AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1269250

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1269250 MtrunA17_Chr4g0004101 97.583 331 4 1 286 612 1 331 0.0 670
Msa1269250 MtrunA17_Chr4g0004841 85.065 308 38 2 313 612 33 340 0.0 543
Msa1269250 MtrunA17_Chr4g0004091 85.185 297 21 3 1 283 1 288 6.90e-151 436
Msa1269250 MtrunA17_Chr4g0004831 72.364 275 67 2 1 275 1 266 5.93e-121 359
Msa1269250 MtrunA17_Chr6g0471921 29.303 488 287 18 131 608 68 507 1.15e-45 169
Msa1269250 MtrunA17_Chr4g0039791 26.773 437 259 15 194 611 166 560 2.23e-33 134
Msa1269250 MtrunA17_Chr4g0028411 28.571 392 235 14 221 604 180 534 8.20e-33 132
Msa1269250 MtrunA17_Chr5g0409771 25.237 527 340 14 96 611 71 554 1.06e-32 132
Msa1269250 MtrunA17_Chr5g0409791 26.667 405 257 12 215 611 195 567 1.02e-31 129
Msa1269250 MtrunA17_Chr1g0157401 26.531 392 240 13 231 611 205 559 4.16e-31 128
Msa1269250 MtrunA17_Chr1g0186071 28.866 388 227 14 226 604 201 548 3.91e-30 125
Msa1269250 MtrunA17_Chr3g0116251 25.463 432 276 13 183 604 153 548 6.32e-29 121
Msa1269250 MtrunA17_Chr2g0292471 24.776 557 335 18 103 611 36 556 1.16e-28 120
Msa1269250 MtrunA17_Chr1g0180541 26.768 396 242 13 221 604 181 540 5.95e-28 118
Msa1269250 MtrunA17_Chr1g0180551 26.546 388 239 14 228 604 261 613 3.04e-27 116
Msa1269250 MtrunA17_Chr8g0353341 26.957 345 206 12 222 553 199 510 1.79e-26 114
Msa1269250 MtrunA17_Chr3g0116271 24.537 432 283 12 183 604 152 550 2.43e-26 113
Msa1269250 MtrunA17_Chr4g0072561 24.324 518 330 16 104 604 68 540 9.46e-26 111
Msa1269250 MtrunA17_Chr5g0395431 23.675 566 339 19 67 605 81 580 2.39e-25 110
Msa1269250 MtrunA17_Chr2g0327341 24.745 392 250 13 221 604 177 531 5.26e-25 109
Msa1269250 MtrunA17_Chr5g0433231 27.578 446 238 20 193 607 153 544 1.67e-24 107
Msa1269250 MtrunA17_Chr5g0433221 26.444 450 238 16 193 607 153 544 9.01e-24 105
Msa1269250 MtrunA17_Chr7g0252691 27.068 399 236 19 229 607 359 722 1.37e-22 102
Msa1269250 MtrunA17_Chr6g0471311 26.108 406 222 16 231 607 190 546 3.08e-22 100
Msa1269250 MtrunA17_Chr3g0109731 26.173 405 243 13 221 605 179 547 4.96e-22 100
Msa1269250 MtrunA17_Chr1g0205711 26.211 351 186 8 230 535 258 580 1.00e-21 99.8
Msa1269250 MtrunA17_Chr4g0000461 21.771 542 346 19 83 605 53 535 1.15e-21 99.0
Msa1269250 MtrunA17_Chr3g0102411 25.066 379 241 14 237 606 191 535 6.99e-21 96.7
Msa1269250 MtrunA17_Chr1g0197391 25.510 392 229 14 231 604 212 558 1.21e-20 95.9
Msa1269250 MtrunA17_Chr8g0370701 25.063 399 238 15 227 606 222 578 1.07e-19 93.2
Msa1269250 MtrunA17_Chr5g0433241 26.024 415 244 17 212 607 173 543 1.26e-19 92.8
Msa1269250 MtrunA17_Chr8g0351251 24.525 526 304 20 122 604 146 621 1.83e-19 93.2
Msa1269250 MtrunA17_Chr2g0301671 26.619 417 241 16 211 605 179 552 4.29e-19 91.3
Msa1269250 MtrunA17_Chr8g0370731 24.455 413 247 14 213 606 123 489 1.41e-18 89.4
Msa1269250 MtrunA17_Chr4g0068151 26.396 394 223 18 237 605 201 552 1.93e-17 85.9
Msa1269250 MtrunA17_Chr5g0396311 33.974 156 90 5 455 606 388 534 2.72e-15 79.0
Msa1269250 MtrunA17_Chr2g0334131 25.287 261 163 10 362 605 32 277 2.13e-14 74.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1269250 AT3G16170.1 61.851 616 181 11 13 612 31 608 0.0 732
Msa1269250 AT3G48990.1 27.181 493 306 14 119 602 56 504 1.45e-45 169
Msa1269250 AT4G19010.1 25.316 395 239 12 230 608 204 558 3.13e-34 137
Msa1269250 AT1G20510.1 26.566 399 230 12 230 610 189 542 3.75e-34 137
Msa1269250 AT1G20480.1 27.919 394 230 13 230 611 213 564 8.79e-34 136
Msa1269250 AT1G30520.2 27.446 419 231 15 228 610 170 551 1.60e-31 129
Msa1269250 AT1G30520.1 27.446 419 231 15 228 610 170 551 1.60e-31 129
Msa1269250 AT1G20500.1 26.582 395 239 13 228 611 195 549 9.64e-30 124
Msa1269250 AT5G63380.1 25.500 400 254 11 216 607 190 553 1.88e-29 123
Msa1269250 AT5G38120.1 26.768 396 231 13 230 611 199 549 2.37e-27 117
Msa1269250 AT4G05160.1 24.557 395 254 9 225 611 185 543 2.56e-27 117
Msa1269250 AT1G65060.1 23.845 541 339 19 81 605 74 557 5.11e-27 116
Msa1269250 AT3G21240.1 25.000 424 260 17 197 605 167 547 7.74e-27 115
Msa1269250 AT1G21530.2 25.245 408 224 12 232 607 186 544 2.90e-25 110
Msa1269250 AT1G21530.1 26.277 411 214 14 232 607 186 542 1.19e-24 108
Msa1269250 AT1G21540.1 24.941 421 243 13 217 610 174 548 3.98e-24 107
Msa1269250 AT1G20510.2 26.625 323 180 11 230 534 189 472 4.25e-24 106
Msa1269250 AT5G36880.2 26.531 441 252 19 199 607 314 714 1.28e-23 106
Msa1269250 AT5G36880.6 26.531 441 252 19 199 607 264 664 1.41e-23 106
Msa1269250 AT5G36880.3 26.531 441 252 19 199 607 264 664 1.41e-23 106
Msa1269250 AT5G36880.5 26.531 441 252 19 199 607 264 664 1.41e-23 106
Msa1269250 AT5G36880.1 26.531 441 252 19 199 607 264 664 1.41e-23 106
Msa1269250 AT1G77240.1 24.654 434 239 16 208 610 167 543 2.60e-23 104
Msa1269250 AT5G38120.3 27.893 337 190 12 230 552 199 496 1.25e-22 102
Msa1269250 AT5G27600.1 27.635 351 181 9 230 535 261 583 1.02e-21 100
Msa1269250 AT1G20510.3 26.846 298 173 10 230 517 189 451 2.23e-21 98.2
Msa1269250 AT1G51680.1 22.222 495 323 16 131 605 102 554 3.84e-21 97.8
Msa1269250 AT1G65880.1 25.672 409 237 15 227 607 183 552 5.00e-21 97.8
Msa1269250 AT5G16340.1 28.954 411 208 19 228 607 183 540 9.12e-21 96.7
Msa1269250 AT3G21230.1 24.051 395 242 13 228 605 208 561 2.47e-20 95.5
Msa1269250 AT1G65890.1 24.755 408 241 15 227 607 183 551 5.76e-20 94.4
Msa1269250 AT5G36880.4 27.945 365 204 17 199 536 264 596 8.14e-20 94.0
Msa1269250 AT1G66120.1 25.377 398 236 13 231 607 187 544 1.23e-19 93.2
Msa1269250 AT1G65060.2 24.161 447 282 16 81 518 74 472 1.71e-19 92.4
Msa1269250 AT5G16370.1 27.725 422 229 19 211 607 170 540 2.16e-19 92.4
Msa1269250 AT5G38120.4 27.586 319 178 12 230 534 199 478 2.62e-19 91.7
Msa1269250 AT5G38120.2 27.586 319 178 12 230 534 199 478 2.62e-19 91.7
Msa1269250 AT3G21240.2 25.424 354 212 15 197 535 167 483 3.44e-19 91.7
Msa1269250 AT3G21240.3 25.424 354 212 15 197 535 167 483 3.44e-19 91.7
Msa1269250 AT1G30520.3 27.010 311 166 11 228 514 170 443 3.94e-19 91.3
Msa1269250 AT1G30520.4 27.010 311 166 11 228 514 170 443 3.94e-19 91.3
Msa1269250 AT2G17650.1 27.251 411 235 17 217 606 228 595 4.69e-19 91.7
Msa1269250 AT1G20560.2 26.768 396 225 16 231 605 110 461 5.14e-19 90.9
Msa1269250 AT3G05970.1 29.085 306 138 10 230 489 261 533 5.52e-19 91.7
Msa1269250 AT1G20560.1 26.768 396 225 16 231 605 188 539 5.54e-19 91.3
Msa1269250 AT1G75960.1 26.566 399 234 15 228 607 182 540 2.21e-18 89.4
Msa1269250 AT1G68270.1 28.800 250 152 7 381 607 275 521 6.19e-18 87.8
Msa1269250 AT3G16910.1 22.184 586 342 18 66 605 38 555 9.02e-18 87.4
Msa1269250 AT1G62940.1 23.990 396 252 15 223 605 174 533 9.91e-17 84.0
Msa1269250 AT1G51680.3 22.273 440 286 14 131 550 102 505 1.62e-16 83.2
Msa1269250 AT3G21230.2 23.282 451 293 13 103 535 82 497 6.18e-15 78.2
Msa1269250 AT1G51680.2 22.118 425 275 14 131 535 102 490 3.46e-14 75.9
Msa1269250 AT1G20490.2 25.993 277 169 10 230 501 199 444 2.43e-13 72.8
Msa1269250 AT1G20490.1 25.993 277 169 10 230 501 199 444 2.43e-13 72.8

Find 164 sgRNAs with CRISPR-Local

Find 413 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGTTAACAATTTGATTAATT+TGG 0.184579 8_3:+2467527 Msa1269250:three_prime_UTR
ACAATAAGTTTAACCTTATT+AGG 0.223251 8_3:+2467398 Msa1269250:three_prime_UTR
CTTCATCGTTTAAAGAATAT+TGG 0.225924 8_3:+2465722 Msa1269250:CDS
AAAATAGAAGCCCTTTATTC+TGG 0.231622 8_3:+2467363 Msa1269250:three_prime_UTR
CATCACTGGACATCGCTTAT+TGG 0.257721 8_3:+2464926 Msa1269250:CDS
GATTCCCATTCTTGCATAAC+AGG 0.259251 8_3:-2464903 None:intergenic
AGTTTAGTGTCAGTGGAATT+TGG 0.269993 8_3:+2463893 Msa1269250:CDS
ACCATTCGAACATTATTTAC+TGG 0.275866 8_3:+2467267 Msa1269250:three_prime_UTR
TAAAACTGGTTTCAAAGAAT+TGG 0.284061 8_3:-2467296 None:intergenic
TATTAGGAACGGGCGGAATA+TGG 0.284839 8_3:-2462957 None:intergenic
AGCAATGGACATTCACAAAA+TGG 0.285738 8_3:+2462997 Msa1269250:CDS
GGAACTCATTGAATTGATTA+TGG 0.292760 8_3:-2460400 None:intergenic
GTAAGGTGCAAGTTTATTCT+TGG 0.296335 8_3:-2466828 None:intergenic
TGTCTCAGAATGTTGCGTTT+TGG 0.296796 8_3:+2466694 Msa1269250:CDS
CTGCAAGCCACTTCAGCATC+TGG 0.302779 8_3:+2464343 Msa1269250:CDS
CACACGTTGGTTGGTTGGTT+TGG 0.312189 8_3:-2460250 None:intergenic
CTCTTCTCTGAGGAATTATT+AGG 0.319129 8_3:-2462973 None:intergenic
TTTGTTTAGTCAATCATTTA+TGG 0.319332 8_3:+2462390 Msa1269250:intron
GCTGAAGTGGCTTGCAGCTC+AGG 0.329316 8_3:-2464337 None:intergenic
TCTTTATCTTGCTTCTCCTT+TGG 0.336159 8_3:-2466764 None:intergenic
ATCTCAATCTACAACATATA+TGG 0.339248 8_3:+2461831 Msa1269250:CDS
CACGATAACCTTGTATTAAC+CGG 0.339824 8_3:-2464306 None:intergenic
AACAAATTCGGCAGACGGTT+TGG 0.361786 8_3:-2462460 None:intergenic
CTATAGAAAAGCCAGAATAA+AGG 0.366056 8_3:-2467374 None:intergenic
GATAATTCTTCAAGGCTTAG+AGG 0.370730 8_3:-2466797 None:intergenic
CGCAAGGAACTTGCGTCTAA+TGG 0.372250 8_3:+2464366 Msa1269250:CDS
GCTTTGCGCTCGCCATTCAA+TGG 0.384435 8_3:-2465136 None:intergenic
CTCAACCTGTTATGCAAGAA+TGG 0.387119 8_3:+2464898 Msa1269250:CDS
CAATATTCTTTAAACGATGA+AGG 0.393477 8_3:-2465721 None:intergenic
CCGTCTGCCGAATTTGTTGC+TGG 0.396519 8_3:+2462465 Msa1269250:CDS
CATCGCTTATTGGAGCGATA+TGG 0.400187 8_3:+2464936 Msa1269250:CDS
GAGCATGAGAATGAAGAAAC+TGG 0.410340 8_3:+2465673 Msa1269250:CDS
CATTTATGGCGTTGAAATCC+AGG 0.411371 8_3:+2462404 Msa1269250:CDS
TATAGAAAAGCCAGAATAAA+GGG 0.414705 8_3:-2467373 None:intergenic
CCCAGTTGGATAATTCTTCA+AGG 0.414735 8_3:-2466805 None:intergenic
GATGTCACAACAGTTAGTAT+TGG 0.418459 8_3:-2460189 None:intergenic
ACGCTCCCTCGCAATGCAAT+GGG 0.419172 8_3:+2467081 Msa1269250:CDS
ATTTCTCCGTAGTCTTTGTC+TGG 0.420974 8_3:-2466722 None:intergenic
GCAATGGACATTCACAAAAT+GGG 0.424211 8_3:+2462998 Msa1269250:CDS
TCTGAGGAATTATTAGGAAC+GGG 0.426016 8_3:-2462967 None:intergenic
CCTCTATGTGATGAATAATT+CGG 0.426522 8_3:+2462557 Msa1269250:CDS
GCCTTGAAGAATTATCCAAC+TGG 0.429353 8_3:+2466804 Msa1269250:CDS
TCAAACGCTTACGTTGTTGT+TGG 0.432351 8_3:+2460319 Msa1269250:five_prime_UTR
AAATTGAGAGGAAGAGAAGA+TGG 0.445403 8_3:-2460520 None:intergenic
TGTGTATGAACAACTCCCTT+AGG 0.445619 8_3:-2463224 None:intergenic
CCATTCAACCATACCTTGTA+AGG 0.450089 8_3:-2466845 None:intergenic
GTTGAAATCCAGGGAAATCT+TGG 0.451333 8_3:+2462414 Msa1269250:CDS
GTACTTGCGACTTGGTTTAG+TGG 0.452867 8_3:+2462489 Msa1269250:CDS
AAGTACTCCAGCAACAAATT+CGG 0.453295 8_3:-2462472 None:intergenic
TTTCACTTTCACACGTTGGT+TGG 0.457048 8_3:-2460259 None:intergenic
CTAACCTGCACACCAGGAAA+TGG 0.458093 8_3:-2465175 None:intergenic
ACTTTCACACGTTGGTTGGT+TGG 0.458480 8_3:-2460255 None:intergenic
ACATAGAGGAGCTCTACTTC+TGG 0.459113 8_3:-2462543 None:intergenic
TTGAATGGCGAGCGCAAAGC+AGG 0.462485 8_3:+2465139 Msa1269250:CDS
TGGTTTCAAAGAATTGGCTT+TGG 0.463672 8_3:-2467290 None:intergenic
TTGTATACTAGCGGGACAAC+AGG 0.464707 8_3:+2463197 Msa1269250:CDS
CATACTTACTCCAGTGAATA+CGG 0.469363 8_3:-2463971 None:intergenic
CCTTGCGCCAGATGCTGAAG+TGG 0.474939 8_3:-2464350 None:intergenic
GACGCTCCCTCGCAATGCAA+TGG 0.475140 8_3:+2467080 Msa1269250:CDS
GATGGAAGGGAGGCAGAAGA+GGG 0.476022 8_3:-2460449 None:intergenic
AAAACCATTTCCTGGTGTGC+AGG 0.476589 8_3:+2465171 Msa1269250:CDS
AATTGAGAGGAAGAGAAGAT+GGG 0.482322 8_3:-2460519 None:intergenic
CATGTACTTCATATATGTTA+AGG 0.483135 8_3:-2463658 None:intergenic
AATCTTGGTGGAGCTCGAAT+AGG 0.490823 8_3:+2462429 Msa1269250:CDS
CATTCTTGCATAACAGGTTG+AGG 0.493045 8_3:-2464897 None:intergenic
ATTAACCGGGTGTACATAGT+TGG 0.494598 8_3:-2464292 None:intergenic
GAATAAACTTGCACCTTACA+AGG 0.497001 8_3:+2466832 Msa1269250:CDS
ATTTGGCTCAGGTGAAGATC+CGG 0.499188 8_3:+2463166 Msa1269250:intron
TGATGGAAGGGAGGCAGAAG+AGG 0.499826 8_3:-2460450 None:intergenic
GACGATGGATACTTTAAGAC+TGG 0.501182 8_3:+2466073 Msa1269250:CDS
TTGCTGGAGTACTTGCGACT+TGG 0.503599 8_3:+2462481 Msa1269250:CDS
ATAAGTTTAACCTTATTAGG+AGG 0.504386 8_3:+2467401 Msa1269250:three_prime_UTR
TCAACCTGTTATGCAAGAAT+GGG 0.504435 8_3:+2464899 Msa1269250:CDS
AATATTCTTTAAACGATGAA+GGG 0.504764 8_3:-2465720 None:intergenic
ACTGCAATTTGCGGTGAAGT+AGG 0.505561 8_3:-2460365 None:intergenic
GAGCTCCACCAAGATTTCCC+TGG 0.506932 8_3:-2462422 None:intergenic
CTCTGAGGAATTATTAGGAA+CGG 0.512730 8_3:-2462968 None:intergenic
ACCGTCGGAAAACCATTTCC+TGG 0.512963 8_3:+2465163 Msa1269250:CDS
CATTCTATTATTCAGATGTG+TGG 0.513048 8_3:+2464861 Msa1269250:intron
AATGGTATTTACTGTTCTGA+AGG 0.514743 8_3:-2467250 None:intergenic
TCAGCTTTAGATCCTTCAGT+TGG 0.515164 8_3:-2463937 None:intergenic
CCGTGGAACCTGCGTAGAGA+GGG 0.516939 8_3:-2463709 None:intergenic
CCCTCTCTACGCAGGTTCCA+CGG 0.516961 8_3:+2463709 Msa1269250:CDS
GCATTGTCAAATCCATTGAA+TGG 0.519766 8_3:+2465124 Msa1269250:CDS
TAAGTTTAACCTTATTAGGA+GGG 0.520775 8_3:+2467402 Msa1269250:three_prime_UTR
AAGCAAGAAGCTGCAGCTCA+TGG 0.521419 8_3:+2461874 Msa1269250:CDS
TCCTCAGAGAAGAGCAGCAA+TGG 0.522859 8_3:+2462982 Msa1269250:CDS
ACACAGAAGCATCCTTGCTC+AGG 0.530891 8_3:+2463244 Msa1269250:CDS
GCCAGTAAATAATGTTCGAA+TGG 0.534407 8_3:-2467268 None:intergenic
CCAAACCTTGACAAAAGCAT+GGG 0.537226 8_3:+2463459 Msa1269250:CDS
TTTATGAGGATGATGATGGA+AGG 0.539888 8_3:-2460463 None:intergenic
TCGATGTTTCTAGTTTGTCA+TGG 0.542982 8_3:+2465102 Msa1269250:intron
CGGGACAACAGGTAAACCTA+AGG 0.543179 8_3:+2463208 Msa1269250:CDS
AATACAAGGTTATCGTGCTA+TGG 0.543439 8_3:+2464312 Msa1269250:CDS
CAAGAATGGGAATCCATCAC+TGG 0.546151 8_3:+2464912 Msa1269250:CDS
AGAATTTATGAGGATGATGA+TGG 0.547294 8_3:-2460467 None:intergenic
GCTCAACTAACCTGCACACC+AGG 0.548833 8_3:-2465181 None:intergenic
ATTGAGAGGAAGAGAAGATG+GGG 0.549638 8_3:-2460518 None:intergenic
GCAGTTACTACGGATAAAGA+TGG 0.552792 8_3:+2466100 Msa1269250:CDS
TCAGTGGAATTTGGAAGAGA+TGG 0.553750 8_3:+2463902 Msa1269250:CDS
GACTGGAGATGCAGTTACTA+CGG 0.556507 8_3:+2466090 Msa1269250:CDS
CCGAATTATTCATCACATAG+AGG 0.556775 8_3:-2462557 None:intergenic
TTGCCGAAGTTTAGTGTCAG+TGG 0.557108 8_3:+2463886 Msa1269250:CDS
TCCAAACCTTGACAAAAGCA+TGG 0.558392 8_3:+2463458 Msa1269250:CDS
GAGCGCAAAGCAGGCACCGT+CGG 0.558532 8_3:+2465148 Msa1269250:CDS
GGTGCTATAACCGTATTCAC+TGG 0.559650 8_3:+2463961 Msa1269250:CDS
TTACTGGCCCCTCTCTACGC+AGG 0.560115 8_3:+2463701 Msa1269250:CDS
TGGTTCTGAGAGAATTTATG+AGG 0.561344 8_3:-2460477 None:intergenic
TTTGTTGAGAGTCTTAAATG+AGG 0.563825 8_3:-2460421 None:intergenic
TTATGAGGATGATGATGGAA+GGG 0.565229 8_3:-2460462 None:intergenic
ACCTTCCCCATTGCATTGCG+AGG 0.567106 8_3:-2467087 None:intergenic
ATGTACACCCGGTTAATACA+AGG 0.574328 8_3:+2464298 Msa1269250:CDS
GGCTTACCAGACAAAGACTA+CGG 0.574953 8_3:+2466716 Msa1269250:CDS
CCCTCGCAATGCAATGGGGA+AGG 0.576410 8_3:+2467086 Msa1269250:CDS
ATTTATGGCGTTGAAATCCA+GGG 0.577977 8_3:+2462405 Msa1269250:CDS
ACGCAACATTCTGAGACAGT+TGG 0.578421 8_3:-2466689 None:intergenic
TCTGGATAGCTGAGTGCAAG+TGG 0.578460 8_3:-2462525 None:intergenic
ACCGTGGAACCTGCGTAGAG+AGG 0.581544 8_3:-2463710 None:intergenic
TGAGGATGATGATGGAAGGG+AGG 0.583047 8_3:-2460459 None:intergenic
CTAGTATACAAAATCAGTGC+CGG 0.583079 8_3:-2463185 None:intergenic
CCACTTCAGCATCTGGCGCA+AGG 0.583841 8_3:+2464350 Msa1269250:CDS
GAAATCCAGGGAAATCTTGG+TGG 0.584081 8_3:+2462417 Msa1269250:CDS
CCTTCCCCATTGCATTGCGA+GGG 0.586496 8_3:-2467086 None:intergenic
AAGTTTAACCTTATTAGGAG+GGG 0.590100 8_3:+2467403 Msa1269250:three_prime_UTR
CAATAAGCGATGTCCAGTGA+TGG 0.591538 8_3:-2464925 None:intergenic
TTGTGCGATTATCGTGCCAA+AGG 0.592723 8_3:+2466748 Msa1269250:CDS
CCAGCAACAAATTCGGCAGA+CGG 0.593121 8_3:-2462465 None:intergenic
CCTTGAAGAATTATCCAACT+GGG 0.594518 8_3:+2466805 Msa1269250:CDS
CTTGCGACTTGGTTTAGTGG+AGG 0.596081 8_3:+2462492 Msa1269250:CDS
AAGATATCTAATCTCTTGTG+TGG 0.596230 8_3:+2461961 Msa1269250:CDS
AGATGATGAACGAAATTGAG+AGG 0.602992 8_3:-2460532 None:intergenic
TCCATTGCTGCTCTTCTCTG+AGG 0.604481 8_3:-2462983 None:intergenic
GCAATTTGCGGTGAAGTAGG+TGG 0.604783 8_3:-2460362 None:intergenic
CGTGAGTCATATCCAACTGA+AGG 0.605168 8_3:+2463925 Msa1269250:CDS
ACTGAAGGATCTAAAGCTGA+TGG 0.608878 8_3:+2463940 Msa1269250:CDS
AAGGAATCATTTACAGACGA+TGG 0.612731 8_3:+2466058 Msa1269250:CDS
TTGAGAGGAAGAGAAGATGG+GGG 0.615724 8_3:-2460517 None:intergenic
CAATGGACATTCACAAAATG+GGG 0.615787 8_3:+2462999 Msa1269250:CDS
TCATAAAGCATACCTGAGCA+AGG 0.617886 8_3:-2463256 None:intergenic
AAGTTTATTCTTGGCCCAGT+TGG 0.618670 8_3:-2466819 None:intergenic
TCCCACACGATTAGTCGAGT+TGG 0.618951 8_3:-2467057 None:intergenic
TACCAACTCGACTAATCGTG+TGG 0.621684 8_3:+2467055 Msa1269250:CDS
ATATATGAAGTACATGTCCA+CGG 0.624150 8_3:+2463665 Msa1269250:CDS
ATTCCACTGACACTAAACTT+CGG 0.629573 8_3:-2463889 None:intergenic
GAGAATGAAGAAACTGGAGC+TGG 0.632470 8_3:+2465679 Msa1269250:CDS
AATTCTTCAAGGCTTAGAGG+AGG 0.633061 8_3:-2466794 None:intergenic
TCAATCTACAACATATATGG+AGG 0.639302 8_3:+2461834 Msa1269250:CDS
GGGACAACAGGTAAACCTAA+GGG 0.643408 8_3:+2463209 Msa1269250:CDS
TATATGAAGTACATGTCCAC+GGG 0.644345 8_3:+2463666 Msa1269250:CDS
CGTGGAACCTGCGTAGAGAG+GGG 0.649202 8_3:-2463708 None:intergenic
ACGATAACCTTGTATTAACC+GGG 0.652167 8_3:-2464305 None:intergenic
TTACAAGCAACTCATCTCGT+CGG 0.660566 8_3:+2461933 Msa1269250:CDS
AATGCGGATATAATCAAGAG+TGG 0.667412 8_3:+2466509 Msa1269250:CDS
GCGGATATAATCAAGAGTGG+TGG 0.670937 8_3:+2466512 Msa1269250:CDS
AGAATATTGGAAACTTCCTG+AGG 0.673119 8_3:+2465735 Msa1269250:CDS
ACCAACTCGACTAATCGTGT+GGG 0.673721 8_3:+2467056 Msa1269250:CDS
AGGTTCCAACTATGTACACC+CGG 0.678598 8_3:+2464287 Msa1269250:intron
GTAAACCATTGAAAATCCCG+TGG 0.679256 8_3:-2463682 None:intergenic
GAGGAATTATTAGGAACGGG+CGG 0.680276 8_3:-2462964 None:intergenic
CTTGTGTGGAAATGATGTGA+AGG 0.681768 8_3:+2461975 Msa1269250:CDS
CAAACCTTGACAAAAGCATG+GGG 0.685674 8_3:+2463460 Msa1269250:CDS
CGCTCCCTCGCAATGCAATG+GGG 0.686193 8_3:+2467082 Msa1269250:CDS
AACAGGTTGAGGAAGTGCAG+AGG 0.696442 8_3:-2464886 None:intergenic
AAACCTTGACAAAAGCATGG+GGG 0.779941 8_3:+2463461 Msa1269250:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTTTAATTAAACAAAAC+AGG - chr8_3:2460704-2460723 None:intergenic 10.0%
!!! TATTTTAAAAAAAAAGTTCA+TGG + chr8_3:2461056-2461075 Msa1269250:intron 10.0%
!!! ATTTTAAAAAAAAAGTTCAT+GGG + chr8_3:2461057-2461076 Msa1269250:intron 10.0%
!! ATTTGAAAATTTCATATAAA+AGG - chr8_3:2462695-2462714 None:intergenic 10.0%
!! CTTAATAAAAATTTGATTAT+AGG + chr8_3:2462855-2462874 Msa1269250:intron 10.0%
!!! TTATAATTTTTCTTGATTTT+AGG + chr8_3:2463435-2463454 Msa1269250:intron 10.0%
!!! TCTAAATAATTTTTTAATGA+AGG + chr8_3:2464267-2464286 Msa1269250:intron 10.0%
!!! AAAATGGATTTTTTTTACTA+TGG + chr8_3:2460721-2460740 Msa1269250:intron 15.0%
!!! AATTTGATTTAATATGTTGT+TGG + chr8_3:2460802-2460821 Msa1269250:intron 15.0%
!!! ATTTGATTTAATATGTTGTT+GGG + chr8_3:2460803-2460822 Msa1269250:intron 15.0%
!! TAAATTATTCTTATAAGTGT+TGG + chr8_3:2461201-2461220 Msa1269250:intron 15.0%
!!! TTTTGTAATTTCTCTTATTT+TGG + chr8_3:2461268-2461287 Msa1269250:intron 15.0%
!!! TTTGTAATTTCTCTTATTTT+GGG + chr8_3:2461269-2461288 Msa1269250:intron 15.0%
!! GAATAACTTTATATAAATGT+GGG - chr8_3:2462272-2462291 None:intergenic 15.0%
!! AGAATAACTTTATATAAATG+TGG - chr8_3:2462273-2462292 None:intergenic 15.0%
!!! AAAATTGATATTTTCTTTTC+TGG - chr8_3:2463777-2463796 None:intergenic 15.0%
!! AAAAACTTATATGTTCAAAA+TGG - chr8_3:2463825-2463844 None:intergenic 15.0%
!! TAAATAATTTACAACCTTAT+TGG + chr8_3:2466409-2466428 Msa1269250:intron 15.0%
!! TTGCAAAATATTATTTAGAA+AGG + chr8_3:2467166-2467185 Msa1269250:intron 15.0%
!! TGTTAACAATTTGATTAATT+TGG + chr8_3:2467527-2467546 Msa1269250:three_prime_UTR 15.0%
!!! TTTTTGCTCATATGTTTTAT+TGG + chr8_3:2460751-2460770 Msa1269250:intron 20.0%
!!! TTTTGCTCATATGTTTTATT+GGG + chr8_3:2460752-2460771 Msa1269250:intron 20.0%
!!! TTTGATTTAATATGTTGTTG+GGG + chr8_3:2460804-2460823 Msa1269250:intron 20.0%
!!! TACAATTTCAAACACTATTT+TGG - chr8_3:2461017-2461036 None:intergenic 20.0%
!!! AAATAGTGTTTGAAATTGTA+AGG + chr8_3:2461017-2461036 Msa1269250:intron 20.0%
!! ATATCAAGTATTCAATTTCA+TGG - chr8_3:2461148-2461167 None:intergenic 20.0%
!! TAGCTTATAATTAACAGATT+TGG + chr8_3:2461396-2461415 Msa1269250:intron 20.0%
!! AGCTTATAATTAACAGATTT+GGG + chr8_3:2461397-2461416 Msa1269250:intron 20.0%
!! TAACTAAATAAATGTATCTG+CGG + chr8_3:2461619-2461638 Msa1269250:intron 20.0%
!! ATCTAATGAATTCATATGTA+AGG + chr8_3:2461777-2461796 Msa1269250:intron 20.0%
!!! TCTTTCTTTACCTTTTATTA+TGG + chr8_3:2462229-2462248 Msa1269250:intron 20.0%
!!! TTTGCTATTTCCATAATAAA+AGG - chr8_3:2462242-2462261 None:intergenic 20.0%
!! TTTGTTTAGTCAATCATTTA+TGG + chr8_3:2462390-2462409 Msa1269250:intron 20.0%
!!! ATATGAAATTTTCAAATAGC+TGG + chr8_3:2462698-2462717 Msa1269250:intron 20.0%
!! AAAGCATAATTAAAGCATAA+AGG - chr8_3:2462824-2462843 None:intergenic 20.0%
!!! TATGCTTTAATTATGCTTTT+TGG + chr8_3:2462825-2462844 Msa1269250:intron 20.0%
!! TGCATATAAAAAAACTTTCA+TGG - chr8_3:2463534-2463553 None:intergenic 20.0%
!! AGATTATATACAAAAAACCA+AGG - chr8_3:2464050-2464069 None:intergenic 20.0%
!!! ATGATTGTAAAACATGTTTT+CGG + chr8_3:2464230-2464249 Msa1269250:intron 20.0%
!!! ACTTAATCAATGTTTCTTTT+AGG + chr8_3:2464497-2464516 Msa1269250:intron 20.0%
!!! CTTAATCAATGTTTCTTTTA+GGG + chr8_3:2464498-2464517 Msa1269250:intron 20.0%
!!! AATAAAAAAGGGTATATTAG+TGG - chr8_3:2465331-2465350 None:intergenic 20.0%
!! TCATATATTACTTTCTTGAA+TGG - chr8_3:2465502-2465521 None:intergenic 20.0%
!! AATATTCTTTAAACGATGAA+GGG - chr8_3:2465723-2465742 None:intergenic 20.0%
!!! AATGTTTTCTACTTTTTATC+AGG + chr8_3:2466482-2466501 Msa1269250:intron 20.0%
!! AATTGAATCAGTAATATTAG+AGG + chr8_3:2466556-2466575 Msa1269250:intron 20.0%
!! TAACAAAAACTAACAATCAT+GGG - chr8_3:2466604-2466623 None:intergenic 20.0%
!! TTAACAAAAACTAACAATCA+TGG - chr8_3:2466605-2466624 None:intergenic 20.0%
!! TAAACTGTACAACTATATAA+GGG - chr8_3:2466632-2466651 None:intergenic 20.0%
!! ATAAACTGTACAACTATATA+AGG - chr8_3:2466633-2466652 None:intergenic 20.0%
!! ACAATAAGTTTAACCTTATT+AGG + chr8_3:2467398-2467417 Msa1269250:three_prime_UTR 20.0%
!!! ATAGCATTTTTATATTCATG+AGG + chr8_3:2467442-2467461 Msa1269250:three_prime_UTR 20.0%
!!! TAGCATTTTTATATTCATGA+GGG + chr8_3:2467443-2467462 Msa1269250:three_prime_UTR 20.0%
! CTATAAAAAACTGCAATTTG+CGG - chr8_3:2460377-2460396 None:intergenic 25.0%
!!! CTTGTTTTTGTTACTTACAA+TGG + chr8_3:2460587-2460606 Msa1269250:intron 25.0%
! TAATTAAACAAAACAGGACA+AGG - chr8_3:2460698-2460717 None:intergenic 25.0%
!!! TTTGCTCATATGTTTTATTG+GGG + chr8_3:2460753-2460772 Msa1269250:intron 25.0%
! ATCTCATGCATGATTAATAA+TGG + chr8_3:2460970-2460989 Msa1269250:intron 25.0%
! AAAAAAAAGTTCATGGGAAT+TGG + chr8_3:2461063-2461082 Msa1269250:intron 25.0%
!! TTGAAAAGTACACTAACATA+TGG - chr8_3:2461119-2461138 None:intergenic 25.0%
!!! TATTCTTATAAGTGTTGGTA+TGG + chr8_3:2461206-2461225 Msa1269250:intron 25.0%
! GCTTATAATTAACAGATTTG+GGG + chr8_3:2461398-2461417 Msa1269250:intron 25.0%
! ATGTTGAAAGTTGAAATCTA+AGG - chr8_3:2461539-2461558 None:intergenic 25.0%
!! CTATTTGGTATTTTACTCAA+GGG - chr8_3:2461705-2461724 None:intergenic 25.0%
!! TCTATTTGGTATTTTACTCA+AGG - chr8_3:2461706-2461725 None:intergenic 25.0%
! TGAACAAGAAGATATCTATT+TGG - chr8_3:2461720-2461739 None:intergenic 25.0%
! AAATAGATATCTTCTTGTTC+AGG + chr8_3:2461719-2461738 Msa1269250:intron 25.0%
! AGATTGAGATACTATATAAG+AGG - chr8_3:2461821-2461840 None:intergenic 25.0%
! ATCTCAATCTACAACATATA+TGG + chr8_3:2461831-2461850 Msa1269250:CDS 25.0%
! CATTTGACCAATATGATATA+CGG + chr8_3:2462068-2462087 Msa1269250:intron 25.0%
!!! CTTATTTTCATAAGTTCTCT+AGG + chr8_3:2462181-2462200 Msa1269250:intron 25.0%
!! ATTTTCCATTGACATTATCT+TGG + chr8_3:2462667-2462686 Msa1269250:intron 25.0%
! TTCAAAAATAACCTTACCTA+CGG + chr8_3:2462735-2462754 Msa1269250:intron 25.0%
!! AAATAGTCCAACTAATTTGT+TGG - chr8_3:2462786-2462805 None:intergenic 25.0%
!!! AAATTGAGATGAGGTTTTAT+TGG - chr8_3:2462935-2462954 None:intergenic 25.0%
! AATATGGAAAAATTGAGATG+AGG - chr8_3:2462944-2462963 None:intergenic 25.0%
!!! ACATTTTCAGCTTCTAAAAA+TGG + chr8_3:2463078-2463097 Msa1269250:intron 25.0%
!!! CTTTTGTTTTTCGTATCATT+TGG + chr8_3:2463149-2463168 Msa1269250:intron 25.0%
! CATGTACTTCATATATGTTA+AGG - chr8_3:2463661-2463680 None:intergenic 25.0%
!! AATATCAATTTTCGTACAAG+TGG + chr8_3:2463785-2463804 Msa1269250:intron 25.0%
!! TCAAAATGGATACTATTTTG+AGG - chr8_3:2463811-2463830 None:intergenic 25.0%
!!! AAGATAATTTATTTTCAGGC+AGG - chr8_3:2464077-2464096 None:intergenic 25.0%
!!! GGGAAAGATAATTTATTTTC+AGG - chr8_3:2464081-2464100 None:intergenic 25.0%
! GAAAATAAATTATCTTTCCC+TGG + chr8_3:2464081-2464100 Msa1269250:intron 25.0%
! AAATTACAGTTCGTTGTAAA+TGG - chr8_3:2464208-2464227 None:intergenic 25.0%
! CCAAAGATTAAAATGTTTGA+AGG - chr8_3:2464408-2464427 None:intergenic 25.0%
!!! CCTTCAAACATTTTAATCTT+TGG + chr8_3:2464405-2464424 Msa1269250:intron 25.0%
!! ATCTTTGGAAAGAAGATAAA+TGG + chr8_3:2464420-2464439 Msa1269250:intron 25.0%
! AACATCGATACAATAATGTA+AGG - chr8_3:2465090-2465109 None:intergenic 25.0%
! CAATATTCTTTAAACGATGA+AGG - chr8_3:2465724-2465743 None:intergenic 25.0%
! CTTCATCGTTTAAAGAATAT+TGG + chr8_3:2465722-2465741 Msa1269250:CDS 25.0%
!!! CACATTATTTTAGTTACTTG+AGG + chr8_3:2465900-2465919 Msa1269250:intron 25.0%
!! AAGATTCTAAGGATAGAAAA+CGG + chr8_3:2465978-2465997 Msa1269250:intron 25.0%
!!! AATTTGTATTTTTTCCATGC+AGG + chr8_3:2466030-2466049 Msa1269250:intron 25.0%
!! GATGGATATTTCATCATTTT+AGG + chr8_3:2466118-2466137 Msa1269250:CDS 25.0%
! AAAATCAATGTTGTCAATTG+TGG - chr8_3:2466916-2466935 None:intergenic 25.0%
! ATGATAATTGTGATGTATCA+AGG - chr8_3:2466974-2466993 None:intergenic 25.0%
!! TATTTTGCAATGAAATGACA+AGG - chr8_3:2467156-2467175 None:intergenic 25.0%
!! TGTTCTTTGTTTGAAATTTC+AGG + chr8_3:2467198-2467217 Msa1269250:intron 25.0%
!! TAAAACTGGTTTCAAAGAAT+TGG - chr8_3:2467299-2467318 None:intergenic 25.0%
! TATAGAAAAGCCAGAATAAA+GGG - chr8_3:2467376-2467395 None:intergenic 25.0%
! ATAAGTTTAACCTTATTAGG+AGG + chr8_3:2467401-2467420 Msa1269250:three_prime_UTR 25.0%
! TAAGTTTAACCTTATTAGGA+GGG + chr8_3:2467402-2467421 Msa1269250:three_prime_UTR 25.0%
!!! TTCTTTTAGTTCCATGAGTT+AGG + chr8_3:2460222-2460241 Msa1269250:five_prime_UTR 30.0%
GGAACTCATTGAATTGATTA+TGG - chr8_3:2460403-2460422 None:intergenic 30.0%
TTTGTTGAGAGTCTTAAATG+AGG - chr8_3:2460424-2460443 None:intergenic 30.0%
AGAATTTATGAGGATGATGA+TGG - chr8_3:2460470-2460489 None:intergenic 30.0%
!!! GGTGGTGAATTTTTTTATCT+TGG + chr8_3:2460774-2460793 Msa1269250:intron 30.0%
! ATGTCTTCAATTAGAAGTGT+TGG + chr8_3:2460928-2460947 Msa1269250:intron 30.0%
! TTAATAATGGCTGCATGTTT+TGG + chr8_3:2460983-2461002 Msa1269250:intron 30.0%
TGAATTGGGATTTACTAAGA+GGG + chr8_3:2461325-2461344 Msa1269250:intron 30.0%
TTCAACAACCATTAGAAGAA+AGG - chr8_3:2461353-2461372 None:intergenic 30.0%
TGAACAATAAGCACTATGTT+TGG - chr8_3:2461443-2461462 None:intergenic 30.0%
! AACATTGATAATTAGTGCTC+TGG + chr8_3:2461498-2461517 Msa1269250:intron 30.0%
TTAGTTAATGTTCAACCCAA+CGG - chr8_3:2461606-2461625 None:intergenic 30.0%
TCAATCTACAACATATATGG+AGG + chr8_3:2461834-2461853 Msa1269250:CDS 30.0%
AAGATATCTAATCTCTTGTG+TGG + chr8_3:2461961-2461980 Msa1269250:CDS 30.0%
!! TTTCATAAGTTCTCTAGGAT+AGG + chr8_3:2462186-2462205 Msa1269250:intron 30.0%
CCTCTATGTGATGAATAATT+CGG + chr8_3:2462557-2462576 Msa1269250:CDS 30.0%
ATGAATAATTCGGTATGCTT+TGG + chr8_3:2462567-2462586 Msa1269250:intron 30.0%
CTTGTGAACATTAAGAACTA+AGG + chr8_3:2462637-2462656 Msa1269250:intron 30.0%
TCAAAAATAACCTTACCTAC+GGG + chr8_3:2462736-2462755 Msa1269250:intron 30.0%
TATGTTGCCAACAAATTAGT+TGG + chr8_3:2462776-2462795 Msa1269250:intron 30.0%
! TTGATCTTTCAATGTTTTCC+GGG - chr8_3:2463047-2463066 None:intergenic 30.0%
! CTTGATCTTTCAATGTTTTC+CGG - chr8_3:2463048-2463067 None:intergenic 30.0%
GACAAAGTAGAATACTATCT+TGG + chr8_3:2463100-2463119 Msa1269250:intron 30.0%
ATATATGAAGTACATGTCCA+CGG + chr8_3:2463665-2463684 Msa1269250:CDS 30.0%
AAGGAAAAAGAAAATTACCG+TGG - chr8_3:2463729-2463748 None:intergenic 30.0%
TTGCTATGTAAGAAGTGAAA+AGG - chr8_3:2463748-2463767 None:intergenic 30.0%
! AGAATCTAATGTCTTGTTCA+AGG + chr8_3:2463855-2463874 Msa1269250:intron 30.0%
CATTGAGAAGATCTATGATA+TGG + chr8_3:2464009-2464028 Msa1269250:intron 30.0%
!! CTTTTAGGGATTGTTTAGAT+TGG + chr8_3:2464512-2464531 Msa1269250:intron 30.0%
! ATGTCATAAGCTATTTCCAT+AGG - chr8_3:2464548-2464567 None:intergenic 30.0%
AATAAGCTGAAAACAGCATA+TGG - chr8_3:2464573-2464592 None:intergenic 30.0%
!!! CAGATTTTTGAGATTGAGAA+TGG - chr8_3:2464832-2464851 None:intergenic 30.0%
CACACATCTGAATAATAGAA+TGG - chr8_3:2464863-2464882 None:intergenic 30.0%
CATTCTATTATTCAGATGTG+TGG + chr8_3:2464861-2464880 Msa1269250:intron 30.0%
TTTCTGTGATTAGAAGCAAA+TGG - chr8_3:2465218-2465237 None:intergenic 30.0%
TTGCTTCTAATCACAGAAAA+TGG + chr8_3:2465219-2465238 Msa1269250:intron 30.0%
CGTGGAGATACAATAAAAAA+GGG - chr8_3:2465342-2465361 None:intergenic 30.0%
TCGTGGAGATACAATAAAAA+AGG - chr8_3:2465343-2465362 None:intergenic 30.0%
TCCACTAACTATTACTTGAA+AGG + chr8_3:2465367-2465386 Msa1269250:intron 30.0%
! TCCTTTCAAGTAATAGTTAG+TGG - chr8_3:2465371-2465390 None:intergenic 30.0%
! CTCATATTAAGTGTTGTTCA+AGG - chr8_3:2465468-2465487 None:intergenic 30.0%
TTAATGCTCAATGTGAAAGA+TGG + chr8_3:2465598-2465617 Msa1269250:intron 30.0%
!! TGAGGACATAATTTGTTCTA+AGG + chr8_3:2465918-2465937 Msa1269250:intron 30.0%
! GTTTTCTATCCTTAGAATCT+TGG - chr8_3:2465979-2465998 None:intergenic 30.0%
!!! TTTCATCATTTTAGGACGTA+AGG + chr8_3:2466126-2466145 Msa1269250:intron 30.0%
ATTTCTCTAAGTATGATGTG+TGG + chr8_3:2466155-2466174 Msa1269250:intron 30.0%
ACATCGTAGGAATTCAAATT+TGG - chr8_3:2466202-2466221 None:intergenic 30.0%
AAATGAAAAGATCCATCTCA+AGG - chr8_3:2466228-2466247 None:intergenic 30.0%
!! TAGCAATTTGCTGGTATATA+AGG - chr8_3:2466365-2466384 None:intergenic 30.0%
CTTAGTTATTAGCAATTTGC+TGG - chr8_3:2466374-2466393 None:intergenic 30.0%
! CTACTATTTTGTTGCCAATA+AGG - chr8_3:2466426-2466445 None:intergenic 30.0%
TAGTAGAAGTTAGATTGTGA+TGG + chr8_3:2466440-2466459 Msa1269250:intron 30.0%
GTAGAAAACATTTACTCAGT+AGG - chr8_3:2466474-2466493 None:intergenic 30.0%
! CTTTTTATCAGGTACTAATG+CGG + chr8_3:2466493-2466512 Msa1269250:intron 30.0%
! AGGAGAATGATTTGTGTTTA+CGG - chr8_3:2467136-2467155 None:intergenic 30.0%
TAAAAAAGAACTGAAGAAGC+TGG + chr8_3:2467225-2467244 Msa1269250:CDS 30.0%
AATGGTATTTACTGTTCTGA+AGG - chr8_3:2467253-2467272 None:intergenic 30.0%
ACCATTCGAACATTATTTAC+TGG + chr8_3:2467267-2467286 Msa1269250:three_prime_UTR 30.0%
!!! CTTTGAAACCAGTTTTAAGA+TGG + chr8_3:2467302-2467321 Msa1269250:three_prime_UTR 30.0%
! GATTTTCACCATCTTAAAAC+TGG - chr8_3:2467313-2467332 None:intergenic 30.0%
AAAATAGAAGCCCTTTATTC+TGG + chr8_3:2467363-2467382 Msa1269250:three_prime_UTR 30.0%
CTATAGAAAAGCCAGAATAA+AGG - chr8_3:2467377-2467396 None:intergenic 30.0%
AAGTTTAACCTTATTAGGAG+GGG + chr8_3:2467403-2467422 Msa1269250:three_prime_UTR 30.0%
!!! ATTTTTTTCCCCTCCTAATA+AGG - chr8_3:2467414-2467433 None:intergenic 30.0%
GATGTCACAACAGTTAGTAT+TGG - chr8_3:2460192-2460211 None:intergenic 35.0%
!!! GTTTGGTTTTTCCTAACTCA+TGG - chr8_3:2460236-2460255 None:intergenic 35.0%
! TGTTTTTCACTTTCACACGT+TGG - chr8_3:2460266-2460285 None:intergenic 35.0%
!! TTATGAGGATGATGATGGAA+GGG - chr8_3:2460465-2460484 None:intergenic 35.0%
!! TTTATGAGGATGATGATGGA+AGG - chr8_3:2460466-2460485 None:intergenic 35.0%
!! TGGTTCTGAGAGAATTTATG+AGG - chr8_3:2460480-2460499 None:intergenic 35.0%
AATTGAGAGGAAGAGAAGAT+GGG - chr8_3:2460522-2460541 None:intergenic 35.0%
AAATTGAGAGGAAGAGAAGA+TGG - chr8_3:2460523-2460542 None:intergenic 35.0%
AGATGATGAACGAAATTGAG+AGG - chr8_3:2460535-2460554 None:intergenic 35.0%
!! AATTAGAAGTGTTGGTGCTA+CGG + chr8_3:2460936-2460955 Msa1269250:intron 35.0%
TTCATGGGAATTGGAAATTG+TGG + chr8_3:2461072-2461091 Msa1269250:intron 35.0%
TCATGGGAATTGGAAATTGT+GGG + chr8_3:2461073-2461092 Msa1269250:intron 35.0%
! ACAGACAGTTTGCAGATTTT+GGG + chr8_3:2461238-2461257 Msa1269250:intron 35.0%
TGAAATTGCATGGCATTGTT+AGG - chr8_3:2461300-2461319 None:intergenic 35.0%
!! ATTCAGCTTCTGAAATTGCA+TGG - chr8_3:2461310-2461329 None:intergenic 35.0%
TGCAATTTCAGAAGCTGAAT+TGG + chr8_3:2461310-2461329 Msa1269250:intron 35.0%
GCAATTTCAGAAGCTGAATT+GGG + chr8_3:2461311-2461330 Msa1269250:intron 35.0%
CTGAATTGGGATTTACTAAG+AGG + chr8_3:2461324-2461343 Msa1269250:intron 35.0%
TTGTTCAAAGCTGAGTTGTT+TGG + chr8_3:2461456-2461475 Msa1269250:intron 35.0%
CTTTCAACATTTCAGAACCT+AGG + chr8_3:2461549-2461568 Msa1269250:intron 35.0%
TTTACGCTCTTAATTGTCCT+AGG - chr8_3:2461569-2461588 None:intergenic 35.0%
! GGACAATTAAGAGCGTAAAA+AGG + chr8_3:2461570-2461589 Msa1269250:intron 35.0%
! AAGAGCGTAAAAAGGTCAAT+TGG + chr8_3:2461578-2461597 Msa1269250:intron 35.0%
GGAATAGTAAAGGAATGTCA+AGG - chr8_3:2462013-2462032 None:intergenic 35.0%
TCCTTTACTATTCCCTTTGT+AGG + chr8_3:2462019-2462038 Msa1269250:intron 35.0%
TCCTACAAAGGGAATAGTAA+AGG - chr8_3:2462023-2462042 None:intergenic 35.0%
ACGCAACTTAATCCTACAAA+GGG - chr8_3:2462034-2462053 None:intergenic 35.0%
TACGCAACTTAATCCTACAA+AGG - chr8_3:2462035-2462054 None:intergenic 35.0%
GGAACTTCCGTATATCATAT+TGG - chr8_3:2462078-2462097 None:intergenic 35.0%
TGATATACGGAAGTTCCTAT+AGG + chr8_3:2462081-2462100 Msa1269250:intron 35.0%
TTGAATGCTTAGTCTATTGC+TGG + chr8_3:2462315-2462334 Msa1269250:intron 35.0%
TGAATGCTTAGTCTATTGCT+GGG + chr8_3:2462316-2462335 Msa1269250:intron 35.0%
! ATTTATGGCGTTGAAATCCA+GGG + chr8_3:2462405-2462424 Msa1269250:CDS 35.0%
AAGTACTCCAGCAACAAATT+CGG - chr8_3:2462475-2462494 None:intergenic 35.0%
CCGAATTATTCATCACATAG+AGG - chr8_3:2462560-2462579 None:intergenic 35.0%
AGGTACCAAGATAATGTCAA+TGG - chr8_3:2462675-2462694 None:intergenic 35.0%
TCTGAGGAATTATTAGGAAC+GGG - chr8_3:2462970-2462989 None:intergenic 35.0%
! CTCTGAGGAATTATTAGGAA+CGG - chr8_3:2462971-2462990 None:intergenic 35.0%
! CTCTTCTCTGAGGAATTATT+AGG - chr8_3:2462976-2462995 None:intergenic 35.0%
AGCAATGGACATTCACAAAA+TGG + chr8_3:2462997-2463016 Msa1269250:CDS 35.0%
GCAATGGACATTCACAAAAT+GGG + chr8_3:2462998-2463017 Msa1269250:CDS 35.0%
CAATGGACATTCACAAAATG+GGG + chr8_3:2462999-2463018 Msa1269250:CDS 35.0%
!! TTTTTCGTATCATTTGGCTC+AGG + chr8_3:2463155-2463174 Msa1269250:intron 35.0%
CTAGTATACAAAATCAGTGC+CGG - chr8_3:2463188-2463207 None:intergenic 35.0%
!!! GCACTGATTTTGTATACTAG+CGG + chr8_3:2463188-2463207 Msa1269250:CDS 35.0%
!!! CACTGATTTTGTATACTAGC+GGG + chr8_3:2463189-2463208 Msa1269250:CDS 35.0%
CTTTCATGGATATGATGTAG+TGG - chr8_3:2463520-2463539 None:intergenic 35.0%
TATATGAAGTACATGTCCAC+GGG + chr8_3:2463666-2463685 Msa1269250:CDS 35.0%
ATTCCACTGACACTAAACTT+CGG - chr8_3:2463892-2463911 None:intergenic 35.0%
AGTTTAGTGTCAGTGGAATT+TGG + chr8_3:2463893-2463912 Msa1269250:CDS 35.0%
CATACTTACTCCAGTGAATA+CGG - chr8_3:2463974-2463993 None:intergenic 35.0%
CTTCGTATGATTATACTCCA+GGG - chr8_3:2464101-2464120 None:intergenic 35.0%
TCTTCGTATGATTATACTCC+AGG - chr8_3:2464102-2464121 None:intergenic 35.0%
CAACAAAGAACACCATCATA+TGG - chr8_3:2464136-2464155 None:intergenic 35.0%
ACGATAACCTTGTATTAACC+GGG - chr8_3:2464308-2464327 None:intergenic 35.0%
CACGATAACCTTGTATTAAC+CGG - chr8_3:2464309-2464328 None:intergenic 35.0%
AATACAAGGTTATCGTGCTA+TGG + chr8_3:2464312-2464331 Msa1269250:CDS 35.0%
GATTGGATTATTTGAGCCTA+TGG + chr8_3:2464529-2464548 Msa1269250:intron 35.0%
! AGCTATCTTTGAAGAGCTTA+TGG - chr8_3:2464597-2464616 None:intergenic 35.0%
ACTAAGTTGTTTATCCAAGC+AGG + chr8_3:2464736-2464755 Msa1269250:intron 35.0%
CTAAGTTGTTTATCCAAGCA+GGG + chr8_3:2464737-2464756 Msa1269250:intron 35.0%
!! GTATGTTGATTTACCATGCA+TGG + chr8_3:2464768-2464787 Msa1269250:intron 35.0%
TCAACCTGTTATGCAAGAAT+GGG + chr8_3:2464899-2464918 Msa1269250:CDS 35.0%
!! TCGATGTTTCTAGTTTGTCA+TGG + chr8_3:2465102-2465121 Msa1269250:intron 35.0%
GCATTGTCAAATCCATTGAA+TGG + chr8_3:2465124-2465143 Msa1269250:CDS 35.0%
! AATAGTTAGTGGAGTATTCG+TGG - chr8_3:2465360-2465379 None:intergenic 35.0%
TGTGAAAGATGGTGATATCT+TGG + chr8_3:2465609-2465628 Msa1269250:intron 35.0%
AGAATATTGGAAACTTCCTG+AGG + chr8_3:2465735-2465754 Msa1269250:CDS 35.0%
GTGCGATGTTATGATTGTAA+TGG - chr8_3:2465883-2465902 None:intergenic 35.0%
! TTTTTCCATGCAGGTAACAA+AGG + chr8_3:2466039-2466058 Msa1269250:intron 35.0%
AAGGAATCATTTACAGACGA+TGG + chr8_3:2466058-2466077 Msa1269250:CDS 35.0%
! CCTTGTTGGAAGATTCATTT+TGG - chr8_3:2466253-2466272 None:intergenic 35.0%
CCAAAATGAATCTTCCAACA+AGG + chr8_3:2466250-2466269 Msa1269250:intron 35.0%
GTTTCACCAAAAAAAGGAGA+GGG - chr8_3:2466332-2466351 None:intergenic 35.0%
TGTTTCACCAAAAAAAGGAG+AGG - chr8_3:2466333-2466352 None:intergenic 35.0%
GGTTGTGTTTCACCAAAAAA+AGG - chr8_3:2466338-2466357 None:intergenic 35.0%
TTTGCTGGTATATAAGGAGA+GGG - chr8_3:2466359-2466378 None:intergenic 35.0%
! ATTTGCTGGTATATAAGGAG+AGG - chr8_3:2466360-2466379 None:intergenic 35.0%
AATGCGGATATAATCAAGAG+TGG + chr8_3:2466509-2466528 Msa1269250:CDS 35.0%
TCAGTAATATTAGAGGCAAG+TGG + chr8_3:2466563-2466582 Msa1269250:intron 35.0%
TCTTTATCTTGCTTCTCCTT+TGG - chr8_3:2466767-2466786 None:intergenic 35.0%
GATAATTCTTCAAGGCTTAG+AGG - chr8_3:2466800-2466819 None:intergenic 35.0%
CCTTGAAGAATTATCCAACT+GGG + chr8_3:2466805-2466824 Msa1269250:CDS 35.0%
GTAAGGTGCAAGTTTATTCT+TGG - chr8_3:2466831-2466850 None:intergenic 35.0%
GAATAAACTTGCACCTTACA+AGG + chr8_3:2466832-2466851 Msa1269250:CDS 35.0%
TGTACTTCTTGTGCTAAGAA+TGG - chr8_3:2466871-2466890 None:intergenic 35.0%
! AGAATGATTTGTGTTTACGG+CGG - chr8_3:2467133-2467152 None:intergenic 35.0%
GCCAGTAAATAATGTTCGAA+TGG - chr8_3:2467271-2467290 None:intergenic 35.0%
! TGGTTTCAAAGAATTGGCTT+TGG - chr8_3:2467293-2467312 None:intergenic 35.0%
TTTCACTTTCACACGTTGGT+TGG - chr8_3:2460262-2460281 None:intergenic 40.0%
TCAAACGCTTACGTTGTTGT+TGG + chr8_3:2460319-2460338 Msa1269250:five_prime_UTR 40.0%
GGGTGTAAGAAGAAAAATGG+TGG - chr8_3:2460500-2460519 None:intergenic 40.0%
! TGGGGGTGTAAGAAGAAAAA+TGG - chr8_3:2460503-2460522 None:intergenic 40.0%
ATTGAGAGGAAGAGAAGATG+GGG - chr8_3:2460521-2460540 None:intergenic 40.0%
!! GCTCATATGTTTTATTGGGG+TGG + chr8_3:2460756-2460775 Msa1269250:intron 40.0%
! TTGGGGTGTCTTTACTTATG+AGG + chr8_3:2460821-2460840 Msa1269250:intron 40.0%
GTGTCTTTACTTATGAGGCA+TGG + chr8_3:2460826-2460845 Msa1269250:intron 40.0%
! GACAGACAGTTTGCAGATTT+TGG + chr8_3:2461237-2461256 Msa1269250:intron 40.0%
AGAGGGTTCCTTTCTTCTAA+TGG + chr8_3:2461342-2461361 Msa1269250:intron 40.0%
! ACTATGTTTGGAGTTCACGT+GGG - chr8_3:2461431-2461450 None:intergenic 40.0%
! AAAAGGTCAATTGGTTCCGT+TGG + chr8_3:2461587-2461606 Msa1269250:intron 40.0%
! AAAGGTCAATTGGTTCCGTT+GGG + chr8_3:2461588-2461607 Msa1269250:intron 40.0%
! TGCGGTGATTTTTCTCTACA+GGG + chr8_3:2461637-2461656 Msa1269250:intron 40.0%
! TTTTCTCTACAGGGTCATCT+TGG + chr8_3:2461646-2461665 Msa1269250:intron 40.0%
! CAGGCTTTATAATGCAGACA+TGG + chr8_3:2461738-2461757 Msa1269250:intron 40.0%
TTACAAGCAACTCATCTCGT+CGG + chr8_3:2461933-2461952 Msa1269250:CDS 40.0%
CTTGTGTGGAAATGATGTGA+AGG + chr8_3:2461975-2461994 Msa1269250:CDS 40.0%
GTTGGCAGATAAACTCCTAT+AGG - chr8_3:2462099-2462118 None:intergenic 40.0%
ACTGTTTGTGGAAACAGCTT+AGG + chr8_3:2462134-2462153 Msa1269250:intron 40.0%
! CATTTATGGCGTTGAAATCC+AGG + chr8_3:2462404-2462423 Msa1269250:CDS 40.0%
GTTGAAATCCAGGGAAATCT+TGG + chr8_3:2462414-2462433 Msa1269250:CDS 40.0%
!!! CTTTTTTCTTCCCGTAGGTA+AGG - chr8_3:2462749-2462768 None:intergenic 40.0%
ACCTACGGGAAGAAAAAAGT+TGG + chr8_3:2462750-2462769 Msa1269250:intron 40.0%
! TGATGCAGACAGTATTTTCC+CGG + chr8_3:2463026-2463045 Msa1269250:CDS 40.0%
TGTGTATGAACAACTCCCTT+AGG - chr8_3:2463227-2463246 None:intergenic 40.0%
TCATAAAGCATACCTGAGCA+AGG - chr8_3:2463259-2463278 None:intergenic 40.0%
TCCAAACCTTGACAAAAGCA+TGG + chr8_3:2463458-2463477 Msa1269250:CDS 40.0%
! CCAAACCTTGACAAAAGCAT+GGG + chr8_3:2463459-2463478 Msa1269250:CDS 40.0%
! CAAACCTTGACAAAAGCATG+GGG + chr8_3:2463460-2463479 Msa1269250:CDS 40.0%
! AAACCTTGACAAAAGCATGG+GGG + chr8_3:2463461-2463480 Msa1269250:CDS 40.0%
GTAAACCATTGAAAATCCCG+TGG - chr8_3:2463685-2463704 None:intergenic 40.0%
! CGGGATTTTCAATGGTTTAC+TGG + chr8_3:2463685-2463704 Msa1269250:CDS 40.0%
TCAGTGGAATTTGGAAGAGA+TGG + chr8_3:2463902-2463921 Msa1269250:CDS 40.0%
!! TCAGCTTTAGATCCTTCAGT+TGG - chr8_3:2463940-2463959 None:intergenic 40.0%
! ACTGAAGGATCTAAAGCTGA+TGG + chr8_3:2463940-2463959 Msa1269250:CDS 40.0%
ATCATACGAAGACCGCATAT+CGG + chr8_3:2464110-2464129 Msa1269250:intron 40.0%
ATTAACCGGGTGTACATAGT+TGG - chr8_3:2464295-2464314 None:intergenic 40.0%
ATGTACACCCGGTTAATACA+AGG + chr8_3:2464298-2464317 Msa1269250:CDS 40.0%
GGTAAATCAACATACCACTG+TGG - chr8_3:2464763-2464782 None:intergenic 40.0%
AATTGCAAGTGAACCATGCA+TGG - chr8_3:2464784-2464803 None:intergenic 40.0%
CATTCTTGCATAACAGGTTG+AGG - chr8_3:2464900-2464919 None:intergenic 40.0%
CTCAACCTGTTATGCAAGAA+TGG + chr8_3:2464898-2464917 Msa1269250:CDS 40.0%
GATTCCCATTCTTGCATAAC+AGG - chr8_3:2464906-2464925 None:intergenic 40.0%
ACTACGCAACTTCATCATTC+GGG - chr8_3:2465574-2465593 None:intergenic 40.0%
CACTACGCAACTTCATCATT+CGG - chr8_3:2465575-2465594 None:intergenic 40.0%
GAGCATGAGAATGAAGAAAC+TGG + chr8_3:2465673-2465692 Msa1269250:CDS 40.0%
TAACATTATGCAAGCACCTC+AGG - chr8_3:2465754-2465773 None:intergenic 40.0%
TGGTGCATCATAACATCGTA+AGG - chr8_3:2465863-2465882 None:intergenic 40.0%
ACAGACAGTCCAAGATTCTA+AGG + chr8_3:2465967-2465986 Msa1269250:intron 40.0%
TGATTCCTTTGTTACCTGCA+TGG - chr8_3:2466047-2466066 None:intergenic 40.0%
!! GACGATGGATACTTTAAGAC+TGG + chr8_3:2466073-2466092 Msa1269250:CDS 40.0%
GCAGTTACTACGGATAAAGA+TGG + chr8_3:2466100-2466119 Msa1269250:CDS 40.0%
TTCGTAGAGTCTCTATGACA+TGG - chr8_3:2466277-2466296 None:intergenic 40.0%
GACTCTACGAAGTTTCACAT+TGG + chr8_3:2466286-2466305 Msa1269250:intron 40.0%
AAAAAGGAGAGGGTTGTGTT+AGG - chr8_3:2466322-2466341 None:intergenic 40.0%
!!! ACACAACCCTCTCCTTTTTT+TGG + chr8_3:2466323-2466342 Msa1269250:intron 40.0%
! TGTCTCAGAATGTTGCGTTT+TGG + chr8_3:2466694-2466713 Msa1269250:CDS 40.0%
! GTCTCAGAATGTTGCGTTTT+GGG + chr8_3:2466695-2466714 Msa1269250:CDS 40.0%
ATTTCTCCGTAGTCTTTGTC+TGG - chr8_3:2466725-2466744 None:intergenic 40.0%
AATTCTTCAAGGCTTAGAGG+AGG - chr8_3:2466797-2466816 None:intergenic 40.0%
GCCTTGAAGAATTATCCAAC+TGG + chr8_3:2466804-2466823 Msa1269250:CDS 40.0%
CCCAGTTGGATAATTCTTCA+AGG - chr8_3:2466808-2466827 None:intergenic 40.0%
AAGTTTATTCTTGGCCCAGT+TGG - chr8_3:2466822-2466841 None:intergenic 40.0%
AACTTGCACCTTACAAGGTA+TGG + chr8_3:2466837-2466856 Msa1269250:intron 40.0%
CCATTCAACCATACCTTGTA+AGG - chr8_3:2466848-2466867 None:intergenic 40.0%
CCTTACAAGGTATGGTTGAA+TGG + chr8_3:2466845-2466864 Msa1269250:intron 40.0%
! ACTTTCACACGTTGGTTGGT+TGG - chr8_3:2460258-2460277 None:intergenic 45.0%
ACTGCAATTTGCGGTGAAGT+AGG - chr8_3:2460368-2460387 None:intergenic 45.0%
TTGAGAGGAAGAGAAGATGG+GGG - chr8_3:2460520-2460539 None:intergenic 45.0%
! CACTATGTTTGGAGTTCACG+TGG - chr8_3:2461432-2461451 None:intergenic 45.0%
! CTGCGGTGATTTTTCTCTAC+AGG + chr8_3:2461636-2461655 Msa1269250:intron 45.0%
GTTTCCACAAACAGTCTCAG+CGG - chr8_3:2462129-2462148 None:intergenic 45.0%
GAAATCCAGGGAAATCTTGG+TGG + chr8_3:2462417-2462436 Msa1269250:CDS 45.0%
AATCTTGGTGGAGCTCGAAT+AGG + chr8_3:2462429-2462448 Msa1269250:CDS 45.0%
AACAAATTCGGCAGACGGTT+TGG - chr8_3:2462463-2462482 None:intergenic 45.0%
!! GTACTTGCGACTTGGTTTAG+TGG + chr8_3:2462489-2462508 Msa1269250:CDS 45.0%
ACATAGAGGAGCTCTACTTC+TGG - chr8_3:2462546-2462565 None:intergenic 45.0%
!!! GCCAACTTTTTTCTTCCCGT+AGG - chr8_3:2462754-2462773 None:intergenic 45.0%
TATTAGGAACGGGCGGAATA+TGG - chr8_3:2462960-2462979 None:intergenic 45.0%
GAGGAATTATTAGGAACGGG+CGG - chr8_3:2462967-2462986 None:intergenic 45.0%
! ATTTGGCTCAGGTGAAGATC+CGG + chr8_3:2463166-2463185 Msa1269250:intron 45.0%
TTGTATACTAGCGGGACAAC+AGG + chr8_3:2463197-2463216 Msa1269250:CDS 45.0%
GGGACAACAGGTAAACCTAA+GGG + chr8_3:2463209-2463228 Msa1269250:CDS 45.0%
! CCCATGCTTTTGTCAAGGTT+TGG - chr8_3:2463462-2463481 None:intergenic 45.0%
! ATACCCCCATGCTTTTGTCA+AGG - chr8_3:2463467-2463486 None:intergenic 45.0%
! CATGTCCACGGGATTTTCAA+TGG + chr8_3:2463677-2463696 Msa1269250:CDS 45.0%
TTGCCGAAGTTTAGTGTCAG+TGG + chr8_3:2463886-2463905 Msa1269250:CDS 45.0%
CGTGAGTCATATCCAACTGA+AGG + chr8_3:2463925-2463944 Msa1269250:CDS 45.0%
! GGTGCTATAACCGTATTCAC+TGG + chr8_3:2463961-2463980 Msa1269250:CDS 45.0%
GGTTCATTCTCACAAGACCT+TGG + chr8_3:2464030-2464049 Msa1269250:intron 45.0%
ACCATCATATGGCCGATATG+CGG - chr8_3:2464125-2464144 None:intergenic 45.0%
AGGTTCCAACTATGTACACC+CGG + chr8_3:2464287-2464306 Msa1269250:intron 45.0%
CAAGAATGGGAATCCATCAC+TGG + chr8_3:2464912-2464931 Msa1269250:CDS 45.0%
CAATAAGCGATGTCCAGTGA+TGG - chr8_3:2464928-2464947 None:intergenic 45.0%
CATCACTGGACATCGCTTAT+TGG + chr8_3:2464926-2464945 Msa1269250:CDS 45.0%
CATCGCTTATTGGAGCGATA+TGG + chr8_3:2464936-2464955 Msa1269250:CDS 45.0%
! ACCAGGAAATGGTTTTCCGA+CGG - chr8_3:2465167-2465186 None:intergenic 45.0%
CTACGCAACTTCATCATTCG+GGG - chr8_3:2465573-2465592 None:intergenic 45.0%
! GGCTTTTCTGTATGCATGAC+AGG + chr8_3:2465630-2465649 Msa1269250:intron 45.0%
GAGAATGAAGAAACTGGAGC+TGG + chr8_3:2465679-2465698 Msa1269250:CDS 45.0%
GACTGGAGATGCAGTTACTA+CGG + chr8_3:2466090-2466109 Msa1269250:CDS 45.0%
CATCTCAAGGACAACATCGT+AGG - chr8_3:2466215-2466234 None:intergenic 45.0%
CTACGATGTTGTCCTTGAGA+TGG + chr8_3:2466213-2466232 Msa1269250:intron 45.0%
CTCTATGACATGGACCTTGT+TGG - chr8_3:2466267-2466286 None:intergenic 45.0%
GCGGATATAATCAAGAGTGG+TGG + chr8_3:2466512-2466531 Msa1269250:CDS 45.0%
GACAGTTGGATGCTGCAAAA+AGG - chr8_3:2466678-2466697 None:intergenic 45.0%
!! ACGCAACATTCTGAGACAGT+TGG - chr8_3:2466692-2466711 None:intergenic 45.0%
GGCTTACCAGACAAAGACTA+CGG + chr8_3:2466716-2466735 Msa1269250:CDS 45.0%
TTGTGCGATTATCGTGCCAA+AGG + chr8_3:2466748-2466767 Msa1269250:CDS 45.0%
TACCAACTCGACTAATCGTG+TGG + chr8_3:2467055-2467074 Msa1269250:CDS 45.0%
ACCAACTCGACTAATCGTGT+GGG + chr8_3:2467056-2467075 Msa1269250:CDS 45.0%
TGTGTTTACGGCGGCATATA+AGG - chr8_3:2467124-2467143 None:intergenic 45.0%
!!! TTTTGTTTAATTAAAAAAAA+TGG + chr8_3:2460705-2460724 Msa1269250:intron 5.0%
! CACACGTTGGTTGGTTGGTT+TGG - chr8_3:2460253-2460272 None:intergenic 50.0%
GCAATTTGCGGTGAAGTAGG+TGG - chr8_3:2460365-2460384 None:intergenic 50.0%
!! TGAGGATGATGATGGAAGGG+AGG - chr8_3:2460462-2460481 None:intergenic 50.0%
AAGCAAGAAGCTGCAGCTCA+TGG + chr8_3:2461874-2461893 Msa1269250:CDS 50.0%
AGTCTCAGCGGTGCTTATGT+TGG - chr8_3:2462117-2462136 None:intergenic 50.0%
CCAGCAACAAATTCGGCAGA+CGG - chr8_3:2462468-2462487 None:intergenic 50.0%
! TTGCTGGAGTACTTGCGACT+TGG + chr8_3:2462481-2462500 Msa1269250:CDS 50.0%
!! CTTGCGACTTGGTTTAGTGG+AGG + chr8_3:2462492-2462511 Msa1269250:CDS 50.0%
TCTGGATAGCTGAGTGCAAG+TGG - chr8_3:2462528-2462547 None:intergenic 50.0%
TCCTCAGAGAAGAGCAGCAA+TGG + chr8_3:2462982-2463001 Msa1269250:CDS 50.0%
TCCATTGCTGCTCTTCTCTG+AGG - chr8_3:2462986-2463005 None:intergenic 50.0%
CGGGACAACAGGTAAACCTA+AGG + chr8_3:2463208-2463227 Msa1269250:CDS 50.0%
!! ACACAGAAGCATCCTTGCTC+AGG + chr8_3:2463244-2463263 Msa1269250:CDS 50.0%
ACCGCATATCGGCCATATGA+TGG + chr8_3:2464121-2464140 Msa1269250:intron 50.0%
CGCAAGGAACTTGCGTCTAA+TGG + chr8_3:2464366-2464385 Msa1269250:CDS 50.0%
! AACAGGTTGAGGAAGTGCAG+AGG - chr8_3:2464889-2464908 None:intergenic 50.0%
ACCGTCGGAAAACCATTTCC+TGG + chr8_3:2465163-2465182 Msa1269250:CDS 50.0%
! TCCCACACGATTAGTCGAGT+TGG - chr8_3:2467060-2467079 None:intergenic 50.0%
GATGGAAGGGAGGCAGAAGA+GGG - chr8_3:2460452-2460471 None:intergenic 55.0%
TGATGGAAGGGAGGCAGAAG+AGG - chr8_3:2460453-2460472 None:intergenic 55.0%
AGCACCGCTGAGACTGTTTG+TGG + chr8_3:2462122-2462141 Msa1269250:intron 55.0%
GAGCTCCACCAAGATTTCCC+TGG - chr8_3:2462425-2462444 None:intergenic 55.0%
!! CCGTCTGCCGAATTTGTTGC+TGG + chr8_3:2462465-2462484 Msa1269250:CDS 55.0%
CTGCAAGCCACTTCAGCATC+TGG + chr8_3:2464343-2464362 Msa1269250:CDS 55.0%
TTATCCAAGCAGGGCCACAG+TGG + chr8_3:2464746-2464765 Msa1269250:intron 55.0%
GCTTTGCGCTCGCCATTCAA+TGG - chr8_3:2465139-2465158 None:intergenic 55.0%
TTGAATGGCGAGCGCAAAGC+AGG + chr8_3:2465139-2465158 Msa1269250:CDS 55.0%
ACGCTCCCTCGCAATGCAAT+GGG + chr8_3:2467081-2467100 Msa1269250:CDS 55.0%
CCTTCCCCATTGCATTGCGA+GGG - chr8_3:2467089-2467108 None:intergenic 55.0%
ACCTTCCCCATTGCATTGCG+AGG - chr8_3:2467090-2467109 None:intergenic 55.0%
TTACTGGCCCCTCTCTACGC+AGG + chr8_3:2463701-2463720 Msa1269250:CDS 60.0%
CGTGGAACCTGCGTAGAGAG+GGG - chr8_3:2463711-2463730 None:intergenic 60.0%
CCGTGGAACCTGCGTAGAGA+GGG - chr8_3:2463712-2463731 None:intergenic 60.0%
CCCTCTCTACGCAGGTTCCA+CGG + chr8_3:2463709-2463728 Msa1269250:CDS 60.0%
ACCGTGGAACCTGCGTAGAG+AGG - chr8_3:2463713-2463732 None:intergenic 60.0%
! GCTGAAGTGGCTTGCAGCTC+AGG - chr8_3:2464340-2464359 None:intergenic 60.0%
CCTTGCGCCAGATGCTGAAG+TGG - chr8_3:2464353-2464372 None:intergenic 60.0%
CCACTTCAGCATCTGGCGCA+AGG + chr8_3:2464350-2464369 Msa1269250:CDS 60.0%
CATACCACTGTGGCCCTGCT+TGG - chr8_3:2464753-2464772 None:intergenic 60.0%
GACGCTCCCTCGCAATGCAA+TGG + chr8_3:2467080-2467099 Msa1269250:CDS 60.0%
CGCTCCCTCGCAATGCAATG+GGG + chr8_3:2467082-2467101 Msa1269250:CDS 60.0%
CCCTCGCAATGCAATGGGGA+AGG + chr8_3:2467086-2467105 Msa1269250:CDS 60.0%
! GAGCGCAAAGCAGGCACCGT+CGG + chr8_3:2465148-2465167 Msa1269250:CDS 65.0%
Chromosome Type Strat End Strand Name
chr8_3 gene 2460189 2467578 2460189 ID=Msa1269250;Name=Msa1269250
chr8_3 mRNA 2460189 2467578 2460189 ID=Msa1269250-mRNA-1;Parent=Msa1269250;Name=Msa1269250-mRNA-1;_AED=0.10;_eAED=0.10;_QI=225|0.81|0.76|1|1|1|17|314|612
chr8_3 exon 2460189 2460561 2460189 ID=Msa1269250-mRNA-1:exon:727;Parent=Msa1269250-mRNA-1
chr8_3 exon 2461830 2461996 2461830 ID=Msa1269250-mRNA-1:exon:728;Parent=Msa1269250-mRNA-1
chr8_3 exon 2462399 2462578 2462399 ID=Msa1269250-mRNA-1:exon:729;Parent=Msa1269250-mRNA-1
chr8_3 exon 2462877 2463066 2462877 ID=Msa1269250-mRNA-1:exon:730;Parent=Msa1269250-mRNA-1
chr8_3 exon 2463177 2463265 2463177 ID=Msa1269250-mRNA-1:exon:731;Parent=Msa1269250-mRNA-1
chr8_3 exon 2463457 2463500 2463457 ID=Msa1269250-mRNA-1:exon:732;Parent=Msa1269250-mRNA-1
chr8_3 exon 2463613 2463730 2463613 ID=Msa1269250-mRNA-1:exon:733;Parent=Msa1269250-mRNA-1
chr8_3 exon 2463877 2463984 2463877 ID=Msa1269250-mRNA-1:exon:734;Parent=Msa1269250-mRNA-1
chr8_3 exon 2464289 2464387 2464289 ID=Msa1269250-mRNA-1:exon:735;Parent=Msa1269250-mRNA-1
chr8_3 exon 2464876 2464968 2464876 ID=Msa1269250-mRNA-1:exon:736;Parent=Msa1269250-mRNA-1
chr8_3 exon 2465115 2465192 2465115 ID=Msa1269250-mRNA-1:exon:737;Parent=Msa1269250-mRNA-1
chr8_3 exon 2465652 2465756 2465652 ID=Msa1269250-mRNA-1:exon:738;Parent=Msa1269250-mRNA-1
chr8_3 exon 2466052 2466142 2466052 ID=Msa1269250-mRNA-1:exon:739;Parent=Msa1269250-mRNA-1
chr8_3 exon 2466504 2466565 2466504 ID=Msa1269250-mRNA-1:exon:740;Parent=Msa1269250-mRNA-1
chr8_3 exon 2466686 2466853 2466686 ID=Msa1269250-mRNA-1:exon:741;Parent=Msa1269250-mRNA-1
chr8_3 exon 2467054 2467107 2467054 ID=Msa1269250-mRNA-1:exon:742;Parent=Msa1269250-mRNA-1
chr8_3 exon 2467220 2467578 2467220 ID=Msa1269250-mRNA-1:exon:743;Parent=Msa1269250-mRNA-1
chr8_3 five_prime_UTR 2460189 2460413 2460189 ID=Msa1269250-mRNA-1:five_prime_utr;Parent=Msa1269250-mRNA-1
chr8_3 CDS 2460414 2460561 2460414 ID=Msa1269250-mRNA-1:cds;Parent=Msa1269250-mRNA-1
chr8_3 CDS 2461830 2461996 2461830 ID=Msa1269250-mRNA-1:cds;Parent=Msa1269250-mRNA-1
chr8_3 CDS 2462399 2462578 2462399 ID=Msa1269250-mRNA-1:cds;Parent=Msa1269250-mRNA-1
chr8_3 CDS 2462877 2463066 2462877 ID=Msa1269250-mRNA-1:cds;Parent=Msa1269250-mRNA-1
chr8_3 CDS 2463177 2463265 2463177 ID=Msa1269250-mRNA-1:cds;Parent=Msa1269250-mRNA-1
chr8_3 CDS 2463457 2463500 2463457 ID=Msa1269250-mRNA-1:cds;Parent=Msa1269250-mRNA-1
chr8_3 CDS 2463613 2463730 2463613 ID=Msa1269250-mRNA-1:cds;Parent=Msa1269250-mRNA-1
chr8_3 CDS 2463877 2463984 2463877 ID=Msa1269250-mRNA-1:cds;Parent=Msa1269250-mRNA-1
chr8_3 CDS 2464289 2464387 2464289 ID=Msa1269250-mRNA-1:cds;Parent=Msa1269250-mRNA-1
chr8_3 CDS 2464876 2464968 2464876 ID=Msa1269250-mRNA-1:cds;Parent=Msa1269250-mRNA-1
chr8_3 CDS 2465115 2465192 2465115 ID=Msa1269250-mRNA-1:cds;Parent=Msa1269250-mRNA-1
chr8_3 CDS 2465652 2465756 2465652 ID=Msa1269250-mRNA-1:cds;Parent=Msa1269250-mRNA-1
chr8_3 CDS 2466052 2466142 2466052 ID=Msa1269250-mRNA-1:cds;Parent=Msa1269250-mRNA-1
chr8_3 CDS 2466504 2466565 2466504 ID=Msa1269250-mRNA-1:cds;Parent=Msa1269250-mRNA-1
chr8_3 CDS 2466686 2466853 2466686 ID=Msa1269250-mRNA-1:cds;Parent=Msa1269250-mRNA-1
chr8_3 CDS 2467054 2467107 2467054 ID=Msa1269250-mRNA-1:cds;Parent=Msa1269250-mRNA-1
chr8_3 CDS 2467220 2467264 2467220 ID=Msa1269250-mRNA-1:cds;Parent=Msa1269250-mRNA-1
chr8_3 three_prime_UTR 2467265 2467578 2467265 ID=Msa1269250-mRNA-1:three_prime_utr;Parent=Msa1269250-mRNA-1
Gene Sequence

>Msa1269250

ATGAGTTCCTCATTTAAGACTCTCAACAAACAATTCCCTCTTCTGCCTCCCTTCCATCATCATCCTCATAAATTCTCTCAGAACCACCATTTTTCTTCTTACACCCCCATCTTCTCTTCCTCTCAATTTCGTTCATCATCTTGCTCAATATCTCAATCTACAACATATATGGAGGTCTTCAAAGCAATTGCTAAGCAAGAAGCTGCAGCTCATGGTAGTGTTGCTATCAGAGCTGATCAGCAGAGTTATAGTTACAAGCAACTCATCTCGTCGGCACAGAAGATATCTAATCTCTTGTGTGGAAATGATGTGAAGTCAATCATTTATGGCGTTGAAATCCAGGGAAATCTTGGTGGAGCTCGAATAGGAATTGTAGCCAAACCGTCTGCCGAATTTGTTGCTGGAGTACTTGCGACTTGGTTTAGTGGAGGTGTTGCTGTTCCACTTGCACTCAGCTATCCAGAAGTAGAGCTCCTCTATGTGATGAATAATTCGGACGTGTCTGCAATACTGAGTACTGAAGATCATAGTGAACTAATGCAAAGCATTGCCAATAAAACCTCATCTCAATTTTTCCATATTCCGCCCGTTCCTAATAATTCCTCAGAGAAGAGCAGCAATGGACATTCACAAAATGGGGAAATTGATGCAGACAGTATTTTCCCGGAAAACATTGAAAGATCAAGTGAAGATCCGGCACTGATTTTGTATACTAGCGGGACAACAGGTAAACCTAAGGGAGTTGTTCATACACACAGAAGCATCCTTGCTCAGGTCCAAACCTTGACAAAAGCATGGGGGTATACGTCTGCTGATCATATATTTGCTCAAGATATGATTTGCGATATCTTTGTGATGTCTATCCTTAACATATATGAAGTACATGTCCACGGGATTTTCAATGGTTTACTGGCCCCTCTCTACGCAGGTTCCACGGTTGAATTTTTGCCGAAGTTTAGTGTCAGTGGAATTTGGAAGAGATGGCGTGAGTCATATCCAACTGAAGGATCTAAAGCTGATGGTGCTATAACCGTATTCACTGGAGTTCCAACTATGTACACCCGGTTAATACAAGGTTATCGTGCTATGGATCCTGAGCTGCAAGCCACTTCAGCATCTGGCGCAAGGAACTTGCGTCTAATGATGTGTGGATCCTCTGCACTTCCTCAACCTGTTATGCAAGAATGGGAATCCATCACTGGACATCGCTTATTGGAGCGATATGGCATGACTGAATTTGTCATGGCATTGTCAAATCCATTGAATGGCGAGCGCAAAGCAGGCACCGTCGGAAAACCATTTCCTGGTGTGCAGGTCAAGATTCTTGCAGATGAAGAGCATGAGAATGAAGAAACTGGAGCTGGTGAGCTTTGCGTTAAAAGCCCTTCATCGTTTAAAGAATATTGGAAACTTCCTGAGGTAACAAAGGAATCATTTACAGACGATGGATACTTTAAGACTGGAGATGCAGTTACTACGGATAAAGATGGATATTTCATCATTTTAGGACGTACTAATGCGGATATAATCAAGAGTGGTGGCTATAAGCTTTCTGCATTAGAAATTGAATCACATCCAACTGTCTCAGAATGTTGCGTTTTGGGCTTACCAGACAAAGACTACGGAGAAATTGTTTGTGCGATTATCGTGCCAAAGGAGAAGCAAGATAAAGAGTCAAAACCTCCTCTAAGCCTTGAAGAATTATCCAACTGGGCCAAGAATAAACTTGCACCTTACAAGATACCAACTCGACTAATCGTGTGGGAGACGCTCCCTCGCAATGCAATGGGGAAGGTAAATAAAAAAGAACTGAAGAAGCTGGTGCCTTCAGAACAGTAA
Protein sequence

>Msa1269250

MSSSFKTLNKQFPLLPPFHHHPHKFSQNHHFSSYTPIFSSSQFRSSSCSISQSTTYMEVFKAIAKQEAAAHGSVAIRADQQSYSYKQLISSAQKISNLLCGNDVKSIIYGVEIQGNLGGARIGIVAKPSAEFVAGVLATWFSGGVAVPLALSYPEVELLYVMNNSDVSAILSTEDHSELMQSIANKTSSQFFHIPPVPNNSSEKSSNGHSQNGEIDADSIFPENIERSSEDPALILYTSGTTGKPKGVVHTHRSILAQVQTLTKAWGYTSADHIFAQDMICDIFVMSILNIYEVHVHGIFNGLLAPLYAGSTVEFLPKFSVSGIWKRWRESYPTEGSKADGAITVFTGVPTMYTRLIQGYRAMDPELQATSASGARNLRLMMCGSSALPQPVMQEWESITGHRLLERYGMTEFVMALSNPLNGERKAGTVGKPFPGVQVKILADEEHENEETGAGELCVKSPSSFKEYWKLPEVTKESFTDDGYFKTGDAVTTDKDGYFIILGRTNADIIKSGGYKLSALEIESHPTVSECCVLGLPDKDYGEIVCAIIVPKEKQDKESKPPLSLEELSNWAKNKLAPYKIPTRLIVWETLPRNAMGKVNKKELKKLVPSEQ*