AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0654880

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0654880 MtrunA17_Chr4g0051911 90.688 494 22 5 1 486 1 478 0.0 840
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0654880 AT4G18240.1 57.389 406 154 5 81 486 152 538 9.99e-132 407

Find 222 sgRNAs with CRISPR-Local

Find 642 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATATTGCATGCAGTCATATT+TGG 0.165615 4_3:+63242105 None:intergenic
CCATAACAGGTTGGTGGCTT+GGG 0.176401 4_3:-63242193 Msa0654880:intron
TCAAAGGAAGGTTGATAAAT+TGG 0.177835 4_3:-63243814 Msa0654880:CDS
CTAGCTGAATTTAATCCTTT+TGG 0.194710 4_3:+63241526 None:intergenic
GAATCATCGTGATCAGATTT+TGG 0.207155 4_3:+63245418 None:intergenic
AAGTTCATCGGTGTTCTTAA+TGG 0.242169 4_3:-63240318 Msa0654880:three_prime_UTR
CCTCCACAGTTCTCACTTCT+TGG 0.247602 4_3:+63241225 None:intergenic
ATCATCCTGATAAGTTCTTT+TGG 0.274259 4_3:-63241794 Msa0654880:three_prime_UTR
TTCTATCTGGTCTGTTTAGA+TGG 0.276149 4_3:+63241422 None:intergenic
CAATTATTGCTTCTAATTGA+TGG 0.276345 4_3:-63243537 Msa0654880:CDS
CTCTGCTCCGTTTACATTCA+AGG 0.280109 4_3:+63244604 None:intergenic
AAGATATGCCGTGGGAATTC+TGG 0.284215 4_3:-63243563 Msa0654880:CDS
TCCATAACAGGTTGGTGGCT+TGG 0.292024 4_3:-63242194 Msa0654880:intron
TCAAGGGAAAGCAGAGAATA+AGG 0.293067 4_3:-63240226 Msa0654880:three_prime_UTR
TACGCGCAATTAATCTCTTC+AGG 0.302897 4_3:-63236648 Msa0654880:three_prime_UTR
GCTATGCTAACCTGTCATTT+AGG 0.323249 4_3:+63237299 None:intergenic
CATGTCAGACGCAGCATAAA+TGG 0.325896 4_3:+63237806 None:intergenic
GAGGCTATATCTGCATTTCT+TGG 0.334967 4_3:-63243396 Msa0654880:CDS
TCTGCCAGGCTCCTTTATAC+TGG 0.336365 4_3:-63241561 Msa0654880:intron
TCTTTCTCGTTCCCCATTGA+AGG 0.343180 4_3:-63245766 Msa0654880:five_prime_UTR
GTGGAATTATTATTAGTATC+AGG 0.344166 4_3:+63245364 None:intergenic
AGACATCCTTCTTATAAATC+AGG 0.344850 4_3:-63244411 Msa0654880:CDS
ACAAGATTGGTTCCACAAAA+AGG 0.345815 4_3:-63239068 Msa0654880:three_prime_UTR
TGATGAACGTTTGGTGGTAT+TGG 0.348885 4_3:-63244042 Msa0654880:CDS
AATCTGAATTGATCCTTCAA+TGG 0.355025 4_3:+63245753 None:intergenic
AGGACACACAGGCTTGTCTT+TGG 0.355382 4_3:+63245793 None:intergenic
GAGTTGTCCTGCATTCTATC+TGG 0.360248 4_3:+63241409 None:intergenic
GAGTATTAGTGATGTATATA+TGG 0.362578 4_3:-63243442 Msa0654880:CDS
ATCTGAATTGATCCTTCAAT+GGG 0.365142 4_3:+63245754 None:intergenic
TATTGCATGCAGTCATATTT+GGG 0.368001 4_3:+63242106 None:intergenic
ATCAATTCAGATTGAAAGAA+TGG 0.368339 4_3:-63245743 Msa0654880:exon
CCTCTCCAAAAGAACTTATC+AGG 0.369301 4_3:+63241789 None:intergenic
ACAAAGGCCATACATGTAAA+TGG 0.370400 4_3:-63236157 Msa0654880:three_prime_UTR
TCATGACAATGAATGATATC+TGG 0.373989 4_3:+63241678 None:intergenic
GCAGCAAAAGATAAAACTAT+TGG 0.374806 4_3:-63243721 Msa0654880:CDS
GGAGGTCAATTTGTTCTACT+TGG 0.376408 4_3:-63239002 Msa0654880:three_prime_UTR
GGACACACAGGCTTGTCTTT+GGG 0.376898 4_3:+63245794 None:intergenic
CCTTACTGAGGAGCTTAATT+CGG 0.377587 4_3:-63244138 Msa0654880:CDS
ATGGTATTGACACTGATATA+TGG 0.386658 4_3:-63240299 Msa0654880:three_prime_UTR
AAGTGAGAAATGTTGCTTCA+TGG 0.387949 4_3:+63236288 None:intergenic
GTTGTAACCATTTACATGTA+TGG 0.389152 4_3:+63236150 None:intergenic
TGTTGTCATGATTCTTGAAA+TGG 0.390398 4_3:+63237868 None:intergenic
ATCTGGGTTGGCACTGTTGA+AGG 0.393577 4_3:-63241917 Msa0654880:intron
GTAAGGGATGCATAAGATAA+TGG 0.397735 4_3:+63243313 None:intergenic
CAACCTTCCTTTGAAGATCC+TGG 0.399688 4_3:+63243823 None:intergenic
CATAACAGGTTGGTGGCTTG+GGG 0.403639 4_3:-63242192 Msa0654880:intron
ATACAATACCTTCACAGTTT+CGG 0.403883 4_3:-63237194 Msa0654880:three_prime_UTR
ATATCATTCATTGTCATGAT+TGG 0.404496 4_3:-63241674 Msa0654880:three_prime_UTR
TTAGTATCAGGCACTACAAT+TGG 0.406866 4_3:+63245376 None:intergenic
ACAAGTTGCTTCCAACTCTC+AGG 0.410557 4_3:+63236619 None:intergenic
TACAAAATGCAGGGAGGTAA+AGG 0.411092 4_3:-63240372 Msa0654880:intron
CATGCGGGATGCGGCAGAAA+CGG 0.411499 4_3:-63245837 Msa0654880:five_prime_UTR
CTCACTTCTTGGGCGTAAGT+AGG 0.414308 4_3:+63241236 None:intergenic
GACAGTTCAGATACATCTTC+CGG 0.414870 4_3:+63243957 None:intergenic
GCATATATGTCCCAGTATAA+AGG 0.416270 4_3:+63241550 None:intergenic
GCGTAATGAGTTGGCCGAAA+AGG 0.418873 4_3:-63244219 Msa0654880:CDS
CCGAATTAAGCTCCTCAGTA+AGG 0.421532 4_3:+63244138 None:intergenic
AGGCTATATCTGCATTTCTT+GGG 0.422991 4_3:-63243395 Msa0654880:CDS
ATGCGGGATGCGGCAGAAAC+GGG 0.424687 4_3:-63245836 Msa0654880:five_prime_UTR
GAAGATCATTTGCACTGTAC+TGG 0.432795 4_3:+63240247 None:intergenic
ATGACCTGGATATGTGGAAC+TGG 0.432799 4_3:+63238972 None:intergenic
ATGCAAGCATTTATCAGATA+AGG 0.434574 4_3:-63243919 Msa0654880:CDS
AAATAGGCCTTGAATGTAAA+CGG 0.437824 4_3:-63244611 Msa0654880:intron
TATAGACGTTAGCTTCTTCA+AGG 0.438048 4_3:+63243784 None:intergenic
TTTCTTCTGCAGATGTTAAG+AGG 0.439149 4_3:-63240179 Msa0654880:three_prime_UTR
CTCCACAGTTCTCACTTCTT+GGG 0.439457 4_3:+63241226 None:intergenic
TCACTTCTTGGGCGTAAGTA+GGG 0.443182 4_3:+63241237 None:intergenic
TGGGGCTCAATGAAATAAAC+AGG 0.444627 4_3:+63241816 None:intergenic
GGTTGGCTGCATAACAAGAT+TGG 0.444710 4_3:-63239081 Msa0654880:three_prime_UTR
TCAAGAATCATGACAACATA+AGG 0.445108 4_3:-63237863 Msa0654880:three_prime_UTR
GAGATTAATTGCGCGTACTA+AGG 0.453266 4_3:+63236654 None:intergenic
CTGTACTGGACTTCAAGAAA+TGG 0.459297 4_3:+63240261 None:intergenic
AGTGGGTAGAGAGGGTTGAA+TGG 0.459646 4_3:+63240346 None:intergenic
CTTGAGTTTCTTCTTCAAGC+TGG 0.459726 4_3:-63241708 Msa0654880:three_prime_UTR
TGAAAGAATGGCTTCGAAGC+TGG 0.461646 4_3:-63245731 Msa0654880:exon
CAGACGCAGCATAAATGGTA+TGG 0.463540 4_3:+63237811 None:intergenic
AAAAGAACTTATCAGGATGA+TGG 0.466946 4_3:+63241796 None:intergenic
CGTAATGAGTTGGCCGAAAA+GGG 0.468079 4_3:-63244218 Msa0654880:CDS
TGCACTTGAAGATCTTCAAA+AGG 0.468986 4_3:-63244378 Msa0654880:CDS
ACAGTTGTCTGGTGGTCAAT+TGG 0.469922 4_3:-63244573 Msa0654880:CDS
CATTACGCAGTTTCTCCAAC+TGG 0.471171 4_3:+63244234 None:intergenic
ATTCTCTAGAGAGAATTTGA+AGG 0.471383 4_3:-63237900 Msa0654880:intron
GTTTCTGCCGCATCCCGCAT+GGG 0.474033 4_3:+63245839 None:intergenic
CTCTAGCCTGATTTATAAGA+AGG 0.474319 4_3:+63244405 None:intergenic
GAAAATATGACCTGGATATG+TGG 0.475465 4_3:+63238966 None:intergenic
TCCATTGACGGAGGAGGAGG+AGG 0.477653 4_3:-63245454 Msa0654880:CDS
AATATATCTAACACTGGAGC+TGG 0.478866 4_3:-63239024 Msa0654880:three_prime_UTR
CGTTTCTGCCGCATCCCGCA+TGG 0.479051 4_3:+63245838 None:intergenic
GAATGTAAACGGAGCAGAGC+AGG 0.479325 4_3:-63244600 Msa0654880:CDS
CAGATGATTTCAATGAGATA+TGG 0.481201 4_3:-63237352 Msa0654880:three_prime_UTR
ATCAAAACTGTCAATATCTC+CGG 0.481623 4_3:-63243976 Msa0654880:CDS
TATTGCTTCTAATTGATGGT+TGG 0.484247 4_3:-63243533 Msa0654880:CDS
TACAGTGCAAATGATCTTCA+AGG 0.485397 4_3:-63240243 Msa0654880:three_prime_UTR
ACGTTTGGTGGTATTGGAAA+AGG 0.486193 4_3:-63244036 Msa0654880:CDS
ATTCTTGCAGGCTTTGGATG+TGG 0.488180 4_3:-63241981 Msa0654880:intron
CCATCGATCTTTGAACCTTG+TGG 0.489475 4_3:-63237774 Msa0654880:three_prime_UTR
TTGTTTCCATAACAGGTTGG+TGG 0.497200 4_3:-63242199 Msa0654880:intron
CTTCAAGCACTATAACGGCT+TGG 0.498601 4_3:+63243850 None:intergenic
CTGATCTACCATCTCTGTGT+TGG 0.498744 4_3:+63236441 None:intergenic
AAGTAAAGCATTGCAAAAGA+AGG 0.499408 4_3:-63242152 Msa0654880:three_prime_UTR
CTGAAGCTGCTGCAGTCCCT+TGG 0.506177 4_3:+63241473 None:intergenic
CAAGAACAATGATGAACGTT+TGG 0.507566 4_3:-63244051 Msa0654880:CDS
TAGAGATGTTCTTGCATGGA+AGG 0.507926 4_3:+63236380 None:intergenic
AGAGATGGCACCAGTGGCTA+AGG 0.508859 4_3:-63243247 Msa0654880:intron
AAAGAACTTATCAGGATGAT+GGG 0.509934 4_3:+63241797 None:intergenic
TGCGACACCACCGTATTCTC+AGG 0.511703 4_3:-63245612 Msa0654880:intron
ATATGAATCACATATAATCC+TGG 0.512442 4_3:+63243276 None:intergenic
GAGCAGGCTGAACAGTTGTC+TGG 0.513578 4_3:-63244584 Msa0654880:CDS
TCAAGAAATGGATCAGTAGC+AGG 0.515259 4_3:+63240273 None:intergenic
AAACTGGTGGCCTAAATGAC+AGG 0.519105 4_3:-63237309 Msa0654880:intron
AGGTAAGGTACCTGAGAATA+CGG 0.519780 4_3:+63245602 None:intergenic
CTGCCAGGCTCCTTTATACT+GGG 0.520116 4_3:-63241560 Msa0654880:intron
AAGTCCAGTTCCACATATCC+AGG 0.520172 4_3:-63238976 Msa0654880:intron
GCGGATTGAAGTTGCTGACC+AGG 0.521108 4_3:-63244285 Msa0654880:CDS
TTCTTCAGCAGCACAATATG+AGG 0.521236 4_3:-63236563 Msa0654880:three_prime_UTR
AAATATCCCCATGCGGGATG+CGG 0.526846 4_3:-63245846 Msa0654880:five_prime_UTR
TGCATGAGCTTCATAATGAT+AGG 0.529529 4_3:-63244169 Msa0654880:CDS
GTAATAGAGTCATACTTTGA+TGG 0.529982 4_3:-63241959 Msa0654880:three_prime_UTR
ATTGACGGAGGAGGAGGAGG+AGG 0.531028 4_3:-63245451 Msa0654880:CDS
ATTAATAAATATCCCCATGC+GGG 0.532708 4_3:-63245852 Msa0654880:five_prime_UTR
GACTGCAGCAGCTTCAGAGT+TGG 0.533533 4_3:-63241467 Msa0654880:three_prime_UTR
CCTCCTCCGTCAATGGAAGA+TGG 0.534161 4_3:+63245460 None:intergenic
TGGGACATATATGCCCCAAA+AGG 0.536974 4_3:-63241541 Msa0654880:three_prime_UTR
TGAACAGCCATACCTGTGTT+AGG 0.537120 4_3:+63237751 None:intergenic
ACGCGCAATTAATCTCTTCA+GGG 0.538504 4_3:-63236647 Msa0654880:three_prime_UTR
TCTTCCATTGACGGAGGAGG+AGG 0.538753 4_3:-63245457 Msa0654880:CDS
TAAGATTGAAATGATAGCAC+AGG 0.539125 4_3:+63236471 None:intergenic
TCAGGGACGACCCTGAGAGT+TGG 0.541248 4_3:-63236630 Msa0654880:three_prime_UTR
TGAAGGGGATACCGAGGGTG+TGG 0.545888 4_3:+63245345 None:intergenic
TCCCACGGCATATCTTCCAC+TGG 0.546811 4_3:+63243570 None:intergenic
ATACCTTCACAGTTTCGGAA+TGG 0.546994 4_3:-63237189 Msa0654880:three_prime_UTR
AAGACCTAGATTCTTTCTCA+AGG 0.548744 4_3:+63240200 None:intergenic
TTGGAAGCAACTTGTTCAGA+AGG 0.549083 4_3:-63236611 Msa0654880:three_prime_UTR
GAAGCCTTGAGAAAGAATCT+AGG 0.549769 4_3:-63240204 Msa0654880:three_prime_UTR
CACTTCTTGGGCGTAAGTAG+GGG 0.550373 4_3:+63241238 None:intergenic
GATTCATATTGCAGCAGAGA+TGG 0.551113 4_3:-63243262 Msa0654880:three_prime_UTR
CCATCTTCCATTGACGGAGG+AGG 0.551863 4_3:-63245460 Msa0654880:CDS
TGAACTCATGGAGGGCCAGT+TGG 0.552690 4_3:-63244249 Msa0654880:CDS
TGCAGATGTTAAGAGGCCAT+TGG 0.553063 4_3:-63240172 Msa0654880:intron
AAAGACGCATGTTGAACTCA+TGG 0.553552 4_3:-63244261 Msa0654880:CDS
AAGCACTATAACGGCTTGGT+CGG 0.559921 4_3:+63243854 None:intergenic
ATAACAGGTTGGTGGCTTGG+GGG 0.560247 4_3:-63242191 Msa0654880:intron
TTCAATGGGGAACGAGAAAG+AGG 0.560852 4_3:+63245768 None:intergenic
GAACAATGATGAACGTTTGG+TGG 0.561740 4_3:-63244048 Msa0654880:CDS
AGTAAAGCATTGCAAAAGAA+GGG 0.562152 4_3:-63242151 Msa0654880:three_prime_UTR
CAATTAGAGATGTTCTTGCA+TGG 0.562414 4_3:+63236376 None:intergenic
ATCAGTTTCCAACACAGAGA+TGG 0.563919 4_3:-63236449 Msa0654880:three_prime_UTR
TATCTGGTCTGTTTAGATGG+TGG 0.565257 4_3:+63241425 None:intergenic
CGAATTAAGCTCCTCAGTAA+GGG 0.568634 4_3:+63244139 None:intergenic
CAAAAGGATTAAATTCAGCT+AGG 0.570834 4_3:-63241525 Msa0654880:three_prime_UTR
GGAGAAACTGCGTAATGAGT+TGG 0.571012 4_3:-63244228 Msa0654880:CDS
ATATATCTAACACTGGAGCT+GGG 0.575756 4_3:-63239023 Msa0654880:three_prime_UTR
AAGAAAACCAGGATCTTCAA+AGG 0.577026 4_3:-63243830 Msa0654880:CDS
AGATTTAATGCATAAACAGA+AGG 0.577360 4_3:-63236420 Msa0654880:three_prime_UTR
CATACCTGTGTTAGGCCACA+AGG 0.577489 4_3:+63237759 None:intergenic
AGACGCAGCATAAATGGTAT+GGG 0.579304 4_3:+63237812 None:intergenic
AAACCAGGATCTTCAAAGGA+AGG 0.581100 4_3:-63243826 Msa0654880:CDS
TCCCTTGGTACTCAAAGTTG+TGG 0.585289 4_3:+63241488 None:intergenic
GTCTTTGGGTTCACTCAGTG+AGG 0.586471 4_3:+63245808 None:intergenic
GTCATGATTCTTGAAATGGT+TGG 0.587756 4_3:+63237872 None:intergenic
TCACAGCCATCTTCCATTGA+CGG 0.589410 4_3:-63245466 Msa0654880:CDS
GATGTATATATGGCTTGCAA+AGG 0.591249 4_3:-63243432 Msa0654880:CDS
TAATAATAATTCCACACCCT+CGG 0.593918 4_3:-63245356 Msa0654880:intron
AATGAATTCACCTTAGCCAC+TGG 0.594191 4_3:+63243237 None:intergenic
TACTTAAAGTCTGTGACTAG+AGG 0.596902 4_3:-63236535 Msa0654880:three_prime_UTR
CCACAAGGTTCAAAGATCGA+TGG 0.598033 4_3:+63237774 None:intergenic
TAACGACTTAGAGATGAGGT+TGG 0.600003 4_3:-63244321 Msa0654880:CDS
AATCCATTCCGAAACTGTGA+AGG 0.601972 4_3:+63237186 None:intergenic
TGCAGCAGAGATGGCACCAG+TGG 0.603229 4_3:-63243253 Msa0654880:three_prime_UTR
ACAGTGCAAATGATCTTCAA+GGG 0.603538 4_3:-63240242 Msa0654880:three_prime_UTR
AGAAAGCAAGAGAAAGACGC+TGG 0.604545 4_3:-63243598 Msa0654880:CDS
AACCAGTGGAAGATATGCCG+TGG 0.606256 4_3:-63243572 Msa0654880:CDS
CAAGTTGCTTCCAACTCTCA+GGG 0.608146 4_3:+63236620 None:intergenic
TGAACCTTGTGGCCTAACAC+AGG 0.608845 4_3:-63237763 Msa0654880:intron
GCCACAACTTTGAGTACCAA+GGG 0.609655 4_3:-63241489 Msa0654880:three_prime_UTR
TATCAGGCACTACAATTGGA+CGG 0.609853 4_3:+63245380 None:intergenic
TGGAGAGCACATTACGCGGT+GGG 0.609956 4_3:+63245654 None:intergenic
TGGGGAACGAGAAAGAGGAC+AGG 0.611198 4_3:+63245773 None:intergenic
GTCTGTGACTAGAGGAAGAG+CGG 0.614440 4_3:-63236527 Msa0654880:three_prime_UTR
ATAGACGTTAGCTTCTTCAA+GGG 0.614963 4_3:+63243785 None:intergenic
TAAGCTCCTCAGTAAGGGAA+CGG 0.616366 4_3:+63244144 None:intergenic
TTTCTGCCGCATCCCGCATG+GGG 0.616993 4_3:+63245840 None:intergenic
TATAGTGCTTGAAGAAAACC+AGG 0.617056 4_3:-63243841 Msa0654880:CDS
GGCTTACATCGTCTGCAACA+AGG 0.618089 4_3:-63243374 Msa0654880:CDS
ATTTGTGAATGCTGATGAGA+AGG 0.621507 4_3:-63237160 Msa0654880:intron
TGATAGAGTCAATTCTGTCA+AGG 0.625322 4_3:-63241380 Msa0654880:intron
AAACAGACCAGATAGAATGC+AGG 0.626984 4_3:-63241416 Msa0654880:three_prime_UTR
CTTGCATTCAACTCTAAGTG+TGG 0.631108 4_3:+63243935 None:intergenic
GCTCAATGAAATAAACAGGA+AGG 0.632993 4_3:+63241820 None:intergenic
GTGTGCTGCAATTTGAGCAG+CGG 0.634056 4_3:-63245697 Msa0654880:CDS
TGCCACAACTTTGAGTACCA+AGG 0.639727 4_3:-63241490 Msa0654880:three_prime_UTR
GAAGAAACTCAAGTGCTACA+CGG 0.642151 4_3:+63241718 None:intergenic
ACATGCAATATATCTAACAC+TGG 0.642390 4_3:-63239030 Msa0654880:three_prime_UTR
GGGTAGAGAGGGTTGAATGG+AGG 0.648233 4_3:+63240349 None:intergenic
ACGCATGTTGAACTCATGGA+GGG 0.650060 4_3:-63244257 Msa0654880:CDS
AAAGACGCTGGATGAACCAG+TGG 0.651059 4_3:-63243586 Msa0654880:CDS
AAGAACTTATCAGGATGATG+GGG 0.657540 4_3:+63241798 None:intergenic
TTCTATGGCATTCTTCAGAG+AGG 0.658220 4_3:+63244100 None:intergenic
ATGGAGAGCACATTACGCGG+TGG 0.659091 4_3:+63245653 None:intergenic
AATATGTCAACAGTGTACAA+AGG 0.659693 4_3:-63236173 Msa0654880:three_prime_UTR
GCTTCAGAGTTGGAATCATG+TGG 0.661516 4_3:-63241457 Msa0654880:three_prime_UTR
AATTGACTCCAGAATTCCCA+CGG 0.662373 4_3:+63243555 None:intergenic
AGAAAGAGGACAGGACACAC+AGG 0.663852 4_3:+63245782 None:intergenic
GACGCATGTTGAACTCATGG+AGG 0.664602 4_3:-63244258 Msa0654880:CDS
CAGGCTGAACAGTTGTCTGG+TGG 0.665061 4_3:-63244581 Msa0654880:CDS
AAGTTAACGACTTAGAGATG+AGG 0.665068 4_3:-63244325 Msa0654880:CDS
TATTAATAAATATCCCCATG+CGG 0.667586 4_3:-63245853 Msa0654880:five_prime_UTR
ACCAGTGGAAGATATGCCGT+GGG 0.676148 4_3:-63243571 Msa0654880:CDS
TGGGAAGTACGATTTCAACA+AGG 0.682155 4_3:+63242125 None:intergenic
ATTGTTGCTAGATAAAGCAA+CGG 0.685275 4_3:-63243883 Msa0654880:CDS
CGCCCAAGAAGTGAGAACTG+TGG 0.687875 4_3:-63241228 Msa0654880:three_prime_UTR
CCAAGAAGTGAGAACTGTGG+AGG 0.689930 4_3:-63241225 Msa0654880:intron
TAGGATCCGTTCCCTTACTG+AGG 0.694684 4_3:-63244150 Msa0654880:CDS
CAGCCATCTTCCATTGACGG+AGG 0.700118 4_3:-63245463 Msa0654880:CDS
AGACTACTTTAAATGTGACG+TGG 0.701483 4_3:-63236340 Msa0654880:three_prime_UTR
TGCATGCAATATGACCGCGT+TGG 0.706322 4_3:-63242094 Msa0654880:three_prime_UTR
GAAATGGAGAGCACATTACG+CGG 0.706474 4_3:+63245650 None:intergenic
TATCTAACACTGGAGCTGGG+AGG 0.740873 4_3:-63239020 Msa0654880:three_prime_UTR
TCTGAATTGATCCTTCAATG+GGG 0.741333 4_3:+63245755 None:intergenic
TAAGGTACCTGAGAATACGG+TGG 0.758925 4_3:+63245605 None:intergenic
GGTTGGCTGAGACTGATGCG+CGG 0.781736 4_3:-63244304 Msa0654880:CDS
ATACTCTTAAATCACCAACG+CGG 0.863183 4_3:+63242080 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTTATAATAAATAAATTGCA+AGG + chr4_3:63236669-63236688 None:intergenic 10.0%
!! ATAATTGAATAATTAGTTAA+TGG + chr4_3:63237351-63237370 None:intergenic 10.0%
!! TAATTATTCAATTATGAAAT+AGG - chr4_3:63237356-63237375 Msa0654880:intron 10.0%
!!! ATTTTTGAAATCTTTTTTTT+AGG - chr4_3:63239037-63239056 Msa0654880:three_prime_UTR 10.0%
!! TATAAAATATTTATTCTTCT+AGG + chr4_3:63239564-63239583 None:intergenic 10.0%
!! AATTATTCAAAAATAAAATC+TGG - chr4_3:63240049-63240068 Msa0654880:intron 10.0%
!! ATTATTCAAAAATAAAATCT+GGG - chr4_3:63240050-63240069 Msa0654880:intron 10.0%
!!! TTATATAATTCTTATTTCAT+AGG - chr4_3:63241837-63241856 Msa0654880:intron 10.0%
!! AAATTAATTGAATAGAATAT+AGG + chr4_3:63242719-63242738 None:intergenic 10.0%
!! AAAGAAATAATTAATGTAAT+TGG - chr4_3:63243394-63243413 Msa0654880:CDS 10.0%
!! GAAAACATATACATTTAAAA+AGG + chr4_3:63237504-63237523 None:intergenic 15.0%
!! TTGTTCTAATAGTAAAAAAA+GGG - chr4_3:63239123-63239142 Msa0654880:intron 15.0%
!! TTAAACATCATCATTATATT+GGG + chr4_3:63239365-63239384 None:intergenic 15.0%
!! ATCGTTATTTAATTAAGATT+AGG - chr4_3:63239420-63239439 Msa0654880:intron 15.0%
!! GTTTAGTATTAGTATAAATA+AGG - chr4_3:63239444-63239463 Msa0654880:intron 15.0%
!! ATATTGCATAAATGATATAT+CGG + chr4_3:63239498-63239517 None:intergenic 15.0%
!!! AATATTTTATAACTTTTGCA+TGG - chr4_3:63239573-63239592 Msa0654880:intron 15.0%
!! AAGAATTATATAATTACCAA+TGG + chr4_3:63241830-63241849 None:intergenic 15.0%
!!! TATAGGAACTTATAATATTT+TGG + chr4_3:63242702-63242721 None:intergenic 15.0%
!! AAGAAAAAAAAATCTCAAAA+GGG - chr4_3:63243445-63243464 Msa0654880:CDS 15.0%
!! AATAATGATACTAAAAAAAC+TGG - chr4_3:63243607-63243626 Msa0654880:CDS 15.0%
!!! AGCATTTTAAAATATAACTA+AGG - chr4_3:63243687-63243706 Msa0654880:CDS 15.0%
!!! ACAGAAATAATTAGTTTTAT+TGG + chr4_3:63243723-63243742 None:intergenic 15.0%
!!! AAGTAAGAGTTTATTTTTTT+TGG + chr4_3:63243938-63243957 None:intergenic 15.0%
!!! TGAGATATTTTTTAATGTTT+TGG - chr4_3:63243978-63243997 Msa0654880:CDS 15.0%
!! AATATGAAAAGCTTAAATTA+AGG - chr4_3:63244554-63244573 Msa0654880:CDS 15.0%
!!! ACTATTTTGATTAGATATCT+TGG + chr4_3:63236980-63236999 None:intergenic 20.0%
!!! TTTATTCAAACTAGTTCTTA+AGG - chr4_3:63237090-63237109 Msa0654880:intron 20.0%
!!! ATTATTCTGATTTTGTAGAA+TGG - chr4_3:63237271-63237290 Msa0654880:intron 20.0%
!!! CTGTATTTTAAATGATTCTA+TGG + chr4_3:63237901-63237920 None:intergenic 20.0%
!! TGTTTATAACCATTACAAAT+GGG - chr4_3:63239098-63239117 Msa0654880:intron 20.0%
!! GTTGTTCTAATAGTAAAAAA+AGG - chr4_3:63239122-63239141 Msa0654880:intron 20.0%
!! CTTAAACATCATCATTATAT+TGG + chr4_3:63239366-63239385 None:intergenic 20.0%
!!! CAATATAATGATGATGTTTA+AGG - chr4_3:63239364-63239383 Msa0654880:intron 20.0%
!! TATTGCATAAATGATATATC+GGG + chr4_3:63239497-63239516 None:intergenic 20.0%
!! TTTATTCTTCTAGGTATAAA+GGG + chr4_3:63239555-63239574 None:intergenic 20.0%
!! ATTTATTCTTCTAGGTATAA+AGG + chr4_3:63239556-63239575 None:intergenic 20.0%
!! ATAAAGACATTCAACTTAAA+TGG + chr4_3:63240109-63240128 None:intergenic 20.0%
!! AAGTTGAATGTCTTTATATA+TGG - chr4_3:63240112-63240131 Msa0654880:intron 20.0%
!! TTGGTAAAAAATGAATTAAG+AGG + chr4_3:63240356-63240375 None:intergenic 20.0%
!! TTGTTATATTTGCTCATAAA+TGG + chr4_3:63240657-63240676 None:intergenic 20.0%
!!! AAATTCTTCATTTTAGATGA+AGG + chr4_3:63241047-63241066 None:intergenic 20.0%
!!! TATTAATAAAAGCACATGAA+TGG + chr4_3:63241256-63241275 None:intergenic 20.0%
!!! GCTTTGTTTCTAATAATAAA+TGG - chr4_3:63241318-63241337 Msa0654880:intron 20.0%
!! ATCTTATACAGAAAAAACAA+TGG - chr4_3:63241484-63241503 Msa0654880:three_prime_UTR 20.0%
!! ATATTATTGTACAAAATGCA+GGG - chr4_3:63241602-63241621 Msa0654880:intron 20.0%
!!! CAATTTGTTTGAAACAATAT+AGG - chr4_3:63241861-63241880 Msa0654880:intron 20.0%
!! TATAGGCTTAATTAATGATT+TGG - chr4_3:63241878-63241897 Msa0654880:intron 20.0%
!! TTGTAACGTTAATAACTTAT+GGG + chr4_3:63242177-63242196 None:intergenic 20.0%
!! ATTGTAACGTTAATAACTTA+TGG + chr4_3:63242176-63242195 None:intergenic 20.0%
!! AAGTTATTAACGTTACAATT+TGG - chr4_3:63241938-63241957 Msa0654880:three_prime_UTR 20.0%
!! TTGTAACGTTAATAACTTAT+GGG + chr4_3:63242177-63242196 None:intergenic 20.0%
!! ATTGTAACGTTAATAACTTA+TGG + chr4_3:63242176-63242195 None:intergenic 20.0%
!! AAGTTATTAACGTTACAATT+TGG - chr4_3:63241938-63241957 Msa0654880:three_prime_UTR 20.0%
!! GAAACCAAAAAATAAGTTAA+GGG + chr4_3:63242148-63242167 None:intergenic 20.0%
!! CTTTATGTTATTAGAGTTAA+GGG + chr4_3:63242087-63242106 None:intergenic 20.0%
!! GAAACCAAAAAATAAGTTAA+GGG - chr4_3:63242148-63242167 Msa0654880:three_prime_UTR 20.0%
!! AAGTTATTAACGTTACAATT+TGG + chr4_3:63241938-63241957 None:intergenic 20.0%
!! ATTGTAACGTTAATAACTTA+TGG - chr4_3:63242176-63242195 Msa0654880:three_prime_UTR 20.0%
!! TTGTAACGTTAATAACTTAT+GGG - chr4_3:63242177-63242196 Msa0654880:three_prime_UTR 20.0%
!! AAGTTATTAACGTTACAATT+TGG + chr4_3:63241938-63241957 None:intergenic 20.0%
!! TTGTAACGTTAATAACTTAT+AGG - chr4_3:63242177-63242196 Msa0654880:three_prime_UTR 20.0%
!! AGCAAACTATAATATATTGT+TGG + chr4_3:63242312-63242331 None:intergenic 20.0%
!!! TATTGATTATCATTTTTCAG+AGG + chr4_3:63242641-63242660 None:intergenic 20.0%
!! ATATGTAAATTCCTAGAATT+TGG + chr4_3:63242676-63242695 None:intergenic 20.0%
!!! AATTTTTGTATGTTGCTTTA+AGG - chr4_3:63242734-63242753 Msa0654880:intron 20.0%
!! GAAGACATCATTTATATATA+TGG - chr4_3:63242777-63242796 Msa0654880:intron 20.0%
!! TTTCTATTCTCTTATATGAT+AGG - chr4_3:63242881-63242900 Msa0654880:intron 20.0%
!! GAAAATGATGCAAAATAAAT+AGG - chr4_3:63243360-63243379 Msa0654880:exon 20.0%
!! GAAGAAAAAAAAATCTCAAA+AGG - chr4_3:63243444-63243463 Msa0654880:CDS 20.0%
!!! TATTTCTGTATTTATAACTG+AGG - chr4_3:63243734-63243753 Msa0654880:CDS 20.0%
!! ATTTCTGTATTTATAACTGA+GGG - chr4_3:63243735-63243754 Msa0654880:CDS 20.0%
!!! TAAGAGTTTATTTTTTTTGG+TGG + chr4_3:63243935-63243954 None:intergenic 20.0%
!! ATGAATTAAGTTTGACAAAA+TGG + chr4_3:63244426-63244445 None:intergenic 20.0%
! TATTAATAAATATCCCCATG+CGG - chr4_3:63236130-63236149 Msa0654880:three_prime_UTR 25.0%
! ATCAATTCAGATTGAAAGAA+TGG - chr4_3:63236240-63236259 Msa0654880:three_prime_UTR 25.0%
! ATGCAAAATATTGATAGGTA+AGG + chr4_3:63236399-63236418 None:intergenic 25.0%
! TGCAAATGCAAAATATTGAT+AGG + chr4_3:63236404-63236423 None:intergenic 25.0%
! GTGGAATTATTATTAGTATC+AGG + chr4_3:63236622-63236641 None:intergenic 25.0%
! TACTCTTGAATTGAAAAATG+AGG + chr4_3:63236770-63236789 None:intergenic 25.0%
!! ATTTTATGAACTCAACTCAT+TGG + chr4_3:63236826-63236845 None:intergenic 25.0%
! AGTTGAGTTCATAAAATTAG+AGG - chr4_3:63236829-63236848 Msa0654880:intron 25.0%
!! TTTCATAAGTTGTTTCAGTA+TGG + chr4_3:63236919-63236938 None:intergenic 25.0%
! CATTTAGTTGTTTAAGTGTT+TGG + chr4_3:63237164-63237183 None:intergenic 25.0%
!!! TTTCTCTGCATTTTTTATCA+TGG + chr4_3:63237448-63237467 None:intergenic 25.0%
! AGAAAAGTAAGATATTCTTC+TGG - chr4_3:63237463-63237482 Msa0654880:intron 25.0%
!!! TTTTGATTCAAGGTCTTTTA+GGG + chr4_3:63237994-63238013 None:intergenic 25.0%
!!! ATATTGACAGTTTTGATTCA+AGG + chr4_3:63238004-63238023 None:intergenic 25.0%
! CAATTATTGCTTCTAATTGA+TGG - chr4_3:63238446-63238465 Msa0654880:intron 25.0%
! GAGTATTAGTGATGTATATA+TGG - chr4_3:63238541-63238560 Msa0654880:intron 25.0%
! ATATGAATCACATATAATCC+TGG + chr4_3:63238710-63238729 None:intergenic 25.0%
! GTTCATAACAATGCAAAATA+GGG + chr4_3:63238782-63238801 None:intergenic 25.0%
! AGTTCATAACAATGCAAAAT+AGG + chr4_3:63238783-63238802 None:intergenic 25.0%
! TGAAAGAATTAGAAACATCA+GGG + chr4_3:63238819-63238838 None:intergenic 25.0%
! TTGAAAGAATTAGAAACATC+AGG + chr4_3:63238820-63238839 None:intergenic 25.0%
! ACAGTAAAAGAACAGATTAT+AGG + chr4_3:63238861-63238880 None:intergenic 25.0%
! CTCTTTAGTATCATTTAAGT+GGG + chr4_3:63238895-63238914 None:intergenic 25.0%
! CTGTTTATAACCATTACAAA+TGG - chr4_3:63239097-63239116 Msa0654880:intron 25.0%
!! TGATGATGTTTAAGGAATTA+CGG - chr4_3:63239372-63239391 Msa0654880:intron 25.0%
! GATAATTTGATTATTCTTGC+AGG - chr4_3:63239990-63240009 Msa0654880:intron 25.0%
! TTCAAAAATAAAATCTGGGT+TGG - chr4_3:63240054-63240073 Msa0654880:intron 25.0%
! ATATCATTCATTGTCATGAT+TGG - chr4_3:63240309-63240328 Msa0654880:three_prime_UTR 25.0%
!! TAGCTGAATTTAATCCTTTT+GGG + chr4_3:63240459-63240478 None:intergenic 25.0%
! TCAACATAGATGCAATTATA+GGG + chr4_3:63240918-63240937 None:intergenic 25.0%
! AAAAGTCAAATAATGTGTCA+AGG + chr4_3:63241072-63241091 None:intergenic 25.0%
! ACATTGTTACACGAAATATA+AGG - chr4_3:63241383-63241402 Msa0654880:three_prime_UTR 25.0%
! CATTGTTACACGAAATATAA+GGG - chr4_3:63241384-63241403 Msa0654880:three_prime_UTR 25.0%
!!! ATGAATTTGCTATTGATCTT+TGG - chr4_3:63241449-63241468 Msa0654880:three_prime_UTR 25.0%
! CAATGTTTCAATTTGAAAAG+TGG - chr4_3:63241568-63241587 Msa0654880:intron 25.0%
! GATATTATTGTACAAAATGC+AGG - chr4_3:63241601-63241620 Msa0654880:intron 25.0%
! GTAACCAACAAATAACTTAA+GGG + chr4_3:63242268-63242287 None:intergenic 25.0%
! TGTAACCAACAAATAACTTA+AGG + chr4_3:63242267-63242286 None:intergenic 25.0%
!!! GTTATTTGTTGGTTACATTT+TGG - chr4_3:63241909-63241928 Msa0654880:intron 25.0%
! GTAACCAACAAATAACTTAA+GGG + chr4_3:63242268-63242287 None:intergenic 25.0%
! TGTAACCAACAAATAACTTA+AGG + chr4_3:63242267-63242286 None:intergenic 25.0%
!!! GTTATTTGTTGGTTACATTT+TGG - chr4_3:63241909-63241928 Msa0654880:intron 25.0%
! CGAAACCAAAAAATAAGTTA+AGG + chr4_3:63242147-63242166 None:intergenic 25.0%
! CCTTTATGTTATTAGAGTTA+AGG + chr4_3:63242088-63242107 None:intergenic 25.0%
! CCTTAACTCTAATAACATAA+AGG - chr4_3:63242085-63242104 Msa0654880:three_prime_UTR 25.0%
!!! CTTATTTTTTGGTTTCGTTT+TGG + chr4_3:63242060-63242079 None:intergenic 25.0%
! CGAAACCAAAAAATAAGTTA+AGG - chr4_3:63242147-63242166 Msa0654880:three_prime_UTR 25.0%
!!! GTTATTTGTTGGTTACATTT+TGG + chr4_3:63241909-63241928 None:intergenic 25.0%
! TGTAACCAACAAATAACTTA+AGG - chr4_3:63242267-63242286 Msa0654880:intron 25.0%
! GTAACCAACAAATAACTTAA+GGG - chr4_3:63242268-63242287 Msa0654880:intron 25.0%
!!! TGTTGGCTTAATTAATGATT+TGG + chr4_3:63242295-63242314 None:intergenic 25.0%
! TATTCTCTTATATGATAGGT+TGG - chr4_3:63242885-63242904 Msa0654880:intron 25.0%
!! TATTATACTCCACTTTAGAA+TGG - chr4_3:63243065-63243084 Msa0654880:intron 25.0%
! AGAAAGTCAACTTAGAATAA+AGG - chr4_3:63243110-63243129 Msa0654880:intron 25.0%
! ATGCAAAATAAATAGGAGTA+TGG - chr4_3:63243367-63243386 Msa0654880:exon 25.0%
! AATGTAATTGGAAATACCAA+AGG - chr4_3:63243406-63243425 Msa0654880:CDS 25.0%
! ATGTAATTGGAAATACCAAA+GGG - chr4_3:63243407-63243426 Msa0654880:CDS 25.0%
!! GATTTAGTTTAGAAATGTAC+TGG - chr4_3:63243655-63243674 Msa0654880:CDS 25.0%
! AATCAGTTGACAGAAAATAT+GGG + chr4_3:63244052-63244071 None:intergenic 25.0%
! TAATCAGTTGACAGAAAATA+TGG + chr4_3:63244053-63244072 None:intergenic 25.0%
!!! GTTCCTCTGTTTTTAAAATT+AGG - chr4_3:63245128-63245147 Msa0654880:intron 25.0%
! AGATTTAATGCATAAACAGA+AGG - chr4_3:63245563-63245582 Msa0654880:intron 25.0%
!! TTGACATATTCTAAAAACGT+AGG + chr4_3:63245800-63245819 None:intergenic 25.0%
ATTAATAAATATCCCCATGC+GGG - chr4_3:63236131-63236150 Msa0654880:three_prime_UTR 30.0%
ATCTGAATTGATCCTTCAAT+GGG + chr4_3:63236232-63236251 None:intergenic 30.0%
AATCTGAATTGATCCTTCAA+TGG + chr4_3:63236233-63236252 None:intergenic 30.0%
!!! ATTTTGCAAGATGATGGAAA+TGG + chr4_3:63236352-63236371 None:intergenic 30.0%
!! ATGATGATGATGTTTTCTTG+TGG + chr4_3:63236495-63236514 None:intergenic 30.0%
! TGATCAGATTTTGGATTAAG+AGG + chr4_3:63236559-63236578 None:intergenic 30.0%
TAATAATAATTCCACACCCT+CGG - chr4_3:63236627-63236646 Msa0654880:three_prime_UTR 30.0%
TCATAAAATTAGAGGCTGTT+TGG - chr4_3:63236837-63236856 Msa0654880:intron 30.0%
! CACTTGTTTAAGTGTTTTTC+TGG + chr4_3:63237202-63237221 None:intergenic 30.0%
GTTCTTCAATATGATTCAAG+AGG - chr4_3:63237303-63237322 Msa0654880:intron 30.0%
GATTCAAGAGGTTAAAAAGT+TGG - chr4_3:63237315-63237334 Msa0654880:three_prime_UTR 30.0%
AAATAGGCCTTGAATGTAAA+CGG - chr4_3:63237372-63237391 Msa0654880:intron 30.0%
TGATTTATAAGAAGGATGTC+TGG + chr4_3:63237573-63237592 None:intergenic 30.0%
AGACATCCTTCTTATAAATC+AGG - chr4_3:63237572-63237591 Msa0654880:intron 30.0%
!!! GTTTTGATTCAAGGTCTTTT+AGG + chr4_3:63237995-63238014 None:intergenic 30.0%
ATCAAAACTGTCAATATCTC+CGG - chr4_3:63238007-63238026 Msa0654880:intron 30.0%
ATGCAAGCATTTATCAGATA+AGG - chr4_3:63238064-63238083 Msa0654880:intron 30.0%
ATTGTTGCTAGATAAAGCAA+CGG - chr4_3:63238100-63238119 Msa0654880:intron 30.0%
! GTTTTCTTCAAGCACTATAA+CGG + chr4_3:63238141-63238160 None:intergenic 30.0%
!! TCAAAGGAAGGTTGATAAAT+TGG - chr4_3:63238169-63238188 Msa0654880:intron 30.0%
GCAGCAAAAGATAAAACTAT+TGG - chr4_3:63238262-63238281 Msa0654880:intron 30.0%
! TATCTTCATCTGATTTTTGC+AGG + chr4_3:63238295-63238314 None:intergenic 30.0%
! TATTGCTTCTAATTGATGGT+TGG - chr4_3:63238450-63238469 Msa0654880:intron 30.0%
GGACTAAAGAGAAAAAGTAA+GGG + chr4_3:63238689-63238708 None:intergenic 30.0%
TGGACTAAAGAGAAAAAGTA+AGG + chr4_3:63238690-63238709 None:intergenic 30.0%
!!! TTACTTTTTCTCTTTAGTCC+AGG - chr4_3:63238689-63238708 Msa0654880:intron 30.0%
AACAATGCAAAATAGGGATA+AGG + chr4_3:63238776-63238795 None:intergenic 30.0%
AAGAACAGATTATAGGTGAA+GGG + chr4_3:63238854-63238873 None:intergenic 30.0%
AAAGAACAGATTATAGGTGA+AGG + chr4_3:63238855-63238874 None:intergenic 30.0%
CCTCTTTAGTATCATTTAAG+TGG + chr4_3:63238896-63238915 None:intergenic 30.0%
CCACTTAAATGATACTAAAG+AGG - chr4_3:63238893-63238912 Msa0654880:intron 30.0%
AGCAACTTACTCTGTAAATA+AGG - chr4_3:63238925-63238944 Msa0654880:intron 30.0%
GCAACTTACTCTGTAAATAA+GGG - chr4_3:63238926-63238945 Msa0654880:intron 30.0%
CAACTTACTCTGTAAATAAG+GGG - chr4_3:63238927-63238946 Msa0654880:intron 30.0%
AACTTACTCTGTAAATAAGG+GGG - chr4_3:63238928-63238947 Msa0654880:intron 30.0%
TTTCAGACATCGTTAAAACA+CGG - chr4_3:63238983-63239002 Msa0654880:three_prime_UTR 30.0%
TTTAGGAAATAAGTAGCATG+TGG - chr4_3:63239054-63239073 Msa0654880:three_prime_UTR 30.0%
TTACTATTAGAACAACTGAG+GGG + chr4_3:63239318-63239337 None:intergenic 30.0%
GTTACTATTAGAACAACTGA+GGG + chr4_3:63239319-63239338 None:intergenic 30.0%
TGTTACTATTAGAACAACTG+AGG + chr4_3:63239320-63239339 None:intergenic 30.0%
! ATAGTAACATCCCAACTTTT+TGG - chr4_3:63239331-63239350 Msa0654880:intron 30.0%
AACATCATCATTATATTGGG+TGG + chr4_3:63239362-63239381 None:intergenic 30.0%
!! AAGTAAAGCATTGCAAAAGA+AGG - chr4_3:63239831-63239850 Msa0654880:intron 30.0%
!! AGTAAAGCATTGCAAAAGAA+GGG - chr4_3:63239832-63239851 Msa0654880:intron 30.0%
TATTGCATGCAGTCATATTT+GGG + chr4_3:63239880-63239899 None:intergenic 30.0%
ATATTGCATGCAGTCATATT+TGG + chr4_3:63239881-63239900 None:intergenic 30.0%
AGATGTTGAGTATTAGTGTT+TGG - chr4_3:63239950-63239969 Msa0654880:intron 30.0%
GTAATAGAGTCATACTTTGA+TGG - chr4_3:63240024-63240043 Msa0654880:intron 30.0%
TAACTTCACTTTACTTATGC+AGG - chr4_3:63240140-63240159 Msa0654880:intron 30.0%
AAAGAACTTATCAGGATGAT+GGG + chr4_3:63240189-63240208 None:intergenic 30.0%
AAAAGAACTTATCAGGATGA+TGG + chr4_3:63240190-63240209 None:intergenic 30.0%
! ATCATCCTGATAAGTTCTTT+TGG - chr4_3:63240189-63240208 Msa0654880:three_prime_UTR 30.0%
TCATGACAATGAATGATATC+TGG + chr4_3:63240308-63240327 None:intergenic 30.0%
TTACTCAAAGAGCAAAAGTT+TGG + chr4_3:63240375-63240394 None:intergenic 30.0%
! AGCTGAATTTAATCCTTTTG+GGG + chr4_3:63240458-63240477 None:intergenic 30.0%
! CTAGCTGAATTTAATCCTTT+TGG + chr4_3:63240460-63240479 None:intergenic 30.0%
CAAAAGGATTAAATTCAGCT+AGG - chr4_3:63240458-63240477 Msa0654880:intron 30.0%
! AGTTTACCTTCCAATGTTTT+AGG - chr4_3:63240686-63240705 Msa0654880:intron 30.0%
! GTTTACCTTCCAATGTTTTA+GGG - chr4_3:63240687-63240706 Msa0654880:intron 30.0%
! TGTGCATATTAGGTATTTTC+TGG - chr4_3:63240801-63240820 Msa0654880:intron 30.0%
! GTTATTCAAAGTTGATCTTG+TGG + chr4_3:63240889-63240908 None:intergenic 30.0%
GTCAACATAGATGCAATTAT+AGG + chr4_3:63240919-63240938 None:intergenic 30.0%
!! TTTAGATGAAGGTATCAGAA+TGG + chr4_3:63241036-63241055 None:intergenic 30.0%
GCATCAAATTCTTCAACATT+TGG + chr4_3:63241107-63241126 None:intergenic 30.0%
TGGTTCTTAAGAATAGACAA+AGG - chr4_3:63241296-63241315 Msa0654880:intron 30.0%
TTTCGTGTAACAATGTCAAA+TGG + chr4_3:63241379-63241398 None:intergenic 30.0%
GATCAATAGCAAATTCATTC+CGG + chr4_3:63241447-63241466 None:intergenic 30.0%
!! ATGGTATTGACACTGATATA+TGG - chr4_3:63241684-63241703 Msa0654880:three_prime_UTR 30.0%
GAAACCAAAAAGCAAGTTAA+GGG + chr4_3:63242025-63242044 None:intergenic 30.0%
!!! TGGTCCCTTAACTTATTTTT+TGG - chr4_3:63242049-63242068 Msa0654880:intron 30.0%
!!! TGGTCCCTTAACTTATTTTT+TGG + chr4_3:63242049-63242068 None:intergenic 30.0%
!!! GTTATGTGTTGGTTACATTT+TGG + chr4_3:63242204-63242223 None:intergenic 30.0%
TGTAACCAACACATAACTTA+AGG - chr4_3:63242207-63242226 Msa0654880:intron 30.0%
GTAACCAACACATAACTTAA+GGG - chr4_3:63242208-63242227 Msa0654880:intron 30.0%
CTCAAAATCTCAAGTCTAAT+AGG + chr4_3:63242464-63242483 None:intergenic 30.0%
!!! GAGATTTTGAGACTTTAGAT+TGG - chr4_3:63242473-63242492 Msa0654880:intron 30.0%
!!! ACACATTCACAGACTTTTTT+TGG + chr4_3:63242582-63242601 None:intergenic 30.0%
TAAATTCCTAGAATTTGGAC+TGG + chr4_3:63242671-63242690 None:intergenic 30.0%
! ATAAGATGAACACCTTTTTG+TGG + chr4_3:63242930-63242949 None:intergenic 30.0%
ACATGCAATATATCTAACAC+TGG - chr4_3:63242953-63242972 Msa0654880:intron 30.0%
TAAGGAAAGAAAATATGACC+TGG + chr4_3:63243028-63243047 None:intergenic 30.0%
TCCTTATAGCTGAAATTTAG+TGG - chr4_3:63243042-63243061 Msa0654880:intron 30.0%
ACCACTAAATTTCAGCTATA+AGG + chr4_3:63243046-63243065 None:intergenic 30.0%
AAGTCAACTTAGAATAAAGG+TGG - chr4_3:63243113-63243132 Msa0654880:intron 30.0%
! TTTCTTAATTCCCGTGATTT+TGG + chr4_3:63243198-63243217 None:intergenic 30.0%
! CAAAATAAATAGGAGTATGG+TGG - chr4_3:63243370-63243389 Msa0654880:CDS 30.0%
TGTAATTGGAAATACCAAAG+GGG - chr4_3:63243408-63243427 Msa0654880:CDS 30.0%
! AAGGGTCTTATAATTAGAGA+CGG - chr4_3:63243463-63243482 Msa0654880:CDS 30.0%
CTGTTACTATATATAACCAG+AGG - chr4_3:63243558-63243577 Msa0654880:CDS 30.0%
CTAAACTAAATCAGTCAGAA+AGG + chr4_3:63243647-63243666 None:intergenic 30.0%
GACAATGCATAAAATATGCA+AGG - chr4_3:63243887-63243906 Msa0654880:CDS 30.0%
!!! GAGTTTATTTTTTTTGGTGG+TGG + chr4_3:63243932-63243951 None:intergenic 30.0%
AGAAAATATGGGGAATGAAT+GGG + chr4_3:63244041-63244060 None:intergenic 30.0%
ATCAGTTGACAGAAAATATG+GGG + chr4_3:63244051-63244070 None:intergenic 30.0%
! ATTCTCTAGAGAGAATTTGA+AGG - chr4_3:63244083-63244102 Msa0654880:CDS 30.0%
TGTTGTCATGATTCTTGAAA+TGG + chr4_3:63244118-63244137 None:intergenic 30.0%
TCAAGAATCATGACAACATA+AGG - chr4_3:63244120-63244139 Msa0654880:CDS 30.0%
AAACATGTATCACGTAAGAA+TGG + chr4_3:63244317-63244336 None:intergenic 30.0%
! CACGTAATTTTACTTCATTC+AGG + chr4_3:63244482-63244501 None:intergenic 30.0%
TATGATCATCTTTGTACAGT+TGG + chr4_3:63244514-63244533 None:intergenic 30.0%
TCATCTGCAGGAAATATATT+AGG + chr4_3:63244618-63244637 None:intergenic 30.0%
CAGATGATTTCAATGAGATA+TGG - chr4_3:63244631-63244650 Msa0654880:intron 30.0%
ATACAATACCTTCACAGTTT+CGG - chr4_3:63244789-63244808 Msa0654880:intron 30.0%
TTTCATGATAGAGTAGGTAA+TGG - chr4_3:63244898-63244917 Msa0654880:intron 30.0%
TTCATGATAGAGTAGGTAAT+GGG - chr4_3:63244899-63244918 Msa0654880:intron 30.0%
CATAGACTAAAGTTGCAATT+AGG + chr4_3:63245058-63245077 None:intergenic 30.0%
! TAAAAACAGAGGAACTTGTT+TGG + chr4_3:63245123-63245142 None:intergenic 30.0%
!! GTGCCTAATTTTAAAAACAG+AGG + chr4_3:63245134-63245153 None:intergenic 30.0%
TTGATAGATGAGAATGTTGA+AGG + chr4_3:63245236-63245255 None:intergenic 30.0%
!! TTTTATGCTGTTTATTGCTC+TGG - chr4_3:63245266-63245285 Msa0654880:intron 30.0%
!! TCTAATGACACAATTTTGAC+AGG - chr4_3:63245294-63245313 Msa0654880:intron 30.0%
!! CTAATGACACAATTTTGACA+GGG - chr4_3:63245295-63245314 Msa0654880:intron 30.0%
TAAGATTGAAATGATAGCAC+AGG + chr4_3:63245515-63245534 None:intergenic 30.0%
! ATTCTAAAAACGTAGGAAAG+TGG + chr4_3:63245793-63245812 None:intergenic 30.0%
AATATGTCAACAGTGTACAA+AGG - chr4_3:63245810-63245829 Msa0654880:five_prime_UTR 30.0%
GTTGTAACCATTTACATGTA+TGG + chr4_3:63245836-63245855 None:intergenic 30.0%
TCTGAATTGATCCTTCAATG+GGG + chr4_3:63236231-63236250 None:intergenic 35.0%
! GAATCATCGTGATCAGATTT+TGG + chr4_3:63236568-63236587 None:intergenic 35.0%
TTAGTATCAGGCACTACAAT+TGG + chr4_3:63236610-63236629 None:intergenic 35.0%
! AAATTGCAAGGTGAGTTGAA+GGG + chr4_3:63236657-63236676 None:intergenic 35.0%
! TAAATTGCAAGGTGAGTTGA+AGG + chr4_3:63236658-63236677 None:intergenic 35.0%
TAGATATCTTGGAGAGCTTA+TGG + chr4_3:63236969-63236988 None:intergenic 35.0%
TAATGACGAAAGTCTTCAGA+AGG + chr4_3:63237255-63237274 None:intergenic 35.0%
CTCTAGCCTGATTTATAAGA+AGG + chr4_3:63237581-63237600 None:intergenic 35.0%
TGCACTTGAAGATCTTCAAA+AGG - chr4_3:63237605-63237624 Msa0654880:intron 35.0%
AAGTTAACGACTTAGAGATG+AGG - chr4_3:63237658-63237677 Msa0654880:intron 35.0%
! TTCTTCAGTACTACCCTTTT+CGG + chr4_3:63237781-63237800 None:intergenic 35.0%
TGCATGAGCTTCATAATGAT+AGG - chr4_3:63237814-63237833 Msa0654880:three_prime_UTR 35.0%
CAAGAACAATGATGAACGTT+TGG - chr4_3:63237932-63237951 Msa0654880:intron 35.0%
TATAGTGCTTGAAGAAAACC+AGG - chr4_3:63238142-63238161 Msa0654880:intron 35.0%
AAGAAAACCAGGATCTTCAA+AGG - chr4_3:63238153-63238172 Msa0654880:intron 35.0%
! ATAGACGTTAGCTTCTTCAA+GGG + chr4_3:63238201-63238220 None:intergenic 35.0%
! TATAGACGTTAGCTTCTTCA+AGG + chr4_3:63238202-63238221 None:intergenic 35.0%
!! TGCAAAGCTTTTGAGAGAAA+AGG - chr4_3:63238502-63238521 Msa0654880:intron 35.0%
! GATGTATATATGGCTTGCAA+AGG - chr4_3:63238551-63238570 Msa0654880:intron 35.0%
CAAAGGAAAAAATGAAGACG+AGG - chr4_3:63238568-63238587 Msa0654880:intron 35.0%
AGGCTATATCTGCATTTCTT+GGG - chr4_3:63238588-63238607 Msa0654880:intron 35.0%
GTAAGGGATGCATAAGATAA+TGG + chr4_3:63238673-63238692 None:intergenic 35.0%
TTCAATTCAAAACTCACACC+TGG + chr4_3:63238957-63238976 None:intergenic 35.0%
GATTTCAAAAATTCGCACGA+GGG + chr4_3:63239029-63239048 None:intergenic 35.0%
AGATTTCAAAAATTCGCACG+AGG + chr4_3:63239030-63239049 None:intergenic 35.0%
AGAACAACTCCCATTTGTAA+TGG + chr4_3:63239110-63239129 None:intergenic 35.0%
ATAGTAAAAAAAGGGCAACC+CGG - chr4_3:63239131-63239150 Msa0654880:intron 35.0%
TCTTGTGTAAAAACAGGGTA+AGG + chr4_3:63239223-63239242 None:intergenic 35.0%
!!! TTACCCTGTTTTTACACAAG+AGG - chr4_3:63239222-63239241 Msa0654880:intron 35.0%
ATTCTTCTAGGTATAAAGGG+AGG + chr4_3:63239552-63239571 None:intergenic 35.0%
AATGATGACAGGACATATCA+TGG + chr4_3:63239619-63239638 None:intergenic 35.0%
CTTGGAAGAACAATATGGAA+AGG + chr4_3:63239697-63239716 None:intergenic 35.0%
CTTTCCATATTGTTCTTCCA+AGG - chr4_3:63239695-63239714 Msa0654880:intron 35.0%
! GATTGAGTTGTTTCCATAAC+AGG - chr4_3:63239777-63239796 Msa0654880:intron 35.0%
ATACTCTTAAATCACCAACG+CGG + chr4_3:63239906-63239925 None:intergenic 35.0%
TTGATTATTCTTGCAGGCTT+TGG - chr4_3:63239996-63240015 Msa0654880:intron 35.0%
GCTCAATGAAATAAACAGGA+AGG + chr4_3:63240166-63240185 None:intergenic 35.0%
AAGAACTTATCAGGATGATG+GGG + chr4_3:63240188-63240207 None:intergenic 35.0%
!! TTTTGGAGAGGAGACTTTTA+TGG - chr4_3:63240206-63240225 Msa0654880:three_prime_UTR 35.0%
GCATATATGTCCCAGTATAA+AGG + chr4_3:63240436-63240455 None:intergenic 35.0%
TTCTATCTGGTCTGTTTAGA+TGG + chr4_3:63240564-63240583 None:intergenic 35.0%
TGATAGAGTCAATTCTGTCA+AGG - chr4_3:63240603-63240622 Msa0654880:intron 35.0%
! CTATGTTGACTAGATTGTTC+CGG - chr4_3:63240929-63240948 Msa0654880:intron 35.0%
! TATGTTGACTAGATTGTTCC+GGG - chr4_3:63240930-63240949 Msa0654880:intron 35.0%
TATATCCTACAATCCTTTCC+CGG + chr4_3:63240951-63240970 None:intergenic 35.0%
! AATCCATTTGGCTTAAAGCA+TGG + chr4_3:63241203-63241222 None:intergenic 35.0%
TCGCTAACTTGAAATCCATT+TGG + chr4_3:63241215-63241234 None:intergenic 35.0%
!! TGTCGATTTGCACATCAAAT+TGG + chr4_3:63241420-63241439 None:intergenic 35.0%
TTTGATGTGCAAATCGACAT+AGG - chr4_3:63241421-63241440 Msa0654880:three_prime_UTR 35.0%
TTATTGTACAAAATGCAGGG+AGG - chr4_3:63241605-63241624 Msa0654880:intron 35.0%
! AAGAACACCGATGAACTTTT+TGG + chr4_3:63241663-63241682 None:intergenic 35.0%
! AAGTTCATCGGTGTTCTTAA+TGG - chr4_3:63241665-63241684 Msa0654880:three_prime_UTR 35.0%
TACAGTGCAAATGATCTTCA+AGG - chr4_3:63241740-63241759 Msa0654880:three_prime_UTR 35.0%
ACAGTGCAAATGATCTTCAA+GGG - chr4_3:63241741-63241760 Msa0654880:three_prime_UTR 35.0%
AAGACCTAGATTCTTTCTCA+AGG + chr4_3:63241786-63241805 None:intergenic 35.0%
TTTCTTCTGCAGATGTTAAG+AGG - chr4_3:63241804-63241823 Msa0654880:three_prime_UTR 35.0%
TGGTCCCTTAAGTTATTTGT+TGG - chr4_3:63241898-63241917 Msa0654880:intron 35.0%
TGGTCCCTTAAGTTATTTGT+TGG - chr4_3:63241898-63241917 Msa0654880:intron 35.0%
CGAAACCAAAAAGCAAGTTA+AGG + chr4_3:63242026-63242045 None:intergenic 35.0%
!!! CTTGCTTTTTGGTTTCGTTT+TGG - chr4_3:63242029-63242048 Msa0654880:intron 35.0%
AATAACATAAAGGACCAGAG+TGG - chr4_3:63242095-63242114 Msa0654880:three_prime_UTR 35.0%
TGGTCCCTTAAGTTATTTGT+TGG + chr4_3:63241898-63241917 None:intergenic 35.0%
!! TGCTTTTTGGTAGCATTTTG+GGG + chr4_3:63242421-63242440 None:intergenic 35.0%
!!! CTGCTTTTTGGTAGCATTTT+GGG + chr4_3:63242422-63242441 None:intergenic 35.0%
!!! TCTGCTTTTTGGTAGCATTT+TGG + chr4_3:63242423-63242442 None:intergenic 35.0%
!! TTGGTTCTAGACAAACCATA+TGG - chr4_3:63242492-63242511 Msa0654880:intron 35.0%
!! TTTTGTCTGAAACTTTCCGA+TGG - chr4_3:63242534-63242553 Msa0654880:intron 35.0%
! ACAAGATTGGTTCCACAAAA+AGG - chr4_3:63242915-63242934 Msa0654880:intron 35.0%
AATATATCTAACACTGGAGC+TGG - chr4_3:63242959-63242978 Msa0654880:intron 35.0%
ATATATCTAACACTGGAGCT+GGG - chr4_3:63242960-63242979 Msa0654880:intron 35.0%
GAAAATATGACCTGGATATG+TGG + chr4_3:63243020-63243039 None:intergenic 35.0%
GCAAAAGGGTCCAATATTTA+GGG + chr4_3:63243176-63243195 None:intergenic 35.0%
! ACCAAAGGGGTCTTATAAAA+AGG - chr4_3:63243421-63243440 Msa0654880:CDS 35.0%
! CCAAAGGGGTCTTATAAAAA+GGG - chr4_3:63243422-63243441 Msa0654880:CDS 35.0%
ACGGAAGTAGTAATTACCTA+GGG - chr4_3:63243482-63243501 Msa0654880:CDS 35.0%
AGTAGTAATTACCTAGGGTA+TGG - chr4_3:63243487-63243506 Msa0654880:CDS 35.0%
TCAAGAATAATCCATACCCT+AGG + chr4_3:63243501-63243520 None:intergenic 35.0%
CTATATATAACCAGAGGTCT+CGG - chr4_3:63243564-63243583 Msa0654880:CDS 35.0%
AACTAAATCAGTCAGAAAGG+CGG + chr4_3:63243644-63243663 None:intergenic 35.0%
TGCATAAAATATGCAAGGTC+CGG - chr4_3:63243892-63243911 Msa0654880:CDS 35.0%
!!! TTATTTTTTTTGGTGGTGGC+CGG + chr4_3:63243928-63243947 None:intergenic 35.0%
!! TTTTGGAAGTAGACTGTTGA+TGG - chr4_3:63243995-63244014 Msa0654880:CDS 35.0%
CAGAAAATATGGGGAATGAA+TGG + chr4_3:63244042-63244061 None:intergenic 35.0%
GTCATGATTCTTGAAATGGT+TGG + chr4_3:63244114-63244133 None:intergenic 35.0%
TATCACGTAAGAATGGAACA+TGG + chr4_3:63244310-63244329 None:intergenic 35.0%
ATCTCATTGAAATCATCTGC+AGG + chr4_3:63244630-63244649 None:intergenic 35.0%
ATTTGTGAATGCTGATGAGA+AGG - chr4_3:63244823-63244842 Msa0654880:intron 35.0%
! CGTGTTTTTCATGATAGAGT+AGG - chr4_3:63244892-63244911 Msa0654880:intron 35.0%
TCATGATAGAGTAGGTAATG+GGG - chr4_3:63244900-63244919 Msa0654880:intron 35.0%
CAACTTTAGTCTATGTAGCT+TGG - chr4_3:63245063-63245082 Msa0654880:intron 35.0%
AGTCTATGTAGCTTGGATTA+TGG - chr4_3:63245070-63245089 Msa0654880:intron 35.0%
TTGCATTACGTATCTATAGC+AGG + chr4_3:63245174-63245193 None:intergenic 35.0%
TAAGGTAGGTTACGGAAAAT+AGG + chr4_3:63245209-63245228 None:intergenic 35.0%
AAGGTGAATAAGGTAGGTTA+CGG + chr4_3:63245217-63245236 None:intergenic 35.0%
ATGTTGAAGGTGAATAAGGT+AGG + chr4_3:63245223-63245242 None:intergenic 35.0%
GAGAATGTTGAAGGTGAATA+AGG + chr4_3:63245227-63245246 None:intergenic 35.0%
!! CAATTTTGACAGGGAATAGA+TGG - chr4_3:63245304-63245323 Msa0654880:intron 35.0%
!!! ACATGAACATCGATTTTAGC+TGG - chr4_3:63245395-63245414 Msa0654880:CDS 35.0%
!!! CATGAACATCGATTTTAGCT+GGG - chr4_3:63245396-63245415 Msa0654880:CDS 35.0%
TACTTAAAGTCTGTGACTAG+AGG - chr4_3:63245448-63245467 Msa0654880:CDS 35.0%
CAATTAGAGATGTTCTTGCA+TGG + chr4_3:63245610-63245629 None:intergenic 35.0%
AGACTACTTTAAATGTGACG+TGG - chr4_3:63245643-63245662 Msa0654880:CDS 35.0%
! AAGTGAGAAATGTTGCTTCA+TGG + chr4_3:63245698-63245717 None:intergenic 35.0%
!! GCAACATTTCTCACTTTTGA+TGG - chr4_3:63245702-63245721 Msa0654880:CDS 35.0%
!!! TCTCACTTTTGATGGATTCT+AGG - chr4_3:63245710-63245729 Msa0654880:CDS 35.0%
ACAAAGGCCATACATGTAAA+TGG - chr4_3:63245826-63245845 Msa0654880:five_prime_UTR 35.0%
! TGTCGCATTTTGCAAGATGA+TGG + chr4_3:63236358-63236377 None:intergenic 40.0%
! AGGTAAGGTACCTGAGAATA+CGG + chr4_3:63236384-63236403 None:intergenic 40.0%
TATCAGGCACTACAATTGGA+CGG + chr4_3:63236606-63236625 None:intergenic 40.0%
! AATTGCAAGGTGAGTTGAAG+GGG + chr4_3:63236656-63236675 None:intergenic 40.0%
GTTGCAAACATTGGAGACTT+AGG + chr4_3:63236697-63236716 None:intergenic 40.0%
GTCTCCAATGTTTGCAACTT+CGG - chr4_3:63236699-63236718 Msa0654880:intron 40.0%
CTATCCGAAGTTGCAAACAT+TGG + chr4_3:63236706-63236725 None:intergenic 40.0%
! TGCTTGTAGCGCTTTCTTTT+CGG + chr4_3:63237637-63237656 None:intergenic 40.0%
TAACGACTTAGAGATGAGGT+TGG - chr4_3:63237662-63237681 Msa0654880:intron 40.0%
AAAGACGCATGTTGAACTCA+TGG - chr4_3:63237722-63237741 Msa0654880:intron 40.0%
CGAATTAAGCTCCTCAGTAA+GGG + chr4_3:63237847-63237866 None:intergenic 40.0%
CCTTACTGAGGAGCTTAATT+CGG - chr4_3:63237845-63237864 Msa0654880:three_prime_UTR 40.0%
TTCTATGGCATTCTTCAGAG+AGG + chr4_3:63237886-63237905 None:intergenic 40.0%
GAACAATGATGAACGTTTGG+TGG - chr4_3:63237935-63237954 Msa0654880:intron 40.0%
! TGATGAACGTTTGGTGGTAT+TGG - chr4_3:63237941-63237960 Msa0654880:intron 40.0%
! ACGTTTGGTGGTATTGGAAA+AGG - chr4_3:63237947-63237966 Msa0654880:intron 40.0%
!!! GGAAAAGGAGCGCTTATTTT+TGG - chr4_3:63237962-63237981 Msa0654880:intron 40.0%
GACAGTTCAGATACATCTTC+CGG + chr4_3:63238029-63238048 None:intergenic 40.0%
CTTGCATTCAACTCTAAGTG+TGG + chr4_3:63238051-63238070 None:intergenic 40.0%
AAACCAGGATCTTCAAAGGA+AGG - chr4_3:63238157-63238176 Msa0654880:intron 40.0%
! AATTGACTCCAGAATTCCCA+CGG + chr4_3:63238431-63238450 None:intergenic 40.0%
!! AGCTTTTGAGAGAAAAGGTG+TGG - chr4_3:63238507-63238526 Msa0654880:intron 40.0%
GAGGCTATATCTGCATTTCT+TGG - chr4_3:63238587-63238606 Msa0654880:intron 40.0%
GATTCATATTGCAGCAGAGA+TGG - chr4_3:63238721-63238740 Msa0654880:intron 40.0%
AATGAATTCACCTTAGCCAC+TGG + chr4_3:63238749-63238768 None:intergenic 40.0%
CGTACAATACACCAAATGGT+GGG + chr4_3:63239197-63239216 None:intergenic 40.0%
CAGCCTCTTGTGTAAAAACA+GGG + chr4_3:63239228-63239247 None:intergenic 40.0%
ACAGCCTCTTGTGTAAAAAC+AGG + chr4_3:63239229-63239248 None:intergenic 40.0%
GGTGGTATTGCCAAAAAGTT+GGG + chr4_3:63239344-63239363 None:intergenic 40.0%
CTAGGTATAAAGGGAGGAAA+AGG + chr4_3:63239546-63239565 None:intergenic 40.0%
ACTCGACATAGAATGATGAC+AGG + chr4_3:63239630-63239649 None:intergenic 40.0%
!!! TCGCAGTGTTCTAGAGTTTT+GGG + chr4_3:63239654-63239673 None:intergenic 40.0%
!!! ATCGCAGTGTTCTAGAGTTT+TGG + chr4_3:63239655-63239674 None:intergenic 40.0%
CCATCCTTGGAAGAACAATA+TGG + chr4_3:63239702-63239721 None:intergenic 40.0%
CCATATTGTTCTTCCAAGGA+TGG - chr4_3:63239699-63239718 Msa0654880:intron 40.0%
! GAGTTGTTTCCATAACAGGT+TGG - chr4_3:63239781-63239800 Msa0654880:intron 40.0%
! TTGTTTCCATAACAGGTTGG+TGG - chr4_3:63239784-63239803 Msa0654880:intron 40.0%
! TGGGAAGTACGATTTCAACA+AGG + chr4_3:63239861-63239880 None:intergenic 40.0%
TGGGGCTCAATGAAATAAAC+AGG + chr4_3:63240170-63240189 None:intergenic 40.0%
CCTCTCCAAAAGAACTTATC+AGG + chr4_3:63240197-63240216 None:intergenic 40.0%
!! CCTGATAAGTTCTTTTGGAG+AGG - chr4_3:63240194-63240213 Msa0654880:three_prime_UTR 40.0%
GAAGAAACTCAAGTGCTACA+CGG + chr4_3:63240268-63240287 None:intergenic 40.0%
CTTGAGTTTCTTCTTCAAGC+TGG - chr4_3:63240275-63240294 Msa0654880:three_prime_UTR 40.0%
TATCTGGTCTGTTTAGATGG+TGG + chr4_3:63240561-63240580 None:intergenic 40.0%
AAACAGACCAGATAGAATGC+AGG - chr4_3:63240567-63240586 Msa0654880:intron 40.0%
!!! TACCTTCCAATGTTTTAGGG+TGG - chr4_3:63240690-63240709 Msa0654880:intron 40.0%
ACAACTCCACCCTAAAACAT+TGG + chr4_3:63240699-63240718 None:intergenic 40.0%
TTCTCGCTCTTGTGCATATT+AGG - chr4_3:63240791-63240810 Msa0654880:intron 40.0%
AAAGCAAGCAGCACTCATAA+CGG - chr4_3:63240861-63240880 Msa0654880:intron 40.0%
! CAGCAGAGTTTCTTTCAAGT+GGG - chr4_3:63241165-63241184 Msa0654880:intron 40.0%
! TGTCCATGCTTTAAGCCAAA+TGG - chr4_3:63241197-63241216 Msa0654880:intron 40.0%
TGCACATCAAATTGGACTTC+TGG + chr4_3:63241412-63241431 None:intergenic 40.0%
TACAAAATGCAGGGAGGTAA+AGG - chr4_3:63241611-63241630 Msa0654880:intron 40.0%
ACCCACTCCAAAAAGTTCAT+CGG - chr4_3:63241653-63241672 Msa0654880:intron 40.0%
!!! ACCGATGAACTTTTTGGAGT+GGG + chr4_3:63241657-63241676 None:intergenic 40.0%
TCAAGAAATGGATCAGTAGC+AGG + chr4_3:63241713-63241732 None:intergenic 40.0%
CTGTACTGGACTTCAAGAAA+TGG + chr4_3:63241725-63241744 None:intergenic 40.0%
GAAGATCATTTGCACTGTAC+TGG + chr4_3:63241739-63241758 None:intergenic 40.0%
TCAAGGGAAAGCAGAGAATA+AGG - chr4_3:63241757-63241776 Msa0654880:three_prime_UTR 40.0%
GAAGCCTTGAGAAAGAATCT+AGG - chr4_3:63241779-63241798 Msa0654880:three_prime_UTR 40.0%
!!! TGGTCCCTTAACTTGCTTTT+TGG - chr4_3:63242018-63242037 Msa0654880:intron 40.0%
TGGTCCCTTAAGTTATGTGT+TGG + chr4_3:63242215-63242234 None:intergenic 40.0%
!! GCTTTTTGGTAGCATTTTGG+GGG + chr4_3:63242420-63242439 None:intergenic 40.0%
!! TGCACACACATTCTGCTTTT+TGG + chr4_3:63242434-63242453 None:intergenic 40.0%
GCAGAATGTGTGTGCATATT+TGG - chr4_3:63242438-63242457 Msa0654880:intron 40.0%
! GTTCTAGACAAACCATATGG+AGG - chr4_3:63242495-63242514 Msa0654880:intron 40.0%
! TTTCCGATGGTAGTGAATAG+TGG - chr4_3:63242547-63242566 Msa0654880:intron 40.0%
AAGTCCTGCAAACTCTATCA+TGG + chr4_3:63242616-63242635 None:intergenic 40.0%
TTACCTCCAGTCCAAATTCT+AGG - chr4_3:63242662-63242681 Msa0654880:intron 40.0%
! ATTCCTAGAATTTGGACTGG+AGG + chr4_3:63242668-63242687 None:intergenic 40.0%
GGTCTCATTTGCTTCTTTGT+TGG - chr4_3:63242755-63242774 Msa0654880:intron 40.0%
! GGAGGTCAATTTGTTCTACT+TGG - chr4_3:63242981-63243000 Msa0654880:intron 40.0%
! TAGCTGACTCCATTCTAAAG+TGG + chr4_3:63243077-63243096 None:intergenic 40.0%
CTACCTCTGTCCCTAAATAT+TGG - chr4_3:63243163-63243182 Msa0654880:intron 40.0%
GGCAAAAGGGTCCAATATTT+AGG + chr4_3:63243177-63243196 None:intergenic 40.0%
!! TTCCCGTGATTTTGGCAAAA+GGG + chr4_3:63243190-63243209 None:intergenic 40.0%
!! ATTCCCGTGATTTTGGCAAA+AGG + chr4_3:63243191-63243210 None:intergenic 40.0%
! CCCTTTTTATAAGACCCCTT+TGG + chr4_3:63243425-63243444 None:intergenic 40.0%
GACGGAAGTAGTAATTACCT+AGG - chr4_3:63243481-63243500 Msa0654880:CDS 40.0%
ACAATATTTACCGAGACCTC+TGG + chr4_3:63243577-63243596 None:intergenic 40.0%
GCATAAAATATGCAAGGTCC+GGG - chr4_3:63243893-63243912 Msa0654880:CDS 40.0%
CATAAAATATGCAAGGTCCG+GGG - chr4_3:63243894-63243913 Msa0654880:CDS 40.0%
!!! TATTTTTTTTGGTGGTGGCC+GGG + chr4_3:63243927-63243946 None:intergenic 40.0%
AGACGCAGCATAAATGGTAT+GGG + chr4_3:63244174-63244193 None:intergenic 40.0%
!! GTGCAGAAAATGGATTTTGG+TGG + chr4_3:63244460-63244479 None:intergenic 40.0%
!! CAGGTGCAGAAAATGGATTT+TGG + chr4_3:63244463-63244482 None:intergenic 40.0%
CTTCATTCAGGTGCAGAAAA+TGG + chr4_3:63244470-63244489 None:intergenic 40.0%
! ATTTAGGCCACCAGTTTTTC+TGG + chr4_3:63244671-63244690 None:intergenic 40.0%
! GCTATGCTAACCTGTCATTT+AGG + chr4_3:63244687-63244706 None:intergenic 40.0%
ATACCTTCACAGTTTCGGAA+TGG - chr4_3:63244794-63244813 Msa0654880:intron 40.0%
AATCCATTCCGAAACTGTGA+AGG + chr4_3:63244800-63244819 None:intergenic 40.0%
! CTTTTCATCCCAGCTAAAGA+AGG + chr4_3:63244950-63244969 None:intergenic 40.0%
GAGATTAATTGCGCGTACTA+AGG + chr4_3:63245332-63245351 None:intergenic 40.0%
TACGCGCAATTAATCTCTTC+AGG - chr4_3:63245335-63245354 Msa0654880:intron 40.0%
ACGCGCAATTAATCTCTTCA+GGG - chr4_3:63245336-63245355 Msa0654880:intron 40.0%
! TTGGAAGCAACTTGTTCAGA+AGG - chr4_3:63245372-63245391 Msa0654880:CDS 40.0%
TTCTTCAGCAGCACAATATG+AGG - chr4_3:63245420-63245439 Msa0654880:CDS 40.0%
ATCAGTTTCCAACACAGAGA+TGG - chr4_3:63245534-63245553 Msa0654880:intron 40.0%
TAGAGATGTTCTTGCATGGA+AGG + chr4_3:63245606-63245625 None:intergenic 40.0%
! CTAATCTAGCAGCACGTTTT+AGG + chr4_3:63245672-63245691 None:intergenic 40.0%
TTCAATGGGGAACGAGAAAG+AGG + chr4_3:63236218-63236237 None:intergenic 45.0%
TCTTTCTCGTTCCCCATTGA+AGG - chr4_3:63236217-63236236 Msa0654880:three_prime_UTR 45.0%
TGAAAGAATGGCTTCGAAGC+TGG - chr4_3:63236252-63236271 Msa0654880:three_prime_UTR 45.0%
! GAAATGGAGAGCACATTACG+CGG + chr4_3:63236336-63236355 None:intergenic 45.0%
! TAAGGTACCTGAGAATACGG+TGG + chr4_3:63236381-63236400 None:intergenic 45.0%
TCACAGCCATCTTCCATTGA+CGG - chr4_3:63236517-63236536 Msa0654880:three_prime_UTR 45.0%
! TGCAGCTCGCTAGTTTCTTT+AGG - chr4_3:63236795-63236814 Msa0654880:intron 45.0%
CTCTGCTCCGTTTACATTCA+AGG + chr4_3:63237382-63237401 None:intergenic 45.0%
ACAGTTGTCTGGTGGTCAAT+TGG - chr4_3:63237410-63237429 Msa0654880:intron 45.0%
! GTTCAACATGCGTCTTTTCC+TGG + chr4_3:63237719-63237738 None:intergenic 45.0%
ACGCATGTTGAACTCATGGA+GGG - chr4_3:63237726-63237745 Msa0654880:intron 45.0%
CATTACGCAGTTTCTCCAAC+TGG + chr4_3:63237752-63237771 None:intergenic 45.0%
GGAGAAACTGCGTAATGAGT+TGG - chr4_3:63237755-63237774 Msa0654880:intron 45.0%
! CGTAATGAGTTGGCCGAAAA+GGG - chr4_3:63237765-63237784 Msa0654880:three_prime_UTR 45.0%
TAAGCTCCTCAGTAAGGGAA+CGG + chr4_3:63237842-63237861 None:intergenic 45.0%
CCGAATTAAGCTCCTCAGTA+AGG + chr4_3:63237848-63237867 None:intergenic 45.0%
!! AAGCACTATAACGGCTTGGT+CGG + chr4_3:63238132-63238151 None:intergenic 45.0%
CTTCAAGCACTATAACGGCT+TGG + chr4_3:63238136-63238155 None:intergenic 45.0%
! CAACCTTCCTTTGAAGATCC+TGG + chr4_3:63238163-63238182 None:intergenic 45.0%
AGAAAGCAAGAGAAAGACGC+TGG - chr4_3:63238385-63238404 Msa0654880:intron 45.0%
AAGATATGCCGTGGGAATTC+TGG - chr4_3:63238420-63238439 Msa0654880:intron 45.0%
CTGTAAATAAGGGGGATACC+AGG - chr4_3:63238936-63238955 Msa0654880:intron 45.0%
GCGTACAATACACCAAATGG+TGG + chr4_3:63239198-63239217 None:intergenic 45.0%
GCTGCGTACAATACACCAAA+TGG + chr4_3:63239201-63239220 None:intergenic 45.0%
! TTACACAAGAGGCTGTTTCC+AGG - chr4_3:63239233-63239252 Msa0654880:intron 45.0%
GTTGTTGTCATGTGACCGTA+AGG + chr4_3:63239273-63239292 None:intergenic 45.0%
GGGTGGTATTGCCAAAAAGT+TGG + chr4_3:63239345-63239364 None:intergenic 45.0%
AGAAGATCATGCACCATCCT+TGG + chr4_3:63239715-63239734 None:intergenic 45.0%
!! ATTCTTGCAGGCTTTGGATG+TGG - chr4_3:63240002-63240021 Msa0654880:intron 45.0%
CCTGGCAGAGTAGCATAATA+AGG + chr4_3:63240411-63240430 None:intergenic 45.0%
CCTTATTATGCTACTCTGCC+AGG - chr4_3:63240408-63240427 Msa0654880:intron 45.0%
TGGGACATATATGCCCCAAA+AGG - chr4_3:63240442-63240461 Msa0654880:intron 45.0%
TGCCACAACTTTGAGTACCA+AGG - chr4_3:63240493-63240512 Msa0654880:intron 45.0%
GCCACAACTTTGAGTACCAA+GGG - chr4_3:63240494-63240513 Msa0654880:intron 45.0%
TCCCTTGGTACTCAAAGTTG+TGG + chr4_3:63240498-63240517 None:intergenic 45.0%
GCTTCAGAGTTGGAATCATG+TGG - chr4_3:63240526-63240545 Msa0654880:intron 45.0%
GAGTTGTCCTGCATTCTATC+TGG + chr4_3:63240577-63240596 None:intergenic 45.0%
CTCCACCCTAAAACATTGGA+AGG + chr4_3:63240695-63240714 None:intergenic 45.0%
TCACTTCTTGGGCGTAAGTA+GGG + chr4_3:63240749-63240768 None:intergenic 45.0%
CTCCACAGTTCTCACTTCTT+GGG + chr4_3:63240760-63240779 None:intergenic 45.0%
TGACTAGATTGTTCCGGGAA+AGG - chr4_3:63240935-63240954 Msa0654880:intron 45.0%
TTGTTCCGGGAAAGGATTGT+AGG - chr4_3:63240943-63240962 Msa0654880:intron 45.0%
CCACTTGAAAGAAACTCTGC+TGG + chr4_3:63241167-63241186 None:intergenic 45.0%
CCAGCAGAGTTTCTTTCAAG+TGG - chr4_3:63241164-63241183 Msa0654880:intron 45.0%
ATGTGCAAATCGACATAGGC+CGG - chr4_3:63241425-63241444 Msa0654880:three_prime_UTR 45.0%
!!! CTTTTTGGAGTGGGTAGAGA+GGG + chr4_3:63241648-63241667 None:intergenic 45.0%
!!! ACTTTTTGGAGTGGGTAGAG+AGG + chr4_3:63241649-63241668 None:intergenic 45.0%
!! CACCGATGAACTTTTTGGAG+TGG + chr4_3:63241658-63241677 None:intergenic 45.0%
TGCAGATGTTAAGAGGCCAT+TGG - chr4_3:63241811-63241830 Msa0654880:three_prime_UTR 45.0%
TAAAGGACCAGAGTGGTTGA+CGG - chr4_3:63242102-63242121 Msa0654880:three_prime_UTR 45.0%
GGTTGACGGAGTAAGAGTTA+AGG - chr4_3:63242116-63242135 Msa0654880:three_prime_UTR 45.0%
CTAGACAAACCATATGGAGG+TGG - chr4_3:63242498-63242517 Msa0654880:intron 45.0%
CCACCACTATTCACTACCAT+CGG + chr4_3:63242553-63242572 None:intergenic 45.0%
! ATGGTAGTGAATAGTGGTGG+TGG - chr4_3:63242553-63242572 Msa0654880:intron 45.0%
AAGTCTGTGAATGTGTTGCG+AGG - chr4_3:63242586-63242605 Msa0654880:intron 45.0%
AGTCTGTGAATGTGTTGCGA+GGG - chr4_3:63242587-63242606 Msa0654880:intron 45.0%
GATGCCATGATAGAGTTTGC+AGG - chr4_3:63242609-63242628 Msa0654880:intron 45.0%
! GGTTGGCTGCATAACAAGAT+TGG - chr4_3:63242902-63242921 Msa0654880:intron 45.0%
AAGTCCAGTTCCACATATCC+AGG - chr4_3:63243007-63243026 Msa0654880:intron 45.0%
ATGACCTGGATATGTGGAAC+TGG + chr4_3:63243014-63243033 None:intergenic 45.0%
GGTCCAATATTTAGGGACAG+AGG + chr4_3:63243169-63243188 None:intergenic 45.0%
! GGACCCTTTTGCCAAAATCA+CGG - chr4_3:63243184-63243203 Msa0654880:intron 45.0%
! GACCCTTTTGCCAAAATCAC+GGG - chr4_3:63243185-63243204 Msa0654880:intron 45.0%
! TGAGCTTAGCTCAGTTGGTA+TGG - chr4_3:63243865-63243884 Msa0654880:CDS 45.0%
!!! ATTTTTTTTGGTGGTGGCCG+GGG + chr4_3:63243926-63243945 None:intergenic 45.0%
CAGACGCAGCATAAATGGTA+TGG + chr4_3:63244175-63244194 None:intergenic 45.0%
CATGTCAGACGCAGCATAAA+TGG + chr4_3:63244180-63244199 None:intergenic 45.0%
CCACAAGGTTCAAAGATCGA+TGG + chr4_3:63244212-63244231 None:intergenic 45.0%
CCATCGATCTTTGAACCTTG+TGG - chr4_3:63244209-63244228 Msa0654880:CDS 45.0%
TGAACAGCCATACCTGTGTT+AGG + chr4_3:63244235-63244254 None:intergenic 45.0%
GTTCCTATCGCCAGAAAAAC+TGG - chr4_3:63244658-63244677 Msa0654880:intron 45.0%
AAACTGGTGGCCTAAATGAC+AGG - chr4_3:63244674-63244693 Msa0654880:intron 45.0%
!! GATAGAGTAGGTAATGGGGT+AGG - chr4_3:63244904-63244923 Msa0654880:intron 45.0%
!! AGTAGGTAATGGGGTAGGTT+TGG - chr4_3:63244909-63244928 Msa0654880:intron 45.0%
!! GTAGGTAATGGGGTAGGTTT+GGG - chr4_3:63244910-63244929 Msa0654880:intron 45.0%
TTCATCCCAGCTAAAGAAGG+AGG + chr4_3:63244947-63244966 None:intergenic 45.0%
CACTCTCACACTCTCTTGTA+TGG + chr4_3:63245031-63245050 None:intergenic 45.0%
CAAGTTGCTTCCAACTCTCA+GGG + chr4_3:63245366-63245385 None:intergenic 45.0%
ACAAGTTGCTTCCAACTCTC+AGG + chr4_3:63245367-63245386 None:intergenic 45.0%
CTGATCTACCATCTCTGTGT+TGG + chr4_3:63245545-63245564 None:intergenic 45.0%
AAATATCCCCATGCGGGATG+CGG - chr4_3:63236137-63236156 Msa0654880:three_prime_UTR 50.0%
! GTCTTTGGGTTCACTCAGTG+AGG + chr4_3:63236178-63236197 None:intergenic 50.0%
GGACACACAGGCTTGTCTTT+GGG + chr4_3:63236192-63236211 None:intergenic 50.0%
AGGACACACAGGCTTGTCTT+TGG + chr4_3:63236193-63236212 None:intergenic 50.0%
AGAAAGAGGACAGGACACAC+AGG + chr4_3:63236204-63236223 None:intergenic 50.0%
GTGTGCTGCAATTTGAGCAG+CGG - chr4_3:63236286-63236305 Msa0654880:three_prime_UTR 50.0%
! TGAGTTGAAGGGGATACCGA+GGG + chr4_3:63236646-63236665 None:intergenic 50.0%
GAATGTAAACGGAGCAGAGC+AGG - chr4_3:63237383-63237402 Msa0654880:intron 50.0%
GACGCATGTTGAACTCATGG+AGG - chr4_3:63237725-63237744 Msa0654880:intron 50.0%
! GCGTAATGAGTTGGCCGAAA+AGG - chr4_3:63237764-63237783 Msa0654880:three_prime_UTR 50.0%
TAGGATCCGTTCCCTTACTG+AGG - chr4_3:63237833-63237852 Msa0654880:three_prime_UTR 50.0%
AAAGACGCTGGATGAACCAG+TGG - chr4_3:63238397-63238416 Msa0654880:intron 50.0%
AACCAGTGGAAGATATGCCG+TGG - chr4_3:63238411-63238430 Msa0654880:intron 50.0%
ACCAGTGGAAGATATGCCGT+GGG - chr4_3:63238412-63238431 Msa0654880:intron 50.0%
GGCTTACATCGTCTGCAACA+AGG - chr4_3:63238609-63238628 Msa0654880:intron 50.0%
ACTAAAGCTCCCGCATATGC+AGG - chr4_3:63239157-63239176 Msa0654880:intron 50.0%
CTAAAGCTCCCGCATATGCA+GGG - chr4_3:63239158-63239177 Msa0654880:intron 50.0%
GACTTGAACCCGTGACCTTA+CGG - chr4_3:63239255-63239274 Msa0654880:intron 50.0%
TCATGTGACCGTAAGGTCAC+GGG + chr4_3:63239266-63239285 None:intergenic 50.0%
GTCATGTGACCGTAAGGTCA+CGG + chr4_3:63239267-63239286 None:intergenic 50.0%
CAACTTTACCAGTTGCGCCA+AGG - chr4_3:63239289-63239308 Msa0654880:intron 50.0%
GAACAACTGAGGGGTAACCT+TGG + chr4_3:63239309-63239328 None:intergenic 50.0%
!! TCCATAACAGGTTGGTGGCT+TGG - chr4_3:63239789-63239808 Msa0654880:intron 50.0%
!! CCATAACAGGTTGGTGGCTT+GGG - chr4_3:63239790-63239809 Msa0654880:intron 50.0%
!! CATAACAGGTTGGTGGCTTG+GGG - chr4_3:63239791-63239810 Msa0654880:intron 50.0%
!! ATAACAGGTTGGTGGCTTGG+GGG - chr4_3:63239792-63239811 Msa0654880:intron 50.0%
TGCATGCAATATGACCGCGT+TGG - chr4_3:63239889-63239908 Msa0654880:intron 50.0%
!! ATCTGGGTTGGCACTGTTGA+AGG - chr4_3:63240066-63240085 Msa0654880:intron 50.0%
TCTGCCAGGCTCCTTTATAC+TGG - chr4_3:63240422-63240441 Msa0654880:intron 50.0%
CTGCCAGGCTCCTTTATACT+GGG - chr4_3:63240423-63240442 Msa0654880:intron 50.0%
TGTCCCAGTATAAAGGAGCC+TGG + chr4_3:63240429-63240448 None:intergenic 50.0%
CACTTCTTGGGCGTAAGTAG+GGG + chr4_3:63240748-63240767 None:intergenic 50.0%
CTCACTTCTTGGGCGTAAGT+AGG + chr4_3:63240750-63240769 None:intergenic 50.0%
CCTCCACAGTTCTCACTTCT+TGG + chr4_3:63240761-63240780 None:intergenic 50.0%
CCAAGAAGTGAGAACTGTGG+AGG - chr4_3:63240758-63240777 Msa0654880:intron 50.0%
AGTGGGTAGAGAGGGTTGAA+TGG + chr4_3:63241640-63241659 None:intergenic 50.0%
TCTTACTCCGTCAACCACTC+TGG + chr4_3:63242112-63242131 None:intergenic 50.0%
AGACTGAGACCACCTCCATA+TGG + chr4_3:63242510-63242529 None:intergenic 50.0%
! CCGATGGTAGTGAATAGTGG+TGG - chr4_3:63242550-63242569 Msa0654880:intron 50.0%
TATCTAACACTGGAGCTGGG+AGG - chr4_3:63242963-63242982 Msa0654880:intron 50.0%
CTCTCTCTCTCTCTCTCTCA+AGG + chr4_3:63243274-63243293 None:intergenic 50.0%
TGAACCTTGTGGCCTAACAC+AGG - chr4_3:63244220-63244239 Msa0654880:CDS 50.0%
CATACCTGTGTTAGGCCACA+AGG + chr4_3:63244227-63244246 None:intergenic 50.0%
CTTGTGGCCTAACACAGGTA+TGG - chr4_3:63244225-63244244 Msa0654880:CDS 50.0%
!! CCACCAGTTTTTCTGGCGAT+AGG + chr4_3:63244664-63244683 None:intergenic 50.0%
CCTATCGCCAGAAAAACTGG+TGG - chr4_3:63244661-63244680 Msa0654880:intron 50.0%
CACGACAGCATCTGTGATGT+TGG + chr4_3:63244876-63244895 None:intergenic 50.0%
GTCTGTGACTAGAGGAAGAG+CGG - chr4_3:63245456-63245475 Msa0654880:CDS 50.0%
TGGGGAACGAGAAAGAGGAC+AGG + chr4_3:63236213-63236232 None:intergenic 55.0%
! TGGAGAGCACATTACGCGGT+GGG + chr4_3:63236332-63236351 None:intergenic 55.0%
! ATGGAGAGCACATTACGCGG+TGG + chr4_3:63236333-63236352 None:intergenic 55.0%
TGCGACACCACCGTATTCTC+AGG - chr4_3:63236371-63236390 Msa0654880:three_prime_UTR 55.0%
CAGCCATCTTCCATTGACGG+AGG - chr4_3:63236520-63236539 Msa0654880:three_prime_UTR 55.0%
CCTCCTCCGTCAATGGAAGA+TGG + chr4_3:63236526-63236545 None:intergenic 55.0%
CCATCTTCCATTGACGGAGG+AGG - chr4_3:63236523-63236542 Msa0654880:three_prime_UTR 55.0%
TCTTCCATTGACGGAGGAGG+AGG - chr4_3:63236526-63236545 Msa0654880:three_prime_UTR 55.0%
! GTGAGTTGAAGGGGATACCG+AGG + chr4_3:63236647-63236666 None:intergenic 55.0%
GAGCAGGCTGAACAGTTGTC+TGG - chr4_3:63237399-63237418 Msa0654880:intron 55.0%
CAGGCTGAACAGTTGTCTGG+TGG - chr4_3:63237402-63237421 Msa0654880:intron 55.0%
! GCGGATTGAAGTTGCTGACC+AGG - chr4_3:63237698-63237717 Msa0654880:intron 55.0%
TGAACTCATGGAGGGCCAGT+TGG - chr4_3:63237734-63237753 Msa0654880:intron 55.0%
TCCCACGGCATATCTTCCAC+TGG + chr4_3:63238416-63238435 None:intergenic 55.0%
AGAGATGGCACCAGTGGCTA+AGG - chr4_3:63238736-63238755 Msa0654880:intron 55.0%
! ATGCGGGAGCTTTAGTGCAC+CGG + chr4_3:63239153-63239172 None:intergenic 55.0%
AAGGTCACGGGTTCAAGTCC+TGG + chr4_3:63239254-63239273 None:intergenic 55.0%
CCCAAGCCACCAACCTGTTA+TGG + chr4_3:63239793-63239812 None:intergenic 55.0%
GACTGCAGCAGCTTCAGAGT+TGG - chr4_3:63240516-63240535 Msa0654880:intron 55.0%
CGCCCAAGAAGTGAGAACTG+TGG - chr4_3:63240755-63240774 Msa0654880:intron 55.0%
GGGTAGAGAGGGTTGAATGG+AGG + chr4_3:63241637-63241656 None:intergenic 55.0%
CCAACTGAGCTAAGCTCACG+AGG + chr4_3:63243863-63243882 None:intergenic 55.0%
CCTCGTGAGCTTAGCTCAGT+TGG - chr4_3:63243860-63243879 Msa0654880:CDS 55.0%
CCAGCTAAAGAAGGAGGCAG+GGG + chr4_3:63244941-63244960 None:intergenic 55.0%
CCCAGCTAAAGAAGGAGGCA+GGG + chr4_3:63244942-63244961 None:intergenic 55.0%
CCCTGCCTCCTTCTTTAGCT+GGG - chr4_3:63244939-63244958 Msa0654880:intron 55.0%
TCCCAGCTAAAGAAGGAGGC+AGG + chr4_3:63244943-63244962 None:intergenic 55.0%
TTTCTGCCGCATCCCGCATG+GGG + chr4_3:63236146-63236165 None:intergenic 60.0%
GTTTCTGCCGCATCCCGCAT+GGG + chr4_3:63236147-63236166 None:intergenic 60.0%
CATGCGGGATGCGGCAGAAA+CGG - chr4_3:63236146-63236165 Msa0654880:three_prime_UTR 60.0%
ATGCGGGATGCGGCAGAAAC+GGG - chr4_3:63236147-63236166 Msa0654880:three_prime_UTR 60.0%
TCCATTGACGGAGGAGGAGG+AGG - chr4_3:63236529-63236548 Msa0654880:three_prime_UTR 60.0%
TCCTCCTCCTCCTCCGTCAA+TGG + chr4_3:63236533-63236552 None:intergenic 60.0%
ATTGACGGAGGAGGAGGAGG+AGG - chr4_3:63236532-63236551 Msa0654880:three_prime_UTR 60.0%
TGAAGGGGATACCGAGGGTG+TGG + chr4_3:63236641-63236660 None:intergenic 60.0%
! GGTTGGCTGAGACTGATGCG+CGG - chr4_3:63237679-63237698 Msa0654880:intron 60.0%
TGCAGCAGAGATGGCACCAG+TGG - chr4_3:63238730-63238749 Msa0654880:intron 60.0%
! TGCGGGAGCTTTAGTGCACC+GGG + chr4_3:63239152-63239171 None:intergenic 60.0%
TTCCCGGACCCTGCATATGC+GGG + chr4_3:63239169-63239188 None:intergenic 60.0%
CTTCCCGGACCCTGCATATG+CGG + chr4_3:63239170-63239189 None:intergenic 60.0%
GCATATGCAGGGTCCGGGAA+GGG - chr4_3:63239169-63239188 Msa0654880:intron 60.0%
CATATGCAGGGTCCGGGAAG+GGG - chr4_3:63239170-63239189 Msa0654880:intron 60.0%
! CAAATGGTGGGACCCCTTCC+CGG + chr4_3:63239185-63239204 None:intergenic 60.0%
AGGGGTAACCTTGGCGCAAC+TGG + chr4_3:63239300-63239319 None:intergenic 60.0%
GGCTTGGGGGATGTTGTCAG+TGG - chr4_3:63239805-63239824 Msa0654880:intron 60.0%
CTGAAGCTGCTGCAGTCCCT+TGG + chr4_3:63240513-63240532 None:intergenic 60.0%
AAGGTCCGGGGTTCAAACCC+CGG - chr4_3:63243906-63243925 Msa0654880:CDS 60.0%
CCCCTGCCTCCTTCTTTAGC+TGG - chr4_3:63244938-63244957 Msa0654880:intron 60.0%
TCAGGGACGACCCTGAGAGT+TGG - chr4_3:63245353-63245372 Msa0654880:intron 60.0%
CGTTTCTGCCGCATCCCGCA+TGG + chr4_3:63236148-63236167 None:intergenic 65.0%
GCTCCCGCATATGCAGGGTC+CGG - chr4_3:63239163-63239182 Msa0654880:intron 65.0%
CTCCCGCATATGCAGGGTCC+GGG - chr4_3:63239164-63239183 Msa0654880:intron 65.0%
CGCATATGCAGGGTCCGGGA+AGG - chr4_3:63239168-63239187 Msa0654880:intron 65.0%
CGGGAAGGGGTCCCACCATT+TGG - chr4_3:63239183-63239202 Msa0654880:intron 65.0%
GGTGGCCGGGGTTTGAACCC+CGG + chr4_3:63243914-63243933 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr4_3 gene 63236088 63245917 63236088 ID=Msa0654880;Name=Msa0654880
chr4_3 mRNA 63236088 63245917 63236088 ID=Msa0654880-mRNA-1;Parent=Msa0654880;Name=Msa0654880-mRNA-1;_AED=0.05;_eAED=0.05;_QI=171|1|1|1|1|0.93|15|1997|488
chr4_3 exon 63236088 63236689 63236088 ID=Msa0654880-mRNA-1:exon:17744;Parent=Msa0654880-mRNA-1
chr4_3 exon 63237161 63237236 63237161 ID=Msa0654880-mRNA-1:exon:17743;Parent=Msa0654880-mRNA-1
chr4_3 exon 63237310 63237371 63237310 ID=Msa0654880-mRNA-1:exon:17742;Parent=Msa0654880-mRNA-1
chr4_3 exon 63237764 63237913 63237764 ID=Msa0654880-mRNA-1:exon:17741;Parent=Msa0654880-mRNA-1
chr4_3 exon 63238977 63239102 63238977 ID=Msa0654880-mRNA-1:exon:17740;Parent=Msa0654880-mRNA-1
chr4_3 exon 63240173 63240382 63240173 ID=Msa0654880-mRNA-1:exon:17739;Parent=Msa0654880-mRNA-1
chr4_3 exon 63241226 63241297 63241226 ID=Msa0654880-mRNA-1:exon:17738;Parent=Msa0654880-mRNA-1
chr4_3 exon 63241381 63241575 63241381 ID=Msa0654880-mRNA-1:exon:17737;Parent=Msa0654880-mRNA-1
chr4_3 exon 63241659 63241843 63241659 ID=Msa0654880-mRNA-1:exon:17736;Parent=Msa0654880-mRNA-1
chr4_3 exon 63241918 63241993 63241918 ID=Msa0654880-mRNA-1:exon:17735;Parent=Msa0654880-mRNA-1
chr4_3 exon 63242084 63242206 63242084 ID=Msa0654880-mRNA-1:exon:17734;Parent=Msa0654880-mRNA-1
chr4_3 exon 63243248 63244431 63243248 ID=Msa0654880-mRNA-1:exon:17733;Parent=Msa0654880-mRNA-1
chr4_3 exon 63244537 63244627 63244537 ID=Msa0654880-mRNA-1:exon:17732;Parent=Msa0654880-mRNA-1
chr4_3 exon 63245357 63245534 63245357 ID=Msa0654880-mRNA-1:exon:17731;Parent=Msa0654880-mRNA-1
chr4_3 exon 63245613 63245917 63245613 ID=Msa0654880-mRNA-1:exon:17730;Parent=Msa0654880-mRNA-1
chr4_3 five_prime_UTR 63245747 63245917 63245747 ID=Msa0654880-mRNA-1:five_prime_utr;Parent=Msa0654880-mRNA-1
chr4_3 CDS 63245613 63245746 63245613 ID=Msa0654880-mRNA-1:cds;Parent=Msa0654880-mRNA-1
chr4_3 CDS 63245357 63245534 63245357 ID=Msa0654880-mRNA-1:cds;Parent=Msa0654880-mRNA-1
chr4_3 CDS 63244537 63244627 63244537 ID=Msa0654880-mRNA-1:cds;Parent=Msa0654880-mRNA-1
chr4_3 CDS 63243368 63244431 63243368 ID=Msa0654880-mRNA-1:cds;Parent=Msa0654880-mRNA-1
chr4_3 three_prime_UTR 63243248 63243367 63243248 ID=Msa0654880-mRNA-1:three_prime_utr;Parent=Msa0654880-mRNA-1
chr4_3 three_prime_UTR 63242084 63242206 63242084 ID=Msa0654880-mRNA-1:three_prime_utr;Parent=Msa0654880-mRNA-1
chr4_3 three_prime_UTR 63241918 63241993 63241918 ID=Msa0654880-mRNA-1:three_prime_utr;Parent=Msa0654880-mRNA-1
chr4_3 three_prime_UTR 63241659 63241843 63241659 ID=Msa0654880-mRNA-1:three_prime_utr;Parent=Msa0654880-mRNA-1
chr4_3 three_prime_UTR 63241381 63241575 63241381 ID=Msa0654880-mRNA-1:three_prime_utr;Parent=Msa0654880-mRNA-1
chr4_3 three_prime_UTR 63241226 63241297 63241226 ID=Msa0654880-mRNA-1:three_prime_utr;Parent=Msa0654880-mRNA-1
chr4_3 three_prime_UTR 63240173 63240382 63240173 ID=Msa0654880-mRNA-1:three_prime_utr;Parent=Msa0654880-mRNA-1
chr4_3 three_prime_UTR 63238977 63239102 63238977 ID=Msa0654880-mRNA-1:three_prime_utr;Parent=Msa0654880-mRNA-1
chr4_3 three_prime_UTR 63237764 63237913 63237764 ID=Msa0654880-mRNA-1:three_prime_utr;Parent=Msa0654880-mRNA-1
chr4_3 three_prime_UTR 63237310 63237371 63237310 ID=Msa0654880-mRNA-1:three_prime_utr;Parent=Msa0654880-mRNA-1
chr4_3 three_prime_UTR 63237161 63237236 63237161 ID=Msa0654880-mRNA-1:three_prime_utr;Parent=Msa0654880-mRNA-1
chr4_3 three_prime_UTR 63236088 63236689 63236088 ID=Msa0654880-mRNA-1:three_prime_utr;Parent=Msa0654880-mRNA-1
Gene Sequence

>Msa0654880

ATGGCTTCGAAGCTGGCAACATGTTTTGTGTGCTGCAATTTGAGCAGCGGCTTCAACAACTGTAAGAATACCCACCGCGTAATGTGCTCTCCATTTCCATCATCTTGCAAAATGCGACACCACCGTATTCTCAGTTCTCAGCAGAAAAGACAATACCACAAGAAAACATCATCATCATCATCACAGCCATCTTCCATTGACGGAGGAGGAGGAGGAGGACCTCTTAATCCAAAATCTGATCACGATGATTCTCTACACTATTTGAACCGTCCAATTGTAGTGCCTGATACTAATAATAATTCCACACCCTCGGCCTTGAATGTAAACGGAGCAGAGCAGGCTGAACAGTTGTCTGGTGGTCAATTGGAAGATTTGTTATCCATGATAAAAAATGCAGAGAAAAACATCCTTCTTATAAATCAGGCTAGAGTTCGTGCACTTGAAGATCTTCAAAAGGTTCTTGCCGAAAAGAAAGCGCTACAAGCAGAAGTTAACGACTTAGAGATGAGGTTGGCTGAGACTGATGCGCGGATTGAAGTTGCTGACCAGGAAAAGACGCATGTTGAACTCATGGAGGGCCAGTTGGAGAAACTGCGTAATGAGTTGGCCGAAAAGGGTAGTACTGAAGAAAGCAATGCTGAATTGCATGAGCTTCATAATGATAGGATCCGTTCCCTTACTGAGGAGCTTAATTCGGTAAGAGAAGAAAATGCCTCTCTGAAGAATGCCATAGAATCATTTAAAATACAGCTCAATGATGTCAAGAACAATGATGAACGTTTGGTGGTATTGGAAAAGGAGCGCTTATTTTTGGAATCAACCCTAAAAGACCTTGAATCAAAACTGTCAATATCTCCGGAAGATGTATCTGAACTGTCCACACTTAGAGTTGAATGCAAGCATTTATCAGATAAGGTTGAAAACTTGCAATTGTTGCTAGATAAAGCAACGGAACAAGCCGACCAAGCCGTTATAGTGCTTGAAGAAAACCAGGATCTTCAAAGGAAGGTTGATAAATTGGAAACATCCCTTGAAGAAGCTAACGTCTATAAGCTATCATCTGATAAACTGCTAAAGTACAATGAACTAATGCAGCAAAAGATAAAACTATTGGAGAACAGCCTGCAAAAATCAGATGAAGATATAAACTCTTATATTCAGTTGTATCAGCAGTCAGTGAACGAATTTCAAGATACACTCGATATTCTGAAAAAAGAAAGCAAGAGAAAGACGCTGGATGAACCAGTGGAAGATATGCCGTGGGAATTCTGGAGTCAATTATTGCTTCTAATTGATGGTTGGACACTTGAAAAGAAGATAGCAGTAGATGATGCAAAGCTTTTGAGAGAAAAGGTGTGGAAAAAAGACAAGAGTATTAGTGATGTATATATGGCTTGCAAAGGAAAAAATGAAGACGAGGCTATATCTGCATTTCTTGGGCTTACATCGTCTGCAACAAGGTATTAA
Protein sequence

>Msa0654880

MASKLATCFVCCNLSSGFNNCKNTHRVMCSPFPSSCKMRHHRILSSQQKRQYHKKTSSSSSQPSSIDGGGGGGPLNPKSDHDDSLHYLNRPIVVPDTNNNSTPSALNVNGAEQAEQLSGGQLEDLLSMIKNAEKNILLINQARVRALEDLQKVLAEKKALQAEVNDLEMRLAETDARIEVADQEKTHVELMEGQLEKLRNELAEKGSTEESNAELHELHNDRIRSLTEELNSVREENASLKNAIESFKIQLNDVKNNDERLVVLEKERLFLESTLKDLESKLSISPEDVSELSTLRVECKHLSDKVENLQLLLDKATEQADQAVIVLEENQDLQRKVDKLETSLEEANVYKLSSDKLLKYNELMQQKIKLLENSLQKSDEDINSYIQLYQQSVNEFQDTLDILKKESKRKTLDEPVEDMPWEFWSQLLLLIDGWTLEKKIAVDDAKLLREKVWKKDKSISDVYMACKGKNEDEAISAFLGLTSSATRY*