AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0315850


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0315850 MtrunA17_Chr2g0287401 88.757 169 11 3 1 163 2 168 5.02e-81 248
Msa0315850 MtrunA17_Chr2g0287401 40.625 160 60 1 357 481 7 166 1.98e-25 102
Msa0315850 MtrunA17_Chr2g0287371 85.135 74 11 0 357 430 10 83 1.01e-35 132
Msa0315850 MtrunA17_Chr2g0287371 84.615 39 6 0 435 473 190 228 3.28e-14 72.0
Msa0315850 MtrunA17_Chr2g0287391 65.000 140 16 3 167 286 1 127 9.88e-35 128
Msa0315850 MtrunA17_Chr2g0287391 43.503 177 76 7 2 154 3 179 1.58e-25 103
Msa0315850 MtrunA17_Chr2g0287391 31.737 167 60 3 362 474 13 179 7.84e-15 72.8
Msa0315850 MtrunA17_Chr2g0286581 46.237 186 75 5 1 161 12 197 2.49e-34 127
Msa0315850 MtrunA17_Chr2g0286581 38.889 180 54 4 358 481 18 197 2.10e-24 100
Msa0315850 MtrunA17_Chr2g0286581 45.045 111 37 3 165 255 9 115 3.77e-15 73.9
Msa0315850 MtrunA17_Chr2g0287321 42.949 156 52 1 363 481 22 177 7.24e-31 117
Msa0315850 MtrunA17_Chr2g0287321 43.275 171 83 6 1 161 11 177 4.16e-27 107
Msa0315850 MtrunA17_Chr2g0287381 91.525 59 5 0 300 358 1 59 1.73e-30 112
Msa0315850 MtrunA17_Chr2g0287311 60.274 73 29 0 356 428 16 88 1.61e-22 95.5
Msa0315850 MtrunA17_Chr2g0287311 34.783 207 83 7 1 158 12 215 3.25e-20 89.0
Msa0315850 MtrunA17_Chr2g0288061 34.463 177 52 2 359 471 11 187 2.57e-19 85.9
Msa0315850 MtrunA17_Chr2g0287351 53.846 78 34 1 1 76 1 78 1.07e-18 86.3
Msa0315850 MtrunA17_Chr2g0287351 59.091 66 27 0 363 428 12 77 6.34e-16 78.2
Msa0315850 MtrunA17_Chr2g0287301 37.662 154 81 4 1 148 12 156 1.18e-17 80.1
Msa0315850 MtrunA17_Chr2g0287301 35.821 134 58 2 363 468 23 156 2.37e-13 67.8
Msa0315850 MtrunA17_Chr1g0170131 55.224 67 30 0 362 428 7 73 1.12e-16 79.3
Msa0315850 MtrunA17_Chr1g0170131 51.948 77 28 3 1 75 1 70 5.16e-12 65.5
Msa0315850 MtrunA17_Chr4g0019961 32.749 171 57 3 362 474 11 181 3.27e-16 77.0
Msa0315850 MtrunA17_Chr4g0019961 45.000 80 42 1 1 78 1 80 2.25e-13 68.9
Msa0315850 MtrunA17_Chr2g0287421 51.807 83 35 2 1 81 2 81 4.32e-16 76.3
Msa0315850 MtrunA17_Chr2g0287421 61.404 57 22 0 363 419 13 69 1.07e-14 72.4
Msa0315850 MtrunA17_Chr1g0156951 50.649 77 38 0 362 438 7 83 6.73e-16 77.0
Msa0315850 MtrunA17_Chr1g0156951 44.898 98 47 3 1 98 1 91 4.36e-14 71.6
Msa0315850 MtrunA17_Chr2g0287331 49.383 81 38 2 6 84 3 82 3.79e-15 72.0
Msa0315850 MtrunA17_Chr2g0287331 50.685 73 35 1 363 435 9 80 7.28e-15 70.9
Msa0315850 MtrunA17_Chr5g0420551 53.030 66 31 0 363 428 8 73 1.68e-14 73.2
Msa0315850 MtrunA17_Chr5g0420551 42.667 75 41 1 6 78 2 76 8.30e-11 62.4
Msa0315850 MtrunA17_Chr1g0156961 29.851 201 94 5 1 160 15 209 1.02e-11 64.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score

Find 87 sgRNAs with CRISPR-Local

Find 523 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATTATGTCAACAATTCTATT+TGG 0.233493 2_4:-12406869 Msa0315850:CDS
GGAGAGTTTGTCACATAATA+AGG 0.235361 2_4:-12406797 Msa0315850:CDS
AAGTAGCCTTTCATTCTTCT+TGG 0.256471 2_4:+12406822 None:intergenic
GATAAACCAGCAGAAAGTTT+TGG 0.268570 2_4:+12402675 None:intergenic
GGCTGAGTTGGATAATCTTT+TGG 0.309305 2_4:-12411549 Msa0315850:CDS
GAATATGAATGTAGCTTCTA+AGG 0.326077 2_4:-12406728 Msa0315850:CDS
CAAGCAATCCTCAGGAATTA+AGG 0.327825 2_4:-12403168 Msa0315850:CDS
GAAGAATGAAAGGCTACTTA+TGG 0.345047 2_4:-12406818 Msa0315850:CDS
TTGATAACCCAACTCAGATT+TGG 0.351782 2_4:+12406754 None:intergenic
TCCGGAAGAACCACCGTGTT+TGG 0.360103 2_4:+12408982 None:intergenic
TTTCAGTGAACGCTCTTAGA+AGG 0.381654 2_4:+12403089 None:intergenic
AGATCTAACCTCCAAGGCTT+TGG 0.383571 2_4:-12408818 Msa0315850:CDS
ATTTCGATTATCAGTTCTTC+CGG 0.390404 2_4:+12408964 None:intergenic
CGAAACGAGCGAGGATGAAT+AGG 0.394505 2_4:-12411574 Msa0315850:CDS
TCGGTCTATCAAAAGGGAAT+TGG 0.403202 2_4:-12411519 Msa0315850:intron
CTTCTTCTTCTCCTTGAAGC+TGG 0.410907 2_4:+12411654 None:intergenic
TTTGGAAGAAGATTTAGAAA+TGG 0.411692 2_4:-12406851 Msa0315850:CDS
ATCTGTTTAGTTCAAGCAAC+GGG 0.414443 2_4:-12406705 Msa0315850:CDS
ACCAAACACGGTGGTTCTTC+CGG 0.423653 2_4:-12408983 Msa0315850:CDS
AGCTTAGACCAAATCTGAGT+TGG 0.428182 2_4:-12406762 Msa0315850:CDS
ATTTCGATTATCAACTCCTC+AGG 0.438283 2_4:+12403208 None:intergenic
TCTTCTCCTTGAAGCTGGTC+GGG 0.442332 2_4:+12411659 None:intergenic
CAGATTCCCGACCAGCTTCA+AGG 0.443544 2_4:-12411665 Msa0315850:CDS
TTCTTCTCCTTGAAGCTGGT+CGG 0.449283 2_4:+12411658 None:intergenic
TTTGCGGTGTTCCGCGGCCG+TGG 0.452047 2_4:+12411703 None:intergenic
TCATTTCCAGAGTTGATTCA+AGG 0.453871 2_4:-12408942 Msa0315850:CDS
GTGTCTCCAAAACTTTCTGC+TGG 0.454560 2_4:-12402681 Msa0315850:CDS
AGTTGATACGCTAGCTATGA+AGG 0.457439 2_4:-12411486 Msa0315850:CDS
GATGAATAGGTTGGCTGAGT+TGG 0.461617 2_4:-12411561 Msa0315850:CDS
AATCGCCGTTCTACTTGTTA+CGG 0.469939 2_4:-12403068 Msa0315850:CDS
ATTTCGATCATCAGTTCCAC+TGG 0.474658 2_4:+12411860 None:intergenic
TAAGGTGTGTTTGCAAGTTG+TGG 0.474854 2_4:-12403150 Msa0315850:CDS
GCTTAGACCAAATCTGAGTT+GGG 0.485257 2_4:-12406761 Msa0315850:CDS
GGCGATGATGGCGGAAGCAA+CGG 0.486575 2_4:-12411906 None:intergenic
AGCAATGACGGCGGAAGCAA+CGG 0.488849 2_4:-12409013 Msa0315850:CDS
GCACTTTCAGAGCTTGTTCA+CGG 0.493716 2_4:-12408848 Msa0315850:intron
TGCTTGACTCAACTCTAGAA+AGG 0.494070 2_4:+12403185 None:intergenic
GGACTGTTCCAAAGCCTTGG+AGG 0.494324 2_4:+12408810 None:intergenic
TCTTCTTCTTCCTCCTCTTG+AGG 0.507183 2_4:+12408745 None:intergenic
ATTGGACTGTTCCAAAGCCT+TGG 0.508501 2_4:+12408807 None:intergenic
GGGAATCTGATGCGAATTGA+AGG 0.514520 2_4:+12411679 None:intergenic
CTCTTAGAAGGTGATTCTCC+AGG 0.523863 2_4:+12403101 None:intergenic
CAAACAATCCTCTGCAGTTG+AGG 0.526998 2_4:-12411820 Msa0315850:CDS
AGTATTCCTTGAATCAACTC+TGG 0.529325 2_4:+12408936 None:intergenic
GAAAGACTTTAATTTCTCAA+AGG 0.530023 2_4:+12403045 None:intergenic
AAGCTTAACGAGAGCAATGA+CGG 0.533700 2_4:-12409025 Msa0315850:CDS
AGTTGAGTCAAGCAATCCTC+AGG 0.537079 2_4:-12403176 Msa0315850:CDS
CGATCTACTTTCCACGGCCG+CGG 0.540837 2_4:-12411714 Msa0315850:CDS
AGTTTGTCACATAATAAGGA+TGG 0.549319 2_4:-12406793 Msa0315850:CDS
GAAGGATTTGCGGTGTTCCG+CGG 0.557164 2_4:+12411697 None:intergenic
AAGAAGATTTAGAAATGGAA+AGG 0.567041 2_4:-12406846 Msa0315850:CDS
CAAGGAATACTCTGCAACTG+AGG 0.574910 2_4:-12408924 Msa0315850:CDS
CGCGGCCGTGGAAAGTAGAT+CGG 0.577236 2_4:+12411715 None:intergenic
GATGCGAATTGAAGGATTTG+CGG 0.577483 2_4:+12411687 None:intergenic
TGTTTGAGTCAACTCTAGCA+AGG 0.578683 2_4:+12411837 None:intergenic
CGCGGTCATGCCTCAAGAGG+AGG 0.582975 2_4:-12408755 Msa0315850:CDS
AAAGGTCCAAGAAGAATGAA+AGG 0.591888 2_4:-12406828 Msa0315850:CDS
CATCACCGATCTACTTTCCA+CGG 0.592782 2_4:-12411720 Msa0315850:CDS
AAGAAGCTGCGAAACGAGCG+AGG 0.593303 2_4:-12411583 Msa0315850:CDS
ACGAGCGAGGATGAATAGGT+TGG 0.594745 2_4:-12411570 Msa0315850:CDS
TGTCGGCGAGCGATTTCTGA+AGG 0.594910 2_4:+12411741 None:intergenic
GATCTGTTTAGTTCAAGCAA+CGG 0.596444 2_4:-12406706 Msa0315850:CDS
GTTCAAGCAACGGGAAAGTG+AGG 0.599428 2_4:-12406696 Msa0315850:CDS
CAGAGATGACATTCAAGCTG+TGG 0.602704 2_4:-12402717 Msa0315850:CDS
AACGGCGGTGTCACCAAACA+CGG 0.611937 2_4:-12408995 Msa0315850:CDS
AGATGACATTCAAGCTGTGG+AGG 0.612823 2_4:-12402714 Msa0315850:CDS
CAAACACACCTTAATTCCTG+AGG 0.617063 2_4:+12403160 None:intergenic
GGAAAGTAGATCGGTGATGT+CGG 0.618667 2_4:+12411724 None:intergenic
GTTTGTCACATAATAAGGAT+GGG 0.619352 2_4:-12406792 Msa0315850:CDS
ACCGACCACGTTTCTCCCAG+TGG 0.621838 2_4:-12411876 Msa0315850:CDS
TGAGGTCAGTATGCAAGTGG+TGG 0.622685 2_4:-12411802 Msa0315850:CDS
TAACGCGGTCATGCCTCAAG+AGG 0.630152 2_4:-12408758 Msa0315850:CDS
TTTCGATTATCAACTCCTCA+GGG 0.631075 2_4:+12403209 None:intergenic
ATGTTGCGATATGAAAGCAT+TGG 0.637121 2_4:+12408789 None:intergenic
CATCAAAGATCTAACCTCCA+AGG 0.641038 2_4:-12408824 Msa0315850:CDS
AAAGGCCGTAACAAGTAGAA+CGG 0.644069 2_4:+12403063 None:intergenic
GATGATGGCGGAAGCAACGG+CGG 0.649358 2_4:-12411903 None:intergenic
AATGACGGCGGAAGCAACGG+CGG 0.652409 2_4:-12409010 Msa0315850:CDS
TTTCGATCATCAGTTCCACT+GGG 0.654202 2_4:+12411861 None:intergenic
CAGTTCCACTGGGAGAAACG+TGG 0.668153 2_4:+12411871 None:intergenic
CATACTGACCTCAACTGCAG+AGG 0.674011 2_4:+12411812 None:intergenic
TCCACTGGGAGAAACGTGGT+CGG 0.678942 2_4:+12411875 None:intergenic
ACTGAACATGATTCTCCCTG+AGG 0.698815 2_4:-12403224 Msa0315850:CDS
AGTTGAGGTCAGTATGCAAG+TGG 0.718127 2_4:-12411805 Msa0315850:CDS
CTTAACGAGAGCAATGACGG+CGG 0.742276 2_4:-12409022 Msa0315850:CDS
GGCGGTGTCACCAAACACGG+TGG 0.758113 2_4:-12408992 Msa0315850:CDS
GCAACATATTATAAATAACG+CGG 0.783690 2_4:-12408773 Msa0315850:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATTTAATAATATTATAAAA+AGG + chr2_4:12404497-12404516 None:intergenic 0.0%
!!! AAATAAAATTTTTTTTTTTA+AGG + chr2_4:12410158-12410177 None:intergenic 0.0%
!!! TAATATTTATATATTTTTTT+AGG - chr2_4:12411101-12411120 Msa0315850:intron 0.0%
!!! AATATTTATATATTTTTTTA+GGG - chr2_4:12411102-12411121 Msa0315850:intron 0.0%
!! TAAAGAAAATAAATAAGATT+CGG + chr2_4:12404041-12404060 None:intergenic 10.0%
!! AAAGAATAATTACTAAATTT+GGG - chr2_4:12404215-12404234 Msa0315850:intron 10.0%
!! TCTTATATAACAATATATAA+AGG - chr2_4:12404409-12404428 Msa0315850:intron 10.0%
!! CTTATATAACAATATATAAA+GGG - chr2_4:12404410-12404429 Msa0315850:intron 10.0%
!! TTATATAACAATATATAAAG+GGG - chr2_4:12404411-12404430 Msa0315850:intron 10.0%
!! ATATTATAAAAAGGATAATT+AGG + chr2_4:12404488-12404507 None:intergenic 10.0%
!!! ATCATATTCAATATTTTTTT+AGG + chr2_4:12404653-12404672 None:intergenic 10.0%
!!! ATTTTTTTATAAGAAATACA+AGG - chr2_4:12404827-12404846 Msa0315850:intron 10.0%
!!! GATAATTTAATTTTTTTTAG+GGG + chr2_4:12405342-12405361 None:intergenic 10.0%
!! ATTTATTTGATTATCTAATA+TGG - chr2_4:12407100-12407119 Msa0315850:intron 10.0%
!! TAAAAATAAATCAATAAATC+AGG - chr2_4:12408595-12408614 Msa0315850:intron 10.0%
!! AAAAATAAATCAATAAATCA+GGG - chr2_4:12408596-12408615 Msa0315850:intron 10.0%
!!! TTTTTCCTTAAAATATAAAA+AGG + chr2_4:12408751-12408770 None:intergenic 10.0%
!! AAATTGTGATTATATTTATA+CGG - chr2_4:12409462-12409481 Msa0315850:intron 10.0%
!! TGAAAACTATAAATTAATTA+AGG - chr2_4:12409766-12409785 Msa0315850:intron 10.0%
!! GAAAACTATAAATTAATTAA+GGG - chr2_4:12409767-12409786 Msa0315850:intron 10.0%
!! TTTAGTAAAAAAAATATAGT+AGG + chr2_4:12411046-12411065 None:intergenic 10.0%
!!! TTTTTATGTTAAGTAGTTTA+AGG + chr2_4:12404083-12404102 None:intergenic 15.0%
!! GAAAGAATAATTACTAAATT+TGG - chr2_4:12404214-12404233 Msa0315850:intron 15.0%
!!! TTGCATAATTTTTTTTTTGT+TGG + chr2_4:12404303-12404322 None:intergenic 15.0%
!! GTATTTCTTATAAAAAAATG+TGG + chr2_4:12404826-12404845 None:intergenic 15.0%
!!! TTTATTTTGATTCATAATGT+TGG - chr2_4:12406608-12406627 Msa0315850:intron 15.0%
!! TTAAAATATATAGCAAGAAT+CGG + chr2_4:12406975-12406994 None:intergenic 15.0%
!!! ATTCTTGCTATATATTTTAA+TGG - chr2_4:12406975-12406994 Msa0315850:intron 15.0%
!!! TTCTTGCTATATATTTTAAT+GGG - chr2_4:12406976-12406995 Msa0315850:intron 15.0%
!!! ATTTTAGAATGTCATTTTTA+CGG - chr2_4:12407042-12407061 Msa0315850:intron 15.0%
!!! ATCTGAGTTATTTAATTTTT+AGG - chr2_4:12407378-12407397 Msa0315850:intron 15.0%
!!! TTATATTTTAAGGAAAAACT+AGG - chr2_4:12408753-12408772 Msa0315850:CDS 15.0%
!! TAATATTAAAATGAAAGCTA+AGG - chr2_4:12409394-12409413 Msa0315850:intron 15.0%
!! AATTGTGATTATATTTATAC+GGG - chr2_4:12409463-12409482 Msa0315850:intron 15.0%
!! TCAACAATATTGAAATAAAT+TGG + chr2_4:12409550-12409569 None:intergenic 15.0%
!! TAATGTAATTATAAAACTTC+TGG + chr2_4:12409608-12409627 None:intergenic 15.0%
!! TATATCAATAAATTACCTTT+AGG + chr2_4:12409711-12409730 None:intergenic 15.0%
!! AAAAATACATATTAAATCGT+TGG + chr2_4:12409811-12409830 None:intergenic 15.0%
!! ATATATACCATATTACATAT+AGG - chr2_4:12410399-12410418 Msa0315850:intron 15.0%
!! TAACATTTACCATTAAAAAA+AGG - chr2_4:12410853-12410872 Msa0315850:intron 15.0%
!! GGCTTATTAGATTATTTATA+TGG - chr2_4:12403205-12403224 Msa0315850:CDS 20.0%
!! TTCAAATCTTTGTAAATGAA+TGG - chr2_4:12403338-12403357 Msa0315850:intron 20.0%
!! GAAATTAAAGAAAAAGAAAG+AGG + chr2_4:12403911-12403930 None:intergenic 20.0%
!!! AAAATTGCATAATTTTCTAC+GGG + chr2_4:12404280-12404299 None:intergenic 20.0%
!!! GAAAATTGCATAATTTTCTA+CGG + chr2_4:12404281-12404300 None:intergenic 20.0%
!! AAAAAAAAGTCAATCCAAAA+AGG + chr2_4:12404441-12404460 None:intergenic 20.0%
!!! TAATAAGACTAGATTGATTT+TGG + chr2_4:12404945-12404964 None:intergenic 20.0%
!! GGTATATTACATAACATATT+CGG - chr2_4:12405199-12405218 Msa0315850:intron 20.0%
!! TAGCTTCATATTTATTTAGA+GGG + chr2_4:12405249-12405268 None:intergenic 20.0%
!! ATAGCTTCATATTTATTTAG+AGG + chr2_4:12405250-12405269 None:intergenic 20.0%
!!! TTAATCTGAAATTACAATGA+AGG - chr2_4:12406225-12406244 Msa0315850:intron 20.0%
!!! TTAGAGATTTTGATGTTATT+GGG - chr2_4:12406252-12406271 Msa0315850:intron 20.0%
!!! ACTGCAAATAATTTTACAAT+TGG + chr2_4:12406437-12406456 None:intergenic 20.0%
!! AAATTAAAGGAAAAGAGAAT+GGG + chr2_4:12406647-12406666 None:intergenic 20.0%
!!! AGTATCATGATTTTAAGATT+TGG - chr2_4:12406698-12406717 Msa0315850:CDS 20.0%
!!! GTATCATGATTTTAAGATTT+GGG - chr2_4:12406699-12406718 Msa0315850:CDS 20.0%
!! TGTAAAATTATTTACAGTTG+TGG - chr2_4:12407002-12407021 Msa0315850:intron 20.0%
!!! GTAAAAATGACATTCTAAAA+TGG + chr2_4:12407043-12407062 None:intergenic 20.0%
!!! TTTTAGAATGTCATTTTTAC+GGG - chr2_4:12407043-12407062 Msa0315850:intron 20.0%
!! ATTATGTCAACAATTCTATT+TGG - chr2_4:12407673-12407692 Msa0315850:intron 20.0%
!! GAAAATAAAAACAAAATCAG+CGG + chr2_4:12408012-12408031 None:intergenic 20.0%
!! ATAAAAATGACATACTAACA+TGG + chr2_4:12408275-12408294 None:intergenic 20.0%
!!! ATTAGTTTTTCATTGATGTA+AGG - chr2_4:12408293-12408312 Msa0315850:intron 20.0%
!! TATACACATTTACAATGTTT+GGG + chr2_4:12408511-12408530 None:intergenic 20.0%
!! TTATACACATTTACAATGTT+TGG + chr2_4:12408512-12408531 None:intergenic 20.0%
!! GAAAATTGAATGACTAAAAT+TGG - chr2_4:12408564-12408583 Msa0315850:intron 20.0%
!! AAATATAAAAAGGCTTTCAA+TGG + chr2_4:12408741-12408760 None:intergenic 20.0%
!!! GAAAGCCTTTTTATATTTTA+AGG - chr2_4:12408743-12408762 Msa0315850:CDS 20.0%
!!! TATTAAATCGTTGGTTTAAT+TGG + chr2_4:12409802-12409821 None:intergenic 20.0%
!! ATAGAAACCTATATGTAATA+TGG + chr2_4:12410409-12410428 None:intergenic 20.0%
!!! CTTTTTTCTTTTCTTTTTCT+TGG + chr2_4:12410577-12410596 None:intergenic 20.0%
!!! CATCTTTTTATAAAAATACG+AGG - chr2_4:12410603-12410622 Msa0315850:intron 20.0%
!!! AGGAATTCTTTATTTTGAAA+TGG - chr2_4:12410623-12410642 Msa0315850:intron 20.0%
!!! AATTCTTTATTTTGAAATGG+AGG - chr2_4:12410626-12410645 Msa0315850:intron 20.0%
!! TATATTTCGTAGATATAACA+TGG + chr2_4:12410713-12410732 None:intergenic 20.0%
!!! GAAAGAGATAAGTTTTAAAT+AGG - chr2_4:12410785-12410804 Msa0315850:intron 20.0%
!!! TATTTCGTACCTTTTTTTAA+TGG + chr2_4:12410865-12410884 None:intergenic 20.0%
!!! ATATATTTTTTTAGGGGAAA+AGG - chr2_4:12411109-12411128 Msa0315850:intron 20.0%
!! TTCCGAAGTATAAAAAAAAT+CGG - chr2_4:12411204-12411223 Msa0315850:intron 20.0%
!!! ATAATCTATTGAAGATTTTG+AGG - chr2_4:12411776-12411795 Msa0315850:CDS 20.0%
! TTCTCAGTTATGATTATCAA+TGG - chr2_4:12403140-12403159 Msa0315850:CDS 25.0%
! AAAAACCTTACATCAATGAA+TGG + chr2_4:12403474-12403493 None:intergenic 25.0%
!! CTGATAATAACTTGTACTTT+GGG - chr2_4:12403495-12403514 Msa0315850:intron 25.0%
!! CGATTTTCGTAAAGTTTTTT+TGG - chr2_4:12403605-12403624 Msa0315850:intron 25.0%
!!! TTTTTTTGGCTTATATTCAC+AGG - chr2_4:12403619-12403638 Msa0315850:intron 25.0%
! AAGTTGAAGTAAATACACAA+GGG + chr2_4:12403830-12403849 None:intergenic 25.0%
! AAAGTTGAAGTAAATACACA+AGG + chr2_4:12403831-12403850 None:intergenic 25.0%
!!! CACTTTTTAAGCAGTTTAAA+TGG - chr2_4:12404131-12404150 Msa0315850:intron 25.0%
!! AAATTGCATAATTTTCTACG+GGG + chr2_4:12404279-12404298 None:intergenic 25.0%
! TTATATAAGACCCAATTTAC+AGG + chr2_4:12404399-12404418 None:intergenic 25.0%
!!! ATTGTTATTTCTTTCAGCAT+AGG - chr2_4:12404722-12404741 Msa0315850:intron 25.0%
!!! TTGTTATTTCTTTCAGCATA+GGG - chr2_4:12404723-12404742 Msa0315850:intron 25.0%
! AACTCATAATCATTCACTTA+AGG - chr2_4:12404901-12404920 Msa0315850:intron 25.0%
!!! CATTTTTACGCAATTGATTT+AGG - chr2_4:12405076-12405095 Msa0315850:intron 25.0%
! ATATTACATAACATATTCGG+TGG - chr2_4:12405202-12405221 Msa0315850:intron 25.0%
!!! ATTCAGAAAGCATTTACATT+CGG - chr2_4:12405388-12405407 Msa0315850:intron 25.0%
!!! TTTTTGTGATTTTAGGGTTT+CGG + chr2_4:12405482-12405501 None:intergenic 25.0%
! GCAACATATTATAAATAACG+CGG - chr2_4:12405769-12405788 Msa0315850:intron 25.0%
! AAGAAAAAGACGAATTGAAA+CGG - chr2_4:12405927-12405946 Msa0315850:intron 25.0%
!! ATAATCTTTTGGTGAATCTT+CGG - chr2_4:12405978-12405997 Msa0315850:intron 25.0%
!!! GTTAGAGATTTTGATGTTAT+TGG - chr2_4:12406251-12406270 Msa0315850:intron 25.0%
! CTCAAATTGTTGTAAATGAA+TGG - chr2_4:12406298-12406317 Msa0315850:intron 25.0%
!!! GAATGGATTAATTAGTTGAA+TGG - chr2_4:12406315-12406334 Msa0315850:intron 25.0%
! TGTAAAATTATTTGCAGTTG+TGG - chr2_4:12406439-12406458 Msa0315850:intron 25.0%
! AAATTTCAATCTTTCATGTG+AGG - chr2_4:12406464-12406483 Msa0315850:intron 25.0%
! GGAAAAATTATTTGCTCAAA+TGG - chr2_4:12406535-12406554 Msa0315850:intron 25.0%
! GAAATTAAAGGAAAAGAGAA+TGG + chr2_4:12406648-12406667 None:intergenic 25.0%
! AATCATGATACTCATTACAT+AGG + chr2_4:12406690-12406709 None:intergenic 25.0%
!!! ATTAGTGTTTTTGATGCTAT+TGG - chr2_4:12407182-12407201 Msa0315850:intron 25.0%
!!! TTAGTGTTTTTGATGCTATT+GGG - chr2_4:12407183-12407202 Msa0315850:intron 25.0%
! GAGACTCAAATATTAAAACA+AGG + chr2_4:12407487-12407506 None:intergenic 25.0%
! TCTTTACTATTTGAGTGTTT+GGG + chr2_4:12407509-12407528 None:intergenic 25.0%
! ATCTTTACTATTTGAGTGTT+TGG + chr2_4:12407510-12407529 None:intergenic 25.0%
! CACTCAAATAGTAAAGATAA+AGG - chr2_4:12407512-12407531 Msa0315850:intron 25.0%
! ATTGTGCAATTTAACAATTG+AGG - chr2_4:12407606-12407625 Msa0315850:intron 25.0%
! TACAATACTTGAGTGATTAA+AGG - chr2_4:12407646-12407665 Msa0315850:intron 25.0%
! TTTGGAAGAAGATTTAGAAA+TGG - chr2_4:12407691-12407710 Msa0315850:intron 25.0%
! AAGAAGATTTAGAAATGGAA+AGG - chr2_4:12407696-12407715 Msa0315850:intron 25.0%
!!! TGGTTCTTGCTATATTTTAA+TGG - chr2_4:12408207-12408226 Msa0315850:intron 25.0%
!!! GGTTCTTGCTATATTTTAAT+GGG - chr2_4:12408208-12408227 Msa0315850:intron 25.0%
!! TTGAAATTTTATCACAACTG+CGG + chr2_4:12408248-12408267 None:intergenic 25.0%
! AAACTAAAGGAAAAGAAAGA+GGG + chr2_4:12408434-12408453 None:intergenic 25.0%
! TTAGCTTCTCACTATTAAAT+TGG + chr2_4:12408661-12408680 None:intergenic 25.0%
! AATCGCATAATTGTACTATT+TGG - chr2_4:12408679-12408698 Msa0315850:CDS 25.0%
! ATCGCATAATTGTACTATTT+GGG - chr2_4:12408680-12408699 Msa0315850:CDS 25.0%
!!! TATTTTAAGGAAAAACTAGG+AGG - chr2_4:12408756-12408775 Msa0315850:CDS 25.0%
!!! ATTTTAAGGAAAAACTAGGA+GGG - chr2_4:12408757-12408776 Msa0315850:CDS 25.0%
!! TTCTTCATTGTCAATCATTT+TGG - chr2_4:12408863-12408882 Msa0315850:intron 25.0%
!! TAATGCTTTTGTTAACATCA+AGG + chr2_4:12408890-12408909 None:intergenic 25.0%
! ATGTAAACAAATGTGAAATG+CGG + chr2_4:12409120-12409139 None:intergenic 25.0%
! ATTAACGATATGTTATGTGT+TGG + chr2_4:12409172-12409191 None:intergenic 25.0%
! CAAAAAAAAATACCGTGAAA+GGG - chr2_4:12409198-12409217 Msa0315850:intron 25.0%
! AATTTGAAAAGCTCTCTTTA+TGG + chr2_4:12409295-12409314 None:intergenic 25.0%
!! AGAGCTTTTCAAATTCAATT+GGG - chr2_4:12409300-12409319 Msa0315850:intron 25.0%
!!! TATTATTTTGCAAGCAAGTT+GGG + chr2_4:12409379-12409398 None:intergenic 25.0%
!!! ATATTATTTTGCAAGCAAGT+TGG + chr2_4:12409380-12409399 None:intergenic 25.0%
! AAAATGAAAGCTAAGGAATT+TGG - chr2_4:12409401-12409420 Msa0315850:intron 25.0%
! TATTCTGTCTCGAAAAAATA+TGG + chr2_4:12409514-12409533 None:intergenic 25.0%
! AACATATGCAAATTACTACA+TGG + chr2_4:12409644-12409663 None:intergenic 25.0%
!! TTTTCAGTAACTCATTATCA+TGG - chr2_4:12409667-12409686 Msa0315850:intron 25.0%
!!! CAATAAATTACCTTTAGGAT+TGG + chr2_4:12409706-12409725 None:intergenic 25.0%
! TTCTTGAAATTGAAGATCAT+CGG - chr2_4:12409868-12409887 Msa0315850:intron 25.0%
! TTTCGTTAAAAACGTTAATC+TGG - chr2_4:12409900-12409919 Msa0315850:intron 25.0%
!!! CCATTTGATTTATTTTCCAA+CGG - chr2_4:12410188-12410207 Msa0315850:intron 25.0%
! GAATTCGTTCACTTATATTA+AGG - chr2_4:12410239-12410258 Msa0315850:intron 25.0%
! TAGAGCACACAAAAATTAAA+GGG + chr2_4:12410303-12410322 None:intergenic 25.0%
!!! ATTTTTTTGTTGACGGAATT+CGG + chr2_4:12411185-12411204 None:intergenic 25.0%
!!! CTCCGATTTTTTTTATACTT+CGG + chr2_4:12411209-12411228 None:intergenic 25.0%
!!! GTTCAATTTCTGAGATTTTA+GGG + chr2_4:12411277-12411296 None:intergenic 25.0%
!! AGTTTTTGATATTCAATTCC+TGG - chr2_4:12411423-12411442 Msa0315850:CDS 25.0%
!! GAAAGACTTTAATTTCTCAA+AGG + chr2_4:12411500-12411519 None:intergenic 25.0%
! ATCTTCAATAGATTATCCAA+AGG + chr2_4:12411772-12411791 None:intergenic 25.0%
!!! AAGATTTTGAGGTATTTGAA+AGG - chr2_4:12411787-12411806 Msa0315850:CDS 25.0%
!!! AGATTTTGAGGTATTTGAAA+GGG - chr2_4:12411788-12411807 Msa0315850:CDS 25.0%
!! ATAATCTTTTGGTTGGTGTT+CGG - chr2_4:12403004-12403023 Msa0315850:intron 30.0%
!!! TTTTGAAATGTTGCAACTTC+TGG - chr2_4:12403184-12403203 Msa0315850:CDS 30.0%
GTGACTGATAGTATTATTCT+TGG - chr2_4:12403315-12403334 Msa0315850:intron 30.0%
! GTTTTCCATTCATTGATGTA+AGG - chr2_4:12403466-12403485 Msa0315850:intron 30.0%
! GCTGATAATAACTTGTACTT+TGG - chr2_4:12403494-12403513 Msa0315850:intron 30.0%
CTCGACATCTACATATAATA+TGG + chr2_4:12404009-12404028 None:intergenic 30.0%
AAGTTGTGTATTGAATGCAT+TGG - chr2_4:12404169-12404188 Msa0315850:intron 30.0%
! TATAAAGGGGATATCCTTTT+TGG - chr2_4:12404424-12404443 Msa0315850:intron 30.0%
!! GGATAATTAGGTTGAATGAA+TGG + chr2_4:12404476-12404495 None:intergenic 30.0%
GCTGAAAGAAATAACAATTC+TGG + chr2_4:12404720-12404739 None:intergenic 30.0%
!! TAAGACTAGATTGATTTTGG+TGG + chr2_4:12404942-12404961 None:intergenic 30.0%
! CGCAATTGATTTAGGATTTA+TGG - chr2_4:12405084-12405103 Msa0315850:intron 30.0%
GTGAGTTTATTTCAGTTGAT+AGG - chr2_4:12405178-12405197 Msa0315850:intron 30.0%
!! TTCAGAAAGCATTTACATTC+GGG - chr2_4:12405389-12405408 Msa0315850:intron 30.0%
AATGAGATTGTGTTTCCATT+CGG + chr2_4:12405443-12405462 None:intergenic 30.0%
!!! TTTTGTGATTTTAGGGTTTC+GGG + chr2_4:12405481-12405500 None:intergenic 30.0%
AACCCTAAAATCACAAAAAG+AGG - chr2_4:12405483-12405502 Msa0315850:intron 30.0%
ACCCTAAAATCACAAAAAGA+GGG - chr2_4:12405484-12405503 Msa0315850:intron 30.0%
! TCCCTCTTTTTGTGATTTTA+GGG + chr2_4:12405488-12405507 None:intergenic 30.0%
! TTCCCTCTTTTTGTGATTTT+AGG + chr2_4:12405489-12405508 None:intergenic 30.0%
ATTTCGATTATCAGTTCTTC+CGG + chr2_4:12405581-12405600 None:intergenic 30.0%
AAGTGCTTCTTAAGGAATTT+AGG + chr2_4:12405680-12405699 None:intergenic 30.0%
AGAAAAAGACGAATTGAAAC+GGG - chr2_4:12405928-12405947 Msa0315850:intron 30.0%
AAGACAAACTCTGAATTAAG+AGG + chr2_4:12406133-12406152 None:intergenic 30.0%
!!! TTTTGAAATGTTGCAACTAC+TGG - chr2_4:12406160-12406179 Msa0315850:intron 30.0%
GGTTATCTGATTGTCTTATA+TGG - chr2_4:12406181-12406200 Msa0315850:intron 30.0%
TCTTTGACCTGATAATATGT+TGG - chr2_4:12406364-12406383 Msa0315850:intron 30.0%
!! ATATGTTGGCTTCTTCTTAT+TGG - chr2_4:12406378-12406397 Msa0315850:intron 30.0%
! CTTATGTGTGTTTTACTTCT+AGG - chr2_4:12406573-12406592 Msa0315850:intron 30.0%
!! GTTAGTGATTTTGATGCTAT+CGG - chr2_4:12403290-12403309 Msa0315850:intron 30.0%
!! TTAGTGATTTTGATGCTATC+GGG - chr2_4:12406806-12406825 Msa0315850:CDS 30.0%
TCTTTGACCTGATAATACAT+TGG - chr2_4:12406919-12406938 Msa0315850:intron 30.0%
!! TAGTGTTTTTGATGCTATTG+GGG - chr2_4:12407184-12407203 Msa0315850:intron 30.0%
CGGATAAAAATGACATAACA+GGG + chr2_4:12407308-12407327 None:intergenic 30.0%
ACGGATAAAAATGACATAAC+AGG + chr2_4:12407309-12407328 None:intergenic 30.0%
ACAAGGATACTAACTACTTA+GGG + chr2_4:12407470-12407489 None:intergenic 30.0%
AACAAGGATACTAACTACTT+AGG + chr2_4:12407471-12407490 None:intergenic 30.0%
AATACTTGAGTGATTAAAGG+TGG - chr2_4:12407649-12407668 Msa0315850:intron 30.0%
ATACTTGAGTGATTAAAGGT+GGG - chr2_4:12407650-12407669 Msa0315850:intron 30.0%
AGTTTGTCACATAATAAGGA+TGG - chr2_4:12407749-12407768 Msa0315850:intron 30.0%
GTTTGTCACATAATAAGGAT+GGG - chr2_4:12407750-12407769 Msa0315850:intron 30.0%
GAATATGAATGTAGCTTCTA+AGG - chr2_4:12407814-12407833 Msa0315850:intron 30.0%
!! AAAGTGAGGAATTTTAATGG+AGG - chr2_4:12407860-12407879 Msa0315850:intron 30.0%
!! AAGTGAGGAATTTTAATGGA+GGG - chr2_4:12407861-12407880 Msa0315850:intron 30.0%
! TTATTTTCATTCGCATCTCA+AGG + chr2_4:12407965-12407984 None:intergenic 30.0%
GCATCAAAATCACATTTCAA+AGG + chr2_4:12408036-12408055 None:intergenic 30.0%
!!! GAGATGGTTTCTTTTTCAAA+TGG - chr2_4:12408078-12408097 Msa0315850:intron 30.0%
TTCAAATGGTTGTGAATGAA+TGG - chr2_4:12408092-12408111 Msa0315850:intron 30.0%
TCTTTGATCTGATAATACAC+CGG - chr2_4:12408159-12408178 Msa0315850:intron 30.0%
TGAAGAAGTAAACACACATA+AGG + chr2_4:12408350-12408369 None:intergenic 30.0%
TGTTTACTTCTTCAACTTCT+AGG - chr2_4:12408356-12408375 Msa0315850:intron 30.0%
AACTAAAGGAAAAGAAAGAG+GGG + chr2_4:12408433-12408452 None:intergenic 30.0%
GAAACTAAAGGAAAAGAAAG+AGG + chr2_4:12408435-12408454 None:intergenic 30.0%
TTACTTAGGGGACTAAAAAT+GGG + chr2_4:12408459-12408478 None:intergenic 30.0%
ATTACTTAGGGGACTAAAAA+TGG + chr2_4:12408460-12408479 None:intergenic 30.0%
ACCATGATACTCATTACTTA+GGG + chr2_4:12408472-12408491 None:intergenic 30.0%
AACCATGATACTCATTACTT+AGG + chr2_4:12408473-12408492 None:intergenic 30.0%
TGATTGACAATGAAGAATGA+GGG + chr2_4:12408860-12408879 None:intergenic 30.0%
ATGATTGACAATGAAGAATG+AGG + chr2_4:12408861-12408880 None:intergenic 30.0%
ATCAGTCAAAAATGCTGATA+TGG - chr2_4:12408911-12408930 Msa0315850:intron 30.0%
ATCCAAGTCACAATTCAATT+TGG + chr2_4:12408951-12408970 None:intergenic 30.0%
! AATTGAATTGTGACTTGGAT+AGG - chr2_4:12408951-12408970 Msa0315850:CDS 30.0%
! ATTGAATTGTGACTTGGATA+GGG - chr2_4:12408952-12408971 Msa0315850:CDS 30.0%
TGGTTATTGAGGTTTGAATA+CGG + chr2_4:12409042-12409061 None:intergenic 30.0%
!!! CCTTTCACGGTATTTTTTTT+TGG + chr2_4:12409200-12409219 None:intergenic 30.0%
CCAAAAAAAAATACCGTGAA+AGG - chr2_4:12409197-12409216 Msa0315850:intron 30.0%
ACATGAAATGAAATGAAGCT+TGG + chr2_4:12409258-12409277 None:intergenic 30.0%
! GAGAGCTTTTCAAATTCAAT+TGG - chr2_4:12409299-12409318 Msa0315850:intron 30.0%
! GAGCTTTTCAAATTCAATTG+GGG - chr2_4:12409301-12409320 Msa0315850:intron 30.0%
GCAAGTGTTTATTACAGTTT+AGG - chr2_4:12409922-12409941 Msa0315850:intron 30.0%
GAGTGATAATACTTCATTGT+TGG - chr2_4:12410038-12410057 Msa0315850:intron 30.0%
!! ATGCAAATACTGAAGTATTG+AGG + chr2_4:12410080-12410099 None:intergenic 30.0%
GAAATAAAGATGAATGTTGC+AGG + chr2_4:12410127-12410146 None:intergenic 30.0%
CCGTTGGAAAATAAATCAAA+TGG + chr2_4:12410191-12410210 None:intergenic 30.0%
GTAGAGCACACAAAAATTAA+AGG + chr2_4:12410304-12410323 None:intergenic 30.0%
! GTCTCAAGTTCAATGTTTTA+CGG - chr2_4:12410529-12410548 Msa0315850:intron 30.0%
TATATCTACGAAATATACCG+AGG - chr2_4:12410716-12410735 Msa0315850:intron 30.0%
!! TAATTTTTGTCGATTGTCGA+GGG - chr2_4:12410906-12410925 Msa0315850:intron 30.0%
!!! AAAAGGAGAGTTATTTTGAG+AGG - chr2_4:12411126-12411145 Msa0315850:intron 30.0%
!!! AAAGGAGAGTTATTTTGAGA+GGG - chr2_4:12411127-12411146 Msa0315850:intron 30.0%
!!! CTTCGGAATTTTTTTGTTGA+CGG + chr2_4:12411192-12411211 None:intergenic 30.0%
!! ATTTGGAGCATTTTCGATTT+CGG + chr2_4:12411232-12411251 None:intergenic 30.0%
!!! CGTTCAATTTCTGAGATTTT+AGG + chr2_4:12411278-12411297 None:intergenic 30.0%
AAATCTCAGAAATTGAACGA+CGG - chr2_4:12411279-12411298 Msa0315850:intron 30.0%
TTATCAATTACATCCATCAC+CGG + chr2_4:12411724-12411743 None:intergenic 30.0%
! TGATGATGATGATGATGAAG+AGG - chr2_4:12402927-12402946 Msa0315850:intron 35.0%
! GAGTTGGATAATCTTTTGGT+TGG - chr2_4:12402997-12403016 Msa0315850:intron 35.0%
TTAAGCTGAAATCACGATGA+AGG - chr2_4:12403248-12403267 Msa0315850:intron 35.0%
AAATCACGATGAAGGAATGT+TGG - chr2_4:12403256-12403275 Msa0315850:intron 35.0%
AAGAATGCTTCTGCAAAAAC+TGG - chr2_4:12403397-12403416 Msa0315850:intron 35.0%
ACCTGTTTGAGCTTATTTAC+TGG - chr2_4:12403531-12403550 Msa0315850:intron 35.0%
ACCAGTAAATAAGCTCAAAC+AGG + chr2_4:12403535-12403554 None:intergenic 35.0%
! TAAATACACAAGGGCATGTT+TGG + chr2_4:12403821-12403840 None:intergenic 35.0%
GTTGCAAAATTGTGCAACTA+CGG - chr2_4:12404343-12404362 Msa0315850:intron 35.0%
!! CTTAGCTTGTCCTGTAAATT+GGG - chr2_4:12404386-12404405 Msa0315850:intron 35.0%
CAAGATAATTCAGTAGGATG+GGG + chr2_4:12404861-12404880 None:intergenic 35.0%
CCAAGATAATTCAGTAGGAT+GGG + chr2_4:12404862-12404881 None:intergenic 35.0%
ACCAAGATAATTCAGTAGGA+TGG + chr2_4:12404863-12404882 None:intergenic 35.0%
CCATACCAAGATAATTCAGT+AGG + chr2_4:12404867-12404886 None:intergenic 35.0%
CCTACTGAATTATCTTGGTA+TGG - chr2_4:12404864-12404883 Msa0315850:intron 35.0%
ATGAGATTGTGTTTCCATTC+GGG + chr2_4:12405442-12405461 None:intergenic 35.0%
! TCATTTCCAGAGTTGATTCA+AGG - chr2_4:12405600-12405619 Msa0315850:intron 35.0%
AGTATTCCTTGAATCAACTC+TGG + chr2_4:12405609-12405628 None:intergenic 35.0%
! ATGTTGCGATATGAAAGCAT+TGG + chr2_4:12405756-12405775 None:intergenic 35.0%
! TTCTGACGTGGATAATCTTT+TGG - chr2_4:12405967-12405986 Msa0315850:intron 35.0%
GAAGAAGCCAACATATTATC+AGG + chr2_4:12406374-12406393 None:intergenic 35.0%
CTAAACATGGGGGAAATTAA+AGG + chr2_4:12406660-12406679 None:intergenic 35.0%
ATAGGAGACTCACTAAACAT+GGG + chr2_4:12406672-12406691 None:intergenic 35.0%
TGTGTACCATTGAAAGATGA+AGG - chr2_4:12406740-12406759 Msa0315850:CDS 35.0%
! CTTTTGCCTTCATCTTTCAA+TGG + chr2_4:12406749-12406768 None:intergenic 35.0%
ACTTCCTCAAATTGTTAGTG+TGG - chr2_4:12406779-12406798 Msa0315850:CDS 35.0%
CATTCCACACTAACAATTTG+AGG + chr2_4:12406786-12406805 None:intergenic 35.0%
GAAGAAGCCAATGTATTATC+AGG + chr2_4:12406929-12406948 None:intergenic 35.0%
!! ATACATTGGCTTCTTCTTGT+TGG - chr2_4:12406933-12406952 Msa0315850:intron 35.0%
CTCAAATGGTTGTGAATGAA+TGG - chr2_4:12407229-12407248 Msa0315850:intron 35.0%
ACTACTTAGGGGACAAAAAA+GGG + chr2_4:12407458-12407477 None:intergenic 35.0%
AACTACTTAGGGGACAAAAA+AGG + chr2_4:12407459-12407478 None:intergenic 35.0%
CAAGGATACTAACTACTTAG+GGG + chr2_4:12407469-12407488 None:intergenic 35.0%
AATTAGAGCTTATCGTGTGA+TGG - chr2_4:12407564-12407583 Msa0315850:intron 35.0%
ATTAGAGCTTATCGTGTGAT+GGG - chr2_4:12407565-12407584 Msa0315850:intron 35.0%
AAAGGTCCAAGAAGAATGAA+AGG - chr2_4:12407714-12407733 Msa0315850:intron 35.0%
AAGTAGCCTTTCATTCTTCT+TGG + chr2_4:12407723-12407742 None:intergenic 35.0%
GAAGAATGAAAGGCTACTTA+TGG - chr2_4:12407724-12407743 Msa0315850:intron 35.0%
GGAGAGTTTGTCACATAATA+AGG - chr2_4:12407745-12407764 Msa0315850:intron 35.0%
! TTGATAACCCAACTCAGATT+TGG + chr2_4:12407791-12407810 None:intergenic 35.0%
! GATCTGTTTAGTTCAAGCAA+CGG - chr2_4:12407836-12407855 Msa0315850:intron 35.0%
! ATCTGTTTAGTTCAAGCAAC+GGG - chr2_4:12407837-12407856 Msa0315850:intron 35.0%
! GGGAAAGTGAGGAATTTTAA+TGG - chr2_4:12407857-12407876 Msa0315850:intron 35.0%
!! AGTGAGGAATTTTAATGGAG+GGG - chr2_4:12407862-12407881 Msa0315850:intron 35.0%
!!! AGTCATTCATGGTTTTGAGT+TGG - chr2_4:12407911-12407930 Msa0315850:intron 35.0%
TTGTGTTCAGAAAACAGAGA+TGG - chr2_4:12408062-12408081 Msa0315850:intron 35.0%
!! AAGAAGCATTCTTTGTTCAG+TGG + chr2_4:12408143-12408162 None:intergenic 35.0%
AATATAGCAAGAACCAGTTC+TGG + chr2_4:12408203-12408222 None:intergenic 35.0%
CTAAAAATGGGGGAAACTAA+AGG + chr2_4:12408447-12408466 None:intergenic 35.0%
TACTTAGGGGACTAAAAATG+GGG + chr2_4:12408458-12408477 None:intergenic 35.0%
CCATGATACTCATTACTTAG+GGG + chr2_4:12408471-12408490 None:intergenic 35.0%
AATCAGGGTTTATTGCACAA+TGG - chr2_4:12408611-12408630 Msa0315850:intron 35.0%
TTGCACAATGGAGAAACATT+AGG - chr2_4:12408623-12408642 Msa0315850:CDS 35.0%
TGCACAATGGAGAAACATTA+GGG - chr2_4:12408624-12408643 Msa0315850:CDS 35.0%
AGTGTAAGACGTTGTCATAT+TGG - chr2_4:12408804-12408823 Msa0315850:CDS 35.0%
GAAGAATGAGGGATTTAACT+AGG + chr2_4:12408849-12408868 None:intergenic 35.0%
GACCAAATTGAATTGTGACT+TGG - chr2_4:12408946-12408965 Msa0315850:CDS 35.0%
! ATGTTATTCCCCCTTCATTT+TGG + chr2_4:12408979-12408998 None:intergenic 35.0%
GGAAGTGATGATAAAGAAGA+AGG + chr2_4:12409006-12409025 None:intergenic 35.0%
GGTTATTGAGGTTTGAATAC+GGG + chr2_4:12409041-12409060 None:intergenic 35.0%
ATGGAGAAACTTGGTTATTG+AGG + chr2_4:12409053-12409072 None:intergenic 35.0%
!! ATCAGTTAAGAAGCATCACT+TGG + chr2_4:12409076-12409095 None:intergenic 35.0%
AACTGATGTTCATTGCTATC+AGG - chr2_4:12409089-12409108 Msa0315850:intron 35.0%
!!! CACGGTATTTTTTTTTGGAG+AGG + chr2_4:12409195-12409214 None:intergenic 35.0%
AAGGATATCTCGTGATTGAA+CGG - chr2_4:12409228-12409247 Msa0315850:intron 35.0%
TGAAATGAAATGAAGCTTGG+TGG + chr2_4:12409255-12409274 None:intergenic 35.0%
!! AATTGGGGATTTTAATCTGC+AGG - chr2_4:12409316-12409335 Msa0315850:intron 35.0%
GTAACTCATTATCATGGCAA+AGG - chr2_4:12409673-12409692 Msa0315850:intron 35.0%
! CATTGCAATTTTGCAAAGAG+TGG - chr2_4:12409994-12410013 Msa0315850:intron 35.0%
AGAGTGGATACAGAAGAAAA+TGG - chr2_4:12410010-12410029 Msa0315850:intron 35.0%
TGGATACAGAAGAAAATGGA+GGG - chr2_4:12410014-12410033 Msa0315850:intron 35.0%
GTGTGCTCTACTTCAAAATT+TGG - chr2_4:12410313-12410332 Msa0315850:intron 35.0%
AACGAAGTTGTAAATCCACT+TGG - chr2_4:12410450-12410469 Msa0315850:intron 35.0%
ACGAAGTTGTAAATCCACTT+GGG - chr2_4:12410451-12410470 Msa0315850:intron 35.0%
!! CTTGAGAAGAGTATTATCCA+AGG + chr2_4:12410509-12410528 None:intergenic 35.0%
CTTGGATAATACTCTTCTCA+AGG - chr2_4:12410507-12410526 Msa0315850:intron 35.0%
! ACGGTGTCAATTTAACAACA+AGG - chr2_4:12410548-12410567 Msa0315850:intron 35.0%
!! CTAATTTTTGTCGATTGTCG+AGG - chr2_4:12410905-12410924 Msa0315850:intron 35.0%
AACTTGTAAGACACGCAAAA+TGG - chr2_4:12410929-12410948 Msa0315850:intron 35.0%
TTTAGGGATTCATTTCCGTT+CGG + chr2_4:12411261-12411280 None:intergenic 35.0%
TTTCGATTATCAACTCCTCA+GGG + chr2_4:12411336-12411355 None:intergenic 35.0%
ATTTCGATTATCAACTCCTC+AGG + chr2_4:12411337-12411356 None:intergenic 35.0%
GAAGAAGAAGAAGAAGAAGA+CGG - chr2_4:12405824-12405843 Msa0315850:intron 35.0%
TGTAATTGATAAGATACGCC+AGG - chr2_4:12411732-12411751 Msa0315850:CDS 35.0%
! GATAAACCAGCAGAAAGTTT+TGG + chr2_4:12411870-12411889 None:intergenic 35.0%
TTTCGATCATCAGTTCCACT+GGG + chr2_4:12402684-12402703 None:intergenic 40.0%
ATTTCGATCATCAGTTCCAC+TGG + chr2_4:12402685-12402704 None:intergenic 40.0%
TGTTTGAGTCAACTCTAGCA+AGG + chr2_4:12402708-12402727 None:intergenic 40.0%
GATGCGAATTGAAGGATTTG+CGG + chr2_4:12402858-12402877 None:intergenic 40.0%
!! GGCTGAGTTGGATAATCTTT+TGG - chr2_4:12402993-12403012 Msa0315850:intron 40.0%
! TTGGTGTTCGGTCTATCAAA+AGG - chr2_4:12403016-12403035 Msa0315850:CDS 40.0%
TGGTGTTCGGTCTATCAAAA+GGG - chr2_4:12403017-12403036 Msa0315850:CDS 40.0%
TCGGTCTATCAAAAGGGAAT+TGG - chr2_4:12403023-12403042 Msa0315850:CDS 40.0%
! AGTTGATACGCTAGCTATGA+AGG - chr2_4:12403056-12403075 Msa0315850:CDS 40.0%
GGCTTATATTCACAGGTTCT+CGG - chr2_4:12403626-12403645 Msa0315850:intron 40.0%
GCTTATATTCACAGGTTCTC+GGG - chr2_4:12403627-12403646 Msa0315850:intron 40.0%
TCACTCAGGGGACTAAAAAT+GGG + chr2_4:12403935-12403954 None:intergenic 40.0%
ATCACTCAGGGGACTAAAAA+TGG + chr2_4:12403936-12403955 None:intergenic 40.0%
AAAATGTTAACGAGTGCCTC+CGG - chr2_4:12404106-12404125 Msa0315850:intron 40.0%
!! AAACTGCTTAAAAAGTGCCC+CGG + chr2_4:12404128-12404147 None:intergenic 40.0%
AAATTGTGCAACTACGGATG+TGG - chr2_4:12404349-12404368 Msa0315850:intron 40.0%
CCAATTTACAGGACAAGCTA+AGG + chr2_4:12404388-12404407 None:intergenic 40.0%
!! CCTTAGCTTGTCCTGTAAAT+TGG - chr2_4:12404385-12404404 Msa0315850:intron 40.0%
CCCATCCTACTGAATTATCT+TGG - chr2_4:12404859-12404878 Msa0315850:intron 40.0%
TTGAAACTCACACACACAAG+TGG - chr2_4:12405002-12405021 Msa0315850:intron 40.0%
!! TCACGATCGATTTTCGAACT+CGG + chr2_4:12405035-12405054 None:intergenic 40.0%
! TACATAACATATTCGGTGGC+AGG - chr2_4:12405206-12405225 Msa0315850:intron 40.0%
! ACATAACATATTCGGTGGCA+GGG - chr2_4:12405207-12405226 Msa0315850:intron 40.0%
ATTCGGGTCTCCAAATTGAA+AGG - chr2_4:12405405-12405424 Msa0315850:intron 40.0%
CGGTATGTGTCCTTTCAATT+TGG + chr2_4:12405418-12405437 None:intergenic 40.0%
AAGCTTAACGAGAGCAATGA+CGG - chr2_4:12405517-12405536 Msa0315850:intron 40.0%
GAATTCCATCGTTTGCAAAC+GGG + chr2_4:12405644-12405663 None:intergenic 40.0%
CGAATTCCATCGTTTGCAAA+CGG + chr2_4:12405645-12405664 None:intergenic 40.0%
!! AGCTCTGAAAGTGCTTCTTA+AGG + chr2_4:12405688-12405707 None:intergenic 40.0%
CATCAAAGATCTAACCTCCA+AGG - chr2_4:12405718-12405737 Msa0315850:intron 40.0%
! GATGGATTTAGTTTCTGACG+TGG - chr2_4:12405955-12405974 Msa0315850:intron 40.0%
ATTGGGTTTGCATATCAACG+TGG + chr2_4:12406030-12406049 None:intergenic 40.0%
CATTATATCCTCCAGTGCTT+GGG + chr2_4:12406053-12406072 None:intergenic 40.0%
TCATTATATCCTCCAGTGCT+TGG + chr2_4:12406054-12406073 None:intergenic 40.0%
TGCAAACTCATTTGCACTTG+TGG - chr2_4:12406514-12406533 Msa0315850:intron 40.0%
! AAAGAGAATGGGTTTGCACA+AGG + chr2_4:12406636-12406655 None:intergenic 40.0%
TAGGAGACTCACTAAACATG+GGG + chr2_4:12406671-12406690 None:intergenic 40.0%
CATAGGAGACTCACTAAACA+TGG + chr2_4:12406673-12406692 None:intergenic 40.0%
ATTGGGGTTGTGTTCAGATA+TGG - chr2_4:12407200-12407219 Msa0315850:intron 40.0%
AGATATGGTTCTCGCTCAAA+TGG - chr2_4:12407215-12407234 Msa0315850:intron 40.0%
TAAGTCATGTGCAGTTGTGA+TGG - chr2_4:12407270-12407289 Msa0315850:intron 40.0%
TACTTAGGGGACAAAAAAGG+GGG + chr2_4:12407456-12407475 None:intergenic 40.0%
CTACTTAGGGGACAAAAAAG+GGG + chr2_4:12407457-12407476 None:intergenic 40.0%
! AAAAAGCGCACAATCGCAAT+TGG - chr2_4:12407536-12407555 Msa0315850:intron 40.0%
TTAGAGCTTATCGTGTGATG+GGG - chr2_4:12407566-12407585 Msa0315850:intron 40.0%
! TCGTGTGATGGGGAAAAATT+AGG - chr2_4:12407576-12407595 Msa0315850:intron 40.0%
! CGTGTGATGGGGAAAAATTA+GGG - chr2_4:12407577-12407596 Msa0315850:intron 40.0%
AGCTTAGACCAAATCTGAGT+TGG - chr2_4:12407780-12407799 Msa0315850:intron 40.0%
GCTTAGACCAAATCTGAGTT+GGG - chr2_4:12407781-12407800 Msa0315850:intron 40.0%
GAATGGTGAAGAGTCATTCA+TGG - chr2_4:12407900-12407919 Msa0315850:intron 40.0%
AAAGAGGGGTTTATTGCACA+AGG + chr2_4:12408419-12408438 None:intergenic 40.0%
ACTTAGGGGACTAAAAATGG+GGG + chr2_4:12408457-12408476 None:intergenic 40.0%
CCCCTAAGTAATGAGTATCA+TGG - chr2_4:12408468-12408487 Msa0315850:intron 40.0%
ACTTTCAGGGACCAAAATGA+TGG + chr2_4:12408787-12408806 None:intergenic 40.0%
GACAACGTCTTACACTTTCA+GGG + chr2_4:12408800-12408819 None:intergenic 40.0%
TGACAACGTCTTACACTTTC+AGG + chr2_4:12408801-12408820 None:intergenic 40.0%
TTGGATAGGGACCAAAATGA+AGG - chr2_4:12408965-12408984 Msa0315850:CDS 40.0%
TGGATAGGGACCAAAATGAA+GGG - chr2_4:12408966-12408985 Msa0315850:CDS 40.0%
ATCACTTGGATGGAGAAACT+TGG + chr2_4:12409062-12409081 None:intergenic 40.0%
!! GTTAAGAAGCATCACTTGGA+TGG + chr2_4:12409072-12409091 None:intergenic 40.0%
ATTGCATTCTCTGTACTCCT+TGG - chr2_4:12409141-12409160 Msa0315850:intron 40.0%
!! GTTATGTGTTGGCTTTACCA+AGG + chr2_4:12409161-12409180 None:intergenic 40.0%
! TCCTTTTCTCAACCCTTTCA+CGG + chr2_4:12409213-12409232 None:intergenic 40.0%
ATTATCATGGCAAAGGACCT+AGG - chr2_4:12409680-12409699 Msa0315850:intron 40.0%
!! ATTACCTTTAGGATTGGCCT+AGG + chr2_4:12409700-12409719 None:intergenic 40.0%
!! CGTTGGTTTAATTGGACGAT+TGG + chr2_4:12409794-12409813 None:intergenic 40.0%
TAGTGAACGTGAGTACATGA+CGG + chr2_4:12409962-12409981 None:intergenic 40.0%
GTGGATACAGAAGAAAATGG+AGG - chr2_4:12410013-12410032 Msa0315850:intron 40.0%
! CTTCATTGTTGGCTGTTACA+TGG - chr2_4:12410049-12410068 Msa0315850:intron 40.0%
TTGCAGGTTTACTGTTCTTC+GGG + chr2_4:12410111-12410130 None:intergenic 40.0%
GTTGCAGGTTTACTGTTCTT+CGG + chr2_4:12410112-12410131 None:intergenic 40.0%
AGTTGTAAATCCACTTGGGT+TGG - chr2_4:12410455-12410474 Msa0315850:intron 40.0%
! ATGATCTTGGCTTGAAACCT+TGG - chr2_4:12410489-12410508 Msa0315850:intron 40.0%
CTACGAAATATACCGAGGTT+TGG - chr2_4:12410721-12410740 Msa0315850:intron 40.0%
CATATTGAGCTACCAAACCT+CGG + chr2_4:12410736-12410755 None:intergenic 40.0%
AGATCGAACATTGACGATGT+AGG - chr2_4:12410982-12411001 Msa0315850:intron 40.0%
! CATGATTAGTCAGAGTGGTA+AGG + chr2_4:12411016-12411035 None:intergenic 40.0%
! ACAGACATGATTAGTCAGAG+TGG + chr2_4:12411021-12411040 None:intergenic 40.0%
TTAGGGATTCATTTCCGTTC+GGG + chr2_4:12411260-12411279 None:intergenic 40.0%
! TGCTTGACTCAACTCTAGAA+AGG + chr2_4:12411360-12411379 None:intergenic 40.0%
CAAGCAATCCTCAGGAATTA+AGG - chr2_4:12411374-12411393 Msa0315850:intron 40.0%
CAAACACACCTTAATTCCTG+AGG + chr2_4:12411385-12411404 None:intergenic 40.0%
TAAGGTGTGTTTGCAAGTTG+TGG - chr2_4:12411392-12411411 Msa0315850:intron 40.0%
TTTCAGTGAACGCTCTTAGA+AGG + chr2_4:12411456-12411475 None:intergenic 40.0%
! AATCGCCGTTCTACTTGTTA+CGG - chr2_4:12411474-12411493 Msa0315850:CDS 40.0%
AAAGGCCGTAACAAGTAGAA+CGG + chr2_4:12411482-12411501 None:intergenic 40.0%
! GATGACGATGATGATGTAGA+AGG - chr2_4:12411676-12411695 Msa0315850:CDS 40.0%
AGAAGGAGAAGATGTTGAAG+AGG - chr2_4:12411693-12411712 Msa0315850:CDS 40.0%
AGATGTTGAAGAGGAAGAAC+CGG - chr2_4:12411702-12411721 Msa0315850:CDS 40.0%
TGATAAGATACGCCAGGAAA+AGG - chr2_4:12411738-12411757 Msa0315850:CDS 40.0%
CAAACAATCCTCTGCAGTTG+AGG - chr2_4:12402722-12402741 Msa0315850:CDS 45.0%
AGTTGAGGTCAGTATGCAAG+TGG - chr2_4:12402737-12402756 Msa0315850:CDS 45.0%
GGAAAGTAGATCGGTGATGT+CGG + chr2_4:12402821-12402840 None:intergenic 45.0%
CATCACCGATCTACTTTCCA+CGG - chr2_4:12402822-12402841 Msa0315850:intron 45.0%
GGGAATCTGATGCGAATTGA+AGG + chr2_4:12402866-12402885 None:intergenic 45.0%
TTCTTCTCCTTGAAGCTGGT+CGG + chr2_4:12402887-12402906 None:intergenic 45.0%
CTTCTTCTTCTCCTTGAAGC+TGG + chr2_4:12402891-12402910 None:intergenic 45.0%
! GATGAATAGGTTGGCTGAGT+TGG - chr2_4:12402981-12403000 Msa0315850:intron 45.0%
TACACGTAGCGCATAGTAAC+AGG + chr2_4:12403784-12403803 None:intergenic 45.0%
ACTCAGGGGACTAAAAATGG+GGG + chr2_4:12403933-12403952 None:intergenic 45.0%
CACTCAGGGGACTAAAAATG+GGG + chr2_4:12403934-12403953 None:intergenic 45.0%
AAATGTTAACGAGTGCCTCC+GGG - chr2_4:12404107-12404126 Msa0315850:intron 45.0%
TCTTGTTAACGAGTGCATCC+GGG + chr2_4:12404256-12404275 None:intergenic 45.0%
! GTCTTGTTAACGAGTGCATC+CGG + chr2_4:12404257-12404276 None:intergenic 45.0%
AAACTCACACACACAAGTGG+AGG - chr2_4:12405005-12405024 Msa0315850:intron 45.0%
AACTCACACACACAAGTGGA+GGG - chr2_4:12405006-12405025 Msa0315850:intron 45.0%
GATTGTGTTTCCATTCGGGT+CGG + chr2_4:12405438-12405457 None:intergenic 45.0%
CAAGGAATACTCTGCAACTG+AGG - chr2_4:12405618-12405637 Msa0315850:intron 45.0%
! GCACTTTCAGAGCTTGTTCA+CGG - chr2_4:12405694-12405713 Msa0315850:intron 45.0%
AGATCTAACCTCCAAGGCTT+TGG - chr2_4:12405724-12405743 Msa0315850:intron 45.0%
ATTGGACTGTTCCAAAGCCT+TGG + chr2_4:12405738-12405757 None:intergenic 45.0%
TCTTCTTCTTCCTCCTCTTG+AGG + chr2_4:12405800-12405819 None:intergenic 45.0%
!! CGAATTGAAACGGGTGTTGA+TGG - chr2_4:12405937-12405956 Msa0315850:intron 45.0%
AGGAGACTCACTAAACATGG+GGG + chr2_4:12406670-12406689 None:intergenic 45.0%
GGATGTGAAATGCTGCTGAA+TGG - chr2_4:12407883-12407902 Msa0315850:intron 45.0%
!!! TTCATGGTTTTGAGTTGGCC+TGG - chr2_4:12407916-12407935 Msa0315850:intron 45.0%
!!! TCATGGTTTTGAGTTGGCCT+GGG - chr2_4:12407917-12407936 Msa0315850:intron 45.0%
!! ATACACCGGCTTCTTCTTGT+TGG - chr2_4:12408173-12408192 Msa0315850:intron 45.0%
GTGTTCCAACAAGAAGAAGC+CGG + chr2_4:12408181-12408200 None:intergenic 45.0%
TCTTGTTGGAACACCAGAAC+TGG - chr2_4:12408187-12408206 Msa0315850:intron 45.0%
! AGGAGGGCAAACCATCATTT+TGG - chr2_4:12408773-12408792 Msa0315850:CDS 45.0%
GGATAGGGACCAAAATGAAG+GGG - chr2_4:12408967-12408986 Msa0315850:CDS 45.0%
GATAGGGACCAAAATGAAGG+GGG - chr2_4:12408968-12408987 Msa0315850:CDS 45.0%
GAATACGGGAGAGAGATGTT+GGG + chr2_4:12409027-12409046 None:intergenic 45.0%
TGAATACGGGAGAGAGATGT+TGG + chr2_4:12409028-12409047 None:intergenic 45.0%
ACCGTGAAAGGGTTGAGAAA+AGG - chr2_4:12409209-12409228 Msa0315850:intron 45.0%
GTCAAACAAAGCTAGACCGT+TGG + chr2_4:12410207-12410226 None:intergenic 45.0%
!! TAAATCCACTTGGGTTGGTC+TGG - chr2_4:12410460-12410479 Msa0315850:intron 45.0%
ACTGAACATGATTCTCCCTG+AGG - chr2_4:12411318-12411337 Msa0315850:intron 45.0%
AGTTGAGTCAAGCAATCCTC+AGG - chr2_4:12411366-12411385 Msa0315850:intron 45.0%
CTCTTAGAAGGTGATTCTCC+AGG + chr2_4:12411444-12411463 None:intergenic 45.0%
TAAGATACGCCAGGAAAAGG+AGG - chr2_4:12411741-12411760 Msa0315850:CDS 45.0%
CAGAGATGACATTCAAGCTG+TGG - chr2_4:12411825-12411844 Msa0315850:CDS 45.0%
AGATGACATTCAAGCTGTGG+AGG - chr2_4:12411828-12411847 Msa0315850:CDS 45.0%
GTGTCTCCAAAACTTTCTGC+TGG - chr2_4:12411861-12411880 Msa0315850:CDS 45.0%
!!! ATTTAAATTTATATTTTAGT+GGG + chr2_4:12404555-12404574 None:intergenic 5.0%
!!! AATTTAAATTTATATTTTAG+TGG + chr2_4:12404556-12404575 None:intergenic 5.0%
!!! TGATAATTTAATTTTTTTTA+GGG + chr2_4:12405343-12405362 None:intergenic 5.0%
!!! ATGATAATTTAATTTTTTTT+AGG + chr2_4:12405344-12405363 None:intergenic 5.0%
!!! TTTATTTTTATTTCAAAATT+TGG - chr2_4:12410263-12410282 Msa0315850:intron 5.0%
!!! ATATTTATATATTTTTTTAG+GGG - chr2_4:12411103-12411122 Msa0315850:intron 5.0%
CATACTGACCTCAACTGCAG+AGG + chr2_4:12402733-12402752 None:intergenic 50.0%
TGAGGTCAGTATGCAAGTGG+TGG - chr2_4:12402740-12402759 Msa0315850:CDS 50.0%
TCTTCTCCTTGAAGCTGGTC+GGG + chr2_4:12402886-12402905 None:intergenic 50.0%
CGAAACGAGCGAGGATGAAT+AGG - chr2_4:12402968-12402987 Msa0315850:intron 50.0%
ACGAGCGAGGATGAATAGGT+TGG - chr2_4:12402972-12402991 Msa0315850:intron 50.0%
CCACGATACTCATCACTCAG+GGG + chr2_4:12403947-12403966 None:intergenic 50.0%
CCCACGATACTCATCACTCA+GGG + chr2_4:12403948-12403967 None:intergenic 50.0%
! CCCTGAGTGATGAGTATCGT+GGG - chr2_4:12403945-12403964 Msa0315850:intron 50.0%
ACCCACGATACTCATCACTC+AGG + chr2_4:12403949-12403968 None:intergenic 50.0%
AATGTTAACGAGTGCCTCCG+GGG - chr2_4:12404108-12404127 Msa0315850:intron 50.0%
!! GGGATGCTTAAAGAGTGTCC+CGG - chr2_4:12404235-12404254 Msa0315850:intron 50.0%
TACGGATGTGGATACCTCGA+TGG - chr2_4:12404361-12404380 Msa0315850:intron 50.0%
ACTCACACACACAAGTGGAG+GGG - chr2_4:12405007-12405026 Msa0315850:intron 50.0%
CTTAACGAGAGCAATGACGG+CGG - chr2_4:12405520-12405539 Msa0315850:intron 50.0%
ACCAAACACGGTGGTTCTTC+CGG - chr2_4:12405559-12405578 Msa0315850:intron 50.0%
ATCCTCCAGTGCTTGGGATT+GGG + chr2_4:12406047-12406066 None:intergenic 50.0%
TATCCTCCAGTGCTTGGGAT+TGG + chr2_4:12406048-12406067 None:intergenic 50.0%
GTTCAAGCAACGGGAAAGTG+AGG - chr2_4:12407846-12407865 Msa0315850:intron 50.0%
! CAAGTTGGGCATGTGGATTG+TGG + chr2_4:12409365-12409384 None:intergenic 50.0%
! TTGCAAGCAAGTTGGGCATG+TGG + chr2_4:12409372-12409391 None:intergenic 50.0%
AGGACCTAGGCCAATCCTAA+AGG - chr2_4:12409693-12409712 Msa0315850:intron 50.0%
GGTCTGGTCATCGATGATCT+TGG - chr2_4:12410476-12410495 Msa0315850:intron 50.0%
TTTCCGTTCGGGTCGGAATT+TGG + chr2_4:12411249-12411268 None:intergenic 50.0%
GGATTCATTTCCGTTCGGGT+CGG + chr2_4:12411256-12411275 None:intergenic 50.0%
! AAATTGAACGACGGCGCTGA+TGG - chr2_4:12411288-12411307 Msa0315850:intron 50.0%
TGAAGAGGAAGAACCGGTGA+TGG - chr2_4:12411708-12411727 Msa0315850:CDS 50.0%
! AAGGAGCTACCTCCTTTTCC+TGG + chr2_4:12411753-12411772 None:intergenic 50.0%
GGAAAAGGAGGTAGCTCCTT+TGG - chr2_4:12411753-12411772 Msa0315850:intron 50.0%
TCCACTGGGAGAAACGTGGT+CGG + chr2_4:12402670-12402689 None:intergenic 55.0%
CAGTTCCACTGGGAGAAACG+TGG + chr2_4:12402674-12402693 None:intergenic 55.0%
TGTCGGCGAGCGATTTCTGA+AGG + chr2_4:12402804-12402823 None:intergenic 55.0%
GAAGGATTTGCGGTGTTCCG+CGG + chr2_4:12402848-12402867 None:intergenic 55.0%
CAGATTCCCGACCAGCTTCA+AGG - chr2_4:12402877-12402896 Msa0315850:intron 55.0%
AAGAAGCTGCGAAACGAGCG+AGG - chr2_4:12402959-12402978 Msa0315850:intron 55.0%
! CCCCTGAGTGATGAGTATCG+TGG - chr2_4:12403944-12403963 Msa0315850:intron 55.0%
!! CTGCTTAAAAAGTGCCCCGG+AGG + chr2_4:12404125-12404144 None:intergenic 55.0%
GGACAAGCTAAGGTCCATCG+AGG + chr2_4:12404378-12404397 None:intergenic 55.0%
AGGACACATACCGACCCGAA+TGG - chr2_4:12405425-12405444 Msa0315850:intron 55.0%
AGCAATGACGGCGGAAGCAA+CGG - chr2_4:12405529-12405548 Msa0315850:intron 55.0%
!! AACGGCGGTGTCACCAAACA+CGG - chr2_4:12405547-12405566 Msa0315850:intron 55.0%
TCCGGAAGAACCACCGTGTT+TGG + chr2_4:12405563-12405582 None:intergenic 55.0%
TGAGGCCCGTTTGCAAACGA+TGG - chr2_4:12405636-12405655 Msa0315850:intron 55.0%
GGACTGTTCCAAAGCCTTGG+AGG + chr2_4:12405735-12405754 None:intergenic 55.0%
TAACGCGGTCATGCCTCAAG+AGG - chr2_4:12405784-12405803 Msa0315850:intron 55.0%
GCAAACCCAATCCCAAGCAC+TGG - chr2_4:12406039-12406058 Msa0315850:intron 55.0%
!! AACCCAATCCCAAGCACTGG+AGG - chr2_4:12406042-12406061 Msa0315850:intron 55.0%
!! TTTGAGTTGGCCTGGGAAGC+AGG - chr2_4:12407924-12407943 Msa0315850:intron 55.0%
CATTGTGAAGCCTGCTTCCC+AGG + chr2_4:12407937-12407956 None:intergenic 55.0%
GATGACCAGACCAACCCAAG+TGG + chr2_4:12410468-12410487 None:intergenic 55.0%
GCTCCAAATTCCGACCCGAA+CGG - chr2_4:12411243-12411262 Msa0315850:intron 55.0%
ACCGACCACGTTTCTCCCAG+TGG - chr2_4:12402666-12402685 Msa0315850:CDS 60.0%
CGCGGCCGTGGAAAGTAGAT+CGG + chr2_4:12402830-12402849 None:intergenic 60.0%
CGATCTACTTTCCACGGCCG+CGG - chr2_4:12402828-12402847 Msa0315850:intron 60.0%
AATGACGGCGGAAGCAACGG+CGG - chr2_4:12405532-12405551 Msa0315850:intron 60.0%
!! TTGAACGACGGCGCTGATGG+CGG - chr2_4:12411291-12411310 Msa0315850:intron 60.0%
!! GGCGGTGTCACCAAACACGG+TGG - chr2_4:12405550-12405569 Msa0315850:intron 65.0%
CGCGGTCATGCCTCAAGAGG+AGG - chr2_4:12405787-12405806 Msa0315850:intron 65.0%
TTTGCGGTGTTCCGCGGCCG+TGG + chr2_4:12402842-12402861 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr2_4 gene 12402643 12411921 12402643 ID=Msa0315850;Name=Msa0315850
chr2_4 mRNA 12402643 12411921 12402643 ID=Msa0315850-mRNA-1;Parent=Msa0315850;Name=Msa0315850-mRNA-1;_AED=0.16;_eAED=0.16;_QI=0|0|0|1|0|0|8|0|482
chr2_4 exon 12411775 12411921 12411775 ID=Msa0315850-mRNA-1:exon:4827;Parent=Msa0315850-mRNA-1
chr2_4 exon 12411539 12411768 12411539 ID=Msa0315850-mRNA-1:exon:4826;Parent=Msa0315850-mRNA-1
chr2_4 exon 12411419 12411526 12411419 ID=Msa0315850-mRNA-1:exon:4825;Parent=Msa0315850-mRNA-1
chr2_4 exon 12408921 12409044 12408921 ID=Msa0315850-mRNA-1:exon:4824;Parent=Msa0315850-mRNA-1
chr2_4 exon 12408615 12408860 12408615 ID=Msa0315850-mRNA-1:exon:4823;Parent=Msa0315850-mRNA-1
chr2_4 exon 12406678 12406896 12406678 ID=Msa0315850-mRNA-1:exon:4822;Parent=Msa0315850-mRNA-1
chr2_4 exon 12403006 12403248 12403006 ID=Msa0315850-mRNA-1:exon:4821;Parent=Msa0315850-mRNA-1
chr2_4 exon 12402643 12402774 12402643 ID=Msa0315850-mRNA-1:exon:4820;Parent=Msa0315850-mRNA-1
chr2_4 CDS 12411775 12411921 12411775 ID=Msa0315850-mRNA-1:cds;Parent=Msa0315850-mRNA-1
chr2_4 CDS 12411539 12411768 12411539 ID=Msa0315850-mRNA-1:cds;Parent=Msa0315850-mRNA-1
chr2_4 CDS 12411419 12411526 12411419 ID=Msa0315850-mRNA-1:cds;Parent=Msa0315850-mRNA-1
chr2_4 CDS 12408921 12409044 12408921 ID=Msa0315850-mRNA-1:cds;Parent=Msa0315850-mRNA-1
chr2_4 CDS 12408615 12408860 12408615 ID=Msa0315850-mRNA-1:cds;Parent=Msa0315850-mRNA-1
chr2_4 CDS 12406678 12406896 12406678 ID=Msa0315850-mRNA-1:cds;Parent=Msa0315850-mRNA-1
chr2_4 CDS 12403006 12403248 12403006 ID=Msa0315850-mRNA-1:cds;Parent=Msa0315850-mRNA-1
chr2_4 CDS 12402643 12402774 12402643 ID=Msa0315850-mRNA-1:cds;Parent=Msa0315850-mRNA-1
Gene Sequence

>Msa0315850

ATGGCGGAAGCAACGGCGGAGTCACCGACCACGTTTCTCCCAGTGGAACTGATGATCGAAATCCTTGCTAGAGTTGACTCAAACAATCCTCTGCAGTTGAGGTCAGTATGCAAGTGGTGGAAAGCGCATGTTGTTGATGATCAATTCAAGCACCTTCAGAAATCGCTCGCCGACATCACCGATCTACTTTCCACGGCCGCGGAACACCGCAAATCCTTCAATTCGCATCAGATTCCCGACCAGCTTCAAGGAGAAGAAGAAGAAGAAGATGATGATGATGATGATGATGATGATGAAGAGGTTGACGAAGAAGAAGCTGCGAAACGAGCGAGGATGAATAGGTTGGCTGAGTTGGATAATCTTTTGGTTGGTGTTCGGGAATTGGAAATTATCAAAGTTGATACGCTAGCTATGAAGGATAGAATGAAGTGTCTTGAAAGTTTTCTGAAAATTTATCTCAAATCTGCAACATCTTCATCTTCTCACTTAACGAGAGCAATGACGGCGGAAGCAACGGCGGTGTCACCAAACACGGTGGTTCTTCCGGAAGAACTGATAATCGAAATCATTTCCAGAGTTGATTCAAGGAATACTCTGCAACTGAGGCCCAGCTTGTTCACGGACATCAAAGATCTAACCTCCAAGGCTTTGGAACAGTCCAATGCTTTCATATCGCAACATATTATAAATAACGCGGTCATGCCTCAAGAGGAGGAAGAAGAAGATGCTGAAGAAGAAGAAGAAGAAGAAGAAGAAGATGCTGCTGTTGTTGAAGAAGAAGATGTTGTTGCTGCTGCTGTTGATGAAGAAGAAGATGTTGCTGCTGTTGATGAAGAAAAAGACGAATTGAAACGGGTGGGATTATGTCAACAATTCTATTTGGAAGAAGATTTAGAAATGGAAAGGTCCAAGAAGAATGAAAGGCTACTTATGGAGAGTTTGTCACATAATAAGGATGGGTGTTTAGAGCTTAGACCAAATCTGAGTTGGGTTATCAAATTGAATATGAATGTAGCTTCTAAGGATCTGTTTAGTTCAAGCAACGGGAAAGTGAGGAATTTTAATGGAGGGGATTCACTGAACATGATTCTCCCTGAGGAGTTGATAATCGAAATCCTTTCTAGAGTTGAGTCAAGCAATCCTCAGGAATTAAGGTGTGTTTGCAAGTTGTGGAAATCACTAGTTTTTGATATTCAATTCCTGGAGAATCACCTTCTAAGAGCGTTCACTGAAATCGCCGTTCTACTTGTTACGGCCTTTGAGAAATTAAAGTCTTTCAAGTCGCTTCAAGAAGAAGAAGAAGATGACGAAGAAGCAATTTTGAGGTATTTGAAAGGGAAATTTGAAACTATCAGAGATGACATTCAAGCTGTGGAGGATAGAGTCAAGTGTCTCCAAAACTTTCTGCTGGTTTATCTCAAGTCAGCAAAATCTTCATCTTCTTCTTAG

Protein sequence

>Msa0315850

MAEATAESPTTFLPVELMIEILARVDSNNPLQLRSVCKWWKAHVVDDQFKHLQKSLADITDLLSTAAEHRKSFNSHQIPDQLQGEEEEEDDDDDDDDDEEVDEEEAAKRARMNRLAELDNLLVGVRELEIIKVDTLAMKDRMKCLESFLKIYLKSATSSSSHLTRAMTAEATAVSPNTVVLPEELIIEIISRVDSRNTLQLRPSLFTDIKDLTSKALEQSNAFISQHIINNAVMPQEEEEEDAEEEEEEEEEDAAVVEEEDVVAAAVDEEEDVAAVDEEKDELKRVGLCQQFYLEEDLEMERSKKNERLLMESLSHNKDGCLELRPNLSWVIKLNMNVASKDLFSSSNGKVRNFNGGDSLNMILPEELIIEILSRVESSNPQELRCVCKLWKSLVFDIQFLENHLLRAFTEIAVLLVTAFEKLKSFKSLQEEEEDDEEAILRYLKGKFETIRDDIQAVEDRVKCLQNFLLVYLKSAKSSSSS*