Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0167860 | XP_013468487.1 | 100.000 | 164 | 0 | 0 | 1 | 164 | 1 | 164 | 1.27e-116 | 337 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0167860 | sp|Q43291|RL211_ARATH | 81.098 | 164 | 31 | 0 | 1 | 164 | 1 | 164 | 3.52e-100 | 288 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0167860 | A0A2K3LGM4 | 100.000 | 164 | 0 | 0 | 1 | 164 | 1 | 164 | 6.06e-117 | 337 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0001760 | Msa0167860 | 0.877629 | 5.392478e-69 | -8.615850e-47 |
| Msa0003330 | Msa0167860 | 0.892187 | 2.000532e-74 | -8.615850e-47 |
| Msa0016350 | Msa0167860 | 0.806516 | 7.921775e-50 | -8.615850e-47 |
| Msa0027590 | Msa0167860 | 0.911276 | 7.300885e-83 | -8.615850e-47 |
| Msa0037230 | Msa0167860 | 0.813134 | 2.984324e-51 | -8.615850e-47 |
| Msa0040220 | Msa0167860 | 0.826793 | 2.231934e-54 | -8.615850e-47 |
| Msa0042510 | Msa0167860 | 0.823914 | 1.071561e-53 | -8.615850e-47 |
| Msa0050900 | Msa0167860 | 0.805953 | 1.040688e-49 | -8.615850e-47 |
| Msa0072570 | Msa0167860 | 0.843256 | 1.567429e-58 | -8.615850e-47 |
| Msa0075350 | Msa0167860 | 0.849151 | 3.886666e-60 | -8.615850e-47 |
| Msa0079560 | Msa0167860 | 0.829113 | 6.172372e-55 | -8.615850e-47 |
| Msa0086160 | Msa0167860 | 0.840773 | 7.104412e-58 | -8.615850e-47 |
| Msa0087910 | Msa0167860 | 0.863229 | 2.888898e-64 | -8.615850e-47 |
| Msa0089540 | Msa0167860 | 0.802146 | 6.444167e-49 | -8.615850e-47 |
| Msa0114600 | Msa0167860 | 0.892879 | 1.055776e-74 | -8.615850e-47 |
| Msa0123290 | Msa0167860 | 0.846127 | 2.639728e-59 | -8.615850e-47 |
| Msa0127230 | Msa0167860 | 0.813754 | 2.180902e-51 | -8.615850e-47 |
| Msa0128330 | Msa0167860 | 0.919618 | 3.595321e-87 | -8.615850e-47 |
| Msa0128750 | Msa0167860 | 0.824660 | 7.157633e-54 | -8.615850e-47 |
| Msa0132460 | Msa0167860 | 0.880852 | 3.902215e-70 | -8.615850e-47 |
| Msa0134580 | Msa0167860 | 0.879301 | 1.393179e-69 | -8.615850e-47 |
| Msa0136400 | Msa0167860 | 0.828380 | 9.284015e-55 | -8.615850e-47 |
| Msa0146610 | Msa0167860 | 0.844342 | 8.020584e-59 | -8.615850e-47 |
| Msa0167860 | Msa0168320 | 0.870697 | 1.200036e-66 | -8.615850e-47 |
| Msa0167860 | Msa0174580 | 0.918479 | 1.481095e-86 | -8.615850e-47 |
| Msa0167860 | Msa0182050 | 0.884252 | 2.247143e-71 | -8.615850e-47 |
| Msa0167860 | Msa0182100 | 0.884367 | 2.037856e-71 | -8.615850e-47 |
| Msa0167860 | Msa0183840 | 0.855404 | 6.453081e-62 | -8.615850e-47 |
| Msa0167860 | Msa0186740 | 0.800802 | 1.214913e-48 | -8.615850e-47 |
| Msa0167860 | Msa0187810 | 0.860067 | 2.674531e-63 | -8.615850e-47 |
| Msa0167860 | Msa0188740 | 0.808042 | 3.760636e-50 | -8.615850e-47 |
| Msa0167860 | Msa0191450 | 0.883636 | 3.793271e-71 | -8.615850e-47 |
| Msa0167860 | Msa0191550 | 0.897043 | 2.060167e-76 | -8.615850e-47 |
| Msa0167860 | Msa0192300 | 0.901546 | 2.402670e-78 | -8.615850e-47 |
| Msa0167860 | Msa0194940 | 0.899140 | 2.660137e-77 | -8.615850e-47 |
| Msa0167860 | Msa0195030 | 0.835747 | 1.401808e-56 | -8.615850e-47 |
| Msa0167860 | Msa0210330 | 0.805769 | 1.137399e-49 | -8.615850e-47 |
| Msa0167860 | Msa0225350 | 0.826054 | 3.348352e-54 | -8.615850e-47 |
| Msa0167860 | Msa0233550 | 0.852890 | 3.429153e-61 | -8.615850e-47 |
| Msa0167860 | Msa0234850 | 0.819376 | 1.199663e-52 | -8.615850e-47 |
| Msa0167860 | Msa0234900 | 0.800588 | 1.343461e-48 | -8.615850e-47 |
| Msa0167860 | Msa0235050 | 0.859748 | 3.336677e-63 | -8.615850e-47 |
| Msa0167860 | Msa0237180 | 0.836235 | 1.053673e-56 | -8.615850e-47 |
| Msa0167860 | Msa0239420 | 0.890300 | 1.115963e-73 | -8.615850e-47 |
| Msa0167860 | Msa0270160 | 0.832735 | 7.976813e-56 | -8.615850e-47 |
| Msa0167860 | Msa0274940 | 0.821531 | 3.842385e-53 | -8.615850e-47 |
| Msa0167860 | Msa0277600 | 0.917836 | 3.267200e-86 | -8.615850e-47 |
| Msa0167860 | Msa0281330 | 0.891318 | 4.433094e-74 | -8.615850e-47 |
| Msa0167860 | Msa0281370 | 0.915124 | 8.541979e-85 | -8.615850e-47 |
| Msa0167860 | Msa0301250 | 0.901879 | 1.712736e-78 | -8.615850e-47 |
| Msa0167860 | Msa0312210 | 0.843688 | 1.201719e-58 | -8.615850e-47 |
| Msa0167860 | Msa0313060 | 0.920509 | 1.168996e-87 | -8.615850e-47 |
| Msa0167860 | Msa0315430 | 0.937128 | 5.727064e-98 | -8.615850e-47 |
| Msa0167860 | Msa0315660 | 0.831530 | 1.584419e-55 | -8.615850e-47 |
| Msa0167860 | Msa0340560 | 0.839683 | 1.368629e-57 | -8.615850e-47 |
| Msa0167860 | Msa0346090 | 0.801488 | 8.794869e-49 | -8.615850e-47 |
| Msa0167860 | Msa0369410 | 0.845785 | 3.270996e-59 | -8.615850e-47 |
| Msa0167860 | Msa0371490 | 0.866375 | 2.984692e-65 | -8.615850e-47 |
| Msa0167860 | Msa0376850 | 0.843186 | 1.635526e-58 | -8.615850e-47 |
| Msa0167860 | Msa0377370 | 0.863084 | 3.202758e-64 | -8.615850e-47 |
| Msa0167860 | Msa0377520 | 0.894810 | 1.736694e-75 | -8.615850e-47 |
| Msa0167860 | Msa0382670 | 0.836049 | 1.175023e-56 | -8.615850e-47 |
| Msa0167860 | Msa0383690 | 0.800051 | 1.727419e-48 | -8.615850e-47 |
| Msa0167860 | Msa0388520 | 0.827306 | 1.682889e-54 | -8.615850e-47 |
| Msa0167860 | Msa0416470 | 0.811563 | 6.577935e-51 | -8.615850e-47 |
| Msa0167860 | Msa0419710 | 0.862496 | 4.862870e-64 | -8.615850e-47 |
| Msa0167860 | Msa0426090 | 0.891065 | 5.582367e-74 | -8.615850e-47 |
| Msa0167860 | Msa0426250 | 0.898301 | 6.064990e-77 | -8.615850e-47 |
| Msa0167860 | Msa0432750 | 0.810371 | 1.191609e-50 | -8.615850e-47 |
| Msa0167860 | Msa0433060 | 0.801478 | 8.835209e-49 | -8.615850e-47 |
| Msa0167860 | Msa0450150 | 0.890485 | 9.440634e-74 | -8.615850e-47 |
| Msa0167860 | Msa0472480 | 0.884428 | 1.933274e-71 | -8.615850e-47 |
| Msa0167860 | Msa0473390 | 0.800085 | 1.700342e-48 | -8.615850e-47 |
| Msa0167860 | Msa0479980 | 0.811828 | 5.758161e-51 | -8.615850e-47 |
| Msa0167860 | Msa0481520 | 0.890826 | 6.929909e-74 | -8.615850e-47 |
| Msa0167860 | Msa0481800 | 0.807789 | 4.257047e-50 | -8.615850e-47 |
| Msa0167860 | Msa0482560 | 0.831563 | 1.555264e-55 | -8.615850e-47 |
| Msa0167860 | Msa0484730 | 0.800161 | 1.641231e-48 | -8.615850e-47 |
| Msa0167860 | Msa0485220 | 0.801971 | 7.001011e-49 | -8.615850e-47 |
| Msa0167860 | Msa0511760 | 0.860854 | 1.544927e-63 | -8.615850e-47 |
| Msa0167860 | Msa0516830 | 0.843740 | 1.163189e-58 | -8.615850e-47 |
| Msa0167860 | Msa0517480 | 0.891567 | 3.530589e-74 | -8.615850e-47 |
| Msa0167860 | Msa0529900 | 0.853548 | 2.222211e-61 | -8.615850e-47 |
| Msa0167860 | Msa0547920 | 0.915103 | 8.761138e-85 | -8.615850e-47 |
| Msa0167860 | Msa0550420 | 0.836585 | 8.582654e-57 | -8.615850e-47 |
| Msa0167860 | Msa0550490 | 0.814163 | 1.771661e-51 | -8.615850e-47 |
| Msa0167860 | Msa0573550 | 0.943596 | 9.037908e-103 | -8.615850e-47 |
| Msa0167860 | Msa0574780 | 0.902794 | 6.733412e-79 | -8.615850e-47 |
| Msa0167860 | Msa0578010 | 0.822555 | 2.224907e-53 | -8.615850e-47 |
| Msa0167860 | Msa0579830 | 0.894148 | 3.238800e-75 | -8.615850e-47 |
| Msa0167860 | Msa0582070 | 0.804954 | 1.685501e-49 | -8.615850e-47 |
| Msa0167860 | Msa0585570 | 0.825992 | 3.463360e-54 | -8.615850e-47 |
| Msa0167860 | Msa0597240 | 0.883864 | 3.126078e-71 | -8.615850e-47 |
| Msa0167860 | Msa0602900 | 0.903505 | 3.235191e-79 | -8.615850e-47 |
| Msa0167860 | Msa0605600 | 0.828878 | 7.035431e-55 | -8.615850e-47 |
| Msa0167860 | Msa0605890 | 0.919634 | 3.522327e-87 | -8.615850e-47 |
| Msa0167860 | Msa0609120 | 0.826174 | 3.136026e-54 | -8.615850e-47 |
| Msa0167860 | Msa0619230 | 0.906745 | 1.068542e-80 | -8.615850e-47 |
| Msa0167860 | Msa0621190 | 0.829235 | 5.765312e-55 | -8.615850e-47 |
| Msa0167860 | Msa0622230 | 0.835238 | 1.885175e-56 | -8.615850e-47 |
| Msa0167860 | Msa0643960 | 0.904077 | 1.787744e-79 | -8.615850e-47 |
| Msa0167860 | Msa0649890 | 0.893902 | 4.076316e-75 | -8.615850e-47 |
| Msa0167860 | Msa0653060 | 0.809913 | 1.496021e-50 | -8.615850e-47 |
| Msa0167860 | Msa0656450 | 0.837215 | 5.927432e-57 | -8.615850e-47 |
| Msa0167860 | Msa0663400 | 0.837803 | 4.188905e-57 | -8.615850e-47 |
| Msa0167860 | Msa0681220 | 0.834201 | 3.436366e-56 | -8.615850e-47 |
| Msa0167860 | Msa0686550 | 0.878496 | 2.678644e-69 | -8.615850e-47 |
| Msa0167860 | Msa0691760 | 0.822914 | 1.835556e-53 | -8.615850e-47 |
| Msa0167860 | Msa0694400 | 0.925916 | 9.577550e-91 | -8.615850e-47 |
| Msa0167860 | Msa0704860 | 0.890799 | 7.106318e-74 | -8.615850e-47 |
| Msa0167860 | Msa0705800 | 0.810029 | 1.412507e-50 | -8.615850e-47 |
| Msa0167860 | Msa0708630 | 0.881188 | 2.954046e-70 | -8.615850e-47 |
| Msa0167860 | Msa0741510 | 0.862577 | 4.592897e-64 | -8.615850e-47 |
| Msa0167860 | Msa0748350 | 0.864010 | 1.653319e-64 | -8.615850e-47 |
| Msa0167860 | Msa0749000 | 0.856121 | 3.985225e-62 | -8.615850e-47 |
| Msa0167860 | Msa0758420 | 0.841364 | 4.970235e-58 | -8.615850e-47 |
| Msa0167860 | Msa0788380 | 0.863328 | 2.693533e-64 | -8.615850e-47 |
| Msa0167860 | Msa0790450 | 0.851800 | 7.010175e-61 | -8.615850e-47 |
| Msa0167860 | Msa0796490 | 0.864737 | 9.804686e-65 | -8.615850e-47 |
| Msa0167860 | Msa0822580 | 0.825764 | 3.923048e-54 | -8.615850e-47 |
| Msa0167860 | Msa0834220 | 0.836339 | 9.918618e-57 | -8.615850e-47 |
| Msa0167860 | Msa0835190 | 0.818355 | 2.047059e-52 | -8.615850e-47 |
| Msa0167860 | Msa0838070 | 0.835846 | 1.322750e-56 | -8.615850e-47 |
| Msa0167860 | Msa0902220 | 0.826380 | 2.800348e-54 | -8.615850e-47 |
| Msa0167860 | Msa0902730 | 0.865001 | 8.100599e-65 | -8.615850e-47 |
| Msa0167860 | Msa0927910 | 0.837618 | 4.673292e-57 | -8.615850e-47 |
| Msa0167860 | Msa0929680 | 0.857592 | 1.470001e-62 | -8.615850e-47 |
| Msa0167860 | Msa0929700 | 0.950566 | 1.262996e-108 | -8.615850e-47 |
| Msa0167860 | Msa0930100 | 0.825015 | 5.901984e-54 | -8.615850e-47 |
| Msa0167860 | Msa0930360 | 0.814806 | 1.277316e-51 | -8.615850e-47 |
| Msa0167860 | Msa0930790 | 0.844079 | 9.437996e-59 | -8.615850e-47 |
| Msa0167860 | Msa0930890 | 0.906369 | 1.596434e-80 | -8.615850e-47 |
| Msa0167860 | Msa0978470 | 0.834132 | 3.576541e-56 | -8.615850e-47 |
| Msa0167860 | Msa1019110 | 0.846012 | 2.836213e-59 | -8.615850e-47 |
| Msa0167860 | Msa1025200 | 0.804280 | 2.329796e-49 | -8.615850e-47 |
| Msa0167860 | Msa1025220 | 0.809636 | 1.715468e-50 | -8.615850e-47 |
| Msa0167860 | Msa1037290 | 0.831992 | 1.218581e-55 | -8.615850e-47 |
| Msa0167860 | Msa1040160 | 0.852824 | 3.583145e-61 | -8.615850e-47 |
| Msa0167860 | Msa1041680 | 0.832239 | 1.058817e-55 | -8.615850e-47 |
| Msa0167860 | Msa1047020 | 0.806658 | 7.391041e-50 | -8.615850e-47 |
| Msa0167860 | Msa1050100 | 0.817826 | 2.696165e-52 | -8.615850e-47 |
| Msa0167860 | Msa1054280 | 0.835772 | 1.381362e-56 | -8.615850e-47 |
| Msa0167860 | Msa1068660 | 0.813134 | 2.984324e-51 | -8.615850e-47 |
| Msa0167860 | Msa1079910 | 0.842937 | 1.905782e-58 | -8.615850e-47 |
| Msa0167860 | Msa1082050 | 0.845694 | 3.461719e-59 | -8.615850e-47 |
| Msa0167860 | Msa1082170 | 0.832276 | 1.037008e-55 | -8.615850e-47 |
| Msa0167860 | Msa1083370 | 0.840671 | 7.555441e-58 | -8.615850e-47 |
| Msa0167860 | Msa1085850 | 0.833360 | 5.577275e-56 | -8.615850e-47 |
| Msa0167860 | Msa1093500 | 0.865885 | 4.266367e-65 | -8.615850e-47 |
| Msa0167860 | Msa1116940 | 0.814276 | 1.673282e-51 | -8.615850e-47 |
| Msa0167860 | Msa1124850 | 0.811024 | 8.611199e-51 | -8.615850e-47 |
| Msa0167860 | Msa1125900 | 0.811506 | 6.767152e-51 | -8.615850e-47 |
| Msa0167860 | Msa1126100 | 0.800450 | 1.432860e-48 | -8.615850e-47 |
| Msa0167860 | Msa1126520 | 0.826114 | 3.239353e-54 | -8.615850e-47 |
| Msa0167860 | Msa1126690 | 0.881017 | 3.404411e-70 | -8.615850e-47 |
| Msa0167860 | Msa1130680 | 0.806495 | 8.003133e-50 | -8.615850e-47 |
| Msa0167860 | Msa1131030 | 0.838543 | 2.702317e-57 | -8.615850e-47 |
| Msa0167860 | Msa1147670 | 0.804784 | 1.829186e-49 | -8.615850e-47 |
| Msa0167860 | Msa1156830 | 0.839756 | 1.310222e-57 | -8.615850e-47 |
| Msa0167860 | Msa1163320 | 0.801539 | 8.586700e-49 | -8.615850e-47 |
| Msa0167860 | Msa1164150 | 0.864435 | 1.218936e-64 | -8.615850e-47 |
| Msa0167860 | Msa1165640 | 0.836481 | 9.125166e-57 | -8.615850e-47 |
| Msa0167860 | Msa1166570 | 0.832393 | 9.700191e-56 | -8.615850e-47 |
| Msa0167860 | Msa1167540 | 0.809379 | 1.948454e-50 | -8.615850e-47 |
| Msa0167860 | Msa1180000 | 0.877146 | 7.937929e-69 | -8.615850e-47 |
| Msa0167860 | Msa1186030 | 0.892213 | 1.952460e-74 | -8.615850e-47 |
| Msa0167860 | Msa1206240 | 0.826005 | 3.439576e-54 | -8.615850e-47 |
| Msa0167860 | Msa1208330 | 0.836952 | 6.920629e-57 | -8.615850e-47 |
| Msa0167860 | Msa1235950 | 0.900578 | 6.364620e-78 | -8.615850e-47 |
| Msa0167860 | Msa1235980 | 0.905963 | 2.462118e-80 | -8.615850e-47 |
| Msa0167860 | Msa1237040 | 0.880658 | 4.579046e-70 | -8.615850e-47 |
| Msa0167860 | Msa1240270 | 0.847870 | 8.794117e-60 | -8.615850e-47 |
| Msa0167860 | Msa1255850 | 0.809979 | 1.447411e-50 | -8.615850e-47 |
| Msa0167860 | Msa1258540 | 0.876184 | 1.708303e-68 | -8.615850e-47 |
| Msa0167860 | Msa1269250 | -0.822279 | 2.578583e-53 | -8.615850e-47 |
| Msa0167860 | Msa1270640 | 0.866563 | 2.601990e-65 | -8.615850e-47 |
| Msa0167860 | Msa1270710 | 0.865766 | 4.654332e-65 | -8.615850e-47 |
| Msa0167860 | Msa1278130 | 0.830478 | 2.870732e-55 | -8.615850e-47 |
| Msa0167860 | Msa1284060 | 0.825100 | 5.633386e-54 | -8.615850e-47 |
| Msa0167860 | Msa1296090 | 0.825688 | 4.088998e-54 | -8.615850e-47 |
| Msa0167860 | Msa1311400 | 0.844417 | 7.660044e-59 | -8.615850e-47 |
| Msa0167860 | Msa1316100 | 0.862665 | 4.314567e-64 | -8.615850e-47 |
| Msa0167860 | Msa1317390 | 0.879876 | 8.712900e-70 | -8.615850e-47 |
| Msa0167860 | Msa1330730 | 0.858986 | 5.650420e-63 | -8.615850e-47 |
| Msa0167860 | Msa1333370 | 0.805347 | 1.394710e-49 | -8.615850e-47 |
| Msa0167860 | Msa1341780 | 0.843622 | 1.251176e-58 | -8.615850e-47 |
| Msa0167860 | Msa1344160 | 0.837138 | 6.201767e-57 | -8.615850e-47 |
| Msa0167860 | Msa1344190 | 0.830962 | 2.185286e-55 | -8.615850e-47 |
| Msa0167860 | Msa1351020 | 0.937303 | 4.313421e-98 | -8.615850e-47 |
| Msa0167860 | Msa1351910 | 0.840104 | 1.062740e-57 | -8.615850e-47 |
| Msa0167860 | Msa1353300 | 0.829917 | 3.936750e-55 | -8.615850e-47 |
| Msa0167860 | Msa1358710 | 0.818406 | 1.992660e-52 | -8.615850e-47 |
| Msa0167860 | Msa1363910 | 0.803998 | 2.667022e-49 | -8.615850e-47 |
| Msa0167860 | Msa1367540 | 0.827922 | 1.197257e-54 | -8.615850e-47 |
| Msa0167860 | Msa1368920 | 0.834763 | 2.483250e-56 | -8.615850e-47 |
| Msa0167860 | Msa1371410 | 0.815888 | 7.340616e-52 | -8.615850e-47 |
| Msa0167860 | Msa1374480 | 0.806136 | 9.525735e-50 | -8.615850e-47 |
| Msa0167860 | Msa1385480 | 0.919319 | 5.221634e-87 | -8.615850e-47 |
| Msa0167860 | Msa1387750 | 0.811901 | 5.551087e-51 | -8.615850e-47 |
| Msa0167860 | Msa1390760 | 0.906265 | 1.784774e-80 | -8.615850e-47 |
| Msa0167860 | Msa1397660 | 0.803183 | 3.935943e-49 | -8.615850e-47 |
| Msa0167860 | Msa1407550 | 0.893985 | 3.771278e-75 | -8.615850e-47 |
| Msa0167860 | Msa1413570 | 0.844876 | 5.760042e-59 | -8.615850e-47 |
| Msa0167860 | Msa1415620 | 0.814808 | 1.275675e-51 | -8.615850e-47 |
| Msa0167860 | Msa1421510 | 0.811287 | 7.551647e-51 | -8.615850e-47 |
| Msa0167860 | Msa1424570 | 0.849276 | 3.588239e-60 | -8.615850e-47 |
| Msa0167860 | Msa1425070 | 0.848282 | 6.769070e-60 | -8.615850e-47 |
| Msa0167860 | Msa1432310 | 0.889971 | 1.500782e-73 | -8.615850e-47 |
| Msa0167860 | Msa1441220 | -0.842757 | 2.127984e-58 | -8.615850e-47 |
| Msa0167860 | Msa1446410 | 0.910631 | 1.508411e-82 | -8.615850e-47 |
| Msa0167860 | Msa1446510 | 0.830504 | 2.830290e-55 | -8.615850e-47 |
| Msa0167860 | Msa1449160 | 0.805468 | 1.315648e-49 | -8.615850e-47 |
| Msa0167860 | Msa1450560 | 0.855034 | 8.269452e-62 | -8.615850e-47 |
| Msa0167860 | Msa1453530 | 0.807283 | 5.452091e-50 | -8.615850e-47 |
| Msa0167860 | Msa1463570 | 0.915819 | 3.738761e-85 | -8.615850e-47 |
| Msa0167860 | Msa1465700 | 0.905997 | 2.374725e-80 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0167860 | MtrunA17_Chr1g0183851 | 100.000 | 164 | 0 | 0 | 1 | 164 | 1 | 164 | 1.17e-120 | 337 |
| Msa0167860 | MtrunA17_Chr7g0268461 | 99.390 | 164 | 1 | 0 | 1 | 164 | 1 | 164 | 1.81e-120 | 336 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0167860 | AT1G09590.1 | 81.098 | 164 | 31 | 0 | 1 | 164 | 1 | 164 | 3.58e-101 | 288 |
| Msa0167860 | AT1G09690.1 | 81.098 | 164 | 31 | 0 | 1 | 164 | 1 | 164 | 3.58e-101 | 288 |
| Msa0167860 | AT1G57660.1 | 80.488 | 164 | 32 | 0 | 1 | 164 | 1 | 164 | 1.08e-100 | 286 |
| Msa0167860 | AT1G57860.1 | 80.488 | 164 | 32 | 0 | 1 | 164 | 1 | 164 | 1.08e-100 | 286 |
Find 68 sgRNAs with CRISPR-Local
Find 205 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TATGTCGACATTAGAGTTAA+TGG | 0.335175 | 1_4:-49921923 | Msa0167860:CDS |
| TCCACCATGAAACCAGGTTT+GGG | 0.345744 | 1_4:+49920778 | None:intergenic |
| AACTCCTCAGTGCACCTTGA+TGG | 0.353770 | 1_4:+49920889 | None:intergenic |
| AGATCATTAACGACATCATA+TGG | 0.366035 | 1_4:+49920724 | None:intergenic |
| GGGGCCCTCTGGCTTGCGCT+TGG | 0.369033 | 1_4:+49920798 | None:intergenic |
| TTCCACCATGAAACCAGGTT+TGG | 0.392778 | 1_4:+49920777 | None:intergenic |
| GGGCCCCAAACCTGGTTTCA+TGG | 0.399375 | 1_4:-49920782 | Msa0167860:CDS |
| TTAACGACATCATATGGAAT+TGG | 0.408404 | 1_4:+49920730 | None:intergenic |
| CTTGTTGACTTCGACACCAA+TGG | 0.410846 | 1_4:+49921826 | None:intergenic |
| AAACCAGGTTTGGGGCCCTC+TGG | 0.418683 | 1_4:+49920787 | None:intergenic |
| CTGATATTTCATAAATTTGA+AGG | 0.428221 | 1_4:+49920589 | None:intergenic |
| ACGGTCGTACCGGTCGTGTC+TGG | 0.430669 | 1_4:-49921865 | Msa0167860:CDS |
| CTATTCGAGCAATTCTTACA+TGG | 0.434332 | 1_4:-49920503 | Msa0167860:three_prime_UTR |
| AAGCCAGAGGGCCCCAAACC+TGG | 0.445982 | 1_4:-49920790 | Msa0167860:CDS |
| CTCTCCCTTGGCCTTAGCCT+CGG | 0.448320 | 1_4:+49920831 | None:intergenic |
| GGTGCTTATCACCTCTCCCT+TGG | 0.453810 | 1_4:+49920819 | None:intergenic |
| CTCTCGTCCCTTCCGCAAGA+AGG | 0.461875 | 1_4:-49921993 | Msa0167860:CDS |
| AGACTGCATATTGTTGTGCT+TGG | 0.473076 | 1_4:-49920655 | Msa0167860:three_prime_UTR |
| TTCGACACCAATGGCCCGCT+TGG | 0.477602 | 1_4:+49921835 | None:intergenic |
| AGTCCTGAGGTAGGTGGCTA+AGG | 0.478683 | 1_4:+49921961 | None:intergenic |
| CGAGGCTAAGGCCAAGGGAG+AGG | 0.486454 | 1_4:-49920830 | Msa0167860:CDS |
| GGGACGAGAGAATGAATCTC+TGG | 0.494698 | 1_4:+49922006 | None:intergenic |
| AGCACCAAGCGCAAGCCAGA+GGG | 0.504695 | 1_4:-49920802 | Msa0167860:CDS |
| GCTCGAAATCACACTAGTCT+AGG | 0.507136 | 1_4:+49922100 | None:intergenic |
| TATTGTTCCCTTCTTGCGGA+AGG | 0.508429 | 1_4:+49921985 | None:intergenic |
| TCAATTGAAGGCCGAGGCTA+AGG | 0.510816 | 1_4:-49920842 | Msa0167860:CDS |
| AATGTCACCAAGCGGGCCAT+TGG | 0.521717 | 1_4:-49921842 | Msa0167860:CDS |
| AAATTCTACCACGGTCGTAC+CGG | 0.524822 | 1_4:-49921875 | Msa0167860:CDS |
| GATCAAGAATGATCAATTGA+AGG | 0.525684 | 1_4:-49920854 | Msa0167860:CDS |
| GAAAACATGCCTGCAGGTCA+TGG | 0.528675 | 1_4:-49922043 | Msa0167860:exon |
| GATCGTAAACCATGACCTGC+AGG | 0.529368 | 1_4:+49922034 | None:intergenic |
| CATGGTGGAAGGTGCTACAT+TGG | 0.534415 | 1_4:-49920764 | Msa0167860:CDS |
| ATTGTTCCCTTCTTGCGGAA+GGG | 0.538504 | 1_4:+49921986 | None:intergenic |
| AGAGAATGAATCTCTGGTGC+GGG | 0.544173 | 1_4:+49922012 | None:intergenic |
| TCTCGTCCCTTCCGCAAGAA+GGG | 0.545142 | 1_4:-49921992 | Msa0167860:CDS |
| TAGCCTTAGCCACCTACCTC+AGG | 0.549870 | 1_4:-49921964 | Msa0167860:CDS |
| GAATGATCAATTGAAGGCCG+AGG | 0.551548 | 1_4:-49920848 | Msa0167860:CDS |
| AGGCTATTGTTCCCTTCTTG+CGG | 0.554250 | 1_4:+49921981 | None:intergenic |
| AAGCACCAAGCGCAAGCCAG+AGG | 0.557087 | 1_4:-49920803 | Msa0167860:CDS |
| GAAGAAGAAAACATGCCTGC+AGG | 0.557795 | 1_4:-49922049 | Msa0167860:exon |
| TGGAGCATGTTATGCCATCA+AGG | 0.559210 | 1_4:-49920903 | Msa0167860:CDS |
| GAAGGCCGAGGCTAAGGCCA+AGG | 0.560874 | 1_4:-49920836 | Msa0167860:CDS |
| TGATATTTCATAAATTTGAA+GGG | 0.567429 | 1_4:+49920590 | None:intergenic |
| TGTCTGGAATGTCACCAAGC+GGG | 0.572072 | 1_4:-49921849 | Msa0167860:CDS |
| GCACCTTCCACCATGAAACC+AGG | 0.576804 | 1_4:+49920772 | None:intergenic |
| TAGTCTAGGAGAAAGAAGAA+AGG | 0.585081 | 1_4:+49922114 | None:intergenic |
| AAACCTGGTTTCATGGTGGA+AGG | 0.589005 | 1_4:-49920775 | Msa0167860:CDS |
| GCACTGAGGAGTTCAGATTG+AGG | 0.599052 | 1_4:-49920879 | Msa0167860:CDS |
| GGTGACATTCCAGACACGAC+CGG | 0.600537 | 1_4:+49921856 | None:intergenic |
| ATGGCATAACATGCTCCACT+CGG | 0.618716 | 1_4:+49920908 | None:intergenic |
| GAGAGAATGAATCTCTGGTG+CGG | 0.619187 | 1_4:+49922011 | None:intergenic |
| GATGTCGTTAATGATCTCAA+AGG | 0.621805 | 1_4:-49920718 | Msa0167860:CDS |
| GTTAATGGAGCTGTGCACAA+AGG | 0.632022 | 1_4:-49921908 | Msa0167860:CDS |
| GTCGTTAATGATCTCAAAGG+AGG | 0.636972 | 1_4:-49920715 | Msa0167860:CDS |
| AAGGCCGAGGCTAAGGCCAA+GGG | 0.643263 | 1_4:-49920835 | Msa0167860:CDS |
| TAGACTAGTGTGATTTCGAG+CGG | 0.649887 | 1_4:-49922098 | Msa0167860:five_prime_UTR |
| CCACCATGAAACCAGGTTTG+GGG | 0.653619 | 1_4:+49920779 | None:intergenic |
| GTGTCTGGAATGTCACCAAG+CGG | 0.655012 | 1_4:-49921850 | Msa0167860:CDS |
| GTGATAAGTCCTGAGGTAGG+TGG | 0.662852 | 1_4:+49921955 | None:intergenic |
| CGACCGTGGTAGAATTTGTG+CGG | 0.677873 | 1_4:+49921881 | None:intergenic |
| CACCGATGTGATAAGTCCTG+AGG | 0.683027 | 1_4:+49921948 | None:intergenic |
| GATGTGATAAGTCCTGAGGT+AGG | 0.683685 | 1_4:+49921952 | None:intergenic |
| CCCCAAACCTGGTTTCATGG+TGG | 0.684233 | 1_4:-49920779 | Msa0167860:CDS |
| AGACACGACCGGTACGACCG+TGG | 0.690324 | 1_4:+49921867 | None:intergenic |
| GAAGAGGATTCATGTCCGAG+TGG | 0.705446 | 1_4:-49920923 | Msa0167860:CDS |
| TACCTCAGGACTTATCACAT+CGG | 0.727991 | 1_4:-49921950 | Msa0167860:CDS |
| ATGCCGCACAAATTCTACCA+CGG | 0.741255 | 1_4:-49921884 | Msa0167860:CDS |
| TATGCCATCAAGGTGCACTG+AGG | 0.765204 | 1_4:-49920893 | Msa0167860:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TGATATTTCATAAATTTGAA+GGG | + | chr1_4:49922034-49922053 | None:intergenic | 15.0% |
| !! | TGATATTTCATAAATTTGAA+GGG | + | chr1_4:49922034-49922053 | None:intergenic | 15.0% |
| !!! | ACATAAATGAAAGTATTTGT+AGG | + | chr1_4:49921333-49921352 | None:intergenic | 20.0% |
| !!! | GAAGAATTTTGTGTTAAATA+TGG | + | chr1_4:49921476-49921495 | None:intergenic | 20.0% |
| !!! | CAAAATTCTTCTAAGTTTTT+AGG | - | chr1_4:49921485-49921504 | Msa0167860:intron | 20.0% |
| !! | CTGATATTTCATAAATTTGA+AGG | + | chr1_4:49922035-49922054 | None:intergenic | 20.0% |
| !!! | ACATAAATGAAAGTATTTGT+AGG | + | chr1_4:49921333-49921352 | None:intergenic | 20.0% |
| !!! | GAAGAATTTTGTGTTAAATA+TGG | + | chr1_4:49921476-49921495 | None:intergenic | 20.0% |
| !!! | CAAAATTCTTCTAAGTTTTT+AGG | - | chr1_4:49921485-49921504 | Msa0167860:intron | 20.0% |
| !! | CTGATATTTCATAAATTTGA+AGG | + | chr1_4:49922035-49922054 | None:intergenic | 20.0% |
| ! | TTTGCTTTAGTAGTATATTC+AGG | - | chr1_4:49920981-49921000 | Msa0167860:intron | 25.0% |
| ! | TCAAACAACAAAATGAATCA+AGG | + | chr1_4:49921059-49921078 | None:intergenic | 25.0% |
| !!! | TTGTTTGAGTTTTGTTTAGA+TGG | - | chr1_4:49921071-49921090 | Msa0167860:intron | 25.0% |
| ! | AGTTGGAAAACAAAAACTTA+GGG | + | chr1_4:49921252-49921271 | None:intergenic | 25.0% |
| ! | AAGTTGGAAAACAAAAACTT+AGG | + | chr1_4:49921253-49921272 | None:intergenic | 25.0% |
| !! | ATTCGAGTCTTTTAATAAGT+TGG | + | chr1_4:49921269-49921288 | None:intergenic | 25.0% |
| ! | AGGAACTAAACATGATAAAA+TGG | + | chr1_4:49921313-49921332 | None:intergenic | 25.0% |
| !! | ACTTGACATGATGTTTTATA+TGG | - | chr1_4:49921443-49921462 | Msa0167860:intron | 25.0% |
| !!! | TTCTAAGTTTTTAGGTCTTA+AGG | - | chr1_4:49921493-49921512 | Msa0167860:intron | 25.0% |
| !!! | AATGTTGCTATTTATGTTTC+AGG | - | chr1_4:49921656-49921675 | Msa0167860:intron | 25.0% |
| ! | TTTGCTTTAGTAGTATATTC+AGG | - | chr1_4:49920981-49921000 | Msa0167860:intron | 25.0% |
| ! | TCAAACAACAAAATGAATCA+AGG | + | chr1_4:49921059-49921078 | None:intergenic | 25.0% |
| !!! | TTGTTTGAGTTTTGTTTAGA+TGG | - | chr1_4:49921071-49921090 | Msa0167860:intron | 25.0% |
| ! | AGTTGGAAAACAAAAACTTA+GGG | + | chr1_4:49921252-49921271 | None:intergenic | 25.0% |
| ! | AAGTTGGAAAACAAAAACTT+AGG | + | chr1_4:49921253-49921272 | None:intergenic | 25.0% |
| !! | ATTCGAGTCTTTTAATAAGT+TGG | + | chr1_4:49921269-49921288 | None:intergenic | 25.0% |
| ! | AGGAACTAAACATGATAAAA+TGG | + | chr1_4:49921313-49921332 | None:intergenic | 25.0% |
| !! | ACTTGACATGATGTTTTATA+TGG | - | chr1_4:49921443-49921462 | Msa0167860:intron | 25.0% |
| !!! | TTCTAAGTTTTTAGGTCTTA+AGG | - | chr1_4:49921493-49921512 | Msa0167860:intron | 25.0% |
| !!! | AATGTTGCTATTTATGTTTC+AGG | - | chr1_4:49921656-49921675 | Msa0167860:intron | 25.0% |
| TATGTCGACATTAGAGTTAA+TGG | - | chr1_4:49920698-49920717 | Msa0167860:exon | 30.0% | |
| ACAAATATATGTGACGTGAT+AGG | - | chr1_4:49920873-49920892 | Msa0167860:CDS | 30.0% | |
| !!! | TGAGTTTTGTTTAGATGGAT+TGG | - | chr1_4:49921076-49921095 | Msa0167860:intron | 30.0% |
| ATAAGCAGTAAGCTATCTTA+GGG | + | chr1_4:49921126-49921145 | None:intergenic | 30.0% | |
| TATAAGCAGTAAGCTATCTT+AGG | + | chr1_4:49921127-49921146 | None:intergenic | 30.0% | |
| CATCAAAATCACCATATATG+AGG | - | chr1_4:49921404-49921423 | Msa0167860:intron | 30.0% | |
| CTCTTCAAAAACCTCATATA+TGG | + | chr1_4:49921418-49921437 | None:intergenic | 30.0% | |
| TTAATTTCCAGAGAATCTCT+TGG | - | chr1_4:49921540-49921559 | Msa0167860:intron | 30.0% | |
| AATCTCTTGGATAGAATGTA+TGG | - | chr1_4:49921553-49921572 | Msa0167860:intron | 30.0% | |
| CAATATCTTTACAAGCAAAG+CGG | + | chr1_4:49921621-49921640 | None:intergenic | 30.0% | |
| !! | TGCTATTTATGTTTCAGGTT+AGG | - | chr1_4:49921661-49921680 | Msa0167860:intron | 30.0% |
| GATCAAGAATGATCAATTGA+AGG | - | chr1_4:49921767-49921786 | Msa0167860:intron | 30.0% | |
| TTAACGACATCATATGGAAT+TGG | + | chr1_4:49921894-49921913 | None:intergenic | 30.0% | |
| AGATCATTAACGACATCATA+TGG | + | chr1_4:49921900-49921919 | None:intergenic | 30.0% | |
| TATGTCGACATTAGAGTTAA+TGG | - | chr1_4:49920698-49920717 | Msa0167860:exon | 30.0% | |
| ACAAATATATGTGACGTGAT+AGG | - | chr1_4:49920873-49920892 | Msa0167860:CDS | 30.0% | |
| !!! | TGAGTTTTGTTTAGATGGAT+TGG | - | chr1_4:49921076-49921095 | Msa0167860:intron | 30.0% |
| ATAAGCAGTAAGCTATCTTA+GGG | + | chr1_4:49921126-49921145 | None:intergenic | 30.0% | |
| TATAAGCAGTAAGCTATCTT+AGG | + | chr1_4:49921127-49921146 | None:intergenic | 30.0% | |
| CATCAAAATCACCATATATG+AGG | - | chr1_4:49921404-49921423 | Msa0167860:intron | 30.0% | |
| CTCTTCAAAAACCTCATATA+TGG | + | chr1_4:49921418-49921437 | None:intergenic | 30.0% | |
| TTAATTTCCAGAGAATCTCT+TGG | - | chr1_4:49921540-49921559 | Msa0167860:intron | 30.0% | |
| AATCTCTTGGATAGAATGTA+TGG | - | chr1_4:49921553-49921572 | Msa0167860:intron | 30.0% | |
| CAATATCTTTACAAGCAAAG+CGG | + | chr1_4:49921621-49921640 | None:intergenic | 30.0% | |
| !! | TGCTATTTATGTTTCAGGTT+AGG | - | chr1_4:49921661-49921680 | Msa0167860:intron | 30.0% |
| GATCAAGAATGATCAATTGA+AGG | - | chr1_4:49921767-49921786 | Msa0167860:intron | 30.0% | |
| TTAACGACATCATATGGAAT+TGG | + | chr1_4:49921894-49921913 | None:intergenic | 30.0% | |
| AGATCATTAACGACATCATA+TGG | + | chr1_4:49921900-49921919 | None:intergenic | 30.0% | |
| TAGTCTAGGAGAAAGAAGAA+AGG | + | chr1_4:49920510-49920529 | None:intergenic | 35.0% | |
| ! | GTTTTCTTCTTCTGCTTCTA+GGG | + | chr1_4:49920564-49920583 | None:intergenic | 35.0% |
| ! | TGTTTTCTTCTTCTGCTTCT+AGG | + | chr1_4:49920565-49920584 | None:intergenic | 35.0% |
| AGTAAGCTATCTTAGGGATA+AGG | + | chr1_4:49921120-49921139 | None:intergenic | 35.0% | |
| ACAAAAACTTAGGGCATGTT+TGG | + | chr1_4:49921243-49921262 | None:intergenic | 35.0% | |
| TCCAATTTCTCACTTGGAAT+TGG | - | chr1_4:49921359-49921378 | Msa0167860:intron | 35.0% | |
| TCCAATTCCAAGTGAGAAAT+TGG | + | chr1_4:49921363-49921382 | None:intergenic | 35.0% | |
| ATTCTATCCAAGAGATTCTC+TGG | + | chr1_4:49921550-49921569 | None:intergenic | 35.0% | |
| ! | AGGTTAGGAACAAGATTTTG+AGG | - | chr1_4:49921676-49921695 | Msa0167860:intron | 35.0% |
| GATGTCGTTAATGATCTCAA+AGG | - | chr1_4:49921903-49921922 | Msa0167860:CDS | 35.0% | |
| CTATTCGAGCAATTCTTACA+TGG | - | chr1_4:49922118-49922137 | Msa0167860:five_prime_UTR | 35.0% | |
| TAGTCTAGGAGAAAGAAGAA+AGG | + | chr1_4:49920510-49920529 | None:intergenic | 35.0% | |
| ! | GTTTTCTTCTTCTGCTTCTA+GGG | + | chr1_4:49920564-49920583 | None:intergenic | 35.0% |
| ! | TGTTTTCTTCTTCTGCTTCT+AGG | + | chr1_4:49920565-49920584 | None:intergenic | 35.0% |
| AGTAAGCTATCTTAGGGATA+AGG | + | chr1_4:49921120-49921139 | None:intergenic | 35.0% | |
| ACAAAAACTTAGGGCATGTT+TGG | + | chr1_4:49921243-49921262 | None:intergenic | 35.0% | |
| TCCAATTTCTCACTTGGAAT+TGG | - | chr1_4:49921359-49921378 | Msa0167860:intron | 35.0% | |
| TCCAATTCCAAGTGAGAAAT+TGG | + | chr1_4:49921363-49921382 | None:intergenic | 35.0% | |
| ATTCTATCCAAGAGATTCTC+TGG | + | chr1_4:49921550-49921569 | None:intergenic | 35.0% | |
| ! | AGGTTAGGAACAAGATTTTG+AGG | - | chr1_4:49921676-49921695 | Msa0167860:intron | 35.0% |
| GATGTCGTTAATGATCTCAA+AGG | - | chr1_4:49921903-49921922 | Msa0167860:CDS | 35.0% | |
| CTATTCGAGCAATTCTTACA+TGG | - | chr1_4:49922118-49922137 | Msa0167860:five_prime_UTR | 35.0% | |
| TAGACTAGTGTGATTTCGAG+CGG | - | chr1_4:49920523-49920542 | Msa0167860:three_prime_UTR | 40.0% | |
| TACCTCAGGACTTATCACAT+CGG | - | chr1_4:49920671-49920690 | Msa0167860:three_prime_UTR | 40.0% | |
| ATGTGACGTGATAGGTGTTA+TGG | - | chr1_4:49920881-49920900 | Msa0167860:CDS | 40.0% | |
| CAAGTCTCCAATTTCTCACT+TGG | - | chr1_4:49921353-49921372 | Msa0167860:intron | 40.0% | |
| !! | GGAACAAGATTTTGAGGAAG+AGG | - | chr1_4:49921682-49921701 | Msa0167860:intron | 40.0% |
| GTCGTTAATGATCTCAAAGG+AGG | - | chr1_4:49921906-49921925 | Msa0167860:CDS | 40.0% | |
| AGACTGCATATTGTTGTGCT+TGG | - | chr1_4:49921966-49921985 | Msa0167860:CDS | 40.0% | |
| GCAATTCTTACATGGTCACA+AGG | - | chr1_4:49922126-49922145 | Msa0167860:five_prime_UTR | 40.0% | |
| TAGACTAGTGTGATTTCGAG+CGG | - | chr1_4:49920523-49920542 | Msa0167860:three_prime_UTR | 40.0% | |
| TACCTCAGGACTTATCACAT+CGG | - | chr1_4:49920671-49920690 | Msa0167860:three_prime_UTR | 40.0% | |
| ATGTGACGTGATAGGTGTTA+TGG | - | chr1_4:49920881-49920900 | Msa0167860:CDS | 40.0% | |
| CAAGTCTCCAATTTCTCACT+TGG | - | chr1_4:49921353-49921372 | Msa0167860:intron | 40.0% | |
| !! | GGAACAAGATTTTGAGGAAG+AGG | - | chr1_4:49921682-49921701 | Msa0167860:intron | 40.0% |
| GTCGTTAATGATCTCAAAGG+AGG | - | chr1_4:49921906-49921925 | Msa0167860:CDS | 40.0% | |
| AGACTGCATATTGTTGTGCT+TGG | - | chr1_4:49921966-49921985 | Msa0167860:CDS | 40.0% | |
| ! | GCTCGAAATCACACTAGTCT+AGG | + | chr1_4:49920524-49920543 | None:intergenic | 45.0% |
| GAAGAAGAAAACATGCCTGC+AGG | - | chr1_4:49920572-49920591 | Msa0167860:three_prime_UTR | 45.0% | |
| AGAGAATGAATCTCTGGTGC+GGG | + | chr1_4:49920612-49920631 | None:intergenic | 45.0% | |
| GAGAGAATGAATCTCTGGTG+CGG | + | chr1_4:49920613-49920632 | None:intergenic | 45.0% | |
| ATTGTTCCCTTCTTGCGGAA+GGG | + | chr1_4:49920638-49920657 | None:intergenic | 45.0% | |
| TATTGTTCCCTTCTTGCGGA+AGG | + | chr1_4:49920639-49920658 | None:intergenic | 45.0% | |
| AGGCTATTGTTCCCTTCTTG+CGG | + | chr1_4:49920643-49920662 | None:intergenic | 45.0% | |
| GATGTGATAAGTCCTGAGGT+AGG | + | chr1_4:49920672-49920691 | None:intergenic | 45.0% | |
| GTTAATGGAGCTGTGCACAA+AGG | - | chr1_4:49920713-49920732 | Msa0167860:CDS | 45.0% | |
| ATGCCGCACAAATTCTACCA+CGG | - | chr1_4:49920737-49920756 | Msa0167860:CDS | 45.0% | |
| AAATTCTACCACGGTCGTAC+CGG | - | chr1_4:49920746-49920765 | Msa0167860:CDS | 45.0% | |
| !! | CTTGTTGACTTCGACACCAA+TGG | + | chr1_4:49920798-49920817 | None:intergenic | 45.0% |
| ATGGCATAACATGCTCCACT+CGG | + | chr1_4:49921716-49921735 | None:intergenic | 45.0% | |
| TGGAGCATGTTATGCCATCA+AGG | - | chr1_4:49921718-49921737 | Msa0167860:intron | 45.0% | |
| GAATGATCAATTGAAGGCCG+AGG | - | chr1_4:49921773-49921792 | Msa0167860:intron | 45.0% | |
| TCCACCATGAAACCAGGTTT+GGG | + | chr1_4:49921846-49921865 | None:intergenic | 45.0% | |
| TTCCACCATGAAACCAGGTT+TGG | + | chr1_4:49921847-49921866 | None:intergenic | 45.0% | |
| ! | AAACCTGGTTTCATGGTGGA+AGG | - | chr1_4:49921846-49921865 | Msa0167860:CDS | 45.0% |
| ! | GCTCGAAATCACACTAGTCT+AGG | + | chr1_4:49920524-49920543 | None:intergenic | 45.0% |
| GAAGAAGAAAACATGCCTGC+AGG | - | chr1_4:49920572-49920591 | Msa0167860:three_prime_UTR | 45.0% | |
| AGAGAATGAATCTCTGGTGC+GGG | + | chr1_4:49920612-49920631 | None:intergenic | 45.0% | |
| GAGAGAATGAATCTCTGGTG+CGG | + | chr1_4:49920613-49920632 | None:intergenic | 45.0% | |
| ATTGTTCCCTTCTTGCGGAA+GGG | + | chr1_4:49920638-49920657 | None:intergenic | 45.0% | |
| TATTGTTCCCTTCTTGCGGA+AGG | + | chr1_4:49920639-49920658 | None:intergenic | 45.0% | |
| AGGCTATTGTTCCCTTCTTG+CGG | + | chr1_4:49920643-49920662 | None:intergenic | 45.0% | |
| GATGTGATAAGTCCTGAGGT+AGG | + | chr1_4:49920672-49920691 | None:intergenic | 45.0% | |
| GTTAATGGAGCTGTGCACAA+AGG | - | chr1_4:49920713-49920732 | Msa0167860:CDS | 45.0% | |
| ATGCCGCACAAATTCTACCA+CGG | - | chr1_4:49920737-49920756 | Msa0167860:CDS | 45.0% | |
| AAATTCTACCACGGTCGTAC+CGG | - | chr1_4:49920746-49920765 | Msa0167860:CDS | 45.0% | |
| !! | CTTGTTGACTTCGACACCAA+TGG | + | chr1_4:49920798-49920817 | None:intergenic | 45.0% |
| ATGGCATAACATGCTCCACT+CGG | + | chr1_4:49921716-49921735 | None:intergenic | 45.0% | |
| TGGAGCATGTTATGCCATCA+AGG | - | chr1_4:49921718-49921737 | Msa0167860:intron | 45.0% | |
| GAATGATCAATTGAAGGCCG+AGG | - | chr1_4:49921773-49921792 | Msa0167860:intron | 45.0% | |
| TCCACCATGAAACCAGGTTT+GGG | + | chr1_4:49921846-49921865 | None:intergenic | 45.0% | |
| TTCCACCATGAAACCAGGTT+TGG | + | chr1_4:49921847-49921866 | None:intergenic | 45.0% | |
| ! | AAACCTGGTTTCATGGTGGA+AGG | - | chr1_4:49921846-49921865 | Msa0167860:CDS | 45.0% |
| GAAAACATGCCTGCAGGTCA+TGG | - | chr1_4:49920578-49920597 | Msa0167860:three_prime_UTR | 50.0% | |
| GATCGTAAACCATGACCTGC+AGG | + | chr1_4:49920590-49920609 | None:intergenic | 50.0% | |
| GGGACGAGAGAATGAATCTC+TGG | + | chr1_4:49920618-49920637 | None:intergenic | 50.0% | |
| GTGATAAGTCCTGAGGTAGG+TGG | + | chr1_4:49920669-49920688 | None:intergenic | 50.0% | |
| CACCGATGTGATAAGTCCTG+AGG | + | chr1_4:49920676-49920695 | None:intergenic | 50.0% | |
| CGACCGTGGTAGAATTTGTG+CGG | + | chr1_4:49920743-49920762 | None:intergenic | 50.0% | |
| ! | GTGTCTGGAATGTCACCAAG+CGG | - | chr1_4:49920771-49920790 | Msa0167860:CDS | 50.0% |
| ! | TGTCTGGAATGTCACCAAGC+GGG | - | chr1_4:49920772-49920791 | Msa0167860:CDS | 50.0% |
| GAAGAGGATTCATGTCCGAG+TGG | - | chr1_4:49921698-49921717 | Msa0167860:intron | 50.0% | |
| TATGCCATCAAGGTGCACTG+AGG | - | chr1_4:49921728-49921747 | Msa0167860:intron | 50.0% | |
| AACTCCTCAGTGCACCTTGA+TGG | + | chr1_4:49921735-49921754 | None:intergenic | 50.0% | |
| GCACTGAGGAGTTCAGATTG+AGG | - | chr1_4:49921742-49921761 | Msa0167860:intron | 50.0% | |
| TCAATTGAAGGCCGAGGCTA+AGG | - | chr1_4:49921779-49921798 | Msa0167860:intron | 50.0% | |
| CCACCATGAAACCAGGTTTG+GGG | + | chr1_4:49921845-49921864 | None:intergenic | 50.0% | |
| !! | CATGGTGGAAGGTGCTACAT+TGG | - | chr1_4:49921857-49921876 | Msa0167860:CDS | 50.0% |
| GAAAACATGCCTGCAGGTCA+TGG | - | chr1_4:49920578-49920597 | Msa0167860:three_prime_UTR | 50.0% | |
| GATCGTAAACCATGACCTGC+AGG | + | chr1_4:49920590-49920609 | None:intergenic | 50.0% | |
| GGGACGAGAGAATGAATCTC+TGG | + | chr1_4:49920618-49920637 | None:intergenic | 50.0% | |
| GTGATAAGTCCTGAGGTAGG+TGG | + | chr1_4:49920669-49920688 | None:intergenic | 50.0% | |
| CACCGATGTGATAAGTCCTG+AGG | + | chr1_4:49920676-49920695 | None:intergenic | 50.0% | |
| CGACCGTGGTAGAATTTGTG+CGG | + | chr1_4:49920743-49920762 | None:intergenic | 50.0% | |
| ! | GTGTCTGGAATGTCACCAAG+CGG | - | chr1_4:49920771-49920790 | Msa0167860:CDS | 50.0% |
| ! | TGTCTGGAATGTCACCAAGC+GGG | - | chr1_4:49920772-49920791 | Msa0167860:CDS | 50.0% |
| GAAGAGGATTCATGTCCGAG+TGG | - | chr1_4:49921698-49921717 | Msa0167860:intron | 50.0% | |
| TATGCCATCAAGGTGCACTG+AGG | - | chr1_4:49921728-49921747 | Msa0167860:intron | 50.0% | |
| AACTCCTCAGTGCACCTTGA+TGG | + | chr1_4:49921735-49921754 | None:intergenic | 50.0% | |
| GCACTGAGGAGTTCAGATTG+AGG | - | chr1_4:49921742-49921761 | Msa0167860:intron | 50.0% | |
| TCAATTGAAGGCCGAGGCTA+AGG | - | chr1_4:49921779-49921798 | Msa0167860:intron | 50.0% | |
| CCACCATGAAACCAGGTTTG+GGG | + | chr1_4:49921845-49921864 | None:intergenic | 50.0% | |
| !! | CATGGTGGAAGGTGCTACAT+TGG | - | chr1_4:49921857-49921876 | Msa0167860:CDS | 50.0% |
| TCTCGTCCCTTCCGCAAGAA+GGG | - | chr1_4:49920629-49920648 | Msa0167860:three_prime_UTR | 55.0% | |
| ! | TAGCCTTAGCCACCTACCTC+AGG | - | chr1_4:49920657-49920676 | Msa0167860:three_prime_UTR | 55.0% |
| AGTCCTGAGGTAGGTGGCTA+AGG | + | chr1_4:49920663-49920682 | None:intergenic | 55.0% | |
| GGTGACATTCCAGACACGAC+CGG | + | chr1_4:49920768-49920787 | None:intergenic | 55.0% | |
| AATGTCACCAAGCGGGCCAT+TGG | - | chr1_4:49920779-49920798 | Msa0167860:CDS | 55.0% | |
| GGTGCTTATCACCTCTCCCT+TGG | + | chr1_4:49921805-49921824 | None:intergenic | 55.0% | |
| CCCCAAACCTGGTTTCATGG+TGG | - | chr1_4:49921842-49921861 | Msa0167860:CDS | 55.0% | |
| GCACCTTCCACCATGAAACC+AGG | + | chr1_4:49921852-49921871 | None:intergenic | 55.0% | |
| TCTCGTCCCTTCCGCAAGAA+GGG | - | chr1_4:49920629-49920648 | Msa0167860:three_prime_UTR | 55.0% | |
| ! | TAGCCTTAGCCACCTACCTC+AGG | - | chr1_4:49920657-49920676 | Msa0167860:three_prime_UTR | 55.0% |
| AGTCCTGAGGTAGGTGGCTA+AGG | + | chr1_4:49920663-49920682 | None:intergenic | 55.0% | |
| GGTGACATTCCAGACACGAC+CGG | + | chr1_4:49920768-49920787 | None:intergenic | 55.0% | |
| AATGTCACCAAGCGGGCCAT+TGG | - | chr1_4:49920779-49920798 | Msa0167860:CDS | 55.0% | |
| GGTGCTTATCACCTCTCCCT+TGG | + | chr1_4:49921805-49921824 | None:intergenic | 55.0% | |
| CCCCAAACCTGGTTTCATGG+TGG | - | chr1_4:49921842-49921861 | Msa0167860:CDS | 55.0% | |
| GCACCTTCCACCATGAAACC+AGG | + | chr1_4:49921852-49921871 | None:intergenic | 55.0% | |
| CTCTCGTCCCTTCCGCAAGA+AGG | - | chr1_4:49920628-49920647 | Msa0167860:three_prime_UTR | 60.0% | |
| TTCGACACCAATGGCCCGCT+TGG | + | chr1_4:49920789-49920808 | None:intergenic | 60.0% | |
| AAGGCCGAGGCTAAGGCCAA+GGG | - | chr1_4:49921786-49921805 | Msa0167860:intron | 60.0% | |
| !! | CTCTCCCTTGGCCTTAGCCT+CGG | + | chr1_4:49921793-49921812 | None:intergenic | 60.0% |
| AAGCACCAAGCGCAAGCCAG+AGG | - | chr1_4:49921818-49921837 | Msa0167860:intron | 60.0% | |
| AGCACCAAGCGCAAGCCAGA+GGG | - | chr1_4:49921819-49921838 | Msa0167860:intron | 60.0% | |
| ! | AAACCAGGTTTGGGGCCCTC+TGG | + | chr1_4:49921837-49921856 | None:intergenic | 60.0% |
| GGGCCCCAAACCTGGTTTCA+TGG | - | chr1_4:49921839-49921858 | Msa0167860:CDS | 60.0% | |
| CTCTCGTCCCTTCCGCAAGA+AGG | - | chr1_4:49920628-49920647 | Msa0167860:three_prime_UTR | 60.0% | |
| TTCGACACCAATGGCCCGCT+TGG | + | chr1_4:49920789-49920808 | None:intergenic | 60.0% | |
| AAGGCCGAGGCTAAGGCCAA+GGG | - | chr1_4:49921786-49921805 | Msa0167860:intron | 60.0% | |
| !! | CTCTCCCTTGGCCTTAGCCT+CGG | + | chr1_4:49921793-49921812 | None:intergenic | 60.0% |
| AAGCACCAAGCGCAAGCCAG+AGG | - | chr1_4:49921818-49921837 | Msa0167860:intron | 60.0% | |
| AGCACCAAGCGCAAGCCAGA+GGG | - | chr1_4:49921819-49921838 | Msa0167860:intron | 60.0% | |
| ! | AAACCAGGTTTGGGGCCCTC+TGG | + | chr1_4:49921837-49921856 | None:intergenic | 60.0% |
| GGGCCCCAAACCTGGTTTCA+TGG | - | chr1_4:49921839-49921858 | Msa0167860:CDS | 60.0% | |
| AGACACGACCGGTACGACCG+TGG | + | chr1_4:49920757-49920776 | None:intergenic | 65.0% | |
| ! | ACGGTCGTACCGGTCGTGTC+TGG | - | chr1_4:49920756-49920775 | Msa0167860:CDS | 65.0% |
| GAAGGCCGAGGCTAAGGCCA+AGG | - | chr1_4:49921785-49921804 | Msa0167860:intron | 65.0% | |
| CGAGGCTAAGGCCAAGGGAG+AGG | - | chr1_4:49921791-49921810 | Msa0167860:intron | 65.0% | |
| AAGCCAGAGGGCCCCAAACC+TGG | - | chr1_4:49921831-49921850 | Msa0167860:CDS | 65.0% | |
| AGACACGACCGGTACGACCG+TGG | + | chr1_4:49920757-49920776 | None:intergenic | 65.0% | |
| ! | ACGGTCGTACCGGTCGTGTC+TGG | - | chr1_4:49920756-49920775 | Msa0167860:CDS | 65.0% |
| GAAGGCCGAGGCTAAGGCCA+AGG | - | chr1_4:49921785-49921804 | Msa0167860:intron | 65.0% | |
| CGAGGCTAAGGCCAAGGGAG+AGG | - | chr1_4:49921791-49921810 | Msa0167860:intron | 65.0% | |
| AAGCCAGAGGGCCCCAAACC+TGG | - | chr1_4:49921831-49921850 | Msa0167860:CDS | 65.0% | |
| ! | GGGGCCCTCTGGCTTGCGCT+TGG | + | chr1_4:49921826-49921845 | None:intergenic | 75.0% |
| ! | GGGGCCCTCTGGCTTGCGCT+TGG | + | chr1_4:49921826-49921845 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_4 | gene | 49920498 | 49922145 | 49920498 | ID=Msa0167860;Name=Msa0167860 |
| chr1_4 | mRNA | 49920498 | 49922145 | 49920498 | ID=Msa0167860-mRNA-1;Parent=Msa0167860;Name=Msa0167860-mRNA-1;_AED=0.00;_eAED=0.00;_QI=86|1|1|1|1|1|2|210|164 |
| chr1_4 | exon | 49920498 | 49920965 | 49920498 | ID=Msa0167860-mRNA-1:exon:14731;Parent=Msa0167860-mRNA-1 |
| chr1_4 | exon | 49921823 | 49922145 | 49921823 | ID=Msa0167860-mRNA-1:exon:14730;Parent=Msa0167860-mRNA-1 |
| chr1_4 | five_prime_UTR | 49922060 | 49922145 | 49922060 | ID=Msa0167860-mRNA-1:five_prime_utr;Parent=Msa0167860-mRNA-1 |
| chr1_4 | CDS | 49921823 | 49922059 | 49921823 | ID=Msa0167860-mRNA-1:cds;Parent=Msa0167860-mRNA-1 |
| chr1_4 | CDS | 49920708 | 49920965 | 49920708 | ID=Msa0167860-mRNA-1:cds;Parent=Msa0167860-mRNA-1 |
| chr1_4 | three_prime_UTR | 49920498 | 49920707 | 49920498 | ID=Msa0167860-mRNA-1:three_prime_utr;Parent=Msa0167860-mRNA-1 |
| Gene Sequence |
| Protein sequence |
