586:24749-24768 Msa1346220:CDS 50.0%
! CAGCTTACCTCTGAGGAATG+AGG - tig0008586:24759-24778 None:intergenic 50.0%
CTCATTCCTCAGAGGTAAGC+TGG + tig0008586:24757-24776 Msa1346220:intron 50.0%
GAAAGACCAGCTTACCTCTG+AGG - tig0008586:24766-24785 None:intergenic 50.0%
! TGACCCAAATGGCTTGGGTT+GGG + tig0008586:25586-25605 Msa1346220:intron 50.0%
AAGCCCAACCCAAGCCATTT+GGG - tig0008586:25592-25611 None:intergenic 50.0%
GGGAATGATACCTGGTAGTC+TGG + tig0008586:25800-25819 Msa1346220:intron 50.0%
GAGTTGAACCGCAAGTGGAA+AGG + tig0008586:26206-26225 Msa1346220:CDS 50.0%
GAACCGCAAGTGGAAAGGAT+TGG + tig0008586:26211-26230 Msa1346220:CDS 50.0%
AACTGCCAACGGTCGATTAC+GGG + tig0008586:26914-26933 Msa1346220:CDS 50.0%
TTCTACCCGTAATCGACCGT+TGG - tig0008586:26922-26941 None:intergenic 50.0%
CTGTTGAAGCATAGAGGTGG+AGG - tig0008586:27175-27194 None:intergenic 50.0%
CTCCACCTCTATGCTTCAAC+AGG + tig0008586:27173-27192 Msa1346220:intron 50.0%
TCCCTGTTGAAGCATAGAGG+TGG - tig0008586:27178-27197 None:intergenic 50.0%
ACAGGAAATACTCCCGGGTT+AGG + tig0008586:27831-27850 Msa1346220:intron 50.0%
! CGGGTTAGGAAATGGACACT+TGG + tig0008586:27845-27864 Msa1346220:CDS 50.0%
AACTCGACTAATGCTCCCTG+AGG - tig0008586:27909-27928 None:intergenic 50.0%
GAGAAGATTCGCACTGTCAG+AGG + tig0008586:27980-27999 Msa1346220:CDS 50.0%
GAAACAGGATGCTAGGACTG+AGG + tig0008586:28238-28257 Msa1346220:intron 50.0%
TTGGTCCCTCAGCCGTAAAA+TGG - tig0008586:29003-29022 None:intergenic 50.0%
GTATCACGGTGCTTAGGATG+TGG + tig0008586:29291-29310 Msa1346220:intron 50.0%
GGTTCAATTGGAGTGGTCAC+AGG + tig0008586:29440-29459 Msa1346220:CDS 50.0%
GGAGTGGTCACAGGTAATCA+CGG + tig0008586:29449-29468 Msa1346220:intron 50.0%
!!! GGGGCTACAGGATTTTGGTT+TGG - tig0008586:29959-29978 None:intergenic 50.0%
!! GGTTTGGGGCTACAGGATTT+TGG - tig0008586:29964-29983 None:intergenic 50.0%
!! AAAGGTTGGTTTGGGGCTAC+AGG - tig0008586:29971-29990 None:intergenic 50.0%
TTCACGCGCCGTTAATATCG+AGG + tig0008586:31631-31650 Msa1346220:intron 50.0%
GTTACAAGTTCAACCTGGGG+AGG + tig0008586:32010-32029 Msa1346220:intron 50.0%
CTCAACCTAGGTGGACAAGA+TGG + tig0008586:32289-32308 Msa1346220:intron 50.0%
AACCTAGGTGGACAAGATGG+AGG + tig0008586:32292-32311 Msa1346220:intron 50.0%
AAGATGGAGGAGGTAGCACA+GGG + tig0008586:32305-32324 Msa1346220:CDS 50.0%
AGGTAGCACAGGGTAGAGTT+TGG + tig0008586:32315-32334 Msa1346220:CDS 50.0%
CTATGGCAATAGCTCGGGAA+AGG - tig0008586:32388-32407 None:intergenic 50.0%
GACTTTGCTTGTGCTATGCC+AGG + tig0008586:32513-32532 Msa1346220:intron 50.0%
GCTATGCCAGGTAACTGTTG+TGG + tig0008586:32525-32544 Msa1346220:intron 50.0%
AGGTAGAGAGGGACTAGATC+TGG - tig0008586:32557-32576 None:intergenic 50.0%
CGTGCTTTCAACTCCGGTTA+GGG - tig0008586:32605-32624 None:intergenic 50.0%
ACGTGCTTTCAACTCCGGTT+AGG - tig0008586:32606-32625 None:intergenic 50.0%
! CGGAGTTGAAAGCACGTTGA+AGG + tig0008586:32609-32628 Msa1346220:CDS 50.0%
CACGTTGAAGGAACTGCTAC+AGG + tig0008586:32621-32640 Msa1346220:CDS 50.0%
CGTTGAAGGAACTGCTACAG+GGG + tig0008586:32623-32642 Msa1346220:CDS 50.0%
GGAGTTCAAGCTAGGATGGA+TGG + tig0008586:32661-32680 Msa1346220:CDS 50.0%
GTACGTACAGTGATTGCGAG+GGG - tig0008586:32875-32894 None:intergenic 50.0%
!! TAAGGTGTTGCGGCGGTAGA+GGG - tig0008586:22281-22300 None:intergenic 55.0%
!! ATAAGGTGTTGCGGCGGTAG+AGG - tig0008586:22282-22301 None:intergenic 55.0%
GGCTGCCAATGCATAAGCCA+TGG + tig0008586:24324-24343 Msa1346220:intron 55.0%
TCTCTTCACATGCACACGCG+AGG - tig0008586:24685-24704 None:intergenic 55.0%
! CTGACCCAAATGGCTTGGGT+TGG + tig0008586:25585-25604 Msa1346220:intron 55.0%
CAAGCCCAACCCAAGCCATT+TGG - tig0008586:25593-25612 None:intergenic 55.0%
! CTCTAGCTCAGGCATCACTG+CGG + tig0008586:27946-27965 Msa1346220:CDS 55.0%
TACGGCTGAGGGACCAATTG+TGG + tig0008586:29006-29025 Msa1346220:intron 55.0%
ATGGCTGATGTGGCAGCAAG+TGG + tig0008586:29359-29378 Msa1346220:CDS 55.0%
CATTGCTCAGCGCCTCAACA+AGG - tig0008586:29653-29672 None:intergenic 55.0%
! GCCGGACACTCTCTTTGAGA+AGG + tig0008586:30994-31013 Msa1346220:intron 55.0%
CTCCTCCATCTTGTCCACCT+AGG - tig0008586:32297-32316 None:intergenic 55.0%
CTAGGTGGACAAGATGGAGG+AGG + tig0008586:32295-32314 Msa1346220:intron 55.0%
CAAGATGGAGGAGGTAGCAC+AGG + tig0008586:32304-32323 Msa1346220:CDS 55.0%
GCACAGGGTAGAGTTTGGAC+TGG + tig0008586:32320-32339 Msa1346220:CDS 55.0%
!! AAGGTGTTGCGGCGGTAGAG+GGG - tig0008586:22280-22299 None:intergenic 60.0%
ACACGAGGCTTCCACCAGGT+GGG - tig0008586:23542-23561 None:intergenic 60.0%
AAGCACACGAGGCTTCCACC+AGG - tig0008586:23546-23565 None:intergenic 60.0%
GTAGGCTGGGTCAGGAACCA+TGG + tig0008586:25004-25023 Msa1346220:intron 60.0%
ATAGCCATCATCCGGGCCTC+AGG + tig0008586:27890-27909 Msa1346220:CDS 60.0%
TAGCCATCATCCGGGCCTCA+GGG + tig0008586:27891-27910 Msa1346220:CDS 60.0%
GACTAATGCTCCCTGAGGCC+CGG - tig0008586:27904-27923 None:intergenic 60.0%
TAGCTCAGGCATCACTGCGG+AGG + tig0008586:27949-27968 Msa1346220:CDS 60.0%
GCTGATGTGGCAGCAAGTGG+AGG + tig0008586:29362-29381 Msa1346220:CDS 60.0%
! AGGTGTTGCGGCGGTAGAGG+GGG - tig0008586:22279-22298 None:intergenic 65.0%
ACGAGGCTTCCACCAGGTGG+GGG - tig0008586:23540-23559 None:intergenic 65.0%
CACGAGGCTTCCACCAGGTG+GGG - tig0008586:23541-23560 None:intergenic 65.0%
CACACGAGGCTTCCACCAGG+TGG - tig0008586:23543-23562 None:intergenic 65.0%
!! GAGGCAAGAGCGTCACCTCC+AGG - tig0008586:28625-28644 None:intergenic 65.0%
GAAGAACTCTCGGCCTCCCC+AGG - tig0008586:32026-32045 None:intergenic 65.0%
GGCGCACGGAGTTCCCTAAC+CGG + tig0008586:32589-32608 Msa1346220:CDS 65.0%
GTGTTGCGGCGGTAGAGGGG+GGG - tig0008586:22277-22296 None:intergenic 70.0%
! GGTGTTGCGGCGGTAGAGGG+GGG - tig0008586:22278-22297 None:intergenic 70.0%
GCTCCCTGAGGCCCGGATGA+TGG - tig0008586:27897-27916 None:intergenic 70.0%
! CGGCGGTAGAGGGGGGGTGT+GGG - tig0008586:22271-22290 None:intergenic 75.0%
CCAGGTGGGGGACCCGCAAG+CGG - tig0008586:23528-23547 None:intergenic 75.0%
CTTGCGGGTCCCCCACCTGG+TGG + tig0008586:23528-23547 Msa1346220:intron 75.0%
! GCGGCGGTAGAGGGGGGGTG+TGG - tig0008586:22272-22291 None:intergenic 80.0%
! CCGCTTGCGGGTCCCCCACC+TGG + tig0008586:23525-23544 Msa1346220:intron 80.0%
Chromosome Type Strat End Strand Name
tig0008586 gene 22120 33076 22120 ID=Msa1346220;Name=Msa1346220
tig0008586 mRNA 22120 33076 22120 ID=Msa1346220-mRNA-1;Parent=Msa1346220;Name=Msa1346220-mRNA-1;_AED=0.11;_eAED=0.11;_QI=107|1|1|1|0.92|0.85|14|311|664
tig0008586 exon 22120 22179 22120 ID=Msa1346220-mRNA-1:exon:5397;Parent=Msa1346220-mRNA-1
tig0008586 exon 22203 22618 22203 ID=Msa1346220-mRNA-1:exon:5398;Parent=Msa1346220-mRNA-1
tig0008586 exon 23714 23897 23714 ID=Msa1346220-mRNA-1:exon:5399;Parent=Msa1346220-mRNA-1
tig0008586 exon 24633 24770 24633 ID=Msa1346220-mRNA-1:exon:5400;Parent=Msa1346220-mRNA-1
tig0008586 exon 26188 26358 26188 ID=Msa1346220-mRNA-1:exon:5401;Parent=Msa1346220-mRNA-1
tig0008586 exon 26434 26537 26434 ID=Msa1346220-mRNA-1:exon:5402;Parent=Msa1346220-mRNA-1
tig0008586 exon 26868 26935 26868 ID=Msa1346220-mRNA-1:exon:5403;Parent=Msa1346220-mRNA-1
tig0008586 exon 27835 28001 27835 ID=Msa1346220-mRNA-1:exon:5404;Parent=Msa1346220-mRNA-1
tig0008586 exon 28581 28650 28581 ID=Msa1346220-mRNA-1:exon:5405;Parent=Msa1346220-mRNA-1
tig0008586 exon 29307 29461 29307 ID=Msa1346220-mRNA-1:exon:5406;Parent=Msa1346220-mRNA-1
tig0008586 exon 30861 30966 30861 ID=Msa1346220-mRNA-1:exon:5407;Parent=Msa1346220-mRNA-1
tig0008586 exon 32115 32202 32115 ID=Msa1346220-mRNA-1:exon:5408;Parent=Msa1346220-mRNA-1
tig0008586 exon 32299 32442 32299 ID=Msa1346220-mRNA-1:exon:5409;Parent=Msa1346220-mRNA-1
tig0008586 exon 32535 33076 32535 ID=Msa1346220-mRNA-1:exon:5410;Parent=Msa1346220-mRNA-1
tig0008586 five_prime_UTR 22120 22179 22120 ID=Msa1346220-mRNA-1:five_prime_utr;Parent=Msa1346220-mRNA-1
tig0008586 five_prime_UTR 22203 22249 22203 ID=Msa1346220-mRNA-1:five_prime_utr;Parent=Msa1346220-mRNA-1
tig0008586 CDS 22250 22618 22250 ID=Msa1346220-mRNA-1:cds;Parent=Msa1346220-mRNA-1
tig0008586 CDS 23714 23897 23714 ID=Msa1346220-mRNA-1:cds;Parent=Msa1346220-mRNA-1
tig0008586 CDS 24633 24770 24633 ID=Msa1346220-mRNA-1:cds;Parent=Msa1346220-mRNA-1
tig0008586 CDS 26188 26358 26188 ID=Msa1346220-mRNA-1:cds;Parent=Msa1346220-mRNA-1
tig0008586 CDS 26434 26537 26434 ID=Msa1346220-mRNA-1:cds;Parent=Msa1346220-mRNA-1
tig0008586 CDS 26868 26935 26868 ID=Msa1346220-mRNA-1:cds;Parent=Msa1346220-mRNA-1
tig0008586 CDS 27835 28001 27835 ID=Msa1346220-mRNA-1:cds;Parent=Msa1346220-mRNA-1
tig0008586 CDS 28581 28650 28581 ID=Msa1346220-mRNA-1:cds;Parent=Msa1346220-mRNA-1
tig0008586 CDS 29307 29461 29307 ID=Msa1346220-mRNA-1:cds;Parent=Msa1346220-mRNA-1
tig0008586 CDS 30861 30966 30861 ID=Msa1346220-mRNA-1:cds;Parent=Msa1346220-mRNA-1
tig0008586 CDS 32115 32202 32115 ID=Msa1346220-mRNA-1:cds;Parent=Msa1346220-mRNA-1
tig0008586 CDS 32299 32442 32299 ID=Msa1346220-mRNA-1:cds;Parent=Msa1346220-mRNA-1
tig0008586 CDS 32535 32765 32535 ID=Msa1346220-mRNA-1:cds;Parent=Msa1346220-mRNA-1
tig0008586 three_prime_UTR 32766 33076 32766 ID=Msa1346220-mRNA-1:three_prime_utr;Parent=Msa1346220-mRNA-1
Gene Sequence

>Msa1346220

ATGTCTACACTTCTTCTACCCACACCCCCCCTCTACCGCCGCAACACCTTATCATCATCATCATCATCGCTTCAATTTCACTCTCGCTTCTCTTTTTCTTCTTTTCATTCACTTCCTCAATCTCATTCAAGAAAAACACGCATTTCCCTTCGCGCTTTCGATTCTTCCTCCGACACCAAAATCGAAGAAAAAGTGATTCAAGAAGGTGAAAAAGTTAGAATTGCTGATGAAGATTATCCCAGTGGAGAATTTGAATTTGAACCTATTACTGGTTGGAGGAATTTCGTCGTTAAGGTTAAGATGCTCATTGCGTATCCATGGGAACGTGTTCGTAAAGGTAGTGTTCTTACAATGAAGCTTCGTGGCCAGATATCTGATCAAGTGAAGAGTAGATTCTCTCCGGGACTTTCTCTACCTCAAATATGCGAGAATTTTTTGAAAGCAGCCTATGATCCTCGAATTTCTGGGGTCTATCTCCATATTGATAGTTTAAACTGTGGGTGGGGTAAAGTAGAAGAAATTCGAAGGCACATCTTGAATTTCAAAAAATCAGGAAAATTTGTTGTGGCTTATCTCCCTACATGTCAAGAAAAAGAATATTACCTCGCGTGTGCATGTGAAGAGATATATGCCCCTCCAAGTGCTTACTTTTCTTTGTTTGGATTGAGTGTTCAAGCCTCATTCCTCAGAGGCGTTTTAGATAAAATAGGAGTTGAACCGCAAGTGGAAAGGATTGGCAAGTACAAAAGTGCAGGAGATCAATTAGCTCGAACAACCATGTCTGATGAAAATTGTGAGATGTTGACTGCATTACTAGATAATATCTATACAAACTGGCTGGATAAAGTCTCTTCTGCCAAAGGAAAAGGAAGAGAAGATATTGAGAACTTTATAAATGAAGGTGTTTATCAAGTTGATAAGCTGAAAGAAGAGGGCCTTATATCAAATTTAATGTATGATGATGAGGTTACTGACATGTTGAAGGAGAGACTTGGAGTGAAAACAGATAAAAAACTGCCAACGGTCGATTACGGGAAATACTCCCGGGTTAGGAAATGGACACTTGGAATTTCAGGTGGCAAAGAACTGATAGCCATCATCCGGGCCTCAGGGAGCATTAGTCGAGTTAAGGGTCAGTTAAGTGTCTCTAGCTCAGGCATCACTGCGGAGGAGTTCATTGAGAAGATTCGCACTGTCAGAGAGTCAAAAAAATTTAAGGCTGCTATTATCAGAATTGACAGTCCTGGAGGTGACGCTCTTGCCTCTGATTTGATGTGGAGAGAAATTCGGCTTTTAGCTGCTTCAAAACCAGTCATTGCTTCAATGGCTGATGTGGCAGCAAGTGGAGGATACTACATGGCAATGGGAACTGATGCTATTGTTGCAGAAAGTCTTACGTTAACTGGTTCAATTGGAGTGGTCACAGGAAAATTTAACCTAGCGAAACTGTATGAGAAGATTGGCTTTAATAAAGAAATCATATCAAGGGGAAGATATGCTGAGCTCGTTAGTGCTGATCAGCGTTCTTTTAGGCCAGATGAAGCAGAGCTATTTGCCAAATCTGCACAGAATGCATATAAACAATTTCGAGACAAGGCAGCTTTATCCAGATCTATGACTGTGGACAAGATGGAGGAGGTAGCACAGGGTAGAGTTTGGACTGGTAAAGATGCAGCATCACATGGTTTGGTTGATGCTATTGGTGGCCTTTCCCGAGCTATTGCCATAGCAAAATTGAAGGCCAATATACCTCAGGACGAACAGGTAACTGTTGTGGAGATATCCAGATCTAGTCCCTCTCTACCTGAGATTTTATTAGGCGCACGGAGTTCCCTAACCGGAGTTGAAAGCACGTTGAAGGAACTGCTACAGGGGTTGACATTTTCTGATGGAGTTCAAGCTAGGATGGATGGAATCATTTTTCGTTCATTGGAAGGATATCCCAACGACAACCCCATTTTGTCAATTATAAAAGATTACCTCAGTTCCCTGTAG
Protein sequence

>Msa1346220

MSTLLLPTPPLYRRNTLSSSSSSLQFHSRFSFSSFHSLPQSHSRKTRISLRAFDSSSDTKIEEKVIQEGEKVRIADEDYPSGEFEFEPITGWRNFVVKVKMLIAYPWERVRKGSVLTMKLRGQISDQVKSRFSPGLSLPQICENFLKAAYDPRISGVYLHIDSLNCGWGKVEEIRRHILNFKKSGKFVVAYLPTCQEKEYYLACACEEIYAPPSAYFSLFGLSVQASFLRGVLDKIGVEPQVERIGKYKSAGDQLARTTMSDENCEMLTALLDNIYTNWLDKVSSAKGKGREDIENFINEGVYQVDKLKEEGLISNLMYDDEVTDMLKERLGVKTDKKLPTVDYGKYSRVRKWTLGISGGKELIAIIRASGSISRVKGQLSVSSSGITAEEFIEKIRTVRESKKFKAAIIRIDSPGGDALASDLMWREIRLLAASKPVIASMADVAASGGYYMAMGTDAIVAESLTLTGSIGVVTGKFNLAKLYEKIGFNKEIISRGRYAELVSADQRSFRPDEAELFAKSAQNAYKQFRDKAALSRSMTVDKMEEVAQGRVWTGKDAASHGLVDAIGGLSRAIAIAKLKANIPQDEQVTVVEISRSSPSLPEILLGARSSLTGVESTLKELLQGLTFSDGVQARMDGIIFRSLEGYPNDNPILSIIKDYLSSL*