Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1150790 | XP_003623196.1 | 72.768 | 224 | 13 | 2 | 1 | 176 | 1 | 224 | 1.16e-104 | 309 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1150790 | sp|P32110|GSTX6_SOYBN | 53.778 | 225 | 55 | 3 | 1 | 176 | 1 | 225 | 2.77e-71 | 218 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1150790 | G7L6H0 | 72.768 | 224 | 13 | 2 | 1 | 176 | 1 | 224 | 5.55e-105 | 309 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0001830 | Msa1150790 | 0.809029 | 2.315603e-50 | -8.615850e-47 |
| Msa0007470 | Msa1150790 | 0.845519 | 3.860165e-59 | -8.615850e-47 |
| Msa0010490 | Msa1150790 | 0.804374 | 2.227903e-49 | -8.615850e-47 |
| Msa0012710 | Msa1150790 | 0.804406 | 2.193239e-49 | -8.615850e-47 |
| Msa0015090 | Msa1150790 | 0.802011 | 6.867079e-49 | -8.615850e-47 |
| Msa0015460 | Msa1150790 | 0.810186 | 1.306641e-50 | -8.615850e-47 |
| Msa0015480 | Msa1150790 | 0.813031 | 3.144431e-51 | -8.615850e-47 |
| Msa0017320 | Msa1150790 | 0.819573 | 1.082170e-52 | -8.615850e-47 |
| Msa0037540 | Msa1150790 | -0.805405 | 1.356232e-49 | -8.615850e-47 |
| Msa0037590 | Msa1150790 | -0.804104 | 2.535310e-49 | -8.615850e-47 |
| Msa0042270 | Msa1150790 | 0.814832 | 1.260277e-51 | -8.615850e-47 |
| Msa0049910 | Msa1150790 | 0.836596 | 8.531246e-57 | -8.615850e-47 |
| Msa0055640 | Msa1150790 | 0.812245 | 4.672155e-51 | -8.615850e-47 |
| Msa0056060 | Msa1150790 | 0.838185 | 3.340610e-57 | -8.615850e-47 |
| Msa0061500 | Msa1150790 | 0.818701 | 1.708928e-52 | -8.615850e-47 |
| Msa0071250 | Msa1150790 | 0.803300 | 3.723619e-49 | -8.615850e-47 |
| Msa0092410 | Msa1150790 | 0.839167 | 1.862612e-57 | -8.615850e-47 |
| Msa0109590 | Msa1150790 | 0.815202 | 1.043176e-51 | -8.615850e-47 |
| Msa0613340 | Msa1150790 | 0.813506 | 2.472409e-51 | -8.615850e-47 |
| Msa0626850 | Msa1150790 | 0.811143 | 8.112235e-51 | -8.615850e-47 |
| Msa0631320 | Msa1150790 | 0.817869 | 2.636342e-52 | -8.615850e-47 |
| Msa0643320 | Msa1150790 | 0.810050 | 1.397270e-50 | -8.615850e-47 |
| Msa0654620 | Msa1150790 | 0.823023 | 1.731118e-53 | -8.615850e-47 |
| Msa0664970 | Msa1150790 | 0.810644 | 1.040498e-50 | -8.615850e-47 |
| Msa0667740 | Msa1150790 | 0.814324 | 1.632286e-51 | -8.615850e-47 |
| Msa0679810 | Msa1150790 | 0.834547 | 2.813749e-56 | -8.615850e-47 |
| Msa0683140 | Msa1150790 | 0.813654 | 2.294538e-51 | -8.615850e-47 |
| Msa0683600 | Msa1150790 | 0.820674 | 6.054906e-53 | -8.615850e-47 |
| Msa0689780 | Msa1150790 | 0.843081 | 1.744428e-58 | -8.615850e-47 |
| Msa0692650 | Msa1150790 | 0.804190 | 2.433277e-49 | -8.615850e-47 |
| Msa0703910 | Msa1150790 | 0.802826 | 4.666051e-49 | -8.615850e-47 |
| Msa0705990 | Msa1150790 | 0.820873 | 5.450252e-53 | -8.615850e-47 |
| Msa0711150 | Msa1150790 | 0.846867 | 1.658241e-59 | -8.615850e-47 |
| Msa0715410 | Msa1150790 | 0.819461 | 1.147601e-52 | -8.615850e-47 |
| Msa0721340 | Msa1150790 | 0.823631 | 1.248645e-53 | -8.615850e-47 |
| Msa0741400 | Msa1150790 | 0.806040 | 9.978181e-50 | -8.615850e-47 |
| Msa0742150 | Msa1150790 | 0.860579 | 1.872288e-63 | -8.615850e-47 |
| Msa0750850 | Msa1150790 | 0.816982 | 4.176949e-52 | -8.615850e-47 |
| Msa0767370 | Msa1150790 | 0.804291 | 2.318366e-49 | -8.615850e-47 |
| Msa0775560 | Msa1150790 | 0.818082 | 2.359185e-52 | -8.615850e-47 |
| Msa0786070 | Msa1150790 | 0.852236 | 5.268275e-61 | -8.615850e-47 |
| Msa0786780 | Msa1150790 | 0.814756 | 1.310078e-51 | -8.615850e-47 |
| Msa0788540 | Msa1150790 | 0.811789 | 5.872217e-51 | -8.615850e-47 |
| Msa0798290 | Msa1150790 | 0.805033 | 1.622874e-49 | -8.615850e-47 |
| Msa0801730 | Msa1150790 | 0.813990 | 1.934422e-51 | -8.615850e-47 |
| Msa0805910 | Msa1150790 | 0.828454 | 8.912426e-55 | -8.615850e-47 |
| Msa0805920 | Msa1150790 | 0.816002 | 6.922766e-52 | -8.615850e-47 |
| Msa0812950 | Msa1150790 | 0.843974 | 1.007386e-58 | -8.615850e-47 |
| Msa0823440 | Msa1150790 | 0.844607 | 6.807947e-59 | -8.615850e-47 |
| Msa0826760 | Msa1150790 | 0.803493 | 3.395865e-49 | -8.615850e-47 |
| Msa0830230 | Msa1150790 | 0.803145 | 4.007717e-49 | -8.615850e-47 |
| Msa0831850 | Msa1150790 | 0.805063 | 1.599212e-49 | -8.615850e-47 |
| Msa0129190 | Msa1150790 | -0.805661 | 1.198842e-49 | -8.615850e-47 |
| Msa0130520 | Msa1150790 | 0.818380 | 2.019884e-52 | -8.615850e-47 |
| Msa0135410 | Msa1150790 | 0.832744 | 7.937364e-56 | -8.615850e-47 |
| Msa0138020 | Msa1150790 | 0.845320 | 4.372170e-59 | -8.615850e-47 |
| Msa0142280 | Msa1150790 | 0.810147 | 1.331868e-50 | -8.615850e-47 |
| Msa0152560 | Msa1150790 | 0.842080 | 3.217002e-58 | -8.615850e-47 |
| Msa0155340 | Msa1150790 | 0.821845 | 3.250944e-53 | -8.615850e-47 |
| Msa0187830 | Msa1150790 | 0.806842 | 6.758499e-50 | -8.615850e-47 |
| Msa0189610 | Msa1150790 | 0.811756 | 5.971990e-51 | -8.615850e-47 |
| Msa0197610 | Msa1150790 | 0.810906 | 9.133092e-51 | -8.615850e-47 |
| Msa0201530 | Msa1150790 | 0.805994 | 1.020345e-49 | -8.615850e-47 |
| Msa0233370 | Msa1150790 | 0.805517 | 1.284959e-49 | -8.615850e-47 |
| Msa0236070 | Msa1150790 | 0.818956 | 1.495538e-52 | -8.615850e-47 |
| Msa0364790 | Msa1150790 | 0.821344 | 4.245240e-53 | -8.615850e-47 |
| Msa0371950 | Msa1150790 | 0.815015 | 1.148037e-51 | -8.615850e-47 |
| Msa0389210 | Msa1150790 | 0.813401 | 2.607975e-51 | -8.615850e-47 |
| Msa0403770 | Msa1150790 | 0.800776 | 1.229519e-48 | -8.615850e-47 |
| Msa0410580 | Msa1150790 | 0.802916 | 4.470194e-49 | -8.615850e-47 |
| Msa0417330 | Msa1150790 | 0.823498 | 1.340776e-53 | -8.615850e-47 |
| Msa0422180 | Msa1150790 | 0.809836 | 1.554192e-50 | -8.615850e-47 |
| Msa0434180 | Msa1150790 | 0.815025 | 1.141939e-51 | -8.615850e-47 |
| Msa0460110 | Msa1150790 | 0.801366 | 9.313601e-49 | -8.615850e-47 |
| Msa0481280 | Msa1150790 | 0.828353 | 9.423006e-55 | -8.615850e-47 |
| Msa0994370 | Msa1150790 | 0.822862 | 1.887568e-53 | -8.615850e-47 |
| Msa1013070 | Msa1150790 | 0.800966 | 1.124406e-48 | -8.615850e-47 |
| Msa1023300 | Msa1150790 | 0.888822 | 4.199349e-73 | -8.615850e-47 |
| Msa1023310 | Msa1150790 | 0.820606 | 6.276244e-53 | -8.615850e-47 |
| Msa1025080 | Msa1150790 | 0.819934 | 8.948746e-53 | -8.615850e-47 |
| Msa1026940 | Msa1150790 | 0.805622 | 1.221132e-49 | -8.615850e-47 |
| Msa1062020 | Msa1150790 | 0.835039 | 2.116318e-56 | -8.615850e-47 |
| Msa1062030 | Msa1150790 | 0.893367 | 6.715642e-75 | -8.615850e-47 |
| Msa1063420 | Msa1150790 | 0.802559 | 5.296053e-49 | -8.615850e-47 |
| Msa1063690 | Msa1150790 | 0.803783 | 2.956045e-49 | -8.615850e-47 |
| Msa1064250 | Msa1150790 | 0.807771 | 4.295270e-50 | -8.615850e-47 |
| Msa1071320 | Msa1150790 | 0.823179 | 1.591724e-53 | -8.615850e-47 |
| Msa1076960 | Msa1150790 | 0.821604 | 3.695717e-53 | -8.615850e-47 |
| Msa1077340 | Msa1150790 | 0.830394 | 3.010497e-55 | -8.615850e-47 |
| Msa1093100 | Msa1150790 | 0.801883 | 7.296935e-49 | -8.615850e-47 |
| Msa1107190 | Msa1150790 | 0.881609 | 2.082083e-70 | -8.615850e-47 |
| Msa0240270 | Msa1150790 | 0.809359 | 1.967023e-50 | -8.615850e-47 |
| Msa0241140 | Msa1150790 | 0.812520 | 4.067194e-51 | -8.615850e-47 |
| Msa0243480 | Msa1150790 | 0.808710 | 2.709458e-50 | -8.615850e-47 |
| Msa0244140 | Msa1150790 | 0.817440 | 3.294867e-52 | -8.615850e-47 |
| Msa0244190 | Msa1150790 | 0.816766 | 4.669683e-52 | -8.615850e-47 |
| Msa0256330 | Msa1150790 | 0.801548 | 8.548066e-49 | -8.615850e-47 |
| Msa0257500 | Msa1150790 | 0.803635 | 3.172762e-49 | -8.615850e-47 |
| Msa0258250 | Msa1150790 | -0.816358 | 5.763733e-52 | -8.615850e-47 |
| Msa0262370 | Msa1150790 | 0.824712 | 6.957907e-54 | -8.615850e-47 |
| Msa0269560 | Msa1150790 | 0.827217 | 1.766927e-54 | -8.615850e-47 |
| Msa0271550 | Msa1150790 | 0.801160 | 1.026433e-48 | -8.615850e-47 |
| Msa0278580 | Msa1150790 | 0.810269 | 1.253571e-50 | -8.615850e-47 |
| Msa0281930 | Msa1150790 | 0.803134 | 4.029087e-49 | -8.615850e-47 |
| Msa0282720 | Msa1150790 | 0.812628 | 3.851855e-51 | -8.615850e-47 |
| Msa0284450 | Msa1150790 | 0.817415 | 3.337508e-52 | -8.615850e-47 |
| Msa0295330 | Msa1150790 | 0.804889 | 1.739082e-49 | -8.615850e-47 |
| Msa0297810 | Msa1150790 | -0.805483 | 1.306424e-49 | -8.615850e-47 |
| Msa0299660 | Msa1150790 | 0.821308 | 4.326544e-53 | -8.615850e-47 |
| Msa0300150 | Msa1150790 | 0.819782 | 9.693525e-53 | -8.615850e-47 |
| Msa0310440 | Msa1150790 | 0.814669 | 1.369521e-51 | -8.615850e-47 |
| Msa0319290 | Msa1150790 | 0.816702 | 4.825971e-52 | -8.615850e-47 |
| Msa0321080 | Msa1150790 | 0.813786 | 2.145854e-51 | -8.615850e-47 |
| Msa0335820 | Msa1150790 | -0.804718 | 1.888566e-49 | -8.615850e-47 |
| Msa0357790 | Msa1150790 | 0.806700 | 7.243373e-50 | -8.615850e-47 |
| Msa0357830 | Msa1150790 | 0.812161 | 4.873944e-51 | -8.615850e-47 |
| Msa0357840 | Msa1150790 | 0.806804 | 6.886809e-50 | -8.615850e-47 |
| Msa1107200 | Msa1150790 | 0.807250 | 5.541384e-50 | -8.615850e-47 |
| Msa1109090 | Msa1150790 | 0.821904 | 3.150810e-53 | -8.615850e-47 |
| Msa1115280 | Msa1150790 | 0.843602 | 1.266687e-58 | -8.615850e-47 |
| Msa1122860 | Msa1150790 | 0.805695 | 1.179048e-49 | -8.615850e-47 |
| Msa1140230 | Msa1150790 | 0.806699 | 7.247511e-50 | -8.615850e-47 |
| Msa1143020 | Msa1150790 | 0.810391 | 1.179932e-50 | -8.615850e-47 |
| Msa1144040 | Msa1150790 | 0.825115 | 5.590251e-54 | -8.615850e-47 |
| Msa1150790 | Msa1150800 | 0.889645 | 2.012049e-73 | -8.615850e-47 |
| Msa1150790 | Msa1150810 | 0.891234 | 4.786097e-74 | -8.615850e-47 |
| Msa1150790 | Msa1152920 | 0.807472 | 4.971039e-50 | -8.615850e-47 |
| Msa1150790 | Msa1176720 | 0.828248 | 9.992052e-55 | -8.615850e-47 |
| Msa1150790 | Msa1181250 | 0.800996 | 1.108657e-48 | -8.615850e-47 |
| Msa1150790 | Msa1181330 | 0.800760 | 1.239017e-48 | -8.615850e-47 |
| Msa1150790 | Msa1200250 | 0.840711 | 7.375862e-58 | -8.615850e-47 |
| Msa1150790 | Msa1207310 | 0.819815 | 9.526481e-53 | -8.615850e-47 |
| Msa1150790 | Msa1208380 | 0.804803 | 1.812820e-49 | -8.615850e-47 |
| Msa1150790 | Msa1210110 | 0.809976 | 1.450110e-50 | -8.615850e-47 |
| Msa1150790 | Msa1218580 | 0.826541 | 2.563314e-54 | -8.615850e-47 |
| Msa1150790 | Msa1220880 | 0.810499 | 1.118249e-50 | -8.615850e-47 |
| Msa1150790 | Msa1221330 | 0.807968 | 3.900656e-50 | -8.615850e-47 |
| Msa1150790 | Msa1224200 | 0.800137 | 1.659727e-48 | -8.615850e-47 |
| Msa1150790 | Msa1225100 | 0.816887 | 4.387056e-52 | -8.615850e-47 |
| Msa1150790 | Msa1246700 | 0.820720 | 5.909694e-53 | -8.615850e-47 |
| Msa1150790 | Msa1266170 | 0.807508 | 4.884778e-50 | -8.615850e-47 |
| Msa1150790 | Msa1270660 | 0.826394 | 2.778841e-54 | -8.615850e-47 |
| Msa1150790 | Msa1270730 | 0.813116 | 3.012342e-51 | -8.615850e-47 |
| Msa1150790 | Msa1276340 | 0.837174 | 6.073687e-57 | -8.615850e-47 |
| Msa1150790 | Msa1279480 | 0.844698 | 6.436278e-59 | -8.615850e-47 |
| Msa1150790 | Msa1295330 | 0.804076 | 2.569483e-49 | -8.615850e-47 |
| Msa1150790 | Msa1307180 | 0.814842 | 1.253956e-51 | -8.615850e-47 |
| Msa1150790 | Msa1316360 | 0.828811 | 7.305965e-55 | -8.615850e-47 |
| Msa1150790 | Msa1329870 | 0.819269 | 1.269138e-52 | -8.615850e-47 |
| Msa1150790 | Msa1332050 | 0.811297 | 7.511686e-51 | -8.615850e-47 |
| Msa1150790 | Msa1335230 | 0.807939 | 3.955139e-50 | -8.615850e-47 |
| Msa1150790 | Msa1338400 | 0.827845 | 1.249101e-54 | -8.615850e-47 |
| Msa1150790 | Msa1355890 | 0.881882 | 1.658322e-70 | -8.615850e-47 |
| Msa1150790 | Msa1371940 | 0.800498 | 1.401150e-48 | -8.615850e-47 |
| Msa1150790 | Msa1372280 | 0.823728 | 1.184491e-53 | -8.615850e-47 |
| Msa1150790 | Msa1376450 | 0.801415 | 9.100545e-49 | -8.615850e-47 |
| Msa1150790 | Msa1380220 | 0.824795 | 6.651258e-54 | -8.615850e-47 |
| Msa1150790 | Msa1381480 | 0.817701 | 2.877327e-52 | -8.615850e-47 |
| Msa1150790 | Msa1388830 | 0.826432 | 2.721405e-54 | -8.615850e-47 |
| Msa1150790 | Msa1405220 | 0.818052 | 2.396852e-52 | -8.615850e-47 |
| Msa1150790 | Msa1420270 | 0.839973 | 1.150193e-57 | -8.615850e-47 |
| Msa1150790 | Msa1421210 | 0.802076 | 6.659698e-49 | -8.615850e-47 |
| Msa1150790 | Msa1422810 | 0.800181 | 1.625558e-48 | -8.615850e-47 |
| Msa1150790 | Msa1430130 | 0.834092 | 3.659315e-56 | -8.615850e-47 |
| Msa1150790 | Msa1430550 | 0.820247 | 7.586981e-53 | -8.615850e-47 |
| Msa1150790 | Msa1436600 | 0.828093 | 1.088707e-54 | -8.615850e-47 |
| Msa1150790 | Msa1457160 | 0.847890 | 8.682946e-60 | -8.615850e-47 |
| Msa1150790 | Msa1458510 | 0.811745 | 6.002482e-51 | -8.615850e-47 |
| Msa1150790 | Msa1460750 | 0.835517 | 1.602906e-56 | -8.615850e-47 |
| Msa1150790 | Msa1460800 | 0.802752 | 4.833700e-49 | -8.615850e-47 |
| Msa1150790 | Msa1462360 | 0.833282 | 5.832599e-56 | -8.615850e-47 |
| Msa0485490 | Msa1150790 | 0.814212 | 1.728710e-51 | -8.615850e-47 |
| Msa0518170 | Msa1150790 | 0.806340 | 8.625421e-50 | -8.615850e-47 |
| Msa0521670 | Msa1150790 | 0.801914 | 7.192443e-49 | -8.615850e-47 |
| Msa0534870 | Msa1150790 | 0.822295 | 2.557561e-53 | -8.615850e-47 |
| Msa0545290 | Msa1150790 | 0.836093 | 1.145370e-56 | -8.615850e-47 |
| Msa0587030 | Msa1150790 | 0.813916 | 2.009287e-51 | -8.615850e-47 |
| Msa0600890 | Msa1150790 | 0.832938 | 7.102574e-56 | -8.615850e-47 |
| Msa0602370 | Msa1150790 | 0.803982 | 2.687806e-49 | -8.615850e-47 |
| Msa0844110 | Msa1150790 | 0.810867 | 9.308281e-51 | -8.615850e-47 |
| Msa0853440 | Msa1150790 | 0.804149 | 2.480709e-49 | -8.615850e-47 |
| Msa0861470 | Msa1150790 | 0.821662 | 3.583244e-53 | -8.615850e-47 |
| Msa0861570 | Msa1150790 | 0.823547 | 1.306359e-53 | -8.615850e-47 |
| Msa0862280 | Msa1150790 | 0.818314 | 2.091345e-52 | -8.615850e-47 |
| Msa0870060 | Msa1150790 | 0.822651 | 2.113736e-53 | -8.615850e-47 |
| Msa0876360 | Msa1150790 | 0.805067 | 1.596336e-49 | -8.615850e-47 |
| Msa0880810 | Msa1150790 | 0.827930 | 1.191728e-54 | -8.615850e-47 |
| Msa0882400 | Msa1150790 | 0.812919 | 3.326963e-51 | -8.615850e-47 |
| Msa0888260 | Msa1150790 | 0.800637 | 1.312726e-48 | -8.615850e-47 |
| Msa0894710 | Msa1150790 | 0.809272 | 2.054173e-50 | -8.615850e-47 |
| Msa0898320 | Msa1150790 | 0.805396 | 1.362421e-49 | -8.615850e-47 |
| Msa0902830 | Msa1150790 | 0.813687 | 2.256440e-51 | -8.615850e-47 |
| Msa0921420 | Msa1150790 | 0.804285 | 2.324352e-49 | -8.615850e-47 |
| Msa0932100 | Msa1150790 | 0.858257 | 9.328139e-63 | -8.615850e-47 |
| Msa0932190 | Msa1150790 | 0.847884 | 8.715273e-60 | -8.615850e-47 |
| Msa0935770 | Msa1150790 | 0.829078 | 6.295944e-55 | -8.615850e-47 |
| Msa0960390 | Msa1150790 | 0.804518 | 2.078903e-49 | -8.615850e-47 |
| Msa0970230 | Msa1150790 | 0.858047 | 1.076696e-62 | -8.615850e-47 |
| Msa0970480 | Msa1150790 | 0.805893 | 1.071135e-49 | -8.615850e-47 |
| Msa0972810 | Msa1150790 | 0.839560 | 1.472762e-57 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1150790 | MtrunA17_Chr7g0240581 | 72.768 | 224 | 13 | 2 | 1 | 176 | 1 | 224 | 1.07e-108 | 309 |
| Msa1150790 | MtrunA17_Chr7g0240561 | 60.268 | 224 | 41 | 2 | 1 | 176 | 1 | 224 | 9.82e-89 | 259 |
| Msa1150790 | MtrunA17_Chr7g0240551 | 60.268 | 224 | 41 | 2 | 1 | 176 | 1 | 224 | 4.06e-87 | 254 |
| Msa1150790 | MtrunA17_Chr7g0240531 | 55.804 | 224 | 51 | 2 | 1 | 176 | 1 | 224 | 7.13e-80 | 236 |
| Msa1150790 | MtrunA17_Chr7g0240511 | 57.143 | 224 | 43 | 3 | 1 | 176 | 1 | 219 | 6.24e-78 | 231 |
| Msa1150790 | MtrunA17_Chr7g0240541 | 55.357 | 224 | 52 | 2 | 1 | 176 | 1 | 224 | 1.13e-77 | 231 |
| Msa1150790 | MtrunA17_Chr7g0240521 | 59.906 | 212 | 47 | 2 | 1 | 174 | 8 | 219 | 9.76e-73 | 218 |
| Msa1150790 | MtrunA17_Chr7g0240631 | 51.570 | 223 | 60 | 2 | 1 | 175 | 1 | 223 | 1.47e-72 | 218 |
| Msa1150790 | MtrunA17_Chr7g0240681 | 52.000 | 225 | 59 | 3 | 1 | 176 | 1 | 225 | 1.20e-69 | 210 |
| Msa1150790 | MtrunA17_Chr7g0240641 | 50.224 | 223 | 63 | 2 | 1 | 175 | 1 | 223 | 5.36e-69 | 209 |
| Msa1150790 | MtrunA17_Chr7g0240691 | 49.315 | 219 | 62 | 4 | 6 | 175 | 36 | 254 | 2.62e-64 | 198 |
| Msa1150790 | MtrunA17_Chr7g0240611 | 49.776 | 223 | 60 | 3 | 1 | 175 | 1 | 219 | 5.57e-64 | 196 |
| Msa1150790 | MtrunA17_Chr4g0008791 | 49.751 | 201 | 65 | 1 | 1 | 165 | 1 | 201 | 5.01e-63 | 194 |
| Msa1150790 | MtrunA17_Chr7g0240671 | 50.000 | 194 | 57 | 2 | 8 | 165 | 5 | 194 | 1.59e-57 | 179 |
| Msa1150790 | MtrunA17_Chr4g0008781 | 49.000 | 200 | 64 | 3 | 3 | 165 | 4 | 202 | 7.20e-57 | 178 |
| Msa1150790 | MtrunA17_Chr7g0240651 | 52.736 | 201 | 55 | 2 | 1 | 165 | 1 | 197 | 1.87e-52 | 166 |
| Msa1150790 | MtrunA17_Chr7g0240661 | 50.746 | 201 | 59 | 2 | 1 | 165 | 1 | 197 | 3.70e-50 | 161 |
| Msa1150790 | MtrunA17_Chr1g0196771 | 35.122 | 205 | 96 | 3 | 6 | 173 | 2 | 206 | 3.10e-34 | 120 |
| Msa1150790 | MtrunA17_Chr1g0212301 | 36.041 | 197 | 87 | 3 | 7 | 164 | 3 | 199 | 4.46e-32 | 114 |
| Msa1150790 | MtrunA17_Chr6g0483141 | 36.598 | 194 | 87 | 3 | 8 | 165 | 4 | 197 | 5.36e-31 | 112 |
| Msa1150790 | MtrunA17_Chr3g0132581 | 38.579 | 197 | 85 | 3 | 5 | 165 | 3 | 199 | 6.50e-31 | 111 |
| Msa1150790 | MtrunA17_Chr8g0379561 | 36.816 | 201 | 90 | 4 | 1 | 165 | 1 | 200 | 7.68e-30 | 108 |
| Msa1150790 | MtrunA17_Chr5g0417011 | 32.850 | 207 | 97 | 3 | 1 | 165 | 1 | 207 | 7.95e-28 | 103 |
| Msa1150790 | MtrunA17_Chr8g0363751 | 35.294 | 204 | 88 | 5 | 5 | 164 | 3 | 206 | 1.00e-26 | 101 |
| Msa1150790 | MtrunA17_Chr8g0379581 | 34.694 | 196 | 92 | 3 | 6 | 165 | 4 | 199 | 1.77e-26 | 100 |
| Msa1150790 | MtrunA17_Chr5g0415411 | 33.173 | 208 | 93 | 4 | 1 | 164 | 1 | 206 | 6.93e-26 | 99.0 |
| Msa1150790 | MtrunA17_Chr1g0196661 | 33.503 | 197 | 91 | 5 | 8 | 165 | 4 | 199 | 2.64e-25 | 97.4 |
| Msa1150790 | MtrunA17_Chr1g0196721 | 34.694 | 196 | 88 | 5 | 8 | 164 | 3 | 197 | 4.08e-25 | 96.7 |
| Msa1150790 | MtrunA17_Chr1g0196691 | 32.323 | 198 | 93 | 5 | 8 | 165 | 29 | 225 | 1.56e-24 | 95.9 |
| Msa1150790 | MtrunA17_Chr1g0196711 | 31.980 | 197 | 94 | 4 | 8 | 165 | 4 | 199 | 3.63e-23 | 91.7 |
| Msa1150790 | MtrunA17_Chr4g0029341 | 30.102 | 196 | 99 | 3 | 6 | 163 | 3 | 198 | 8.09e-22 | 88.2 |
| Msa1150790 | MtrunA17_Chr2g0312781 | 32.812 | 192 | 90 | 4 | 1 | 155 | 15 | 204 | 1.91e-20 | 84.7 |
| Msa1150790 | MtrunA17_Chr2g0312751 | 33.155 | 187 | 86 | 4 | 6 | 155 | 3 | 187 | 9.87e-20 | 82.4 |
| Msa1150790 | MtrunA17_Chr2g0312771 | 32.620 | 187 | 87 | 4 | 6 | 155 | 3 | 187 | 3.44e-19 | 81.3 |
| Msa1150790 | MtrunA17_Chr2g0312731 | 31.720 | 186 | 88 | 5 | 6 | 154 | 3 | 186 | 2.52e-18 | 79.0 |
| Msa1150790 | MtrunA17_Chr3g0107731 | 32.796 | 186 | 86 | 4 | 7 | 155 | 9 | 192 | 1.45e-17 | 77.0 |
| Msa1150790 | MtrunA17_Chr3g0107741 | 32.275 | 189 | 89 | 5 | 4 | 155 | 6 | 192 | 3.69e-17 | 75.9 |
| Msa1150790 | MtrunA17_Chr2g0312791 | 30.481 | 187 | 90 | 4 | 6 | 154 | 3 | 187 | 5.05e-17 | 75.5 |
| Msa1150790 | MtrunA17_Chr5g0433801 | 32.979 | 188 | 87 | 5 | 3 | 153 | 2 | 187 | 9.33e-17 | 74.7 |
| Msa1150790 | MtrunA17_Chr8g0391631 | 35.484 | 155 | 56 | 5 | 7 | 117 | 21 | 175 | 1.03e-15 | 70.9 |
| Msa1150790 | MtrunA17_Chr8g0357211 | 30.047 | 213 | 105 | 5 | 6 | 176 | 3 | 213 | 1.58e-15 | 71.2 |
| Msa1150790 | MtrunA17_Chr8g0357241 | 31.383 | 188 | 90 | 4 | 6 | 156 | 3 | 188 | 2.60e-15 | 70.9 |
| Msa1150790 | MtrunA17_Chr2g0312811 | 29.630 | 189 | 92 | 4 | 6 | 155 | 3 | 189 | 1.82e-14 | 68.6 |
| Msa1150790 | MtrunA17_Chr4g0069471 | 32.203 | 177 | 82 | 4 | 3 | 141 | 21 | 197 | 3.50e-14 | 67.4 |
| Msa1150790 | MtrunA17_Chr2g0312691 | 30.270 | 185 | 90 | 6 | 8 | 155 | 5 | 187 | 3.36e-13 | 65.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1150790 | AT3G09270.1 | 42.289 | 201 | 78 | 4 | 3 | 165 | 2 | 202 | 1.42e-43 | 144 |
| Msa1150790 | AT2G29420.1 | 38.889 | 198 | 85 | 3 | 3 | 164 | 5 | 202 | 2.56e-39 | 134 |
| Msa1150790 | AT2G29490.1 | 39.175 | 194 | 81 | 4 | 1 | 157 | 1 | 194 | 2.57e-30 | 110 |
| Msa1150790 | AT1G10370.1 | 36.715 | 207 | 86 | 5 | 1 | 164 | 1 | 205 | 4.44e-28 | 104 |
| Msa1150790 | AT2G29440.1 | 36.139 | 202 | 91 | 5 | 1 | 165 | 1 | 201 | 9.12e-28 | 103 |
| Msa1150790 | AT2G29450.1 | 36.318 | 201 | 90 | 4 | 3 | 165 | 2 | 202 | 3.19e-27 | 102 |
| Msa1150790 | AT2G29470.1 | 35.961 | 203 | 92 | 5 | 1 | 165 | 1 | 203 | 1.50e-26 | 100 |
| Msa1150790 | AT2G29460.1 | 35.644 | 202 | 93 | 4 | 1 | 165 | 1 | 202 | 2.77e-26 | 100 |
| Msa1150790 | AT2G29480.1 | 35.149 | 202 | 94 | 4 | 1 | 165 | 1 | 202 | 3.74e-26 | 99.8 |
| Msa1150790 | AT1G10360.1 | 33.663 | 202 | 91 | 4 | 6 | 164 | 4 | 205 | 1.68e-25 | 98.2 |
| Msa1150790 | AT1G69930.1 | 30.732 | 205 | 100 | 3 | 2 | 164 | 7 | 211 | 4.13e-24 | 94.7 |
| Msa1150790 | AT1G59700.1 | 35.749 | 207 | 89 | 4 | 5 | 167 | 4 | 210 | 9.64e-24 | 94.0 |
| Msa1150790 | AT1G27130.1 | 32.057 | 209 | 95 | 6 | 1 | 164 | 1 | 207 | 3.50e-22 | 89.7 |
| Msa1150790 | AT1G59670.1 | 33.171 | 205 | 93 | 5 | 5 | 165 | 4 | 208 | 8.40e-22 | 88.6 |
| Msa1150790 | AT5G62480.2 | 32.796 | 186 | 105 | 3 | 8 | 173 | 9 | 194 | 2.53e-21 | 87.0 |
| Msa1150790 | AT1G69920.1 | 32.075 | 212 | 94 | 6 | 1 | 164 | 26 | 235 | 3.98e-21 | 87.4 |
| Msa1150790 | AT5G62480.3 | 32.804 | 189 | 106 | 4 | 5 | 173 | 6 | 193 | 7.52e-21 | 85.9 |
| Msa1150790 | AT1G53680.1 | 31.443 | 194 | 92 | 3 | 1 | 155 | 1 | 192 | 9.04e-21 | 85.9 |
| Msa1150790 | AT5G62480.1 | 31.163 | 215 | 102 | 4 | 5 | 173 | 6 | 220 | 1.36e-20 | 85.5 |
| Msa1150790 | AT1G78320.2 | 36.145 | 166 | 84 | 5 | 5 | 155 | 2 | 160 | 5.49e-20 | 83.2 |
| Msa1150790 | AT1G27140.1 | 30.622 | 209 | 99 | 5 | 1 | 164 | 1 | 208 | 3.34e-19 | 82.0 |
| Msa1150790 | AT1G78370.1 | 31.694 | 183 | 86 | 4 | 10 | 155 | 7 | 187 | 8.00e-18 | 77.8 |
| Msa1150790 | AT1G78380.1 | 31.694 | 183 | 86 | 4 | 8 | 153 | 5 | 185 | 2.03e-17 | 76.6 |
| Msa1150790 | AT1G74590.1 | 26.699 | 206 | 110 | 3 | 1 | 165 | 1 | 206 | 2.89e-17 | 76.6 |
| Msa1150790 | AT1G78340.1 | 32.370 | 173 | 80 | 3 | 6 | 141 | 3 | 175 | 3.90e-17 | 75.9 |
| Msa1150790 | AT1G17170.1 | 31.183 | 186 | 90 | 4 | 6 | 155 | 3 | 186 | 1.46e-15 | 72.0 |
Find 41 sgRNAs with CRISPR-Local
Find 190 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGTTAAGGTGTTACATAATT+AGG | 0.074022 | 7_4:-34591929 | Msa1150790:three_prime_UTR |
| TTACATAATTAGGGAATTTA+AGG | 0.190282 | 7_4:-34591919 | Msa1150790:three_prime_UTR |
| GTTAAGGTGTTACATAATTA+GGG | 0.277277 | 7_4:-34591928 | Msa1150790:three_prime_UTR |
| ACAGGAACTTTCTTATAAAC+AGG | 0.283283 | 7_4:+34594739 | None:intergenic |
| AATCACAAGGGATTCTGATA+TGG | 0.318787 | 7_4:+34594696 | None:intergenic |
| GAGCTCAAAGGAAAATTCTT+TGG | 0.320303 | 7_4:-34592152 | Msa1150790:CDS |
| GGAATTTAAGGAGAATTGTT+TGG | 0.355096 | 7_4:-34591907 | Msa1150790:three_prime_UTR |
| TTCTTTGGTGGAGAGGAGAT+TGG | 0.373411 | 7_4:-34592137 | Msa1150790:CDS |
| TTGACTCCATTTGTAAAGCT+TGG | 0.384299 | 7_4:+34592022 | None:intergenic |
| CACCAACCATCCAGTTGTTA+AGG | 0.388600 | 7_4:-34591994 | Msa1150790:CDS |
| CGCTAAGATGGCATCAAATC+AGG | 0.389304 | 7_4:-34594899 | None:intergenic |
| TGACTCCATTTGTAAAGCTT+GGG | 0.390868 | 7_4:+34592023 | None:intergenic |
| CTTCAAAATAGATTAAGTTA+AGG | 0.407890 | 7_4:-34591944 | Msa1150790:exon |
| CGAGCTTTATCCTTAACAAC+TGG | 0.421334 | 7_4:+34591984 | None:intergenic |
| TCTCATTGTTTAAGAAGTCT+AGG | 0.442633 | 7_4:-34591813 | Msa1150790:three_prime_UTR |
| GTTTGTTGCTTCTTGTACGA+TGG | 0.459262 | 7_4:+34592073 | None:intergenic |
| GGAGATTGCTCTAACATTGA+AGG | 0.460355 | 7_4:-34594827 | Msa1150790:CDS |
| AATTTCCCAAGCTTTACAAA+TGG | 0.474830 | 7_4:-34592028 | Msa1150790:CDS |
| ATCCTTAACAACTGGATGGT+TGG | 0.486493 | 7_4:+34591992 | None:intergenic |
| ATCACAAGGGATTCTGATAT+GGG | 0.494154 | 7_4:+34594697 | None:intergenic |
| TTTGTTGCTTCTTGTACGAT+GGG | 0.494757 | 7_4:+34592074 | None:intergenic |
| ATCTCCACCCTACTCACAAA+TGG | 0.497901 | 7_4:+34594844 | None:intergenic |
| CAATATCAGTTAGAAAAGGC+AGG | 0.504225 | 7_4:-34594793 | Msa1150790:CDS |
| ATATCATTATGAACTAATAC+AGG | 0.508270 | 7_4:+34594721 | None:intergenic |
| CTCAAAGGAAAATTCTTTGG+TGG | 0.514503 | 7_4:-34592149 | Msa1150790:CDS |
| TCGATTTAATTATAAAGTGA+TGG | 0.520862 | 7_4:+34591725 | None:intergenic |
| GGCAAGTCCATTTGTGAGTA+GGG | 0.523330 | 7_4:-34594851 | Msa1150790:CDS |
| AGGAAAATTCTTTGGTGGAG+AGG | 0.523741 | 7_4:-34592144 | Msa1150790:CDS |
| AGAACGTGAGAAAGCTATTG+AGG | 0.524222 | 7_4:-34592207 | Msa1150790:CDS |
| CTTTATCCTTAACAACTGGA+TGG | 0.536738 | 7_4:+34591988 | None:intergenic |
| ATACCAATATCAGTTAGAAA+AGG | 0.539142 | 7_4:-34594797 | Msa1150790:CDS |
| CAGGAACTTTCTTATAAACA+GGG | 0.564477 | 7_4:+34594740 | None:intergenic |
| AATATCAGTTAGAAAAGGCA+GGG | 0.582241 | 7_4:-34594792 | Msa1150790:CDS |
| AAGTTAGATATATGCAGACT+AGG | 0.587839 | 7_4:-34591839 | Msa1150790:three_prime_UTR |
| ATTCTTGAGAATGAGCTCAA+AGG | 0.591101 | 7_4:-34592164 | Msa1150790:CDS |
| GAGATTGCTCTAACATTGAA+GGG | 0.597295 | 7_4:-34594826 | Msa1150790:CDS |
| ACCAGTGTTTAAGTGCTGCA+CGG | 0.603673 | 7_4:-34592256 | Msa1150790:intron |
| TGGCAAGTCCATTTGTGAGT+AGG | 0.615908 | 7_4:-34594852 | Msa1150790:CDS |
| TAATTAAAATAGTGTAAACA+AGG | 0.616902 | 7_4:+34591783 | None:intergenic |
| TTGTTGCTTCTTGTACGATG+GGG | 0.658880 | 7_4:+34592075 | None:intergenic |
| AAGTCCATTTGTGAGTAGGG+TGG | 0.696953 | 7_4:-34594848 | Msa1150790:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | GTTTAAAAAAAAATTATATG+TGG | + | chr7_4:34592394-34592413 | None:intergenic | 10.0% |
| !!! | TTTTATTAATAATAATTGTG+TGG | - | chr7_4:34593300-34593319 | Msa1150790:intron | 10.0% |
| !!! | TTATTATTATTTATCTCTTT+TGG | - | chr7_4:34593387-34593406 | Msa1150790:intron | 10.0% |
| !!! | TATTATTATTTATCTCTTTT+GGG | - | chr7_4:34593388-34593407 | Msa1150790:intron | 10.0% |
| !! | TAGCTAAATATATATTATTA+GGG | - | chr7_4:34593516-34593535 | Msa1150790:intron | 10.0% |
| !!! | TAGTTTTCATTTTTAAATTA+CGG | - | chr7_4:34593724-34593743 | Msa1150790:intron | 10.0% |
| !!! | TTGATTTCTTTTTAAAATTA+CGG | - | chr7_4:34593818-34593837 | Msa1150790:intron | 10.0% |
| !! | GTTACATTAATTATATTTGT+AGG | + | chr7_4:34593019-34593038 | None:intergenic | 15.0% |
| !! | GTAGCTAAATATATATTATT+AGG | - | chr7_4:34593515-34593534 | Msa1150790:intron | 15.0% |
| !! | AGCTAAATATATATTATTAG+GGG | - | chr7_4:34593517-34593536 | Msa1150790:intron | 15.0% |
| !! | TATATACATTTACAAATACA+GGG | + | chr7_4:34593633-34593652 | None:intergenic | 15.0% |
| !! | TTATATACATTTACAAATAC+AGG | + | chr7_4:34593634-34593653 | None:intergenic | 15.0% |
| !! | AATAAATATGATATTTGAAG+TGG | + | chr7_4:34594050-34594069 | None:intergenic | 15.0% |
| !! | TAATTAAAATAGTGTAAACA+AGG | + | chr7_4:34594823-34594842 | None:intergenic | 15.0% |
| !! | ATATCATTATGAACTAATAC+AGG | + | chr7_4:34591885-34591904 | None:intergenic | 20.0% |
| !! | GCAAAAAATTAGTAGAATAT+GGG | + | chr7_4:34592869-34592888 | None:intergenic | 20.0% |
| !! | TGCAAAAAATTAGTAGAATA+TGG | + | chr7_4:34592870-34592889 | None:intergenic | 20.0% |
| !! | AATAAAAAAACAAGGTAAAG+TGG | + | chr7_4:34593287-34593306 | None:intergenic | 20.0% |
| !! | CAGTAAAATAATACAAAAGT+GGG | + | chr7_4:34593349-34593368 | None:intergenic | 20.0% |
| !! | ACAGTAAAATAATACAAAAG+TGG | + | chr7_4:34593350-34593369 | None:intergenic | 20.0% |
| !! | ATTATTTAATCGTGTCATAT+AGG | + | chr7_4:34593430-34593449 | None:intergenic | 20.0% |
| !! | AGTTCACTTAAAATAAAACT+TGG | - | chr7_4:34593491-34593510 | Msa1150790:intron | 20.0% |
| !! | GTTCACTTAAAATAAAACTT+GGG | - | chr7_4:34593492-34593511 | Msa1150790:intron | 20.0% |
| !! | TTCACTTAAAATAAAACTTG+GGG | - | chr7_4:34593493-34593512 | Msa1150790:intron | 20.0% |
| !!! | AAATATTTTTTTGAGTGAGT+AGG | + | chr7_4:34593563-34593582 | None:intergenic | 20.0% |
| !! | ATATACATTTACAAATACAG+GGG | + | chr7_4:34593632-34593651 | None:intergenic | 20.0% |
| !! | ATGACTATTATATATGTTTG+TGG | - | chr7_4:34594088-34594107 | Msa1150790:intron | 20.0% |
| !! | AATATTCAAGAAGAATAATC+TGG | - | chr7_4:34594213-34594232 | Msa1150790:intron | 20.0% |
| !!! | ACACTGGTTTAAAAAAATTA+AGG | + | chr7_4:34594335-34594354 | None:intergenic | 20.0% |
| !! | CTTCAAAATAGATTAAGTTA+AGG | - | chr7_4:34594659-34594678 | Msa1150790:intron | 20.0% |
| !! | TTACATAATTAGGGAATTTA+AGG | - | chr7_4:34594684-34594703 | Msa1150790:intron | 20.0% |
| !! | TCGATTTAATTATAAAGTGA+TGG | + | chr7_4:34594881-34594900 | None:intergenic | 20.0% |
| ! | ATACCAATATCAGTTAGAAA+AGG | - | chr7_4:34591806-34591825 | Msa1150790:three_prime_UTR | 25.0% |
| ! | TAAAATATTTCACAAGCATG+TGG | - | chr7_4:34592245-34592264 | Msa1150790:CDS | 25.0% |
| !! | GTATTATGTTTTTCTCTATG+CGG | + | chr7_4:34592322-34592341 | None:intergenic | 25.0% |
| ! | AGAGAAAAACATAATACATG+TGG | - | chr7_4:34592325-34592344 | Msa1150790:intron | 25.0% |
| ! | TTAAACTAATCTAATGCAGT+AGG | - | chr7_4:34592408-34592427 | Msa1150790:intron | 25.0% |
| ! | ACGTATTATACCAAAAAATG+TGG | - | chr7_4:34592495-34592514 | Msa1150790:intron | 25.0% |
| !!! | TAGTTTATTGCCACATTTTT+TGG | + | chr7_4:34592508-34592527 | None:intergenic | 25.0% |
| !!! | TTCTTTTGTTGTAGCTTTTT+TGG | + | chr7_4:34592570-34592589 | None:intergenic | 25.0% |
| ! | TTTATGAAAATTGAACTCGA+CGG | - | chr7_4:34592610-34592629 | Msa1150790:intron | 25.0% |
| !! | TGATTTTCTTTCAAATAGCT+TGG | + | chr7_4:34592712-34592731 | None:intergenic | 25.0% |
| !!! | GTTATATTTTGAAAAGACTG+AGG | - | chr7_4:34592906-34592925 | Msa1150790:intron | 25.0% |
| ! | TTGCAATTAAGTCATTAGAT+TGG | + | chr7_4:34592939-34592958 | None:intergenic | 25.0% |
| !! | TCAACATTGATAATATTTGC+AGG | + | chr7_4:34593109-34593128 | None:intergenic | 25.0% |
| ! | TCTAAGTTTAAATACAGCTT+TGG | + | chr7_4:34593156-34593175 | None:intergenic | 25.0% |
| !! | AGTTAAGGTGTTACATAATT+AGG | - | chr7_4:34594674-34594693 | Msa1150790:intron | 25.0% |
| !! | GTTAAGGTGTTACATAATTA+GGG | - | chr7_4:34594675-34594694 | Msa1150790:intron | 25.0% |
| !!! | ATGTTATTTTCATGGGAATA+AGG | + | chr7_4:34594857-34594876 | None:intergenic | 25.0% |
| AATATCAGTTAGAAAAGGCA+GGG | - | chr7_4:34591811-34591830 | Msa1150790:three_prime_UTR | 30.0% | |
| CAGGAACTTTCTTATAAACA+GGG | + | chr7_4:34591866-34591885 | None:intergenic | 30.0% | |
| ACAGGAACTTTCTTATAAAC+AGG | + | chr7_4:34591867-34591886 | None:intergenic | 30.0% | |
| !! | CAATATTGGATTTTGTTTCC+AGG | + | chr7_4:34591952-34591971 | None:intergenic | 30.0% |
| TACCTTATCATCTATGAACT+TGG | + | chr7_4:34592015-34592034 | None:intergenic | 30.0% | |
| !! | TCAGCTTTAAAGTGTATAAG+TGG | - | chr7_4:34592110-34592129 | Msa1150790:CDS | 30.0% |
| !! | CAGCTTTAAAGTGTATAAGT+GGG | - | chr7_4:34592111-34592130 | Msa1150790:CDS | 30.0% |
| !! | AGCTTTAAAGTGTATAAGTG+GGG | - | chr7_4:34592112-34592131 | Msa1150790:CDS | 30.0% |
| ACACTGTATACTATATGTAG+GGG | + | chr7_4:34592159-34592178 | None:intergenic | 30.0% | |
| GACACTGTATACTATATGTA+GGG | + | chr7_4:34592160-34592179 | None:intergenic | 30.0% | |
| ACATGTGGATATTTGTACAA+CGG | - | chr7_4:34592340-34592359 | Msa1150790:intron | 30.0% | |
| !!! | CTATTCTAATGTGGCTTTTT+TGG | + | chr7_4:34592538-34592557 | None:intergenic | 30.0% |
| AAAAAGCCACATTAGAATAG+CGG | - | chr7_4:34592538-34592557 | Msa1150790:intron | 30.0% | |
| GATGAATTTGAGTCTTTGAA+GGG | + | chr7_4:34592636-34592655 | None:intergenic | 30.0% | |
| CTTGGTTATCTACATTGAAA+AGG | + | chr7_4:34592694-34592713 | None:intergenic | 30.0% | |
| AGCAAGAAAGAATTCATTTG+AGG | + | chr7_4:34592962-34592981 | None:intergenic | 30.0% | |
| AATTCCTTGTAATTGTTGCT+AGG | - | chr7_4:34593128-34593147 | Msa1150790:intron | 30.0% | |
| TAATAATAATTGTGTGGACG+TGG | - | chr7_4:34593306-34593325 | Msa1150790:intron | 30.0% | |
| !!! | ATTTTTTTTTTGGGGTAGCA+AGG | - | chr7_4:34593579-34593598 | Msa1150790:intron | 30.0% |
| !!! | TTTTTTTTTTGGGGTAGCAA+GGG | - | chr7_4:34593580-34593599 | Msa1150790:intron | 30.0% |
| ! | TGAGATATAATGACTTGTGA+CGG | + | chr7_4:34594170-34594189 | None:intergenic | 30.0% |
| AATTTCCCAAGCTTTACAAA+TGG | - | chr7_4:34594575-34594594 | Msa1150790:intron | 30.0% | |
| GGAATTTAAGGAGAATTGTT+TGG | - | chr7_4:34594696-34594715 | Msa1150790:intron | 30.0% | |
| AAGTTAGATATATGCAGACT+AGG | - | chr7_4:34594764-34594783 | Msa1150790:CDS | 30.0% | |
| TCTCATTGTTTAAGAAGTCT+AGG | - | chr7_4:34594790-34594809 | Msa1150790:CDS | 30.0% | |
| !!! | TGATGGCATGTTATTTTCAT+GGG | + | chr7_4:34594864-34594883 | None:intergenic | 30.0% |
| ! | CAGGAAAATGTGAAGCTTTT+TGG | - | chr7_4:34591723-34591742 | Msa1150790:three_prime_UTR | 35.0% |
| !!! | TGTGAAGCTTTTTGGAATGA+TGG | - | chr7_4:34591731-34591750 | Msa1150790:three_prime_UTR | 35.0% |
| GAGATTGCTCTAACATTGAA+GGG | - | chr7_4:34591777-34591796 | Msa1150790:three_prime_UTR | 35.0% | |
| ! | CTGCCTTTTCTAACTGATAT+TGG | + | chr7_4:34591812-34591831 | None:intergenic | 35.0% |
| CAATATCAGTTAGAAAAGGC+AGG | - | chr7_4:34591810-34591829 | Msa1150790:three_prime_UTR | 35.0% | |
| ATCACAAGGGATTCTGATAT+GGG | + | chr7_4:34591909-34591928 | None:intergenic | 35.0% | |
| AATCACAAGGGATTCTGATA+TGG | + | chr7_4:34591910-34591929 | None:intergenic | 35.0% | |
| GACATACTCAAGAATCACAA+GGG | + | chr7_4:34591922-34591941 | None:intergenic | 35.0% | |
| TAAGGATCAGAAGGCAATAT+TGG | + | chr7_4:34591966-34591985 | None:intergenic | 35.0% | |
| GACCAAGTTCATAGATGATA+AGG | - | chr7_4:34592010-34592029 | Msa1150790:CDS | 35.0% | |
| TGTATACTATATGTAGGGGT+CGG | + | chr7_4:34592155-34592174 | None:intergenic | 35.0% | |
| GGACACTGTATACTATATGT+AGG | + | chr7_4:34592161-34592180 | None:intergenic | 35.0% | |
| GAAATACGTTCATGTGATCT+CGG | + | chr7_4:34592196-34592215 | None:intergenic | 35.0% | |
| ! | TCTTTATTTGTGCACATGTG+TGG | - | chr7_4:34592221-34592240 | Msa1150790:CDS | 35.0% |
| ATATTTCACAAGCATGTGGA+TGG | - | chr7_4:34592249-34592268 | Msa1150790:CDS | 35.0% | |
| AAGCTAGCGATAATTCTATG+AGG | - | chr7_4:34592365-34592384 | Msa1150790:intron | 35.0% | |
| TACAATCCGCTATTCTAATG+TGG | + | chr7_4:34592547-34592566 | None:intergenic | 35.0% | |
| GGATGAATTTGAGTCTTTGA+AGG | + | chr7_4:34592637-34592656 | None:intergenic | 35.0% | |
| ! | GTTTAGCTCAGATGCAATTA+TGG | + | chr7_4:34592658-34592677 | None:intergenic | 35.0% |
| GAGATTCAATGAACAAACTG+TGG | + | chr7_4:34593183-34593202 | None:intergenic | 35.0% | |
| GGTTGTGATAGATGAAATGA+AGG | + | chr7_4:34593216-34593235 | None:intergenic | 35.0% | |
| !! | TCTTTTGGGTGTTAATCTTC+CGG | - | chr7_4:34593402-34593421 | Msa1150790:intron | 35.0% |
| TAATCGTGTCATATAGGAAC+CGG | + | chr7_4:34593424-34593443 | None:intergenic | 35.0% | |
| AAATACCACAAACCTCACTA+AGG | - | chr7_4:34593656-34593675 | Msa1150790:intron | 35.0% | |
| AATACCACAAACCTCACTAA+GGG | - | chr7_4:34593657-34593676 | Msa1150790:intron | 35.0% | |
| TTTGGATTGAGGGTTTAAGA+GGG | + | chr7_4:34593986-34594005 | None:intergenic | 35.0% | |
| ATACGCTAGAGAGACATTTA+GGG | + | chr7_4:34594013-34594032 | None:intergenic | 35.0% | |
| TATACGCTAGAGAGACATTT+AGG | + | chr7_4:34594014-34594033 | None:intergenic | 35.0% | |
| ! | ATTTGAAGTGGTTCTCAATG+TGG | + | chr7_4:34594038-34594057 | None:intergenic | 35.0% |
| CTCATAGTCATTCATGTTCT+TGG | - | chr7_4:34594114-34594133 | Msa1150790:intron | 35.0% | |
| !! | TATAATGACTTGTGACGGAT+TGG | + | chr7_4:34594165-34594184 | None:intergenic | 35.0% |
| ATTCTTGAGAATGAGCTCAA+AGG | - | chr7_4:34594439-34594458 | Msa1150790:intron | 35.0% | |
| GAGCTCAAAGGAAAATTCTT+TGG | - | chr7_4:34594451-34594470 | Msa1150790:intron | 35.0% | |
| CTCAAAGGAAAATTCTTTGG+TGG | - | chr7_4:34594454-34594473 | Msa1150790:intron | 35.0% | |
| ! | TTTGTTGCTTCTTGTACGAT+GGG | + | chr7_4:34594532-34594551 | None:intergenic | 35.0% |
| TGACTCCATTTGTAAAGCTT+GGG | + | chr7_4:34594583-34594602 | None:intergenic | 35.0% | |
| TTGACTCCATTTGTAAAGCT+TGG | + | chr7_4:34594584-34594603 | None:intergenic | 35.0% | |
| CTTTATCCTTAACAACTGGA+TGG | + | chr7_4:34594618-34594637 | None:intergenic | 35.0% | |
| !!! | GTGATGGCATGTTATTTTCA+TGG | + | chr7_4:34594865-34594884 | None:intergenic | 35.0% |
| GGAGATTGCTCTAACATTGA+AGG | - | chr7_4:34591776-34591795 | Msa1150790:three_prime_UTR | 40.0% | |
| CGACATACTCAAGAATCACA+AGG | + | chr7_4:34591923-34591942 | None:intergenic | 40.0% | |
| ! | GCTCTTTTGTAAGGATCAGA+AGG | + | chr7_4:34591975-34591994 | None:intergenic | 40.0% |
| TGATCCTTACAAAAGAGCCT+TGG | - | chr7_4:34591977-34591996 | Msa1150790:CDS | 40.0% | |
| CTAGCGATAATTCTATGAGG+TGG | - | chr7_4:34592368-34592387 | Msa1150790:intron | 40.0% | |
| GGATCCTAGCAACAATTACA+AGG | + | chr7_4:34593135-34593154 | None:intergenic | 40.0% | |
| TCACAACACAACACACAACA+CGG | + | chr7_4:34593247-34593266 | None:intergenic | 40.0% | |
| TAATAATTGTGTGGACGTGG+TGG | - | chr7_4:34593309-34593328 | Msa1150790:intron | 40.0% | |
| AATAATTGTGTGGACGTGGT+GGG | - | chr7_4:34593310-34593329 | Msa1150790:intron | 40.0% | |
| TTTACAAATACAGGGGCGAA+TGG | + | chr7_4:34593625-34593644 | None:intergenic | 40.0% | |
| TGTGTTTGGATGGAGGATTT+AGG | - | chr7_4:34593680-34593699 | Msa1150790:intron | 40.0% | |
| TTTGGATGGAGGATTTAGGA+GGG | - | chr7_4:34593684-34593703 | Msa1150790:intron | 40.0% | |
| TTGGATTGAGGGTTTAAGAG+GGG | + | chr7_4:34593985-34594004 | None:intergenic | 40.0% | |
| GTTTGGATTGAGGGTTTAAG+AGG | + | chr7_4:34593987-34594006 | None:intergenic | 40.0% | |
| TTAGGGTGTGTTTGGATTGA+GGG | + | chr7_4:34593996-34594015 | None:intergenic | 40.0% | |
| ! | TTTAGGGTGTGTTTGGATTG+AGG | + | chr7_4:34593997-34594016 | None:intergenic | 40.0% |
| ! | AGAGACATTTAGGGTGTGTT+TGG | + | chr7_4:34594004-34594023 | None:intergenic | 40.0% |
| AGAACGTGAGAAAGCTATTG+AGG | - | chr7_4:34594396-34594415 | Msa1150790:intron | 40.0% | |
| AGGAAAATTCTTTGGTGGAG+AGG | - | chr7_4:34594459-34594478 | Msa1150790:intron | 40.0% | |
| ! | CTGCAGTCTTCATAGCTTTT+TGG | - | chr7_4:34594503-34594522 | Msa1150790:intron | 40.0% |
| ! | TTGTTGCTTCTTGTACGATG+GGG | + | chr7_4:34594531-34594550 | None:intergenic | 40.0% |
| ! | GTTTGTTGCTTCTTGTACGA+TGG | + | chr7_4:34594533-34594552 | None:intergenic | 40.0% |
| ATCCTTAACAACTGGATGGT+TGG | + | chr7_4:34594614-34594633 | None:intergenic | 40.0% | |
| ! | CGAGCTTTATCCTTAACAAC+TGG | + | chr7_4:34594622-34594641 | None:intergenic | 40.0% |
| TGGCAAGTCCATTTGTGAGT+AGG | - | chr7_4:34591751-34591770 | Msa1150790:three_prime_UTR | 45.0% | |
| GGCAAGTCCATTTGTGAGTA+GGG | - | chr7_4:34591752-34591771 | Msa1150790:three_prime_UTR | 45.0% | |
| AAGTCCATTTGTGAGTAGGG+TGG | - | chr7_4:34591755-34591774 | Msa1150790:three_prime_UTR | 45.0% | |
| ATCTCCACCCTACTCACAAA+TGG | + | chr7_4:34591762-34591781 | None:intergenic | 45.0% | |
| TTGAGTATGTCGATGAGACC+TGG | - | chr7_4:34591931-34591950 | Msa1150790:three_prime_UTR | 45.0% | |
| TGATCTCGGTTCAGTTGGAT+GGG | + | chr7_4:34592182-34592201 | None:intergenic | 45.0% | |
| TCATGTGATCTCGGTTCAGT+TGG | + | chr7_4:34592187-34592206 | None:intergenic | 45.0% | |
| ACACACAACACGGGATTTCT+TGG | + | chr7_4:34593237-34593256 | None:intergenic | 45.0% | |
| CACAACACAACACACAACAC+GGG | + | chr7_4:34593246-34593265 | None:intergenic | 45.0% | |
| ! | AACCTCACTAAGGGTGTGTT+TGG | - | chr7_4:34593666-34593685 | Msa1150790:intron | 45.0% |
| ATCCAAACACACCCTTAGTG+AGG | + | chr7_4:34593671-34593690 | None:intergenic | 45.0% | |
| ! | TCACTAAGGGTGTGTTTGGA+TGG | - | chr7_4:34593670-34593689 | Msa1150790:intron | 45.0% |
| GTTTGGATGGAGGATTTAGG+AGG | - | chr7_4:34593683-34593702 | Msa1150790:intron | 45.0% | |
| TTGGATGGAGGATTTAGGAG+GGG | - | chr7_4:34593685-34593704 | Msa1150790:intron | 45.0% | |
| ! | ACCAGTGTTTAAGTGCTGCA+CGG | - | chr7_4:34594347-34594366 | Msa1150790:intron | 45.0% |
| TTCTTTGGTGGAGAGGAGAT+TGG | - | chr7_4:34594466-34594485 | Msa1150790:intron | 45.0% | |
| CACCAACCATCCAGTTGTTA+AGG | - | chr7_4:34594609-34594628 | Msa1150790:intron | 45.0% | |
| !! | TTATTATTAATAAAAAAACA+AGG | + | chr7_4:34593295-34593314 | None:intergenic | 5.0% |
| !!! | TCAAAAAAATATTTTTTTTT+TGG | - | chr7_4:34593569-34593588 | Msa1150790:intron | 5.0% |
| !!! | CAAAAAAATATTTTTTTTTT+GGG | - | chr7_4:34593570-34593589 | Msa1150790:intron | 5.0% |
| !!! | AAAAAAATATTTTTTTTTTG+GGG | - | chr7_4:34593571-34593590 | Msa1150790:intron | 5.0% |
| !!! | TAGTTTTTATTTTTAAATTA+CGG | + | chr7_4:34593946-34593965 | None:intergenic | 5.0% |
| ! | CGAGCCAAGGCTCTTTTGTA+AGG | + | chr7_4:34591984-34592003 | None:intergenic | 50.0% |
| ! | AAAGAGCCTTGGCTCGTTTC+TGG | - | chr7_4:34591988-34592007 | Msa1150790:CDS | 50.0% |
| GTGATCTCGGTTCAGTTGGA+TGG | + | chr7_4:34592183-34592202 | None:intergenic | 50.0% | |
| ! | AGCTCTCTTTGTTGTCGCTG+TGG | - | chr7_4:34592782-34592801 | Msa1150790:intron | 50.0% |
| ! | TTTGTTGTCGCTGTGGAGAC+TGG | - | chr7_4:34592789-34592808 | Msa1150790:intron | 50.0% |
| TTGTTGTCGCTGTGGAGACT+GGG | - | chr7_4:34592790-34592809 | Msa1150790:intron | 50.0% | |
| CGAATGGTGGTATAAGGGAC+GGG | + | chr7_4:34593609-34593628 | None:intergenic | 50.0% | |
| GCGAATGGTGGTATAAGGGA+CGG | + | chr7_4:34593610-34593629 | None:intergenic | 50.0% | |
| AGGGGCGAATGGTGGTATAA+GGG | + | chr7_4:34593614-34593633 | None:intergenic | 50.0% | |
| ACAAATACAGGGGCGAATGG+TGG | + | chr7_4:34593622-34593641 | None:intergenic | 50.0% | |
| CACACCCTTAGTGAGGTTTG+TGG | + | chr7_4:34593664-34593683 | None:intergenic | 50.0% | |
| ! | CTAAGGGTGTGTTTGGATGG+AGG | - | chr7_4:34593673-34593692 | Msa1150790:intron | 50.0% |
| ATGGAGGATTTAGGAGGGGA+AGG | - | chr7_4:34593689-34593708 | Msa1150790:intron | 50.0% | |
| TGGAGGATTTAGGAGGGGAA+GGG | - | chr7_4:34593690-34593709 | Msa1150790:intron | 50.0% | |
| TTGAGGGTTTAAGAGGGGCA+GGG | + | chr7_4:34593980-34593999 | None:intergenic | 50.0% | |
| ATTGAGGGTTTAAGAGGGGC+AGG | + | chr7_4:34593981-34594000 | None:intergenic | 50.0% | |
| TCCGTGCAGCACTTAAACAC+TGG | + | chr7_4:34594351-34594370 | None:intergenic | 50.0% | |
| CTTGGTCCAGAAACGAGCCA+AGG | + | chr7_4:34591997-34592016 | None:intergenic | 55.0% | |
| AGGGGTCGGAGTTCGAACTT+CGG | + | chr7_4:34592141-34592160 | None:intergenic | 55.0% | |
| CAGGGGCGAATGGTGGTATA+AGG | + | chr7_4:34593615-34593634 | None:intergenic | 55.0% | |
| AGGATTTAGGAGGGGAAGGG+AGG | - | chr7_4:34593693-34593712 | Msa1150790:intron | 55.0% | |
| GGATTTAGGAGGGGAAGGGA+GGG | - | chr7_4:34593694-34593713 | Msa1150790:intron | 55.0% | |
| GATTTAGGAGGGGAAGGGAG+GGG | - | chr7_4:34593695-34593714 | Msa1150790:intron | 55.0% | |
| !! | TGTGTGGACGTGGTGGGTTG+TGG | - | chr7_4:34593316-34593335 | Msa1150790:intron | 60.0% |
| !! | GTGTGGACGTGGTGGGTTGT+GGG | - | chr7_4:34593317-34593336 | Msa1150790:intron | 60.0% |
| TAAGAGGGGCAGGGAGAGGA+GGG | + | chr7_4:34593971-34593990 | None:intergenic | 60.0% | |
| TTAAGAGGGGCAGGGAGAGG+AGG | + | chr7_4:34593972-34593991 | None:intergenic | 60.0% | |
| GGTTTAAGAGGGGCAGGGAG+AGG | + | chr7_4:34593975-34593994 | None:intergenic | 60.0% | |
| TTAGGAGGGGAAGGGAGGGG+AGG | - | chr7_4:34593698-34593717 | Msa1150790:intron | 65.0% | |
| TAGGAGGGGAAGGGAGGGGA+GGG | - | chr7_4:34593699-34593718 | Msa1150790:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_4 | gene | 34591711 | 34594914 | 34591711 | ID=Msa1150790;Name=Msa1150790 |
| chr7_4 | mRNA | 34591711 | 34594914 | 34591711 | ID=Msa1150790-mRNA-1;Parent=Msa1150790;Name=Msa1150790-mRNA-1;_AED=0.42;_eAED=0.42;_QI=0|0|0.5|1|0|0.5|2|245|176 |
| chr7_4 | exon | 34591711 | 34592273 | 34591711 | ID=Msa1150790-mRNA-1:exon:8222;Parent=Msa1150790-mRNA-1 |
| chr7_4 | exon | 34594702 | 34594914 | 34594702 | ID=Msa1150790-mRNA-1:exon:8221;Parent=Msa1150790-mRNA-1 |
| chr7_4 | CDS | 34594702 | 34594914 | 34594702 | ID=Msa1150790-mRNA-1:cds;Parent=Msa1150790-mRNA-1 |
| chr7_4 | CDS | 34591956 | 34592273 | 34591956 | ID=Msa1150790-mRNA-1:cds;Parent=Msa1150790-mRNA-1 |
| chr7_4 | three_prime_UTR | 34591711 | 34591955 | 34591711 | ID=Msa1150790-mRNA-1:three_prime_utr;Parent=Msa1150790-mRNA-1 |
| Gene Sequence |
| Protein sequence |
