Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1266170 | XP_013458443.1 | 96.032 | 126 | 5 | 0 | 1 | 126 | 1 | 126 | 7.04e-86 | 256 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1266170 | I3SLJ0 | 96.032 | 126 | 5 | 0 | 1 | 126 | 1 | 126 | 3.36e-86 | 256 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0001830 | Msa1266170 | 0.818967 | 1.486741e-52 | -8.615850e-47 |
| Msa0061500 | Msa1266170 | 0.814945 | 1.189327e-51 | -8.615850e-47 |
| Msa0071480 | Msa1266170 | 0.803190 | 3.924151e-49 | -8.615850e-47 |
| Msa0090380 | Msa1266170 | 0.804066 | 2.581859e-49 | -8.615850e-47 |
| Msa0119440 | Msa1266170 | 0.828932 | 6.829590e-55 | -8.615850e-47 |
| Msa0631320 | Msa1266170 | 0.845564 | 3.753929e-59 | -8.615850e-47 |
| Msa0649100 | Msa1266170 | 0.812841 | 3.460788e-51 | -8.615850e-47 |
| Msa0662520 | Msa1266170 | 0.854334 | 1.319337e-61 | -8.615850e-47 |
| Msa0748660 | Msa1266170 | 0.802218 | 6.226784e-49 | -8.615850e-47 |
| Msa0775560 | Msa1266170 | 0.825004 | 5.937453e-54 | -8.615850e-47 |
| Msa0805910 | Msa1266170 | 0.824200 | 9.179369e-54 | -8.615850e-47 |
| Msa0812950 | Msa1266170 | 0.828582 | 8.296880e-55 | -8.615850e-47 |
| Msa0823440 | Msa1266170 | 0.804644 | 1.956299e-49 | -8.615850e-47 |
| Msa0136630 | Msa1266170 | 0.810840 | 9.435175e-51 | -8.615850e-47 |
| Msa0137860 | Msa1266170 | 0.803616 | 3.202735e-49 | -8.615850e-47 |
| Msa0152560 | Msa1266170 | 0.815822 | 7.590721e-52 | -8.615850e-47 |
| Msa0162690 | Msa1266170 | 0.807602 | 4.666308e-50 | -8.615850e-47 |
| Msa0187310 | Msa1266170 | 0.839764 | 1.303392e-57 | -8.615850e-47 |
| Msa0189610 | Msa1266170 | 0.842227 | 2.941879e-58 | -8.615850e-47 |
| Msa0196880 | Msa1266170 | 0.812968 | 3.245666e-51 | -8.615850e-47 |
| Msa0227360 | Msa1266170 | 0.801195 | 1.009812e-48 | -8.615850e-47 |
| Msa1225580 | Msa1266170 | 0.817823 | 2.699545e-52 | -8.615850e-47 |
| Msa1266170 | Msa1285200 | 0.822730 | 2.026425e-53 | -8.615850e-47 |
| Msa1266170 | Msa1312440 | 0.818011 | 2.448624e-52 | -8.615850e-47 |
| Msa1266170 | Msa1352660 | 0.806438 | 8.227726e-50 | -8.615850e-47 |
| Msa1266170 | Msa1355510 | 0.806678 | 7.321000e-50 | -8.615850e-47 |
| Msa1266170 | Msa1355890 | 0.807339 | 5.303980e-50 | -8.615850e-47 |
| Msa1266170 | Msa1404270 | 0.859195 | 4.891540e-63 | -8.615850e-47 |
| Msa1266170 | Msa1421210 | 0.814692 | 1.353814e-51 | -8.615850e-47 |
| Msa1266170 | Msa1430130 | 0.812384 | 4.356714e-51 | -8.615850e-47 |
| Msa1266170 | Msa1433410 | 0.805983 | 1.025515e-49 | -8.615850e-47 |
| Msa1266170 | Msa1443640 | 0.816639 | 4.986430e-52 | -8.615850e-47 |
| Msa1266170 | Msa1460750 | 0.814291 | 1.660241e-51 | -8.615850e-47 |
| Msa0364790 | Msa1266170 | 0.817811 | 2.717659e-52 | -8.615850e-47 |
| Msa0380600 | Msa1266170 | 0.814552 | 1.453688e-51 | -8.615850e-47 |
| Msa0430240 | Msa1266170 | 0.814107 | 1.822742e-51 | -8.615850e-47 |
| Msa0264680 | Msa1266170 | 0.807522 | 4.850721e-50 | -8.615850e-47 |
| Msa0276430 | Msa1266170 | 0.831886 | 1.294140e-55 | -8.615850e-47 |
| Msa0302730 | Msa1266170 | 0.830582 | 2.707673e-55 | -8.615850e-47 |
| Msa0319290 | Msa1266170 | 0.827083 | 1.902978e-54 | -8.615850e-47 |
| Msa1107200 | Msa1266170 | 0.807908 | 4.015951e-50 | -8.615850e-47 |
| Msa1150790 | Msa1266170 | 0.807508 | 4.884778e-50 | -8.615850e-47 |
| Msa1220880 | Msa1266170 | 0.973442 | 1.955455e-136 | -8.615850e-47 |
| Msa0500400 | Msa1266170 | 0.818453 | 1.944460e-52 | -8.615850e-47 |
| Msa0534870 | Msa1266170 | 0.830423 | 2.962414e-55 | -8.615850e-47 |
| Msa0853440 | Msa1266170 | 0.819270 | 1.268229e-52 | -8.615850e-47 |
| Msa0945130 | Msa1266170 | 0.826064 | 3.330033e-54 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1266170 | MtrunA17_Chr4g0070831 | 96.032 | 126 | 5 | 0 | 1 | 126 | 1 | 126 | 6.47e-90 | 256 |
| Msa1266170 | MtrunA17_Chr8g0343111 | 74.603 | 63 | 16 | 0 | 51 | 113 | 8 | 70 | 2.35e-29 | 102 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1266170 | AT4G26060.1 | 58.879 | 107 | 42 | 1 | 18 | 124 | 14 | 118 | 5.63e-43 | 138 |
| Msa1266170 | AT5G57060.7 | 50.413 | 121 | 55 | 2 | 7 | 124 | 1 | 119 | 1.03e-38 | 127 |
| Msa1266170 | AT5G57060.4 | 50.413 | 121 | 55 | 2 | 7 | 124 | 1 | 119 | 1.03e-38 | 127 |
| Msa1266170 | AT5G57060.9 | 50.413 | 121 | 55 | 2 | 7 | 124 | 1 | 119 | 1.03e-38 | 127 |
| Msa1266170 | AT5G57060.5 | 50.413 | 121 | 55 | 2 | 7 | 124 | 1 | 119 | 1.03e-38 | 127 |
| Msa1266170 | AT5G57060.1 | 50.413 | 121 | 55 | 2 | 7 | 124 | 1 | 119 | 1.03e-38 | 127 |
| Msa1266170 | AT5G57060.3 | 53.704 | 108 | 48 | 1 | 17 | 124 | 23 | 128 | 4.93e-38 | 125 |
| Msa1266170 | AT5G57060.6 | 53.704 | 108 | 48 | 1 | 17 | 124 | 23 | 128 | 4.93e-38 | 125 |
| Msa1266170 | AT5G57060.8 | 67.500 | 80 | 26 | 0 | 45 | 124 | 13 | 92 | 5.63e-38 | 124 |
| Msa1266170 | AT5G57060.2 | 67.500 | 80 | 26 | 0 | 45 | 124 | 13 | 92 | 5.63e-38 | 124 |
| Msa1266170 | AT1G54217.8 | 56.164 | 73 | 31 | 1 | 42 | 113 | 2 | 74 | 1.52e-22 | 85.5 |
| Msa1266170 | AT1G54217.2 | 56.164 | 73 | 31 | 1 | 42 | 113 | 2 | 74 | 1.52e-22 | 85.5 |
| Msa1266170 | AT1G54217.6 | 62.500 | 64 | 23 | 1 | 51 | 113 | 10 | 73 | 2.72e-22 | 84.7 |
| Msa1266170 | AT1G54217.1 | 62.500 | 64 | 23 | 1 | 51 | 113 | 10 | 73 | 2.72e-22 | 84.7 |
| Msa1266170 | AT1G54217.4 | 62.500 | 64 | 23 | 1 | 51 | 113 | 10 | 73 | 2.72e-22 | 84.7 |
| Msa1266170 | AT1G54217.7 | 62.500 | 64 | 23 | 1 | 51 | 113 | 10 | 73 | 2.72e-22 | 84.7 |
| Msa1266170 | AT1G54217.5 | 62.500 | 64 | 23 | 1 | 51 | 113 | 10 | 73 | 2.72e-22 | 84.7 |
| Msa1266170 | AT1G54217.3 | 62.500 | 64 | 23 | 1 | 51 | 113 | 10 | 73 | 2.72e-22 | 84.7 |
Find 55 sgRNAs with CRISPR-Local
Find 321 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TATGCAACAATTCTCTATTT+TGG | 0.056794 | 8_2:+70923236 | Msa1266170:CDS |
| CCCCAGGGAACGGGCGGGGC+TGG | 0.245034 | 8_2:+70923277 | Msa1266170:CDS |
| TCCCAGCCCCGCCCGTTCCC+TGG | 0.253175 | 8_2:-70923279 | None:intergenic |
| CCCAGCCCCGCCCGTTCCCT+GGG | 0.307231 | 8_2:-70923278 | None:intergenic |
| CCCAGGGAACGGGCGGGGCT+GGG | 0.312102 | 8_2:+70923278 | Msa1266170:CDS |
| CCATGCTTTGGATGCGGAAT+TGG | 0.323771 | 8_2:+70923081 | Msa1266170:CDS |
| GTCCTCTGGATCTCTAATTA+AGG | 0.363548 | 8_2:-70923028 | None:intergenic |
| GAAGGACCCCAGGGAACGGG+CGG | 0.380252 | 8_2:+70923271 | Msa1266170:CDS |
| GATAAGCCCCTCCCATGCTT+TGG | 0.389734 | 8_2:+70923069 | Msa1266170:CDS |
| AGTGTTATTTGAACAATTCA+AGG | 0.392260 | 8_2:+70919858 | Msa1266170:five_prime_UTR |
| TCGGAAGGACCCCAGGGAAC+GGG | 0.392848 | 8_2:+70923268 | Msa1266170:CDS |
| TCTACAAAATCCATGGATAA+AGG | 0.398211 | 8_2:+70919898 | Msa1266170:exon |
| AGGACCCCAGGGAACGGGCG+GGG | 0.417190 | 8_2:+70923273 | Msa1266170:CDS |
| ATCAAAATTCTTAAAAGAAA+CGG | 0.429179 | 8_2:-70920663 | None:intergenic |
| TTTAAGAAAGGGCGTGGAAT+CGG | 0.452413 | 8_2:+70920634 | Msa1266170:CDS |
| TTTCCCTTTCCGTGAGCCAT+TGG | 0.452477 | 8_2:-70923000 | None:intergenic |
| GATCCAGAGGACTTCCAGTC+AGG | 0.454913 | 8_2:+70923039 | Msa1266170:CDS |
| AGAGAATGTTGATTTAAGAA+AGG | 0.460736 | 8_2:+70920622 | Msa1266170:CDS |
| CATTTCAGTACCTTTATCCA+TGG | 0.469644 | 8_2:-70919908 | None:intergenic |
| ATCATTATCGGAAGGACCCC+AGG | 0.469804 | 8_2:+70923261 | Msa1266170:CDS |
| GATCCAATGGCTCACGGAAA+GGG | 0.471290 | 8_2:+70922997 | Msa1266170:CDS |
| GAGAATGTTGATTTAAGAAA+GGG | 0.481994 | 8_2:+70920623 | Msa1266170:CDS |
| GATTTATTTGCCCTCCTATG+TGG | 0.489666 | 8_2:+70923210 | Msa1266170:CDS |
| TGTTGATTTAAGAAAGGGCG+TGG | 0.497594 | 8_2:+70920628 | Msa1266170:CDS |
| CTTTGTTGTTGCAGATGGTA+GGG | 0.498784 | 8_2:+70920595 | Msa1266170:intron |
| AGTCCTGACTGGAAGTCCTC+TGG | 0.502119 | 8_2:-70923042 | None:intergenic |
| CCTTTGTTGTTGCAGATGGT+AGG | 0.504377 | 8_2:+70920594 | Msa1266170:intron |
| AAGGACCCCAGGGAACGGGC+GGG | 0.511815 | 8_2:+70923272 | Msa1266170:CDS |
| CAAAGTATCTACAAAATCCA+TGG | 0.514321 | 8_2:+70919891 | Msa1266170:exon |
| CCAATTCCGCATCCAAAGCA+TGG | 0.518285 | 8_2:-70923081 | None:intergenic |
| ATCGGAAGGACCCCAGGGAA+CGG | 0.537686 | 8_2:+70923267 | Msa1266170:CDS |
| CTTTATGTGGCAGGACAAGC+AGG | 0.542559 | 8_2:+70922973 | Msa1266170:intron |
| CCCCTCCCATGCTTTGGATG+CGG | 0.543713 | 8_2:+70923075 | Msa1266170:CDS |
| CTTGAATTACTCCGAGCAAA+GGG | 0.545855 | 8_2:-70920695 | None:intergenic |
| TTCCGCATCCAAAGCATGGG+AGG | 0.555498 | 8_2:-70923077 | None:intergenic |
| TCTTGAATTACTCCGAGCAA+AGG | 0.556216 | 8_2:-70920696 | None:intergenic |
| AGATCCAATGGCTCACGGAA+AGG | 0.578977 | 8_2:+70922996 | Msa1266170:CDS |
| GCTTATCATAAAGTCCTGAC+TGG | 0.578995 | 8_2:-70923053 | None:intergenic |
| TCCGCATCCAAAGCATGGGA+GGG | 0.588988 | 8_2:-70923076 | None:intergenic |
| GCTTTGGATGCGGAATTGGA+TGG | 0.591155 | 8_2:+70923085 | Msa1266170:CDS |
| CAATTCCGCATCCAAAGCAT+GGG | 0.593569 | 8_2:-70923080 | None:intergenic |
| GTTGCATAGAACCACATAGG+AGG | 0.594452 | 8_2:-70923221 | None:intergenic |
| CCGCATCCAAAGCATGGGAG+GGG | 0.606480 | 8_2:-70923075 | None:intergenic |
| AGGACAAGCAGGAGATCCAA+TGG | 0.609106 | 8_2:+70922984 | Msa1266170:intron |
| TGCCTTAATTAGAGATCCAG+AGG | 0.616154 | 8_2:+70923026 | Msa1266170:CDS |
| TTGCATAGAACCACATAGGA+GGG | 0.616476 | 8_2:-70923220 | None:intergenic |
| TGAATTGTTCAAATAACACT+CGG | 0.618519 | 8_2:-70919855 | None:intergenic |
| ATTGTTGCATAGAACCACAT+AGG | 0.645975 | 8_2:-70923224 | None:intergenic |
| TTTGTTGATTCAAGTCAACA+AGG | 0.658733 | 8_2:+70919647 | Msa1266170:five_prime_UTR |
| TCATTATCGGAAGGACCCCA+GGG | 0.659027 | 8_2:+70923262 | Msa1266170:CDS |
| GCAGGAGATCCAATGGCTCA+CGG | 0.665431 | 8_2:+70922991 | Msa1266170:CDS |
| TGTTGTTGCAGATGGTAGGG+TGG | 0.672021 | 8_2:+70920598 | Msa1266170:intron |
| AGAGATTACAGCAATTGCAG+AGG | 0.673672 | 8_2:-70923303 | None:intergenic |
| CCAGCCCCGCCCGTTCCCTG+GGG | 0.674263 | 8_2:-70923277 | None:intergenic |
| TTTGCTCGGAGTAATTCAAG+AGG | 0.694585 | 8_2:+70920698 | Msa1266170:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTTAAAAATAAAATAAAAT+AGG | - | chr8_2:70920774-70920793 | None:intergenic | 0.0% |
| !! | ATAATATAATATGTTTCTTA+TGG | + | chr8_2:70920255-70920274 | Msa1266170:intron | 10.0% |
| !! | AAATAAAATAAAATAGGTAA+TGG | - | chr8_2:70920768-70920787 | None:intergenic | 10.0% |
| !!! | TGATTTTTTTTTTTTTGAAA+CGG | - | chr8_2:70920939-70920958 | None:intergenic | 10.0% |
| !! | TAAATCATAAAAATAATTGT+TGG | - | chr8_2:70921689-70921708 | None:intergenic | 10.0% |
| !!! | TAATTTTCGTTTTTATTTTT+GGG | - | chr8_2:70922531-70922550 | None:intergenic | 10.0% |
| !!! | TTTTGTAAGAAAAATAAAAT+TGG | - | chr8_2:70922894-70922913 | None:intergenic | 10.0% |
| !! | GAAACTTTAAATTAAATTAA+AGG | + | chr8_2:70924177-70924196 | Msa1266170:intron | 10.0% |
| !!! | AATTGCTTAATTAAGATTTT+TGG | + | chr8_2:70919601-70919620 | Msa1266170:five_prime_UTR | 15.0% |
| !!! | ATTGCTTAATTAAGATTTTT+GGG | + | chr8_2:70919602-70919621 | Msa1266170:five_prime_UTR | 15.0% |
| !! | ATCAAAATTCTTAAAAGAAA+CGG | - | chr8_2:70920666-70920685 | None:intergenic | 15.0% |
| !!! | TTAAGAATTTTGATCTTTTA+AGG | + | chr8_2:70920672-70920691 | Msa1266170:CDS | 15.0% |
| !! | TAATCTGTATAATAAATACT+AGG | - | chr8_2:70920965-70920984 | None:intergenic | 15.0% |
| !! | ATATATTCTACTATAAATAG+AGG | + | chr8_2:70921627-70921646 | Msa1266170:intron | 15.0% |
| !!! | CAAAACTATTTTATCAAATT+TGG | + | chr8_2:70921716-70921735 | Msa1266170:intron | 15.0% |
| !!! | GTAATTTTCGTTTTTATTTT+TGG | - | chr8_2:70922532-70922551 | None:intergenic | 15.0% |
| !! | CATATTAAAATGATGAAAAT+TGG | + | chr8_2:70922551-70922570 | Msa1266170:intron | 15.0% |
| !!! | ATATAATTTGTCTTTTTGAA+TGG | + | chr8_2:70924044-70924063 | Msa1266170:intron | 15.0% |
| !! | ACATTTGAATTAAAAATAGA+GGG | - | chr8_2:70924368-70924387 | None:intergenic | 15.0% |
| !!! | TATTTTTAATTCAAATGTGA+AGG | + | chr8_2:70924370-70924389 | Msa1266170:intron | 15.0% |
| !! | GAAAAATTTATCAAATAAGA+AGG | - | chr8_2:70924579-70924598 | None:intergenic | 15.0% |
| !!! | TATTTTTTTAATATAGCAAC+TGG | + | chr8_2:70924644-70924663 | Msa1266170:intron | 15.0% |
| !! | ATTTGTAATTTATTACATGG+AGG | - | chr8_2:70920298-70920317 | None:intergenic | 20.0% |
| !! | TCCATGTAATAAATTACAAA+TGG | + | chr8_2:70920297-70920316 | Msa1266170:intron | 20.0% |
| !! | TCCATTTGTAATTTATTACA+TGG | - | chr8_2:70920301-70920320 | None:intergenic | 20.0% |
| !! | TGTAATAAATTACAAATGGA+AGG | + | chr8_2:70920301-70920320 | Msa1266170:intron | 20.0% |
| !! | TAGTTTATCATTATTTGGAT+TGG | + | chr8_2:70920507-70920526 | Msa1266170:intron | 20.0% |
| !! | ACTTAAGTAGAAAAATCATA+TGG | - | chr8_2:70920743-70920762 | None:intergenic | 20.0% |
| !! | TTTAATACTAGGATTTGATT+AGG | - | chr8_2:70920911-70920930 | None:intergenic | 20.0% |
| !! | TCAATTTGCAATTATATCAT+TGG | + | chr8_2:70921020-70921039 | Msa1266170:intron | 20.0% |
| !! | TAATAGTGAATATTAGGATT+TGG | - | chr8_2:70921548-70921567 | None:intergenic | 20.0% |
| !! | AAATCCTAATATTCACTATT+AGG | + | chr8_2:70921547-70921566 | Msa1266170:intron | 20.0% |
| !! | TAATCCTAATAGTGAATATT+AGG | - | chr8_2:70921554-70921573 | None:intergenic | 20.0% |
| !! | TAGGATTAGAATTATAGATT+AGG | + | chr8_2:70921566-70921585 | Msa1266170:intron | 20.0% |
| !! | TAGAATTATAGATTAGGATT+TGG | + | chr8_2:70921572-70921591 | Msa1266170:intron | 20.0% |
| !! | ATGTTTATTACCTAGAAAAT+AGG | + | chr8_2:70922401-70922420 | Msa1266170:intron | 20.0% |
| !!! | TTGTCATGTGAATTTTTTAT+AGG | + | chr8_2:70922588-70922607 | Msa1266170:intron | 20.0% |
| !! | ATTCATCTATATCGATATAA+TGG | - | chr8_2:70922703-70922722 | None:intergenic | 20.0% |
| !! | AGTAATATGCTAATGATTTA+TGG | + | chr8_2:70922805-70922824 | Msa1266170:intron | 20.0% |
| !!! | TTAAATTGCAGATTTCTTTT+TGG | + | chr8_2:70923188-70923207 | Msa1266170:intron | 20.0% |
| !! | TAGTTAAGTTCAAATAAACA+AGG | + | chr8_2:70923487-70923506 | Msa1266170:intron | 20.0% |
| !!! | ATCTCATGTTACTATATTTT+TGG | + | chr8_2:70923686-70923705 | Msa1266170:intron | 20.0% |
| !! | TTTGATACAAATTTGTGTAT+AGG | + | chr8_2:70923844-70923863 | Msa1266170:intron | 20.0% |
| !! | AGATATCATGTTAATTTAGA+TGG | + | chr8_2:70923963-70923982 | Msa1266170:intron | 20.0% |
| !!! | AATGGTCAAAATAAGAATTT+TGG | + | chr8_2:70924062-70924081 | Msa1266170:intron | 20.0% |
| !! | CACATTTGAATTAAAAATAG+AGG | - | chr8_2:70924369-70924388 | None:intergenic | 20.0% |
| !! | TATACCTACTATAAATTTGA+TGG | + | chr8_2:70924609-70924628 | Msa1266170:intron | 20.0% |
| !! | ATGATTTGATTGATTTCTGA+AGG | + | chr8_2:70919691-70919710 | Msa1266170:intron | 25.0% |
| !!! | TTGATTCACTTTTGAAAAAC+AGG | + | chr8_2:70919828-70919847 | Msa1266170:intron | 25.0% |
| ! | TGAATTGTTCAAATAACACT+CGG | - | chr8_2:70919858-70919877 | None:intergenic | 25.0% |
| !!! | AGTGTTATTTGAACAATTCA+AGG | + | chr8_2:70919858-70919877 | Msa1266170:five_prime_UTR | 25.0% |
| ! | AACATCTATGCAAATTAATC+AGG | - | chr8_2:70919949-70919968 | None:intergenic | 25.0% |
| !!! | AAAATATGTTTTGTTAGCAC+TGG | + | chr8_2:70920059-70920078 | Msa1266170:intron | 25.0% |
| !!! | CTACTAGGTTTTAACTTTTA+AGG | + | chr8_2:70920142-70920161 | Msa1266170:intron | 25.0% |
| ! | TATATTATGAAACTCTCACA+TGG | - | chr8_2:70920243-70920262 | None:intergenic | 25.0% |
| ! | AATAAATTACAAATGGAAGG+AGG | + | chr8_2:70920304-70920323 | Msa1266170:intron | 25.0% |
| !! | TGGTCTAGTTTATCATTATT+TGG | + | chr8_2:70920502-70920521 | Msa1266170:intron | 25.0% |
| ! | TTCCATTTGAAAATGCTTAA+TGG | - | chr8_2:70920571-70920590 | None:intergenic | 25.0% |
| !!! | AGAGAATGTTGATTTAAGAA+AGG | + | chr8_2:70920622-70920641 | Msa1266170:CDS | 25.0% |
| !!! | GAGAATGTTGATTTAAGAAA+GGG | + | chr8_2:70920623-70920642 | Msa1266170:CDS | 25.0% |
| ! | AAACGGCAAAATTTAATACT+AGG | - | chr8_2:70920922-70920941 | None:intergenic | 25.0% |
| ! | ACAGATTAGAATCATAGATT+AGG | + | chr8_2:70920977-70920996 | Msa1266170:intron | 25.0% |
| ! | GAGAGAAAATTCATCAAAAA+AGG | - | chr8_2:70921123-70921142 | None:intergenic | 25.0% |
| !! | TCTTATTATCTCTTTTCATC+CGG | + | chr8_2:70921184-70921203 | Msa1266170:intron | 25.0% |
| ! | TAGAGAAAATACAAACAACA+AGG | - | chr8_2:70921450-70921469 | None:intergenic | 25.0% |
| !!! | TTAAGTTTGTTACAATGTGT+TGG | - | chr8_2:70921480-70921499 | None:intergenic | 25.0% |
| !!! | ACTTAGTAAGCTTTATTTTG+AGG | + | chr8_2:70921501-70921520 | Msa1266170:intron | 25.0% |
| !!! | CTTAGTAAGCTTTATTTTGA+GGG | + | chr8_2:70921502-70921521 | Msa1266170:intron | 25.0% |
| !!! | TTAGTAAGCTTTATTTTGAG+GGG | + | chr8_2:70921503-70921522 | Msa1266170:intron | 25.0% |
| ! | TATAGATTAGGATTTGGATT+AGG | + | chr8_2:70921578-70921597 | Msa1266170:intron | 25.0% |
| ! | TTTATCAAATTTGGCTAAAC+TGG | + | chr8_2:70921725-70921744 | Msa1266170:intron | 25.0% |
| ! | TGGTTTATGATAGAACATTA+TGG | - | chr8_2:70921941-70921960 | None:intergenic | 25.0% |
| ! | GTTCTATCATAAACCATATT+TGG | + | chr8_2:70921945-70921964 | Msa1266170:intron | 25.0% |
| ! | AACTATTAGGAAAGATTTAG+AGG | - | chr8_2:70921985-70922004 | None:intergenic | 25.0% |
| ! | AGACTATAAGAGAAACTATT+AGG | - | chr8_2:70921998-70922017 | None:intergenic | 25.0% |
| ! | TTATGATGCAACAATTACAA+AGG | - | chr8_2:70922051-70922070 | None:intergenic | 25.0% |
| ! | CTTTCATCAATTATACAAAG+AGG | - | chr8_2:70922084-70922103 | None:intergenic | 25.0% |
| !!! | TCACTTTTGTTTGATAACTT+TGG | - | chr8_2:70922183-70922202 | None:intergenic | 25.0% |
| ! | ATTACTAGTATTTCAATCCT+AGG | - | chr8_2:70922338-70922357 | None:intergenic | 25.0% |
| ! | CATTGTATTTGATAAATGCA+TGG | - | chr8_2:70922373-70922392 | None:intergenic | 25.0% |
| !!! | TTTTCGTTTTTATTTTTGGG+TGG | - | chr8_2:70922528-70922547 | None:intergenic | 25.0% |
| !! | GATGAAAATTGGACTTTTAA+TGG | + | chr8_2:70922562-70922581 | Msa1266170:intron | 25.0% |
| !! | TATATCGATATAATGGAAGT+CGG | - | chr8_2:70922696-70922715 | None:intergenic | 25.0% |
| ! | AGAATAGACTCATTAAATAC+TGG | + | chr8_2:70922859-70922878 | Msa1266170:intron | 25.0% |
| !! | TATGCAACAATTCTCTATTT+TGG | + | chr8_2:70923236-70923255 | Msa1266170:CDS | 25.0% |
| !! | ATGCAACAATTCTCTATTTT+GGG | + | chr8_2:70923237-70923256 | Msa1266170:CDS | 25.0% |
| !!! | TCTATTTTGGGAATCATTAT+CGG | + | chr8_2:70923249-70923268 | Msa1266170:CDS | 25.0% |
| ! | TAACTTGATACGAAAAAGAA+AGG | - | chr8_2:70923767-70923786 | None:intergenic | 25.0% |
| ! | ACACAAATTTGTATCAAAAG+TGG | - | chr8_2:70923842-70923861 | None:intergenic | 25.0% |
| ! | TTTAAAAACGTCAACAATGT+TGG | - | chr8_2:70924105-70924124 | None:intergenic | 25.0% |
| !!! | AGGAAGATTTTTTTAACAGA+AGG | - | chr8_2:70924345-70924364 | None:intergenic | 25.0% |
| ! | TTTGAATTAAAAATAGAGGG+AGG | - | chr8_2:70924365-70924384 | None:intergenic | 25.0% |
| !!! | TTTTAATTCAAATGTGAAGG+TGG | + | chr8_2:70924373-70924392 | Msa1266170:intron | 25.0% |
| ! | GTATATAACAGCTTCAATAT+AGG | + | chr8_2:70924461-70924480 | Msa1266170:intron | 25.0% |
| !! | TTTGTTGATTCAAGTCAACA+AGG | + | chr8_2:70919647-70919666 | Msa1266170:five_prime_UTR | 30.0% |
| TGAGATCAGATATATGCATT+TGG | - | chr8_2:70919722-70919741 | None:intergenic | 30.0% | |
| ! | CAAAGTATCTACAAAATCCA+TGG | + | chr8_2:70919891-70919910 | Msa1266170:exon | 30.0% |
| TCTACAAAATCCATGGATAA+AGG | + | chr8_2:70919898-70919917 | Msa1266170:exon | 30.0% | |
| TGATGTGAATTCAGAAATTG+TGG | + | chr8_2:70920364-70920383 | Msa1266170:intron | 30.0% | |
| TTGAAAATGCTTAATGGAGA+TGG | - | chr8_2:70920565-70920584 | None:intergenic | 30.0% | |
| ! | CTCCATTAAGCATTTTCAAA+TGG | + | chr8_2:70920566-70920585 | Msa1266170:intron | 30.0% |
| GTAATTCAAGAGGTAACAAT+AGG | + | chr8_2:70920708-70920727 | Msa1266170:intron | 30.0% | |
| !!! | GTCAGTTCTTATTTTGTTAG+TGG | + | chr8_2:70920808-70920827 | Msa1266170:intron | 30.0% |
| !!! | AGTTCTTATTTTGTTAGTGG+AGG | + | chr8_2:70920811-70920830 | Msa1266170:intron | 30.0% |
| GGATTTGATTAGGATTGATA+AGG | - | chr8_2:70920901-70920920 | None:intergenic | 30.0% | |
| GGATGAAAAGAGATAATAAG+AGG | - | chr8_2:70921185-70921204 | None:intergenic | 30.0% | |
| TCACTATAGCAAAGACAATT+GGG | - | chr8_2:70921390-70921409 | None:intergenic | 30.0% | |
| !!! | TAGTAAGCTTTATTTTGAGG+GGG | + | chr8_2:70921504-70921523 | Msa1266170:intron | 30.0% |
| ! | TAATGAGTTGGATCCAAATA+TGG | - | chr8_2:70921961-70921980 | None:intergenic | 30.0% |
| AGATTTAGAGGTTAATGAGT+TGG | - | chr8_2:70921973-70921992 | None:intergenic | 30.0% | |
| !! | TTTGATAACTTTGGTTCTAC+TGG | - | chr8_2:70922174-70922193 | None:intergenic | 30.0% |
| ! | GAGATTCTTATTTATAGCCT+AGG | + | chr8_2:70922318-70922337 | Msa1266170:intron | 30.0% |
| TTTGATAAATGCATGGTAGT+GGG | - | chr8_2:70922366-70922385 | None:intergenic | 30.0% | |
| ATTTGATAAATGCATGGTAG+TGG | - | chr8_2:70922367-70922386 | None:intergenic | 30.0% | |
| AAGTCATTATAGTTGCTAGT+GGG | - | chr8_2:70922446-70922465 | None:intergenic | 30.0% | |
| TAAGTCATTATAGTTGCTAG+TGG | - | chr8_2:70922447-70922466 | None:intergenic | 30.0% | |
| ATCAAAGTCAAAAGACAAAG+GGG | - | chr8_2:70922732-70922751 | None:intergenic | 30.0% | |
| GATCAAAGTCAAAAGACAAA+GGG | - | chr8_2:70922733-70922752 | None:intergenic | 30.0% | |
| AGATCAAAGTCAAAAGACAA+AGG | - | chr8_2:70922734-70922753 | None:intergenic | 30.0% | |
| !!! | TGTCTTTTGACTTTGATCTT+AGG | + | chr8_2:70922735-70922754 | Msa1266170:intron | 30.0% |
| !!! | GTCTTTTGACTTTGATCTTA+GGG | + | chr8_2:70922736-70922755 | Msa1266170:intron | 30.0% |
| AGTGCAAGTAGTTATTTGAA+GGG | - | chr8_2:70922955-70922974 | None:intergenic | 30.0% | |
| AAGTGCAAGTAGTTATTTGA+AGG | - | chr8_2:70922956-70922975 | None:intergenic | 30.0% | |
| ATAACTACTTGCACTTTATG+TGG | + | chr8_2:70922960-70922979 | Msa1266170:intron | 30.0% | |
| TACACACAAATAGACAAGAA+GGG | - | chr8_2:70923347-70923366 | None:intergenic | 30.0% | |
| ATACACACAAATAGACAAGA+AGG | - | chr8_2:70923348-70923367 | None:intergenic | 30.0% | |
| GTTAAACTGCTAAATAGAGT+TGG | + | chr8_2:70923423-70923442 | Msa1266170:intron | 30.0% | |
| TCAAATAAACAAGGAAGCTT+TGG | + | chr8_2:70923496-70923515 | Msa1266170:intron | 30.0% | |
| GTATTTGATCCATGAAAACA+TGG | - | chr8_2:70923539-70923558 | None:intergenic | 30.0% | |
| TTATGCCAGCTTAAATGATA+TGG | - | chr8_2:70923597-70923616 | None:intergenic | 30.0% | |
| !! | AGTGGACTAAGAATAAAAAC+TGG | - | chr8_2:70923824-70923843 | None:intergenic | 30.0% |
| AGATATTGCAACAGTCATTA+TGG | + | chr8_2:70923989-70924008 | Msa1266170:intron | 30.0% | |
| TAGCGATGTCTAAATTGTTA+TGG | + | chr8_2:70924264-70924283 | Msa1266170:intron | 30.0% | |
| CACACCATCAAATTTATAGT+AGG | - | chr8_2:70924616-70924635 | None:intergenic | 30.0% | |
| !!! | CGTTTCTTCGTTACTTTTTC+TGG | + | chr8_2:70919487-70919506 | Msa1266170:five_prime_UTR | 35.0% |
| TAGAAGCAGCAGATAAATAC+AGG | - | chr8_2:70919772-70919791 | None:intergenic | 35.0% | |
| CATTTCAGTACCTTTATCCA+TGG | - | chr8_2:70919911-70919930 | None:intergenic | 35.0% | |
| TTACCTATGCATCGAAATCA+CGG | - | chr8_2:70920040-70920059 | None:intergenic | 35.0% | |
| GTTTGTATGATTGAGCTACT+AGG | + | chr8_2:70920127-70920146 | Msa1266170:intron | 35.0% | |
| TTAAATGCTAACAACAGCTC+AGG | - | chr8_2:70920196-70920215 | None:intergenic | 35.0% | |
| AAATTACAAATGGAAGGAGG+AGG | + | chr8_2:70920307-70920326 | Msa1266170:intron | 35.0% | |
| !! | ATTTCCTTTGTTGTTGCAGA+TGG | + | chr8_2:70920590-70920609 | Msa1266170:intron | 35.0% |
| !!! | CTTATTTTGTTAGTGGAGGA+AGG | + | chr8_2:70920815-70920834 | Msa1266170:intron | 35.0% |
| ! | TAGAGTGATAAAGCGTTCAA+AGG | - | chr8_2:70920845-70920864 | None:intergenic | 35.0% |
| ! | AATTTTCTCTCTCCTCTACA+AGG | + | chr8_2:70921132-70921151 | Msa1266170:intron | 35.0% |
| ! | CTGGTTGAATCAAATTTTCC+CGG | - | chr8_2:70921302-70921321 | None:intergenic | 35.0% |
| GTCACTATAGCAAAGACAAT+TGG | - | chr8_2:70921391-70921410 | None:intergenic | 35.0% | |
| !! | ACTTATAGTCTTGGTTCTAC+CGG | - | chr8_2:70922224-70922243 | None:intergenic | 35.0% |
| GGGTTAAGAACTTATAGTCT+TGG | - | chr8_2:70922233-70922252 | None:intergenic | 35.0% | |
| AGTTCTTAACCCAAGAACAA+AGG | + | chr8_2:70922241-70922260 | Msa1266170:intron | 35.0% | |
| ! | AGAGCTTTTCCTTTGTTCTT+GGG | - | chr8_2:70922253-70922272 | None:intergenic | 35.0% |
| ! | CATGTTAGTGCCTATTTTCT+AGG | - | chr8_2:70922414-70922433 | None:intergenic | 35.0% |
| !! | CTACTTTGAAGCATTTAGAG+AGG | + | chr8_2:70922472-70922491 | Msa1266170:intron | 35.0% |
| TCAAAGTCAAAAGACAAAGG+GGG | - | chr8_2:70922731-70922750 | None:intergenic | 35.0% | |
| CTGCACATTATCTCTAAACT+AGG | - | chr8_2:70922841-70922860 | None:intergenic | 35.0% | |
| ATTGTTGCATAGAACCACAT+AGG | - | chr8_2:70923227-70923246 | None:intergenic | 35.0% | |
| !! | TTTTGGGAATCATTATCGGA+AGG | + | chr8_2:70923253-70923272 | Msa1266170:CDS | 35.0% |
| CTGAGCTAATAGTATTTACC+TGG | - | chr8_2:70923460-70923479 | None:intergenic | 35.0% | |
| ! | TGAAAACATGGTTTGTCAAC+TGG | - | chr8_2:70923527-70923546 | None:intergenic | 35.0% |
| ! | GTTGACAAACCATGTTTTCA+TGG | + | chr8_2:70923527-70923546 | Msa1266170:intron | 35.0% |
| ACAAGCCATATCATTTAAGC+TGG | + | chr8_2:70923589-70923608 | Msa1266170:intron | 35.0% | |
| TCACAACTTATAGCAACTCA+AGG | - | chr8_2:70923623-70923642 | None:intergenic | 35.0% | |
| ! | TTGAGTTGCTATAAGTTGTG+AGG | + | chr8_2:70923622-70923641 | Msa1266170:intron | 35.0% |
| GTAACATGAGATATCTGCAA+TGG | - | chr8_2:70923678-70923697 | None:intergenic | 35.0% | |
| !!! | ATTTTTGGCGAAACTACGTT+AGG | + | chr8_2:70923701-70923720 | Msa1266170:intron | 35.0% |
| TGTTATGGTGATAAACTTGC+AGG | + | chr8_2:70924279-70924298 | Msa1266170:intron | 35.0% | |
| ACATTTGAAAGCGATTCTGA+CGG | + | chr8_2:70924412-70924431 | Msa1266170:intron | 35.0% | |
| !!! | AAGTTGCGTTTTGTTTGTGA+AGG | + | chr8_2:70924493-70924512 | Msa1266170:intron | 35.0% |
| GCAGCAGATAAATACAGGAA+AGG | - | chr8_2:70919767-70919786 | None:intergenic | 40.0% | |
| TGGAGGAATAATCATCAGTC+TGG | - | chr8_2:70920281-70920300 | None:intergenic | 40.0% | |
| AGTAATACGTATCACCAGAG+TGG | + | chr8_2:70920454-70920473 | Msa1266170:intron | 40.0% | |
| AGACCATAGACTTGAAAGCT+TGG | - | chr8_2:70920488-70920507 | None:intergenic | 40.0% | |
| !! | CTTTGTTGTTGCAGATGGTA+GGG | + | chr8_2:70920595-70920614 | Msa1266170:intron | 40.0% |
| !! | TGTTGATTTAAGAAAGGGCG+TGG | + | chr8_2:70920628-70920647 | Msa1266170:CDS | 40.0% |
| ! | TTTAAGAAAGGGCGTGGAAT+CGG | + | chr8_2:70920634-70920653 | Msa1266170:CDS | 40.0% |
| !!! | ATCTTTTAAGGCCCTTTGCT+CGG | + | chr8_2:70920684-70920703 | Msa1266170:CDS | 40.0% |
| CTTGAATTACTCCGAGCAAA+GGG | - | chr8_2:70920698-70920717 | None:intergenic | 40.0% | |
| TCTTGAATTACTCCGAGCAA+AGG | - | chr8_2:70920699-70920718 | None:intergenic | 40.0% | |
| TTTGCTCGGAGTAATTCAAG+AGG | + | chr8_2:70920698-70920717 | Msa1266170:CDS | 40.0% | |
| !! | ATAAGGCGACTTGGTGATTT+GGG | - | chr8_2:70920884-70920903 | None:intergenic | 40.0% |
| TTAGGATTGATAAGGCGACT+TGG | - | chr8_2:70920893-70920912 | None:intergenic | 40.0% | |
| TACAAGGATCTGCTATGGTT+TGG | + | chr8_2:70921148-70921167 | Msa1266170:intron | 40.0% | |
| AGTAGGACAAAAACGTTGAC+CGG | - | chr8_2:70921206-70921225 | None:intergenic | 40.0% | |
| ! | TTTTCGAAAATGGGTCTCAC+TGG | - | chr8_2:70921336-70921355 | None:intergenic | 40.0% |
| ! | GACTGGTGGTTTTCGAAAAT+GGG | - | chr8_2:70921345-70921364 | None:intergenic | 40.0% |
| ! | TGACTGGTGGTTTTCGAAAA+TGG | - | chr8_2:70921346-70921365 | None:intergenic | 40.0% |
| ATGATTTCAAAGGTGACTGG+TGG | - | chr8_2:70921359-70921378 | None:intergenic | 40.0% | |
| TGGATGATTTCAAAGGTGAC+TGG | - | chr8_2:70921362-70921381 | None:intergenic | 40.0% | |
| TCCAGTTGTGCTACCATTTA+CGG | + | chr8_2:70921412-70921431 | Msa1266170:intron | 40.0% | |
| AACAACCAAGCCTTACTAAG+TGG | + | chr8_2:70921890-70921909 | Msa1266170:intron | 40.0% | |
| ACAACCAAGCCTTACTAAGT+GGG | + | chr8_2:70921891-70921910 | Msa1266170:intron | 40.0% | |
| GAAATTGATACGTGACCGAT+AGG | + | chr8_2:70922103-70922122 | Msa1266170:intron | 40.0% | |
| !! | TGTTTTCAAGACGGTCCTAT+CGG | - | chr8_2:70922121-70922140 | None:intergenic | 40.0% |
| !! | TTCCTTGCCTGTTTTCAAGA+CGG | - | chr8_2:70922130-70922149 | None:intergenic | 40.0% |
| !! | ATAACTTTGGTTCTACTGGC+AGG | - | chr8_2:70922170-70922189 | None:intergenic | 40.0% |
| ! | GAGAGCTTTTCCTTTGTTCT+TGG | - | chr8_2:70922254-70922273 | None:intergenic | 40.0% |
| ! | TTGAAGCATTTAGAGAGGCT+AGG | + | chr8_2:70922477-70922496 | Msa1266170:intron | 40.0% |
| TCAAGAGTTCACTAAGCATG+TGG | - | chr8_2:70922621-70922640 | None:intergenic | 40.0% | |
| TGCCTTAATTAGAGATCCAG+AGG | + | chr8_2:70923026-70923045 | Msa1266170:CDS | 40.0% | |
| GTCCTCTGGATCTCTAATTA+AGG | - | chr8_2:70923031-70923050 | None:intergenic | 40.0% | |
| GCTTATCATAAAGTCCTGAC+TGG | - | chr8_2:70923056-70923075 | None:intergenic | 40.0% | |
| GATTTATTTGCCCTCCTATG+TGG | + | chr8_2:70923210-70923229 | Msa1266170:CDS | 40.0% | |
| TTGCATAGAACCACATAGGA+GGG | - | chr8_2:70923223-70923242 | None:intergenic | 40.0% | |
| AGAGATTACAGCAATTGCAG+AGG | - | chr8_2:70923306-70923325 | None:intergenic | 40.0% | |
| CATTTGTGAATGCATGCATG+AGG | - | chr8_2:70923381-70923400 | None:intergenic | 40.0% | |
| GATATCTGCAATGGCAGAAA+AGG | - | chr8_2:70923669-70923688 | None:intergenic | 40.0% | |
| ATCTGATTGTGACCTCATTG+TGG | - | chr8_2:70923933-70923952 | None:intergenic | 40.0% | |
| ATGTCTGCTACACTGAAAGT+TGG | + | chr8_2:70924532-70924551 | Msa1266170:intron | 40.0% | |
| TGTCTGCTACACTGAAAGTT+GGG | + | chr8_2:70924533-70924552 | Msa1266170:intron | 40.0% | |
| AGTTGGGAGAAAATGATACG+TGG | + | chr8_2:70924549-70924568 | Msa1266170:intron | 40.0% | |
| TATGCATCGAAATCACGGCA+AGG | - | chr8_2:70920035-70920054 | None:intergenic | 45.0% | |
| TTGCCGTGATTTCGATGCAT+AGG | + | chr8_2:70920034-70920053 | Msa1266170:intron | 45.0% | |
| !! | TTAGCACTGGTGTGATAAGC+AGG | + | chr8_2:70920072-70920091 | Msa1266170:intron | 45.0% |
| !! | TAGCACTGGTGTGATAAGCA+GGG | + | chr8_2:70920073-70920092 | Msa1266170:intron | 45.0% |
| ! | AGGAGGTGTGTTCATTCATC+AGG | + | chr8_2:70920324-70920343 | Msa1266170:intron | 45.0% |
| ! | GCTCCAAGCTTTCAAGTCTA+TGG | + | chr8_2:70920482-70920501 | Msa1266170:intron | 45.0% |
| TGGTTGACTGAGCAAAAGTG+TGG | + | chr8_2:70920527-70920546 | Msa1266170:intron | 45.0% | |
| CCTACCATCTGCAACAACAA+AGG | - | chr8_2:70920597-70920616 | None:intergenic | 45.0% | |
| !! | CCTTTGTTGTTGCAGATGGT+AGG | + | chr8_2:70920594-70920613 | Msa1266170:intron | 45.0% |
| !! | GATAAGGCGACTTGGTGATT+TGG | - | chr8_2:70920885-70920904 | None:intergenic | 45.0% |
| GCCTAAGTGGAAGTTATGCT+CGG | - | chr8_2:70921058-70921077 | None:intergenic | 45.0% | |
| AAATCATCCAGTAGCTGCAG+TGG | - | chr8_2:70921092-70921111 | None:intergenic | 45.0% | |
| TCCTCTACAAGGATCTGCTA+TGG | + | chr8_2:70921143-70921162 | Msa1266170:intron | 45.0% | |
| ACCATAGCAGATCCTTGTAG+AGG | - | chr8_2:70921147-70921166 | None:intergenic | 45.0% | |
| GCACAATGAATGTGCACAGT+AGG | - | chr8_2:70921234-70921253 | None:intergenic | 45.0% | |
| ACTGACGTGAAAGAGAAGCA+AGG | - | chr8_2:70921263-70921282 | None:intergenic | 45.0% | |
| TTGCTTCTCTTTCACGTCAG+TGG | + | chr8_2:70921262-70921281 | Msa1266170:intron | 45.0% | |
| TGCTTCTCTTTCACGTCAGT+GGG | + | chr8_2:70921263-70921282 | Msa1266170:intron | 45.0% | |
| ! | AGTGGGTTTCTCTTTGCATC+CGG | + | chr8_2:70921280-70921299 | Msa1266170:intron | 45.0% |
| GGCTCACTGGATGATTTCAA+AGG | - | chr8_2:70921369-70921388 | None:intergenic | 45.0% | |
| GTAAATGGTAGCACAACTGG+AGG | - | chr8_2:70921413-70921432 | None:intergenic | 45.0% | |
| GAGGTGAGTGTAGTCTGATT+TGG | + | chr8_2:70921646-70921665 | Msa1266170:intron | 45.0% | |
| TCCACACATGTACTTGTGAG+AGG | + | chr8_2:70921775-70921794 | Msa1266170:intron | 45.0% | |
| CCACACATGTACTTGTGAGA+GGG | + | chr8_2:70921776-70921795 | Msa1266170:intron | 45.0% | |
| CACACATGTACTTGTGAGAG+GGG | + | chr8_2:70921777-70921796 | Msa1266170:intron | 45.0% | |
| CAACCAAGCCTTACTAAGTG+GGG | + | chr8_2:70921892-70921911 | Msa1266170:intron | 45.0% | |
| TTGAGCACGTAACACACTCA+AGG | - | chr8_2:70922024-70922043 | None:intergenic | 45.0% | |
| GATAGGACCGTCTTGAAAAC+AGG | + | chr8_2:70922120-70922139 | Msa1266170:intron | 45.0% | |
| GAGTTCACTAAGCATGTGGA+AGG | - | chr8_2:70922617-70922636 | None:intergenic | 45.0% | |
| GTTCTGCACGTCATTTACAG+CGG | + | chr8_2:70922661-70922680 | Msa1266170:intron | 45.0% | |
| GTCAAAAGACAAAGGGGGAA+TGG | - | chr8_2:70922726-70922745 | None:intergenic | 45.0% | |
| CTACTTGCACTTTATGTGGC+AGG | + | chr8_2:70922964-70922983 | Msa1266170:intron | 45.0% | |
| CAATTCCGCATCCAAAGCAT+GGG | - | chr8_2:70923083-70923102 | None:intergenic | 45.0% | |
| CAATCATAGCAGCGAGCAAA+TGG | - | chr8_2:70923143-70923162 | None:intergenic | 45.0% | |
| GTTGCATAGAACCACATAGG+AGG | - | chr8_2:70923224-70923243 | None:intergenic | 45.0% | |
| AAGAAGGGAGCAGAGAGAAA+GGG | - | chr8_2:70923332-70923351 | None:intergenic | 45.0% | |
| !! | GAGTTGGTTTGAACATAGCC+AGG | + | chr8_2:70923439-70923458 | Msa1266170:intron | 45.0% |
| TGGCAGAAAAGGAACTTGGT+TGG | - | chr8_2:70923658-70923677 | None:intergenic | 45.0% | |
| GCAATGGCAGAAAAGGAACT+TGG | - | chr8_2:70923662-70923681 | None:intergenic | 45.0% | |
| !! | GTCTAATTGGTGGTGATGAG+TGG | - | chr8_2:70923900-70923919 | None:intergenic | 45.0% |
| TCATCAAGGGGTCTAATTGG+TGG | - | chr8_2:70923910-70923929 | None:intergenic | 45.0% | |
| TGGTCATCAAGGGGTCTAAT+TGG | - | chr8_2:70923913-70923932 | None:intergenic | 45.0% | |
| ACCTCATTGTGGTCATCAAG+GGG | - | chr8_2:70923922-70923941 | None:intergenic | 45.0% | |
| GACCTCATTGTGGTCATCAA+GGG | - | chr8_2:70923923-70923942 | None:intergenic | 45.0% | |
| TGACCTCATTGTGGTCATCA+AGG | - | chr8_2:70923924-70923943 | None:intergenic | 45.0% | |
| !! | AGCACTGGTGTGATAAGCAG+GGG | + | chr8_2:70920074-70920093 | Msa1266170:intron | 50.0% |
| ACGTATCACCAGAGTGGTCT+TGG | + | chr8_2:70920460-70920479 | Msa1266170:intron | 50.0% | |
| TGTTGTTGCAGATGGTAGGG+TGG | + | chr8_2:70920598-70920617 | Msa1266170:intron | 50.0% | |
| GCCGAGCATAACTTCCACTT+AGG | + | chr8_2:70921054-70921073 | Msa1266170:intron | 50.0% | |
| GTGCACAGTAGGACAGAAGT+AGG | - | chr8_2:70921223-70921242 | None:intergenic | 50.0% | |
| GTGGGTTTCTCTTTGCATCC+GGG | + | chr8_2:70921281-70921300 | Msa1266170:intron | 50.0% | |
| GCAAAGACAATTGGGCTCAC+TGG | - | chr8_2:70921382-70921401 | None:intergenic | 50.0% | |
| GCCGTAAATGGTAGCACAAC+TGG | - | chr8_2:70921416-70921435 | None:intergenic | 50.0% | |
| GTCGTAGCTTCAGCCGTAAA+TGG | - | chr8_2:70921428-70921447 | None:intergenic | 50.0% | |
| CCCTCTCACAAGTACATGTG+TGG | - | chr8_2:70921779-70921798 | None:intergenic | 50.0% | |
| CAAGCCTTACTAAGTGGGGT+CGG | + | chr8_2:70921896-70921915 | Msa1266170:intron | 50.0% | |
| GACCGTCTTGAAAACAGGCA+AGG | + | chr8_2:70922125-70922144 | Msa1266170:intron | 50.0% | |
| !! | ATAGTCTTGGTTCTACCGGC+AGG | - | chr8_2:70922220-70922239 | None:intergenic | 50.0% |
| CTTTATGTGGCAGGACAAGC+AGG | + | chr8_2:70922973-70922992 | Msa1266170:intron | 50.0% | |
| AGGACAAGCAGGAGATCCAA+TGG | + | chr8_2:70922984-70923003 | Msa1266170:intron | 50.0% | |
| AGATCCAATGGCTCACGGAA+AGG | + | chr8_2:70922996-70923015 | Msa1266170:CDS | 50.0% | |
| GATCCAATGGCTCACGGAAA+GGG | + | chr8_2:70922997-70923016 | Msa1266170:CDS | 50.0% | |
| TTTCCCTTTCCGTGAGCCAT+TGG | - | chr8_2:70923003-70923022 | None:intergenic | 50.0% | |
| CCAATTCCGCATCCAAAGCA+TGG | - | chr8_2:70923084-70923103 | None:intergenic | 50.0% | |
| ! | CCATGCTTTGGATGCGGAAT+TGG | + | chr8_2:70923081-70923100 | Msa1266170:CDS | 50.0% |
| ! | GCTTTGGATGCGGAATTGGA+TGG | + | chr8_2:70923085-70923104 | Msa1266170:CDS | 50.0% |
| TAGCAGCGAGCAAATGGAGA+AGG | - | chr8_2:70923137-70923156 | None:intergenic | 50.0% | |
| ATCATTATCGGAAGGACCCC+AGG | + | chr8_2:70923261-70923280 | Msa1266170:CDS | 50.0% | |
| TCATTATCGGAAGGACCCCA+GGG | + | chr8_2:70923262-70923281 | Msa1266170:CDS | 50.0% | |
| CAAGAAGGGAGCAGAGAGAA+AGG | - | chr8_2:70923333-70923352 | None:intergenic | 50.0% | |
| ! | ACCCCTTGATGACCACAATG+AGG | + | chr8_2:70923918-70923937 | Msa1266170:intron | 50.0% |
| CTTGCAGGCATTAGTGTGCT+CGG | + | chr8_2:70924294-70924313 | Msa1266170:intron | 50.0% | |
| AGGCATTAGTGTGCTCGGTA+GGG | + | chr8_2:70924299-70924318 | Msa1266170:intron | 50.0% | |
| ! | GTAGCAGACATTTTCAGCGC+TGG | - | chr8_2:70924523-70924542 | None:intergenic | 50.0% |
| ! | GCAAAAGTGTGGAGTTCGCG+AGG | + | chr8_2:70920538-70920557 | Msa1266170:intron | 55.0% |
| !! | GCGACTTGGTGATTTGGGTG+AGG | - | chr8_2:70920879-70920898 | None:intergenic | 55.0% |
| GTGGAAGTTATGCTCGGCAG+AGG | - | chr8_2:70921052-70921071 | None:intergenic | 55.0% | |
| ! | CTCACTGGAGAAAGTGCAGC+TGG | - | chr8_2:70921321-70921340 | None:intergenic | 55.0% |
| CGACCCCACTTAGTAAGGCT+TGG | - | chr8_2:70921898-70921917 | None:intergenic | 55.0% | |
| GTAGCCGACCCCACTTAGTA+AGG | - | chr8_2:70921903-70921922 | None:intergenic | 55.0% | |
| ACTAAGTGGGGTCGGCTACA+TGG | + | chr8_2:70921904-70921923 | Msa1266170:intron | 55.0% | |
| !! | TTGGTTCTACTGGCAGGTCG+CGG | - | chr8_2:70922164-70922183 | None:intergenic | 55.0% |
| GCAGGAGATCCAATGGCTCA+CGG | + | chr8_2:70922991-70923010 | Msa1266170:CDS | 55.0% | |
| GATCCAGAGGACTTCCAGTC+AGG | + | chr8_2:70923039-70923058 | Msa1266170:CDS | 55.0% | |
| AGTCCTGACTGGAAGTCCTC+TGG | - | chr8_2:70923045-70923064 | None:intergenic | 55.0% | |
| GATAAGCCCCTCCCATGCTT+TGG | + | chr8_2:70923069-70923088 | Msa1266170:CDS | 55.0% | |
| TCCGCATCCAAAGCATGGGA+GGG | - | chr8_2:70923079-70923098 | None:intergenic | 55.0% | |
| TTCCGCATCCAAAGCATGGG+AGG | - | chr8_2:70923080-70923099 | None:intergenic | 55.0% | |
| CAGGCATTAGTGTGCTCGGT+AGG | + | chr8_2:70924298-70924317 | Msa1266170:intron | 55.0% | |
| GCTTGGAGCCAAGACCACTC+TGG | - | chr8_2:70920471-70920490 | None:intergenic | 60.0% | |
| GGCAGCAGTAGGTGCCTAAG+TGG | - | chr8_2:70921071-70921090 | None:intergenic | 60.0% | |
| GTAGCTGCAGTGGCAGCAGT+AGG | - | chr8_2:70921082-70921101 | None:intergenic | 60.0% | |
| ACTGCTGCCACTGCAGCTAC+TGG | + | chr8_2:70921082-70921101 | Msa1266170:intron | 60.0% | |
| CTACTGGCAGGTCGCGGTTA+GGG | - | chr8_2:70922158-70922177 | None:intergenic | 60.0% | |
| TCTACTGGCAGGTCGCGGTT+AGG | - | chr8_2:70922159-70922178 | None:intergenic | 60.0% | |
| !! | TTGGTTCTACCGGCAGGTCG+CGG | - | chr8_2:70922214-70922233 | None:intergenic | 60.0% |
| CCGCATCCAAAGCATGGGAG+GGG | - | chr8_2:70923078-70923097 | None:intergenic | 60.0% | |
| ! | CCCCTCCCATGCTTTGGATG+CGG | + | chr8_2:70923075-70923094 | Msa1266170:CDS | 60.0% |
| ATCGGAAGGACCCCAGGGAA+CGG | + | chr8_2:70923267-70923286 | Msa1266170:CDS | 60.0% | |
| AGACCCTAACCGCGACCTGC+CGG | + | chr8_2:70922202-70922221 | Msa1266170:intron | 65.0% | |
| CTACCGGCAGGTCGCGGTTA+GGG | - | chr8_2:70922208-70922227 | None:intergenic | 65.0% | |
| TCTACCGGCAGGTCGCGGTT+AGG | - | chr8_2:70922209-70922228 | None:intergenic | 65.0% | |
| TCGGAAGGACCCCAGGGAAC+GGG | + | chr8_2:70923268-70923287 | Msa1266170:CDS | 65.0% | |
| GAAGGACCCCAGGGAACGGG+CGG | + | chr8_2:70923271-70923290 | Msa1266170:CDS | 70.0% | |
| AAGGACCCCAGGGAACGGGC+GGG | + | chr8_2:70923272-70923291 | Msa1266170:CDS | 70.0% | |
| AGGACCCCAGGGAACGGGCG+GGG | + | chr8_2:70923273-70923292 | Msa1266170:CDS | 75.0% | |
| ! | CCAGCCCCGCCCGTTCCCTG+GGG | - | chr8_2:70923280-70923299 | None:intergenic | 80.0% |
| ! | CCCAGCCCCGCCCGTTCCCT+GGG | - | chr8_2:70923281-70923300 | None:intergenic | 80.0% |
| ! | CCCAGGGAACGGGCGGGGCT+GGG | + | chr8_2:70923278-70923297 | Msa1266170:CDS | 80.0% |
| ! | TCCCAGCCCCGCCCGTTCCC+TGG | - | chr8_2:70923282-70923301 | None:intergenic | 80.0% |
| ! | CCCCAGGGAACGGGCGGGGC+TGG | + | chr8_2:70923277-70923296 | Msa1266170:CDS | 85.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_2 | gene | 70919446 | 70924671 | 70919446 | ID=Msa1266170;Name=Msa1266170 |
| chr8_2 | mRNA | 70919446 | 70924671 | 70919446 | ID=Msa1266170-mRNA-1;Parent=Msa1266170;Name=Msa1266170-mRNA-1;_AED=0.28;_eAED=0.29;_QI=283|0.8|0.83|1|0.6|0.5|6|0|126 |
| chr8_2 | exon | 70919446 | 70919668 | 70919446 | ID=Msa1266170-mRNA-1:exon:23643;Parent=Msa1266170-mRNA-1 |
| chr8_2 | exon | 70919850 | 70919919 | 70919850 | ID=Msa1266170-mRNA-1:exon:23644;Parent=Msa1266170-mRNA-1 |
| chr8_2 | exon | 70920609 | 70920719 | 70920609 | ID=Msa1266170-mRNA-1:exon:23645;Parent=Msa1266170-mRNA-1 |
| chr8_2 | exon | 70922986 | 70923112 | 70922986 | ID=Msa1266170-mRNA-1:exon:23646;Parent=Msa1266170-mRNA-1 |
| chr8_2 | exon | 70923199 | 70923316 | 70923199 | ID=Msa1266170-mRNA-1:exon:23647;Parent=Msa1266170-mRNA-1 |
| chr8_2 | exon | 70924660 | 70924671 | 70924660 | ID=Msa1266170-mRNA-1:exon:23648;Parent=Msa1266170-mRNA-1 |
| chr8_2 | five_prime_UTR | 70919446 | 70919668 | 70919446 | ID=Msa1266170-mRNA-1:five_prime_utr;Parent=Msa1266170-mRNA-1 |
| chr8_2 | five_prime_UTR | 70919850 | 70919909 | 70919850 | ID=Msa1266170-mRNA-1:five_prime_utr;Parent=Msa1266170-mRNA-1 |
| chr8_2 | CDS | 70919910 | 70919919 | 70919910 | ID=Msa1266170-mRNA-1:cds;Parent=Msa1266170-mRNA-1 |
| chr8_2 | CDS | 70920609 | 70920719 | 70920609 | ID=Msa1266170-mRNA-1:cds;Parent=Msa1266170-mRNA-1 |
| chr8_2 | CDS | 70922986 | 70923112 | 70922986 | ID=Msa1266170-mRNA-1:cds;Parent=Msa1266170-mRNA-1 |
| chr8_2 | CDS | 70923199 | 70923316 | 70923199 | ID=Msa1266170-mRNA-1:cds;Parent=Msa1266170-mRNA-1 |
| chr8_2 | CDS | 70924660 | 70924671 | 70924660 | ID=Msa1266170-mRNA-1:cds;Parent=Msa1266170-mRNA-1 |
| Gene Sequence |
| Protein sequence |
