AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0829430


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0829430 MtrunA17_Chr8g0390251 86.782 348 8 2 1 311 1 347 0.0 599
Msa0829430 MtrunA17_Chr6g0486631 60.714 336 92 2 13 311 16 348 7.49e-148 419
Msa0829430 MtrunA17_Chr3g0140091 57.846 325 94 3 24 311 32 350 4.21e-128 369
Msa0829430 MtrunA17_Chr2g0288571 62.898 283 64 2 70 311 5 287 3.88e-123 354
Msa0829430 MtrunA17_Chr4g0075021 59.783 276 70 2 77 311 7 282 7.11e-114 330
Msa0829430 MtrunA17_Chr4g0019621 67.241 232 70 2 80 311 23 248 1.54e-106 310
Msa0829430 MtrunA17_Chr4g0019621 46.078 102 55 0 196 297 8 109 1.10e-24 100
Msa0829430 MtrunA17_Chr4g0075001 66.827 208 65 1 108 311 58 265 2.32e-99 293
Msa0829430 MtrunA17_Chr4g0075001 49.057 106 54 0 196 301 16 121 7.08e-27 106
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0829430 AT1G67280.1 67.422 353 70 3 1 311 1 350 1.55e-169 474
Msa0829430 AT1G67280.2 76.718 262 24 1 87 311 1 262 7.11e-144 406
Msa0829430 AT1G11840.6 57.827 313 88 3 43 311 10 322 7.87e-121 350
Msa0829430 AT1G11840.4 61.348 282 68 2 71 311 2 283 1.33e-119 345
Msa0829430 AT1G11840.1 61.348 282 68 2 71 311 2 283 1.33e-119 345
Msa0829430 AT1G11840.3 61.348 282 68 2 71 311 2 283 1.33e-119 345
Msa0829430 AT1G11840.2 61.348 282 68 2 71 311 2 283 1.33e-119 345
Msa0829430 AT1G11840.5 57.919 221 56 1 71 254 2 222 2.16e-86 259
Msa0829430 AT1G11840.5 51.282 117 57 0 180 296 18 134 5.24e-35 127

Find 77 sgRNAs with CRISPR-Local

Find 307 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTTGGAGTAGAAGAGTATTT+AGG 0.260004 5_4:-2319715 Msa0829430:exon
TTGCCTGCCATTTAGGCTTT+TGG 0.265110 5_4:-2322370 Msa0829430:intron
TGTAGATTATTCAAACAAAA+TGG 0.276014 5_4:-2323983 Msa0829430:CDS
CTGGAGTTGACTTACAATTA+TGG 0.281726 5_4:-2322057 Msa0829430:CDS
TGGTTACAAATTTGAACTTT+TGG 0.294255 5_4:-2322556 Msa0829430:CDS
AAAATGAGAGAAAGAGATTC+GGG 0.301627 5_4:+2324199 None:intergenic
GGAACTGCATTTGGCCATTT+CGG 0.315598 5_4:-2322910 Msa0829430:CDS
AAGCTTTCAAGCCAAAACTA+TGG 0.324658 5_4:+2324005 None:intergenic
TATGATATTGGAACTGCATT+TGG 0.333699 5_4:-2322919 Msa0829430:CDS
GGAGTTGATAAATATGATAT+TGG 0.334496 5_4:-2322931 Msa0829430:CDS
CTATAGACATACCAATTCTT+TGG 0.335138 5_4:+2319646 None:intergenic
TTATTCAATATATTGTTTGA+TGG 0.343878 5_4:-2319470 Msa0829430:three_prime_UTR
TCTCTCAAAGTGATGTCATC+TGG 0.347644 5_4:-2323956 Msa0829430:CDS
GTTTCACAAACCCATAGTTT+TGG 0.387946 5_4:-2324016 Msa0829430:CDS
CCCACTTTACAGATTGCAAT+AGG 0.402860 5_4:-2321790 Msa0829430:intron
GGAAATAGTACCTTGTTGTC+TGG 0.415086 5_4:+2322319 None:intergenic
GGAGTCACTGAATATGATAA+AGG 0.416787 5_4:-2322036 Msa0829430:CDS
ATCAGAAAATGTACTGGAAT+GGG 0.426693 5_4:-2323903 Msa0829430:CDS
TTGCCTCCTTTGACAGGACC+AGG 0.434438 5_4:+2322609 None:intergenic
ACCATAGCAATGCTTGGTTA+TGG 0.437587 5_4:-2322102 Msa0829430:CDS
TATCCACGGGAAAGCTTACT+CGG 0.440866 5_4:-2321729 Msa0829430:CDS
CGTGGATAGTTTAATCGCTT+CGG 0.444321 5_4:+2321744 None:intergenic
CGGGAACCTGGACCATTGCC+TGG 0.446245 5_4:-2321709 Msa0829430:CDS
TCAAACGTCTGCCAAAGAAT+TGG 0.446519 5_4:-2319657 Msa0829430:three_prime_UTR
AGTTCAAATTTGTAACCATC+AGG 0.449931 5_4:+2322561 None:intergenic
GGAAAGCTTACTCGGGAACC+TGG 0.467387 5_4:-2321721 Msa0829430:CDS
TGTTTATCGTGTTGGTGACT+TGG 0.472187 5_4:-2323849 Msa0829430:CDS
CTCTCAAAGTGATGTCATCT+GGG 0.476068 5_4:-2323955 Msa0829430:CDS
GCGATTGAAGAGAGAAAGAG+TGG 0.478044 5_4:+2324226 None:intergenic
ATCACTTGGCACAATGGCTC+GGG 0.479897 5_4:+2322519 None:intergenic
CTTCATGTTGTTTATCGTGT+TGG 0.480854 5_4:-2323857 Msa0829430:CDS
CATCAGAAAATGTACTGGAA+TGG 0.481686 5_4:-2323904 Msa0829430:CDS
TCTTCCATCCATCAGGATCC+AGG 0.482454 5_4:+2321662 None:intergenic
AGAAGATAAAACGACTGTTC+TGG 0.483579 5_4:-2322076 Msa0829430:CDS
CATCAACAGCAATACCGAAA+TGG 0.487202 5_4:+2322896 None:intergenic
TTGGCACAATGGCTCGGGAG+TGG 0.498981 5_4:+2322524 None:intergenic
AGCTTTCAAGCCAAAACTAT+GGG 0.500650 5_4:+2324006 None:intergenic
CATCACTTGGCACAATGGCT+CGG 0.503234 5_4:+2322518 None:intergenic
TGGCACAATGGCTCGGGAGT+GGG 0.512754 5_4:+2322525 None:intergenic
TTGATACCAGGCAATGGTCC+AGG 0.512839 5_4:+2321703 None:intergenic
GTGGAACTAATAAGAGCTAA+AGG 0.527668 5_4:-2322651 Msa0829430:CDS
CACCCACTCGAAGCATCACT+TGG 0.531180 5_4:+2322505 None:intergenic
TCTCATAAAATTCAATTGAA+CGG 0.539116 5_4:+2322475 None:intergenic
GAGTAGAAGAGTATTTAGGT+AGG 0.545659 5_4:-2319711 Msa0829430:exon
TAAAGGAAATGCTTATGCTC+AGG 0.546983 5_4:-2322019 Msa0829430:intron
AAGTGTGAGTGAGTGAGTGA+AGG 0.552166 5_4:+2324313 None:intergenic
TGCTTCATCAGAAAATGTAC+TGG 0.554972 5_4:-2323909 Msa0829430:CDS
CATACCGTCTTCCATCCATC+AGG 0.567411 5_4:+2321655 None:intergenic
TGAGGAGCACAAGAAAAGAA+AGG 0.570210 5_4:+2324362 None:intergenic
AGAGAGCCTGGTCCTGTCAA+AGG 0.574783 5_4:-2322615 Msa0829430:CDS
CGAAGCATCACTTGGCACAA+TGG 0.575077 5_4:+2322513 None:intergenic
CTCTCACCATAGCTTTGAGT+CGG 0.577829 5_4:+2324279 None:intergenic
GTATGGAGCTGCTTCGTACG+CGG 0.578040 5_4:-2322348 Msa0829430:CDS
CATGCCTGGATCCTGATGGA+TGG 0.578165 5_4:-2321666 Msa0829430:CDS
CAGTATACCATAGCAATGCT+TGG 0.579257 5_4:-2322108 Msa0829430:CDS
ACCATAACCAAGCATTGCTA+TGG 0.580026 5_4:+2322101 None:intergenic
ACAAATGCTAGAACAGCGTA+GGG 0.590643 5_4:-2319550 Msa0829430:three_prime_UTR
TTCCCGAGTAAGCTTTCCCG+TGG 0.591304 5_4:+2321726 None:intergenic
TCATCACCGACTCAAAGCTA+TGG 0.597816 5_4:-2324285 Msa0829430:exon
AACAAATGCTAGAACAGCGT+AGG 0.602642 5_4:-2319551 Msa0829430:three_prime_UTR
GCATTTGTTGAAGATCCTGA+TGG 0.602821 5_4:-2322576 Msa0829430:CDS
ACTGCATGCCTGGATCCTGA+TGG 0.602947 5_4:-2321670 Msa0829430:CDS
TTTGTGTTGATACCAGGCAA+TGG 0.616817 5_4:+2321697 None:intergenic
GAAGCGATTAAACTATCCAC+GGG 0.618591 5_4:-2321742 Msa0829430:CDS
AGTGAGTGAAGGAAGTGTTG+TGG 0.622693 5_4:+2324324 None:intergenic
TATGGAGCTGCTTCGTACGC+GGG 0.624392 5_4:-2322347 Msa0829430:CDS
CGAAGCGATTAAACTATCCA+CGG 0.624980 5_4:-2321743 Msa0829430:CDS
GGATCCTGATGGATGGAAGA+CGG 0.635393 5_4:-2321659 Msa0829430:intron
GTGCCAAGTGATGCTTCGAG+TGG 0.647147 5_4:-2322508 Msa0829430:CDS
GAGCCTGGTCCTGTCAAAGG+AGG 0.647264 5_4:-2322612 Msa0829430:CDS
ATCCACGGGAAAGCTTACTC+GGG 0.647863 5_4:-2321728 Msa0829430:CDS
GAACTAATAAGAGCTAAAGG+TGG 0.648075 5_4:-2322648 Msa0829430:CDS
TGGATGATGAACTATGTATG+AGG 0.653626 5_4:+2324344 None:intergenic
CGATTGAAGAGAGAAAGAGT+GGG 0.656392 5_4:+2324227 None:intergenic
TGCCAAGTGATGCTTCGAGT+GGG 0.680292 5_4:-2322507 Msa0829430:CDS
GCGGGATAATCCAGACAACA+AGG 0.682899 5_4:-2322329 Msa0829430:intron
AAATGAGAGAAAGAGATTCG+GGG 0.711378 5_4:+2324200 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATAAAAAAAAAAATTAGTTC+AGG + chr5_4:2319747-2319766 None:intergenic 10.0%
!!! TCATATTCAATTTATTATTT+TGG - chr5_4:2320024-2320043 Msa0829430:intron 10.0%
!! TCTTTATTATTTATCAAAAT+AGG + chr5_4:2320316-2320335 None:intergenic 10.0%
!!! TTTTTGTATATAAAAGAATA+AGG - chr5_4:2322351-2322370 Msa0829430:CDS 10.0%
!! AAGTAATATTATGTATAAAT+AGG + chr5_4:2323300-2323319 None:intergenic 10.0%
!!! CTTTTACTTCATATTTTATT+TGG - chr5_4:2322870-2322889 Msa0829430:intron 15.0%
!!! TTTACTTTGAAATCTTATTT+TGG - chr5_4:2323467-2323486 Msa0829430:intron 15.0%
!!! AGATAATATTGATTTTCTAA+AGG - chr5_4:2324080-2324099 Msa0829430:intron 15.0%
!! TTATTCAATATATTGTTTGA+TGG - chr5_4:2324349-2324368 Msa0829430:five_prime_UTR 15.0%
!! TGTAGATTATTCAAACAAAA+TGG - chr5_4:2319836-2319855 Msa0829430:intron 20.0%
!! TAAGCATTTCTATAGAAATA+AGG - chr5_4:2320249-2320268 Msa0829430:intron 20.0%
!! ACTTAATTGTTTACTCAAAT+AGG + chr5_4:2320276-2320295 None:intergenic 20.0%
!!! CTTATTTTCATAAACTCTTT+AGG + chr5_4:2320393-2320412 None:intergenic 20.0%
!! TGAAGAACTATAAACTTAAT+TGG - chr5_4:2320683-2320702 Msa0829430:intron 20.0%
!! CATTTAACAATATCAGATTA+CGG - chr5_4:2320867-2320886 Msa0829430:intron 20.0%
!!! TTCTGTTTTTGTCATTATTT+AGG - chr5_4:2321065-2321084 Msa0829430:intron 20.0%
!! TTATTAGATTACAAAAACAG+TGG - chr5_4:2321149-2321168 Msa0829430:intron 20.0%
!! TCTCATAAAATTCAATTGAA+CGG + chr5_4:2321347-2321366 None:intergenic 20.0%
!!! TTCAATTGAATTTTATGAGA+AGG - chr5_4:2321347-2321366 Msa0829430:intron 20.0%
!! AAAACATTAAATCAATTACG+TGG - chr5_4:2321426-2321445 Msa0829430:intron 20.0%
!! ATAAAAGAATAAGGATAACA+AGG - chr5_4:2322360-2322379 Msa0829430:intron 20.0%
!! TAAAATATGAAGTAAAAGCA+AGG + chr5_4:2322868-2322887 None:intergenic 20.0%
!!! CCAATTTATGGATTTTAAAA+AGG + chr5_4:2323606-2323625 None:intergenic 20.0%
!!! CCTTTTTAAAATCCATAAAT+TGG - chr5_4:2323603-2323622 Msa0829430:intron 20.0%
!!! CACTAGTTAAAAAATTTGTT+CGG - chr5_4:2323651-2323670 Msa0829430:intron 20.0%
!!! ATCCATTTTAGACAAATTTA+AGG - chr5_4:2323886-2323905 Msa0829430:CDS 20.0%
!! AACCTTAAATTTGTCTAAAA+TGG + chr5_4:2323891-2323910 None:intergenic 20.0%
!!! ATTTTCTACAAAATCGAATT+TGG + chr5_4:2324219-2324238 None:intergenic 20.0%
!! TACAATGCTTATAAAAAAAG+TGG - chr5_4:2324305-2324324 Msa0829430:five_prime_UTR 20.0%
! AAAAATGAGAGAAAGAGATT+CGG + chr5_4:2319624-2319643 None:intergenic 25.0%
! ATAACAAAATGTGAATCTTC+AGG + chr5_4:2320198-2320217 None:intergenic 25.0%
! TAAACTTAATTGGATTGAGA+AGG - chr5_4:2320693-2320712 Msa0829430:intron 25.0%
! ACTAATTCTAACATCTTAAG+AGG + chr5_4:2320776-2320795 None:intergenic 25.0%
! GAATTTAGACTTTATGAAGT+AGG - chr5_4:2320798-2320817 Msa0829430:intron 25.0%
!!! GGAGTTGATAAATATGATAT+TGG - chr5_4:2320888-2320907 Msa0829430:intron 25.0%
! ATACTAGTGATACTAAAGTT+TGG + chr5_4:2320960-2320979 None:intergenic 25.0%
!!! ATTTAGGATTTTCTTTCCAT+TGG - chr5_4:2321081-2321100 Msa0829430:intron 25.0%
!! TGGTTACAAATTTGAACTTT+TGG - chr5_4:2321263-2321282 Msa0829430:intron 25.0%
!!! AAATTTGAACTTTTGGAAAG+AGG - chr5_4:2321270-2321289 Msa0829430:intron 25.0%
! GAAAAATACATAAAGTAGGT+GGG + chr5_4:2321524-2321543 None:intergenic 25.0%
! TGAAAAATACATAAAGTAGG+TGG + chr5_4:2321525-2321544 None:intergenic 25.0%
! CAGTGAAAAATACATAAAGT+AGG + chr5_4:2321528-2321547 None:intergenic 25.0%
!!! GTATACCTGTTTTGAAATAT+TGG - chr5_4:2321580-2321599 Msa0829430:intron 25.0%
!! AAATATCTTTTGCAAGTCTT+AGG - chr5_4:2321609-2321628 Msa0829430:intron 25.0%
! AACTACGGAAATAAATATTC+GGG + chr5_4:2321960-2321979 None:intergenic 25.0%
! GAACTACGGAAATAAATATT+CGG + chr5_4:2321961-2321980 None:intergenic 25.0%
! TACAAAAACTTTCAACATAC+AGG + chr5_4:2322339-2322358 None:intergenic 25.0%
! ATATGGTATCAGAAACTTTA+TGG + chr5_4:2322407-2322426 None:intergenic 25.0%
! AAAGCATATAAGGACAAAAT+CGG + chr5_4:2322731-2322750 None:intergenic 25.0%
!! TTTTGTCCTTATATGCTTTT+CGG - chr5_4:2322732-2322751 Msa0829430:intron 25.0%
! AAGAAAACACATAGATGAAA+GGG + chr5_4:2322980-2322999 None:intergenic 25.0%
! AAAGAAAACACATAGATGAA+AGG + chr5_4:2322981-2323000 None:intergenic 25.0%
! TAGTTGTATTTGTATATGAC+AGG + chr5_4:2323240-2323259 None:intergenic 25.0%
! GGAAACATGAAAATAGATTA+AGG + chr5_4:2323279-2323298 None:intergenic 25.0%
! AAAATCCAATGCTAAAATGA+AGG - chr5_4:2323425-2323444 Msa0829430:intron 25.0%
!!! TTTAACCTTCATTTTAGCAT+TGG + chr5_4:2323433-2323452 None:intergenic 25.0%
!!! AATCTTATTTTGGTACCTTA+TGG - chr5_4:2323477-2323496 Msa0829430:intron 25.0%
! TGATTATTGTGAATACCATA+AGG + chr5_4:2323495-2323514 None:intergenic 25.0%
! AACGTAGTAATATTTAGAGA+TGG - chr5_4:2323521-2323540 Msa0829430:intron 25.0%
!!! TTTTAAAAAGGAAGCGATAA+TGG + chr5_4:2323594-2323613 None:intergenic 25.0%
! AACACTCAAAATCCAATTTA+TGG + chr5_4:2323618-2323637 None:intergenic 25.0%
!! TTGTCTAAAATGGATCAATA+TGG + chr5_4:2323881-2323900 None:intergenic 25.0%
! TAGTACTTCTATTTGTCAAT+TGG - chr5_4:2323964-2323983 Msa0829430:CDS 25.0%
! AAAATGAACAAACAACAGAA+GGG + chr5_4:2324000-2324019 None:intergenic 25.0%
! AAAAATGAACAAACAACAGA+AGG + chr5_4:2324001-2324020 None:intergenic 25.0%
!!! TATTGATTTTCTAAAGGAGT+TGG - chr5_4:2324086-2324105 Msa0829430:intron 25.0%
AGAATTGAAAAACTAGCGAT+GGG + chr5_4:2319571-2319590 None:intergenic 30.0%
TAGAATTGAAAAACTAGCGA+TGG + chr5_4:2319572-2319591 None:intergenic 30.0%
AAAATGAGAGAAAGAGATTC+GGG + chr5_4:2319623-2319642 None:intergenic 30.0%
TCATCATGAGAAGTAAAGAA+AGG + chr5_4:2319694-2319713 None:intergenic 30.0%
ATCAGAAAATGTACTGGAAT+GGG - chr5_4:2319916-2319935 Msa0829430:intron 30.0%
! AGATATACCAATGCTTTTCT+TGG - chr5_4:2320165-2320184 Msa0829430:intron 30.0%
TATTGAACTCACATACAGTA+AGG - chr5_4:2320215-2320234 Msa0829430:intron 30.0%
TCAAATAAGTCAATCCAAAC+AGG - chr5_4:2320498-2320517 Msa0829430:intron 30.0%
TTTAGCATTTAGTACCTGTT+TGG + chr5_4:2320515-2320534 None:intergenic 30.0%
TCAAAGTTATATACCAAACC+TGG + chr5_4:2320538-2320557 None:intergenic 30.0%
TATGATATTGGAACTGCATT+TGG - chr5_4:2320900-2320919 Msa0829430:intron 30.0%
AGTTCAAATTTGTAACCATC+AGG + chr5_4:2321261-2321280 None:intergenic 30.0%
! TTGAATTTTATGAGAAGGTG+AGG - chr5_4:2321352-2321371 Msa0829430:intron 30.0%
CAAAAGAACACAAAAGCAAA+AGG + chr5_4:2321558-2321577 None:intergenic 30.0%
GTGTACCAATATTTCAAAAC+AGG + chr5_4:2321588-2321607 None:intergenic 30.0%
AAAAGCCATAACATGAAAGA+AGG + chr5_4:2321686-2321705 None:intergenic 30.0%
ACTACGGAAATAAATATTCG+GGG + chr5_4:2321959-2321978 None:intergenic 30.0%
AAGAAACCATCTTCAAATAG+AGG + chr5_4:2321988-2322007 None:intergenic 30.0%
!! GTAATTTTTGTGTTGATACC+AGG + chr5_4:2322131-2322150 None:intergenic 30.0%
ATTCACTCAAACGTTTAACA+TGG - chr5_4:2322223-2322242 Msa0829430:intron 30.0%
GGATCAAACTGTTAACTATT+TGG - chr5_4:2322381-2322400 Msa0829430:intron 30.0%
!! GATTAGGAGTGTCTTTAATA+TGG + chr5_4:2322424-2322443 None:intergenic 30.0%
!!! TTAGCTTTTGAGGTTGATTT+AGG - chr5_4:2322477-2322496 Msa0829430:CDS 30.0%
GATCTTAGAATTTGGACTTT+AGG + chr5_4:2322503-2322522 None:intergenic 30.0%
TCAGATACGATCTTAGAATT+TGG + chr5_4:2322511-2322530 None:intergenic 30.0%
TACATATAGTCGTTTAGTGT+GGG - chr5_4:2322663-2322682 Msa0829430:CDS 30.0%
AAATCGGTATTCCACAAAAT+GGG + chr5_4:2322715-2322734 None:intergenic 30.0%
AAAATCGGTATTCCACAAAA+TGG + chr5_4:2322716-2322735 None:intergenic 30.0%
!! GAGTCACTTTAAAGTAATGA+TGG + chr5_4:2322830-2322849 None:intergenic 30.0%
GAAATGATAAAGAAAGAGAC+TGG + chr5_4:2323216-2323235 None:intergenic 30.0%
TAACAAGACCAATATGGATA+CGG + chr5_4:2323559-2323578 None:intergenic 30.0%
TGTATGTAACAAGACCAATA+TGG + chr5_4:2323565-2323584 None:intergenic 30.0%
!!! AATTTTTTAACTAGTGCGCT+TGG + chr5_4:2323647-2323666 None:intergenic 30.0%
TGGCGACTTGTAAAAAAATT+GGG + chr5_4:2323691-2323710 None:intergenic 30.0%
ATGGCGACTTGTAAAAAAAT+TGG + chr5_4:2323692-2323711 None:intergenic 30.0%
CGTACAAAACAAACGAATAA+TGG + chr5_4:2323711-2323730 None:intergenic 30.0%
! TTTTCCAATCTCAAATGTTC+AGG - chr5_4:2324050-2324069 Msa0829430:intron 30.0%
! AAAACCTGAACATTTGAGAT+TGG + chr5_4:2324057-2324076 None:intergenic 30.0%
CTATAGACATACCAATTCTT+TGG + chr5_4:2324176-2324195 None:intergenic 30.0%
TGGATGATGAACTATGTATG+AGG + chr5_4:2319478-2319497 None:intergenic 35.0%
AAATGAGAGAAAGAGATTCG+GGG + chr5_4:2319622-2319641 None:intergenic 35.0%
!! TCTTTCTCTCATTTTTCCAC+CGG - chr5_4:2319628-2319647 Msa0829430:three_prime_UTR 35.0%
! TGAATAAGTTGAGAGAGAGA+GGG + chr5_4:2319662-2319681 None:intergenic 35.0%
! ATGAATAAGTTGAGAGAGAG+AGG + chr5_4:2319663-2319682 None:intergenic 35.0%
! GTTTCACAAACCCATAGTTT+TGG - chr5_4:2319803-2319822 Msa0829430:intron 35.0%
AGCTTTCAAGCCAAAACTAT+GGG + chr5_4:2319816-2319835 None:intergenic 35.0%
AAGCTTTCAAGCCAAAACTA+TGG + chr5_4:2319817-2319836 None:intergenic 35.0%
TGCTTCATCAGAAAATGTAC+TGG - chr5_4:2319910-2319929 Msa0829430:intron 35.0%
CATCAGAAAATGTACTGGAA+TGG - chr5_4:2319915-2319934 Msa0829430:intron 35.0%
! CTTCATGTTGTTTATCGTGT+TGG - chr5_4:2319962-2319981 Msa0829430:intron 35.0%
! AGATTTTATACCGAGTGTCT+GGG - chr5_4:2320105-2320124 Msa0829430:intron 35.0%
! GCATTGGTATATCTTTCTTC+CGG + chr5_4:2320159-2320178 None:intergenic 35.0%
! ACCAATGCTTTTCTTGGATA+TGG - chr5_4:2320171-2320190 Msa0829430:intron 35.0%
! TCCATATCCAAGAAAAGCAT+TGG + chr5_4:2320175-2320194 None:intergenic 35.0%
AACATAAGCACTTGTGAGAA+TGG + chr5_4:2320467-2320486 None:intergenic 35.0%
ACTAAATGCTAAACCAGGTT+TGG - chr5_4:2320522-2320541 Msa0829430:intron 35.0%
TCAAAACCCATAGGTCAATT+TGG + chr5_4:2320740-2320759 None:intergenic 35.0%
TCAACATAGTCAAAACCCAT+AGG + chr5_4:2320749-2320768 None:intergenic 35.0%
GTGGAACTAATAAGAGCTAA+AGG - chr5_4:2321168-2321187 Msa0829430:intron 35.0%
GAACTAATAAGAGCTAAAGG+TGG - chr5_4:2321171-2321190 Msa0829430:intron 35.0%
! TCTTTTGCCTTTTGACACTT+TGG - chr5_4:2321645-2321664 Msa0829430:intron 35.0%
!! AGAACAGTCGTTTTATCTTC+TGG + chr5_4:2321744-2321763 None:intergenic 35.0%
AGAAGATAAAACGACTGTTC+TGG - chr5_4:2321743-2321762 Msa0829430:CDS 35.0%
! CTGGAGTTGACTTACAATTA+TGG - chr5_4:2321762-2321781 Msa0829430:CDS 35.0%
GGAGTCACTGAATATGATAA+AGG - chr5_4:2321783-2321802 Msa0829430:intron 35.0%
TAAAGGAAATGCTTATGCTC+AGG - chr5_4:2321800-2321819 Msa0829430:intron 35.0%
TTCGATTGAATCTTGTGAAG+AGG - chr5_4:2321842-2321861 Msa0829430:intron 35.0%
CTATTGCAATCTGTAAAGTG+GGG + chr5_4:2322031-2322050 None:intergenic 35.0%
CCTATTGCAATCTGTAAAGT+GGG + chr5_4:2322032-2322051 None:intergenic 35.0%
ACCTATTGCAATCTGTAAAG+TGG + chr5_4:2322033-2322052 None:intergenic 35.0%
ACTCAAACGTTTAACATGGA+AGG - chr5_4:2322227-2322246 Msa0829430:intron 35.0%
CTCAAACGTTTAACATGGAA+GGG - chr5_4:2322228-2322247 Msa0829430:intron 35.0%
TCAAACGTTTAACATGGAAG+GGG - chr5_4:2322229-2322248 Msa0829430:intron 35.0%
AAAAGCTAACTCAAAAGACG+AGG + chr5_4:2322466-2322485 None:intergenic 35.0%
!!! GTCTTTTGAGTTAGCTTTTG+AGG - chr5_4:2322467-2322486 Msa0829430:intron 35.0%
AACGACTATATGTACCTAGA+AGG + chr5_4:2322657-2322676 None:intergenic 35.0%
GTACATATAGTCGTTTAGTG+TGG - chr5_4:2322662-2322681 Msa0829430:CDS 35.0%
GGTATGCTTCTAGACTTAAT+TGG + chr5_4:2322694-2322713 None:intergenic 35.0%
! TAATGATGGAGAGACAGTTT+AGG + chr5_4:2322816-2322835 None:intergenic 35.0%
! GAGGAGTTGTCTGATTTTAA+TGG + chr5_4:2322918-2322937 None:intergenic 35.0%
TTAAAACAAGTCTCGCTCTT+GGG + chr5_4:2322949-2322968 None:intergenic 35.0%
ATTAAAACAAGTCTCGCTCT+TGG + chr5_4:2322950-2322969 None:intergenic 35.0%
GGGAATTGATATCAATGAAG+AGG + chr5_4:2323046-2323065 None:intergenic 35.0%
TCCCTAACTGTTTAAGTAAC+TGG - chr5_4:2323334-2323353 Msa0829430:intron 35.0%
GCCAGTTACTTAAACAGTTA+GGG + chr5_4:2323338-2323357 None:intergenic 35.0%
TGCGATAGTGTCAGTATAAA+GGG + chr5_4:2323380-2323399 None:intergenic 35.0%
TTGCGATAGTGTCAGTATAA+AGG + chr5_4:2323381-2323400 None:intergenic 35.0%
ACACACCAAAGTAAACAGAA+GGG + chr5_4:2323755-2323774 None:intergenic 35.0%
GTGTGTGTTCTTATGTAAGA+TGG + chr5_4:2323783-2323802 None:intergenic 35.0%
!! GTTGGAGTAGAAGAGTATTT+AGG - chr5_4:2324104-2324123 Msa0829430:intron 35.0%
!! GAGTAGAAGAGTATTTAGGT+AGG - chr5_4:2324108-2324127 Msa0829430:intron 35.0%
CGATTGAAGAGAGAAAGAGT+GGG + chr5_4:2319595-2319614 None:intergenic 40.0%
TCTCTCAAAGTGATGTCATC+TGG - chr5_4:2319863-2319882 Msa0829430:intron 40.0%
CTCTCAAAGTGATGTCATCT+GGG - chr5_4:2319864-2319883 Msa0829430:intron 40.0%
!! TGTTTATCGTGTTGGTGACT+TGG - chr5_4:2319970-2319989 Msa0829430:intron 40.0%
! CAGATTTTATACCGAGTGTC+TGG - chr5_4:2320104-2320123 Msa0829430:intron 40.0%
CAGGTACTAAATGCTAAACC+AGG - chr5_4:2320517-2320536 Msa0829430:intron 40.0%
AGCCAATCCAAATTGACCTA+TGG - chr5_4:2320730-2320749 Msa0829430:intron 40.0%
GCCAATCCAAATTGACCTAT+GGG - chr5_4:2320731-2320750 Msa0829430:intron 40.0%
ACCCATAGGTCAATTTGGAT+TGG + chr5_4:2320735-2320754 None:intergenic 40.0%
CATCAACAGCAATACCGAAA+TGG + chr5_4:2320926-2320945 None:intergenic 40.0%
TGTGTTCATTCCTGTTGAGT+TGG - chr5_4:2321008-2321027 Msa0829430:intron 40.0%
CATGTTTGTCAAAAGGCCAA+TGG + chr5_4:2321100-2321119 None:intergenic 40.0%
!!! CATTGGCCTTTTGACAAACA+TGG - chr5_4:2321098-2321117 Msa0829430:intron 40.0%
CAGCATCCATGTTTGTCAAA+AGG + chr5_4:2321107-2321126 None:intergenic 40.0%
! CTTTTGACAAACATGGATGC+TGG - chr5_4:2321105-2321124 Msa0829430:intron 40.0%
GGAAAAATAACTAGAGAGCC+TGG - chr5_4:2321192-2321211 Msa0829430:intron 40.0%
! GCATTTGTTGAAGATCCTGA+TGG - chr5_4:2321243-2321262 Msa0829430:intron 40.0%
ATACCAAAAGCCTAAATGGC+AGG + chr5_4:2321455-2321474 None:intergenic 40.0%
!! TGCCATTTAGGCTTTTGGTA+TGG - chr5_4:2321454-2321473 Msa0829430:intron 40.0%
CTCCATACCAAAAGCCTAAA+TGG + chr5_4:2321459-2321478 None:intergenic 40.0%
! GGAAATAGTACCTTGTTGTC+TGG + chr5_4:2321503-2321522 None:intergenic 40.0%
ACATGAAAGAAGGTAGGCAA+AGG + chr5_4:2321676-2321695 None:intergenic 40.0%
GCCTACCTTCTTTCATGTTA+TGG - chr5_4:2321678-2321697 Msa0829430:CDS 40.0%
GCCATAACATGAAAGAAGGT+AGG + chr5_4:2321682-2321701 None:intergenic 40.0%
CAGTATACCATAGCAATGCT+TGG - chr5_4:2321711-2321730 Msa0829430:CDS 40.0%
ACCATAGCAATGCTTGGTTA+TGG - chr5_4:2321717-2321736 Msa0829430:CDS 40.0%
! ACCATAACCAAGCATTGCTA+TGG + chr5_4:2321721-2321740 None:intergenic 40.0%
! TGAAGAGGTTTTCATTGCTG+TGG - chr5_4:2321857-2321876 Msa0829430:intron 40.0%
CAAATAGAGGCAAGGAACTA+CGG + chr5_4:2321975-2321994 None:intergenic 40.0%
TCCTTGCCTCTATTTGAAGA+TGG - chr5_4:2321979-2321998 Msa0829430:intron 40.0%
ACCATCTTCAAATAGAGGCA+AGG + chr5_4:2321983-2322002 None:intergenic 40.0%
CCCACTTTACAGATTGCAAT+AGG - chr5_4:2322029-2322048 Msa0829430:CDS 40.0%
CGTGGATAGTTTAATCGCTT+CGG + chr5_4:2322078-2322097 None:intergenic 40.0%
CGAAGCGATTAAACTATCCA+CGG - chr5_4:2322076-2322095 Msa0829430:CDS 40.0%
GAAGCGATTAAACTATCCAC+GGG - chr5_4:2322077-2322096 Msa0829430:CDS 40.0%
! TTTGTGTTGATACCAGGCAA+TGG + chr5_4:2322125-2322144 None:intergenic 40.0%
CACAAAAATTACTGCATGCC+TGG - chr5_4:2322139-2322158 Msa0829430:intron 40.0%
AGACACTCCTAATCCTTGTT+AGG - chr5_4:2322430-2322449 Msa0829430:intron 40.0%
TCCATTCTAGATCTGCTCTT+AGG - chr5_4:2322532-2322551 Msa0829430:CDS 40.0%
CTTGGAGCATGGACAAATAA+GGG + chr5_4:2322561-2322580 None:intergenic 40.0%
ACTTGGAGCATGGACAAATA+AGG + chr5_4:2322562-2322581 None:intergenic 40.0%
!! CTAGAAGCATACCCATTTTG+TGG - chr5_4:2322701-2322720 Msa0829430:intron 40.0%
! GAGTAGCCGAAAAGCATATA+AGG + chr5_4:2322741-2322760 None:intergenic 40.0%
TAGAATGAAGTGGAGCTTAC+AGG + chr5_4:2322786-2322805 None:intergenic 40.0%
AGGAGAGAACTAGAATGAAG+TGG + chr5_4:2322796-2322815 None:intergenic 40.0%
ATGGAAGACACATGTTGAGT+TGG + chr5_4:2322899-2322918 None:intergenic 40.0%
! GGAGACAGAAGCACATAATT+GGG + chr5_4:2323025-2323044 None:intergenic 40.0%
! AGGAGACAGAAGCACATAAT+TGG + chr5_4:2323026-2323045 None:intergenic 40.0%
CATGAGTTGTTGAAGAGTCA+GGG + chr5_4:2323066-2323085 None:intergenic 40.0%
CAAGTTTGACCTCAGAATAG+CGG - chr5_4:2323160-2323179 Msa0829430:intron 40.0%
GGGGAATAATTTCCTTCGTT+GGG + chr5_4:2323188-2323207 None:intergenic 40.0%
AGGGGAATAATTTCCTTCGT+TGG + chr5_4:2323189-2323208 None:intergenic 40.0%
AAAGAAAGAGACTGGTGACA+GGG + chr5_4:2323208-2323227 None:intergenic 40.0%
TAAAGAAAGAGACTGGTGAC+AGG + chr5_4:2323209-2323228 None:intergenic 40.0%
GGCCAGTTACTTAAACAGTT+AGG + chr5_4:2323339-2323358 None:intergenic 40.0%
CCAATATGGATACGGTGATA+TGG + chr5_4:2323551-2323570 None:intergenic 40.0%
CCATATCACCGTATCCATAT+TGG - chr5_4:2323548-2323567 Msa0829430:intron 40.0%
CACACACCAAAGTAAACAGA+AGG + chr5_4:2323756-2323775 None:intergenic 40.0%
TCAAACGTCTGCCAAAGAAT+TGG - chr5_4:2324162-2324181 Msa0829430:intron 40.0%
AACAAATGCTAGAACAGCGT+AGG - chr5_4:2324268-2324287 Msa0829430:CDS 40.0%
ACAAATGCTAGAACAGCGTA+GGG - chr5_4:2324269-2324288 Msa0829430:CDS 40.0%
!! AGTGAGTGAAGGAAGTGTTG+TGG + chr5_4:2319498-2319517 None:intergenic 45.0%
AAGTGTGAGTGAGTGAGTGA+AGG + chr5_4:2319509-2319528 None:intergenic 45.0%
!! TCATCACCGACTCAAAGCTA+TGG - chr5_4:2319534-2319553 Msa0829430:three_prime_UTR 45.0%
!! CTCTCACCATAGCTTTGAGT+CGG + chr5_4:2319543-2319562 None:intergenic 45.0%
GCGATTGAAGAGAGAAAGAG+TGG + chr5_4:2319596-2319615 None:intergenic 45.0%
GAGAGAGAGGGAGAAATTAC+CGG + chr5_4:2319650-2319669 None:intergenic 45.0%
GGAACTGCATTTGGCCATTT+CGG - chr5_4:2320909-2320928 Msa0829430:intron 45.0%
AGGAATGAACACAGCATGAG+AGG + chr5_4:2321001-2321020 None:intergenic 45.0%
!! GTTCATTCCTGTTGAGTTGG+TGG - chr5_4:2321011-2321030 Msa0829430:intron 45.0%
CCATGTGAGATTGAGGATCA+AGG + chr5_4:2321037-2321056 None:intergenic 45.0%
CCTTGATCCTCAATCTCACA+TGG - chr5_4:2321034-2321053 Msa0829430:intron 45.0%
ATCCTCAATCTCACATGGTG+TGG - chr5_4:2321039-2321058 Msa0829430:intron 45.0%
! ACTGTTTTGCCTCCTTTGAC+AGG + chr5_4:2321219-2321238 None:intergenic 45.0%
AGCATGAGCTGACACAGAAT+AGG + chr5_4:2321384-2321403 None:intergenic 45.0%
!! TTGCCTGCCATTTAGGCTTT+TGG - chr5_4:2321449-2321468 Msa0829430:intron 45.0%
! GGACATGCCAAAGTGTCAAA+AGG + chr5_4:2321655-2321674 None:intergenic 45.0%
TATCCACGGGAAAGCTTACT+CGG - chr5_4:2322090-2322109 Msa0829430:CDS 45.0%
ACGTTTAACATGGAAGGGGA+AGG - chr5_4:2322233-2322252 Msa0829430:intron 45.0%
CTTGCATGTGGTGATCTGTT+AGG + chr5_4:2322277-2322296 None:intergenic 45.0%
AACAGATCACCACATGCAAG+AGG - chr5_4:2322277-2322296 Msa0829430:intron 45.0%
GCTCAAGCCTAACAAGGATT+AGG + chr5_4:2322440-2322459 None:intergenic 45.0%
GCCTAAGAGCAGATCTAGAA+TGG + chr5_4:2322536-2322555 None:intergenic 45.0%
ATTTGTCCATGCTCCAAGTG+TGG - chr5_4:2322563-2322582 Msa0829430:CDS 45.0%
TTTGTCCATGCTCCAAGTGT+GGG - chr5_4:2322564-2322583 Msa0829430:CDS 45.0%
TGCCAAGCTGCTTGCTTAAA+GGG + chr5_4:2322594-2322613 None:intergenic 45.0%
ATGCCAAGCTGCTTGCTTAA+AGG + chr5_4:2322595-2322614 None:intergenic 45.0%
!! TAACCTGACGAGTCTTGTTG+AGG - chr5_4:2322618-2322637 Msa0829430:CDS 45.0%
GAACTCTATACGAGCCTTCT+AGG - chr5_4:2322640-2322659 Msa0829430:CDS 45.0%
ATAGTCGTTTAGTGTGGGCT+TGG - chr5_4:2322668-2322687 Msa0829430:intron 45.0%
! ATGCTTTTCGGCTACTCCAT+TGG - chr5_4:2322744-2322763 Msa0829430:intron 45.0%
TTAAAGTGACTCCTCCTCTC+AGG - chr5_4:2322838-2322857 Msa0829430:intron 45.0%
AAAAGCAAGGACAACCTGAG+AGG + chr5_4:2322855-2322874 None:intergenic 45.0%
GCATGAGTTGTTGAAGAGTC+AGG + chr5_4:2323067-2323086 None:intergenic 45.0%
! GAGATCATGAAGCAGGTTGA+TGG + chr5_4:2323115-2323134 None:intergenic 45.0%
TCAACCTGCTTCATGATCTC+AGG - chr5_4:2323115-2323134 Msa0829430:intron 45.0%
CAACCTGCTTCATGATCTCA+GGG - chr5_4:2323116-2323135 Msa0829430:intron 45.0%
TTACCCTGAGATCATGAAGC+AGG + chr5_4:2323122-2323141 None:intergenic 45.0%
AAGAAAGAGACTGGTGACAG+GGG + chr5_4:2323207-2323226 None:intergenic 45.0%
CACCAAAGTAAACAGAAGGG+AGG + chr5_4:2323752-2323771 None:intergenic 45.0%
AGAGAGGGAGAAATTACCGG+TGG + chr5_4:2319647-2319666 None:intergenic 50.0%
CAGCTTCATTCCCAGACACT+CGG + chr5_4:2320118-2320137 None:intergenic 50.0%
! GCTTAGAAAGCGCGACATAC+CGG - chr5_4:2320137-2320156 Msa0829430:intron 50.0%
ATCAAGGCCACCAACTCAAC+AGG + chr5_4:2321021-2321040 None:intergenic 50.0%
CTCCACACCATGTGAGATTG+AGG + chr5_4:2321044-2321063 None:intergenic 50.0%
CTCAATCTCACATGGTGTGG+AGG - chr5_4:2321042-2321061 Msa0829430:intron 50.0%
ATCACTTGGCACAATGGCTC+GGG + chr5_4:2321303-2321322 None:intergenic 50.0%
CATCACTTGGCACAATGGCT+CGG + chr5_4:2321304-2321323 None:intergenic 50.0%
! CGAAGCATCACTTGGCACAA+TGG + chr5_4:2321309-2321328 None:intergenic 50.0%
TGCCAAGTGATGCTTCGAGT+GGG - chr5_4:2321312-2321331 Msa0829430:intron 50.0%
! TACGTGGTTGCCTGCCATTT+AGG - chr5_4:2321442-2321461 Msa0829430:intron 50.0%
GCGGGATAATCCAGACAACA+AGG - chr5_4:2321490-2321509 Msa0829430:intron 50.0%
ATCCACGGGAAAGCTTACTC+GGG - chr5_4:2322091-2322110 Msa0829430:CDS 50.0%
TTGATACCAGGCAATGGTCC+AGG + chr5_4:2322119-2322138 None:intergenic 50.0%
TCTTCCATCCATCAGGATCC+AGG + chr5_4:2322160-2322179 None:intergenic 50.0%
! GGATCCTGATGGATGGAAGA+CGG - chr5_4:2322160-2322179 Msa0829430:intron 50.0%
CATACCGTCTTCCATCCATC+AGG + chr5_4:2322167-2322186 None:intergenic 50.0%
CCTCAACAACCTCTTGCATG+TGG + chr5_4:2322289-2322308 None:intergenic 50.0%
CCACATGCAAGAGGTTGTTG+AGG - chr5_4:2322286-2322305 Msa0829430:intron 50.0%
AGGACTGCTCAAGCCTAACA+AGG + chr5_4:2322446-2322465 None:intergenic 50.0%
TTAAAGGGCAAGCCCACACT+TGG + chr5_4:2322579-2322598 None:intergenic 50.0%
TGCCCTTTAAGCAAGCAGCT+TGG - chr5_4:2322589-2322608 Msa0829430:CDS 50.0%
GTTCCTCAACAAGACTCGTC+AGG + chr5_4:2322624-2322643 None:intergenic 50.0%
TAGAAGCAACGTGGAGCCAA+TGG + chr5_4:2322763-2322782 None:intergenic 50.0%
GCTTACAGGTAGAAGCAACG+TGG + chr5_4:2322772-2322791 None:intergenic 50.0%
CTCAGGGTAACTGTAGTTCC+AGG - chr5_4:2323132-2323151 Msa0829430:intron 50.0%
GAGGTCAAACTTGTGACTCC+TGG + chr5_4:2323153-2323172 None:intergenic 50.0%
! AGAATAGCGGAACCCAACGA+AGG - chr5_4:2323173-2323192 Msa0829430:intron 50.0%
CGCCTCCCTTCTGTTTACTT+TGG - chr5_4:2323747-2323766 Msa0829430:intron 50.0%
AGAGAGCCTGGTCCTGTCAA+AGG - chr5_4:2321204-2321223 Msa0829430:intron 55.0%
TTGCCTCCTTTGACAGGACC+AGG + chr5_4:2321213-2321232 None:intergenic 55.0%
GTGCCAAGTGATGCTTCGAG+TGG - chr5_4:2321311-2321330 Msa0829430:intron 55.0%
! CACCCACTCGAAGCATCACT+TGG + chr5_4:2321317-2321336 None:intergenic 55.0%
GTATGGAGCTGCTTCGTACG+CGG - chr5_4:2321471-2321490 Msa0829430:intron 55.0%
TATGGAGCTGCTTCGTACGC+GGG - chr5_4:2321472-2321491 Msa0829430:intron 55.0%
TTCCCGAGTAAGCTTTCCCG+TGG + chr5_4:2322096-2322115 None:intergenic 55.0%
GGAAAGCTTACTCGGGAACC+TGG - chr5_4:2322098-2322117 Msa0829430:CDS 55.0%
ACTGCATGCCTGGATCCTGA+TGG - chr5_4:2322149-2322168 Msa0829430:intron 55.0%
CATGCCTGGATCCTGATGGA+TGG - chr5_4:2322153-2322172 Msa0829430:intron 55.0%
GGAAGGGGAAGGCTTGTGAA+TGG - chr5_4:2322244-2322263 Msa0829430:intron 55.0%
AGCAAGGACAACCTGAGAGG+AGG + chr5_4:2322852-2322871 None:intergenic 55.0%
CGTTGGGTTCCGCTATTCTG+AGG + chr5_4:2323172-2323191 None:intergenic 55.0%
GGGAAGAGCGACAGATAGAG+AGG + chr5_4:2323360-2323379 None:intergenic 55.0%
GAGCCTGGTCCTGTCAAAGG+AGG - chr5_4:2321207-2321226 Msa0829430:intron 60.0%
! TGGCACAATGGCTCGGGAGT+GGG + chr5_4:2321297-2321316 None:intergenic 60.0%
! TTGGCACAATGGCTCGGGAG+TGG + chr5_4:2321298-2321317 None:intergenic 60.0%
GCAAGCCCACACTTGGAGCA+TGG + chr5_4:2322572-2322591 None:intergenic 60.0%
TCGCTCTTGGGTGACGATGG+AGG + chr5_4:2322937-2322956 None:intergenic 60.0%
GTCTCGCTCTTGGGTGACGA+TGG + chr5_4:2322940-2322959 None:intergenic 60.0%
CGGGAACCTGGACCATTGCC+TGG - chr5_4:2322110-2322129 Msa0829430:intron 65.0%
Chromosome Type Strat End Strand Name
chr5_4 gene 2319458 2324383 2319458 ID=Msa0829430;Name=Msa0829430
chr5_4 mRNA 2319458 2324383 2319458 ID=Msa0829430-mRNA-1;Parent=Msa0829430;Name=Msa0829430-mRNA-1;_AED=0.10;_eAED=0.10;_QI=95|0.87|0.88|1|0.75|0.77|9|270|311
chr5_4 exon 2319458 2319769 2319458 ID=Msa0829430-mRNA-1:exon:803;Parent=Msa0829430-mRNA-1
chr5_4 exon 2321660 2321800 2321660 ID=Msa0829430-mRNA-1:exon:802;Parent=Msa0829430-mRNA-1
chr5_4 exon 2322020 2322127 2322020 ID=Msa0829430-mRNA-1:exon:801;Parent=Msa0829430-mRNA-1
chr5_4 exon 2322330 2322377 2322330 ID=Msa0829430-mRNA-1:exon:800;Parent=Msa0829430-mRNA-1
chr5_4 exon 2322473 2322685 2322473 ID=Msa0829430-mRNA-1:exon:799;Parent=Msa0829430-mRNA-1
chr5_4 exon 2322894 2322958 2322894 ID=Msa0829430-mRNA-1:exon:798;Parent=Msa0829430-mRNA-1
chr5_4 exon 2323721 2323734 2323721 ID=Msa0829430-mRNA-1:exon:797;Parent=Msa0829430-mRNA-1
chr5_4 exon 2323836 2324043 2323836 ID=Msa0829430-mRNA-1:exon:796;Parent=Msa0829430-mRNA-1
chr5_4 exon 2324192 2324383 2324192 ID=Msa0829430-mRNA-1:exon:795;Parent=Msa0829430-mRNA-1
chr5_4 five_prime_UTR 2324289 2324383 2324289 ID=Msa0829430-mRNA-1:five_prime_utr;Parent=Msa0829430-mRNA-1
chr5_4 CDS 2324192 2324288 2324192 ID=Msa0829430-mRNA-1:cds;Parent=Msa0829430-mRNA-1
chr5_4 CDS 2323836 2324043 2323836 ID=Msa0829430-mRNA-1:cds;Parent=Msa0829430-mRNA-1
chr5_4 CDS 2323721 2323734 2323721 ID=Msa0829430-mRNA-1:cds;Parent=Msa0829430-mRNA-1
chr5_4 CDS 2322894 2322958 2322894 ID=Msa0829430-mRNA-1:cds;Parent=Msa0829430-mRNA-1
chr5_4 CDS 2322473 2322685 2322473 ID=Msa0829430-mRNA-1:cds;Parent=Msa0829430-mRNA-1
chr5_4 CDS 2322330 2322377 2322330 ID=Msa0829430-mRNA-1:cds;Parent=Msa0829430-mRNA-1
chr5_4 CDS 2322020 2322127 2322020 ID=Msa0829430-mRNA-1:cds;Parent=Msa0829430-mRNA-1
chr5_4 CDS 2321660 2321800 2321660 ID=Msa0829430-mRNA-1:cds;Parent=Msa0829430-mRNA-1
chr5_4 CDS 2319728 2319769 2319728 ID=Msa0829430-mRNA-1:cds;Parent=Msa0829430-mRNA-1
chr5_4 three_prime_UTR 2319458 2319727 2319458 ID=Msa0829430-mRNA-1:three_prime_utr;Parent=Msa0829430-mRNA-1
Gene Sequence

>Msa0829430

ATGGTGAGAGTAATTCCCATCGCTAGTTTTTCAATTCTACCCACTCTTTCTCTCTTCAATCGCTCTCCCCGAATCTCTTTCTCTCATTTTTCCACCGCTGCAGTTTCACAAACCCATAGTTTTGGCTTGAAAGCTTGTAGATTATTCAAACAAAATGGAAACTCTCTCAAAGTGATGTCATCTGGGAACGTGTCATCATCAGTCACTGCTGCTTCATCAGAAAATGTACTGGAATGGGTCAAACAAGATAAAAGAAGAATGCTTCATGTTGTTTATCGTGTTGGTGACTTGGATAGAACTATTAAATTTTATACCGAGTATTACGGAGTTGATAAATATGATATTGGAACTGCATTTGGCCATTTCGGTATTGCTGTTGATGATATTACAAAAACAGTGGAACTAATAAGAGCTAAAGGTGGAAAAATAACTAGAGAGCCTGGTCCTGTCAAAGGAGGCAAAACAGTTATCGCATTTGTTGAAGATCCTGATGGTTACAAATTTGAACTTTTGGAAAGAGGTCCCACTCCCGAGCCATTGTGCCAAGTGATGCTTCGAGTGGGTGATCTTAACCGTTCAATTGAATTTTATGAGAAGGCTTTTGGTATGGAGCTGCTTCGTACGCGGGATAATCCAGACAACAAGTATACCATAGCAATGCTTGGTTATGGTCCAGAAGATAAAACGACTGTTCTGGAGTTGACTTACAATTATGGAGTCACTGAATATGATAAAGGAAATGCTTATGCTCAGATTGCAATAGGTACAGATGATGTGTACAAAACTGCCGAAGCGATTAAACTATCCACGGGAAAGCTTACTCGGGAACCTGGACCATTGCCTGGTATCAACACAAAAATTACTGCATGCCTGGATCCTGATGGATGGAAGACGGTTTTTGTAGATAATATTGATTTTCTAAAGGAGTTGGAGTAG

Protein sequence

>Msa0829430

MVRVIPIASFSILPTLSLFNRSPRISFSHFSTAAVSQTHSFGLKACRLFKQNGNSLKVMSSGNVSSSVTAASSENVLEWVKQDKRRMLHVVYRVGDLDRTIKFYTEYYGVDKYDIGTAFGHFGIAVDDITKTVELIRAKGGKITREPGPVKGGKTVIAFVEDPDGYKFELLERGPTPEPLCQVMLRVGDLNRSIEFYEKAFGMELLRTRDNPDNKYTIAMLGYGPEDKTTVLELTYNYGVTEYDKGNAYAQIAIGTDDVYKTAEAIKLSTGKLTREPGPLPGINTKITACLDPDGWKTVFVDNIDFLKELE*