AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0609220

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0609220 MtrunA17_Chr4g0046801 100.000 381 0 0 1 381 80 460 0.0 754
Msa0609220 MtrunA17_Chr4g0046801 99.738 381 1 0 1 381 4 384 0.0 752
Msa0609220 MtrunA17_Chr8g0342711 100.000 381 0 0 1 381 156 536 0.0 754
Msa0609220 MtrunA17_Chr8g0342711 99.738 381 1 0 1 381 4 384 0.0 751
Msa0609220 MtrunA17_Chr8g0342711 99.738 381 1 0 1 381 80 460 0.0 751
Msa0609220 MtrunA17_Chr4g0041641 100.000 381 0 0 1 381 81 461 0.0 753
Msa0609220 MtrunA17_Chr4g0041641 99.738 381 1 0 1 381 5 385 0.0 750
Msa0609220 MtrunA17_Chr4g0041701 99.738 381 1 0 1 381 153 533 0.0 752
Msa0609220 MtrunA17_Chr4g0041701 99.738 381 1 0 1 381 1 381 0.0 751
Msa0609220 MtrunA17_Chr4g0041701 99.738 381 1 0 1 381 77 457 0.0 751
Msa0609220 MtrunA17_Chr8g0377821 100.000 380 0 0 1 380 9 388 0.0 751
Msa0609220 MtrunA17_Chr4g0048591 99.475 381 2 0 1 381 156 536 0.0 749
Msa0609220 MtrunA17_Chr4g0048591 99.213 381 3 0 1 381 4 384 0.0 747
Msa0609220 MtrunA17_Chr4g0048591 99.213 381 3 0 1 381 80 460 0.0 747
Msa0609220 MtrunA17_Chr4g0046831 95.801 381 0 1 1 381 232 596 0.0 711
Msa0609220 MtrunA17_Chr4g0046831 95.276 381 2 1 1 381 4 368 0.0 704
Msa0609220 MtrunA17_Chr7g0274921 100.000 229 0 0 153 381 3 231 4.07e-163 456
Msa0609220 MtrunA17_Chr7g0274921 99.563 229 1 0 1 229 3 231 4.63e-162 453
Msa0609220 MtrunA17_Chr7g0274921 99.563 229 1 0 77 305 3 231 4.63e-162 453
Msa0609220 MtrunA17_Chr1g0181441 100.000 228 0 0 1 228 1 228 2.09e-161 452
Msa0609220 MtrunA17_Chr1g0181441 100.000 228 0 0 77 304 1 228 2.09e-161 452
Msa0609220 MtrunA17_Chr1g0181441 100.000 228 0 0 153 380 1 228 2.09e-161 452
Msa0609220 MtrunA17_Chr4g0041751 89.035 228 25 0 1 228 1 228 1.04e-141 402
Msa0609220 MtrunA17_Chr4g0041751 89.035 228 25 0 77 304 1 228 1.04e-141 402
Msa0609220 MtrunA17_Chr4g0041751 89.035 228 25 0 153 380 1 228 1.04e-141 402
Msa0609220 MtrunA17_Chr6g0475961 100.000 189 0 0 1 189 4 192 2.24e-131 374
Msa0609220 MtrunA17_Chr6g0475961 100.000 189 0 0 77 265 4 192 2.24e-131 374
Msa0609220 MtrunA17_Chr6g0475961 100.000 189 0 0 153 341 4 192 2.24e-131 374
Msa0609220 MtrunA17_Chr6g0475961 99.346 153 1 0 229 381 4 156 6.00e-104 305
Msa0609220 MtrunA17_Chr4g0037241 80.263 152 30 0 1 152 1 152 3.22e-81 245
Msa0609220 MtrunA17_Chr4g0037241 80.263 152 30 0 77 228 1 152 3.22e-81 245
Msa0609220 MtrunA17_Chr4g0037241 80.263 152 30 0 153 304 1 152 3.22e-81 245
Msa0609220 MtrunA17_Chr4g0037241 80.263 152 30 0 229 380 1 152 3.22e-81 245
Msa0609220 MtrunA17_Chr5g0444101 80.263 152 30 0 1 152 1 152 3.22e-81 245
Msa0609220 MtrunA17_Chr5g0444101 80.263 152 30 0 77 228 1 152 3.22e-81 245
Msa0609220 MtrunA17_Chr5g0444101 80.263 152 30 0 153 304 1 152 3.22e-81 245
Msa0609220 MtrunA17_Chr5g0444101 80.263 152 30 0 229 380 1 152 3.22e-81 245
Msa0609220 MtrunA17_Chr8g0374171 95.276 127 6 0 43 169 40 166 6.24e-72 222
Msa0609220 MtrunA17_Chr8g0374171 95.276 127 6 0 119 245 40 166 6.24e-72 222
Msa0609220 MtrunA17_Chr8g0374171 95.276 127 6 0 195 321 40 166 6.24e-72 222
Msa0609220 MtrunA17_Chr8g0374171 96.364 110 4 0 271 380 40 149 8.58e-61 193
Msa0609220 MtrunA17_Chr8g0374171 95.699 93 4 0 1 93 74 166 6.31e-47 157
Msa0609220 MtrunA17_Chr6g0475951 100.000 77 0 0 305 381 1 77 9.43e-48 156
Msa0609220 MtrunA17_Chr6g0475951 98.701 77 1 0 1 77 1 77 8.83e-47 154
Msa0609220 MtrunA17_Chr6g0475951 98.701 77 1 0 77 153 1 77 8.83e-47 154
Msa0609220 MtrunA17_Chr6g0475951 98.701 77 1 0 153 229 1 77 8.83e-47 154
Msa0609220 MtrunA17_Chr6g0475951 98.701 77 1 0 229 305 1 77 8.83e-47 154
Msa0609220 MtrunA17_Chr7g0266661 98.701 77 1 0 1 77 1 77 4.22e-47 157
Msa0609220 MtrunA17_Chr7g0266661 98.701 77 1 0 77 153 1 77 4.22e-47 157
Msa0609220 MtrunA17_Chr7g0266661 98.701 77 1 0 153 229 1 77 4.22e-47 157
Msa0609220 MtrunA17_Chr7g0266661 98.701 77 1 0 229 305 1 77 4.22e-47 157
Msa0609220 MtrunA17_Chr7g0266661 98.701 77 1 0 305 381 1 77 5.69e-47 156
Msa0609220 MtrunA17_Chr1g0178381 98.701 77 1 0 1 77 1 77 4.22e-47 157
Msa0609220 MtrunA17_Chr1g0178381 98.701 77 1 0 77 153 1 77 4.22e-47 157
Msa0609220 MtrunA17_Chr1g0178381 98.701 77 1 0 153 229 1 77 4.22e-47 157
Msa0609220 MtrunA17_Chr1g0178381 98.701 77 1 0 229 305 1 77 4.22e-47 157
Msa0609220 MtrunA17_Chr1g0178381 98.701 77 1 0 305 381 1 77 5.69e-47 156
Msa0609220 MtrunA17_Chr3g0127481 98.701 77 1 0 1 77 1 77 4.22e-47 157
Msa0609220 MtrunA17_Chr3g0127481 98.701 77 1 0 77 153 1 77 4.22e-47 157
Msa0609220 MtrunA17_Chr3g0127481 98.701 77 1 0 153 229 1 77 4.22e-47 157
Msa0609220 MtrunA17_Chr3g0127481 98.701 77 1 0 229 305 1 77 4.22e-47 157
Msa0609220 MtrunA17_Chr3g0127481 98.701 77 1 0 305 381 1 77 5.69e-47 156
Msa0609220 MtrunA17_Chr8g0380181 97.436 78 2 0 1 78 1 78 1.41e-46 156
Msa0609220 MtrunA17_Chr8g0380181 97.436 78 2 0 77 154 1 78 1.41e-46 156
Msa0609220 MtrunA17_Chr8g0380181 97.436 78 2 0 153 230 1 78 1.41e-46 156
Msa0609220 MtrunA17_Chr8g0380181 97.436 78 2 0 229 306 1 78 1.41e-46 156
Msa0609220 MtrunA17_Chr8g0380181 100.000 76 0 0 305 380 1 76 1.63e-46 156
Msa0609220 MtrunA17_Chr5g0413361 97.436 78 2 0 1 78 1 78 1.67e-46 156
Msa0609220 MtrunA17_Chr5g0413361 97.436 78 2 0 77 154 1 78 1.67e-46 156
Msa0609220 MtrunA17_Chr5g0413361 97.436 78 2 0 153 230 1 78 1.67e-46 156
Msa0609220 MtrunA17_Chr5g0413361 97.436 78 2 0 229 306 1 78 1.67e-46 156
Msa0609220 MtrunA17_Chr5g0413361 100.000 76 0 0 305 380 1 76 1.96e-46 156
Msa0609220 MtrunA17_Chr1g0169371 71.053 76 22 0 1 76 215 290 1.61e-26 107
Msa0609220 MtrunA17_Chr1g0169371 71.053 76 22 0 77 152 215 290 1.61e-26 107
Msa0609220 MtrunA17_Chr1g0169371 71.053 76 22 0 153 228 215 290 1.61e-26 107
Msa0609220 MtrunA17_Chr1g0169371 71.053 76 22 0 229 304 215 290 1.61e-26 107
Msa0609220 MtrunA17_Chr1g0169371 71.053 76 22 0 305 380 215 290 1.61e-26 107
Msa0609220 MtrunA17_Chr5g0433721 68.831 77 23 1 1 76 194 270 1.41e-25 104
Msa0609220 MtrunA17_Chr5g0433721 68.831 77 23 1 77 152 194 270 1.41e-25 104
Msa0609220 MtrunA17_Chr5g0433721 68.831 77 23 1 153 228 194 270 1.41e-25 104
Msa0609220 MtrunA17_Chr5g0433721 68.831 77 23 1 229 304 194 270 1.41e-25 104
Msa0609220 MtrunA17_Chr5g0433721 68.831 77 23 1 305 380 194 270 1.41e-25 104
Msa0609220 MtrunA17_Chr5g0433631 63.855 83 30 0 67 149 256 338 1.42e-25 105
Msa0609220 MtrunA17_Chr5g0433631 63.855 83 30 0 143 225 256 338 1.42e-25 105
Msa0609220 MtrunA17_Chr5g0433631 63.855 83 30 0 219 301 256 338 1.42e-25 105
Msa0609220 MtrunA17_Chr5g0433631 63.855 83 30 0 295 377 256 338 1.42e-25 105
Msa0609220 MtrunA17_Chr5g0433631 69.863 73 22 0 1 73 266 338 2.69e-25 105
Msa0609220 MtrunA17_Chr5g0424981 60.000 75 30 0 1 75 2 76 3.40e-23 92.0
Msa0609220 MtrunA17_Chr5g0424981 60.000 75 30 0 77 151 2 76 3.40e-23 92.0
Msa0609220 MtrunA17_Chr5g0424981 60.000 75 30 0 153 227 2 76 3.40e-23 92.0
Msa0609220 MtrunA17_Chr5g0424981 60.000 75 30 0 229 303 2 76 3.40e-23 92.0
Msa0609220 MtrunA17_Chr5g0424981 60.000 75 30 0 305 379 2 76 3.40e-23 92.0
Msa0609220 MtrunA17_Chr5g0428191 68.421 76 24 0 1 76 241 316 5.93e-23 98.2
Msa0609220 MtrunA17_Chr5g0428191 68.421 76 24 0 77 152 241 316 5.93e-23 98.2
Msa0609220 MtrunA17_Chr5g0428191 68.421 76 24 0 153 228 241 316 5.93e-23 98.2
Msa0609220 MtrunA17_Chr5g0428191 68.421 76 24 0 229 304 241 316 5.93e-23 98.2
Msa0609220 MtrunA17_Chr5g0428191 68.421 76 24 0 305 380 241 316 5.93e-23 98.2
Msa0609220 MtrunA17_Chr8g0374161 100.000 44 0 0 1 44 9 52 1.84e-22 89.4
Msa0609220 MtrunA17_Chr8g0374161 100.000 44 0 0 77 120 9 52 1.84e-22 89.4
Msa0609220 MtrunA17_Chr8g0374161 100.000 44 0 0 153 196 9 52 1.84e-22 89.4
Msa0609220 MtrunA17_Chr8g0374161 100.000 44 0 0 229 272 9 52 1.84e-22 89.4
Msa0609220 MtrunA17_Chr8g0374161 100.000 44 0 0 305 348 9 52 1.84e-22 89.4
Msa0609220 MtrunA17_Chr5g0433411 59.036 83 34 0 67 149 257 339 1.19e-21 94.7
Msa0609220 MtrunA17_Chr5g0433411 59.036 83 34 0 143 225 257 339 1.19e-21 94.7
Msa0609220 MtrunA17_Chr5g0433411 59.036 83 34 0 219 301 257 339 1.19e-21 94.7
Msa0609220 MtrunA17_Chr5g0433411 59.036 83 34 0 295 377 257 339 1.19e-21 94.7
Msa0609220 MtrunA17_Chr5g0433411 64.384 73 26 0 1 73 267 339 2.09e-21 94.0
Msa0609220 MtrunA17_Chr5g0433681 57.692 78 32 1 305 381 1 78 4.25e-21 86.7
Msa0609220 MtrunA17_Chr5g0433681 59.211 76 30 1 1 75 1 76 7.89e-21 85.9
Msa0609220 MtrunA17_Chr5g0433681 59.211 76 30 1 77 151 1 76 7.89e-21 85.9
Msa0609220 MtrunA17_Chr5g0433681 59.211 76 30 1 153 227 1 76 7.89e-21 85.9
Msa0609220 MtrunA17_Chr5g0433681 59.211 76 30 1 229 303 1 76 7.89e-21 85.9
Msa0609220 MtrunA17_Chr2g0298951 61.333 75 29 0 1 75 236 310 1.42e-20 91.3
Msa0609220 MtrunA17_Chr2g0298951 61.333 75 29 0 77 151 236 310 1.42e-20 91.3
Msa0609220 MtrunA17_Chr2g0298951 61.333 75 29 0 153 227 236 310 1.42e-20 91.3
Msa0609220 MtrunA17_Chr2g0298951 61.333 75 29 0 229 303 236 310 1.42e-20 91.3
Msa0609220 MtrunA17_Chr2g0298951 61.333 75 29 0 305 379 236 310 1.42e-20 91.3
Msa0609220 MtrunA17_Chr5g0433521 61.333 75 29 0 1 75 240 314 1.51e-20 91.3
Msa0609220 MtrunA17_Chr5g0433521 61.333 75 29 0 77 151 240 314 1.51e-20 91.3
Msa0609220 MtrunA17_Chr5g0433521 61.333 75 29 0 153 227 240 314 1.51e-20 91.3
Msa0609220 MtrunA17_Chr5g0433521 61.333 75 29 0 229 303 240 314 1.51e-20 91.3
Msa0609220 MtrunA17_Chr5g0433521 61.333 75 29 0 305 379 240 314 1.51e-20 91.3
Msa0609220 MtrunA17_Chr5g0433661 65.333 75 26 0 1 75 278 352 2.15e-20 91.3
Msa0609220 MtrunA17_Chr5g0433661 65.333 75 26 0 77 151 278 352 2.15e-20 91.3
Msa0609220 MtrunA17_Chr5g0433661 65.333 75 26 0 153 227 278 352 2.15e-20 91.3
Msa0609220 MtrunA17_Chr5g0433661 65.333 75 26 0 229 303 278 352 2.15e-20 91.3
Msa0609220 MtrunA17_Chr5g0433661 65.333 75 26 0 305 379 278 352 2.15e-20 91.3
Msa0609220 MtrunA17_Chr2g0298941 60.000 75 30 0 1 75 177 251 5.95e-20 88.2
Msa0609220 MtrunA17_Chr2g0298941 60.000 75 30 0 77 151 177 251 5.95e-20 88.2
Msa0609220 MtrunA17_Chr2g0298941 60.000 75 30 0 153 227 177 251 5.95e-20 88.2
Msa0609220 MtrunA17_Chr2g0298941 60.000 75 30 0 229 303 177 251 5.95e-20 88.2
Msa0609220 MtrunA17_Chr2g0298941 60.000 75 30 0 305 379 177 251 5.95e-20 88.2
Msa0609220 MtrunA17_Chr7g0259431 54.118 85 39 0 67 151 213 297 6.75e-20 89.0
Msa0609220 MtrunA17_Chr7g0259431 54.118 85 39 0 143 227 213 297 6.75e-20 89.0
Msa0609220 MtrunA17_Chr7g0259431 54.118 85 39 0 219 303 213 297 6.75e-20 89.0
Msa0609220 MtrunA17_Chr7g0259431 54.118 85 39 0 295 379 213 297 6.75e-20 89.0
Msa0609220 MtrunA17_Chr7g0259431 58.667 75 31 0 1 75 223 297 9.49e-20 88.6
Msa0609220 MtrunA17_Chr1g0169401 60.000 70 28 0 7 76 2 71 1.06e-19 82.4
Msa0609220 MtrunA17_Chr1g0169401 60.000 70 28 0 83 152 2 71 1.06e-19 82.4
Msa0609220 MtrunA17_Chr1g0169401 60.000 70 28 0 159 228 2 71 1.06e-19 82.4
Msa0609220 MtrunA17_Chr1g0169401 60.000 70 28 0 235 304 2 71 1.06e-19 82.4
Msa0609220 MtrunA17_Chr1g0169401 60.000 70 28 0 311 380 2 71 1.06e-19 82.4
Msa0609220 MtrunA17_Chr4g0003111 53.333 75 35 0 1 75 4 78 2.34e-18 79.0
Msa0609220 MtrunA17_Chr4g0003111 53.333 75 35 0 77 151 4 78 2.34e-18 79.0
Msa0609220 MtrunA17_Chr4g0003111 53.333 75 35 0 153 227 4 78 2.34e-18 79.0
Msa0609220 MtrunA17_Chr4g0003111 53.333 75 35 0 229 303 4 78 2.34e-18 79.0
Msa0609220 MtrunA17_Chr4g0003111 53.333 75 35 0 305 379 4 78 2.34e-18 79.0
Msa0609220 MtrunA17_Chr4g0041621 84.091 44 7 0 44 87 11 54 7.58e-18 77.0
Msa0609220 MtrunA17_Chr4g0041621 84.091 44 7 0 120 163 11 54 7.58e-18 77.0
Msa0609220 MtrunA17_Chr4g0041621 84.091 44 7 0 196 239 11 54 7.58e-18 77.0
Msa0609220 MtrunA17_Chr4g0041621 84.091 44 7 0 272 315 11 54 7.58e-18 77.0
Msa0609220 MtrunA17_Chr5g0433531 56.410 78 33 1 305 381 244 321 8.61e-18 83.6
Msa0609220 MtrunA17_Chr5g0433531 57.333 75 31 1 1 74 244 318 1.63e-17 82.8
Msa0609220 MtrunA17_Chr5g0433531 57.333 75 31 1 77 150 244 318 1.63e-17 82.8
Msa0609220 MtrunA17_Chr5g0433531 57.333 75 31 1 153 226 244 318 1.63e-17 82.8
Msa0609220 MtrunA17_Chr5g0433531 57.333 75 31 1 229 302 244 318 1.63e-17 82.8
Msa0609220 MtrunA17_Chr5g0433701 58.824 68 27 1 1 67 1 68 3.96e-17 75.9
Msa0609220 MtrunA17_Chr5g0433701 58.824 68 27 1 77 143 1 68 3.96e-17 75.9
Msa0609220 MtrunA17_Chr5g0433701 58.824 68 27 1 153 219 1 68 3.96e-17 75.9
Msa0609220 MtrunA17_Chr5g0433701 58.824 68 27 1 229 295 1 68 3.96e-17 75.9
Msa0609220 MtrunA17_Chr5g0433701 58.824 68 27 1 305 371 1 68 3.96e-17 75.9
Msa0609220 MtrunA17_Chr7g0223111 60.526 76 29 1 1 75 267 342 1.28e-16 80.1
Msa0609220 MtrunA17_Chr7g0223111 60.526 76 29 1 77 151 267 342 1.28e-16 80.1
Msa0609220 MtrunA17_Chr7g0223111 60.526 76 29 1 153 227 267 342 1.28e-16 80.1
Msa0609220 MtrunA17_Chr7g0223111 60.526 76 29 1 229 303 267 342 1.28e-16 80.1
Msa0609220 MtrunA17_Chr7g0223111 60.526 76 29 1 305 379 267 342 1.28e-16 80.1
Msa0609220 MtrunA17_Chr5g0424971 53.333 75 35 0 1 75 252 326 5.24e-16 78.2
Msa0609220 MtrunA17_Chr5g0424971 53.333 75 35 0 77 151 252 326 5.24e-16 78.2
Msa0609220 MtrunA17_Chr5g0424971 53.333 75 35 0 153 227 252 326 5.24e-16 78.2
Msa0609220 MtrunA17_Chr5g0424971 53.333 75 35 0 229 303 252 326 5.24e-16 78.2
Msa0609220 MtrunA17_Chr5g0424971 53.333 75 35 0 305 379 252 326 5.24e-16 78.2
Msa0609220 MtrunA17_Chr8g0346901 31.953 169 103 6 65 226 26 189 1.27e-15 78.6
Msa0609220 MtrunA17_Chr8g0346901 31.953 169 103 6 141 302 26 189 1.27e-15 78.6
Msa0609220 MtrunA17_Chr8g0346901 31.953 169 103 6 217 378 26 189 1.27e-15 78.6
Msa0609220 MtrunA17_Chr8g0346901 33.974 156 91 6 3 150 38 189 3.97e-15 77.0
Msa0609220 MtrunA17_Chr2g0322851 26.639 244 152 6 15 233 43 284 2.71e-15 75.9
Msa0609220 MtrunA17_Chr2g0322851 26.522 230 144 5 167 373 43 270 9.27e-15 73.9
Msa0609220 MtrunA17_Chr2g0322851 31.724 145 86 4 243 376 43 185 7.25e-11 62.4
Msa0609220 MtrunA17_Chr3g0126781 32.484 157 102 4 148 301 22 177 3.49e-15 77.0
Msa0609220 MtrunA17_Chr3g0126781 32.484 157 102 4 224 377 22 177 3.49e-15 77.0
Msa0609220 MtrunA17_Chr3g0126781 33.562 146 94 3 7 149 32 177 5.19e-15 76.6
Msa0609220 MtrunA17_Chr7g0275661 32.278 158 100 5 1 152 37 193 4.73e-14 73.6
Msa0609220 MtrunA17_Chr7g0275661 32.278 158 100 5 77 228 37 193 4.73e-14 73.6
Msa0609220 MtrunA17_Chr7g0275661 32.278 158 100 5 153 304 37 193 4.73e-14 73.6
Msa0609220 MtrunA17_Chr7g0275661 32.278 158 100 5 229 380 37 193 4.73e-14 73.6
Msa0609220 MtrunA17_Chr5g0433711 56.452 62 27 0 13 74 2 63 1.17e-13 65.5
Msa0609220 MtrunA17_Chr5g0433711 56.452 62 27 0 89 150 2 63 1.17e-13 65.5
Msa0609220 MtrunA17_Chr5g0433711 56.452 62 27 0 165 226 2 63 1.17e-13 65.5
Msa0609220 MtrunA17_Chr5g0433711 56.452 62 27 0 241 302 2 63 1.17e-13 65.5
Msa0609220 MtrunA17_Chr5g0433711 56.452 62 27 0 317 378 2 63 1.17e-13 65.5
Msa0609220 MtrunA17_Chr5g0433391 50.000 74 36 1 1 73 8 81 7.55e-13 63.9
Msa0609220 MtrunA17_Chr5g0433391 50.000 74 36 1 77 149 8 81 7.55e-13 63.9
Msa0609220 MtrunA17_Chr5g0433391 50.000 74 36 1 153 225 8 81 7.55e-13 63.9
Msa0609220 MtrunA17_Chr5g0433391 50.000 74 36 1 229 301 8 81 7.55e-13 63.9
Msa0609220 MtrunA17_Chr5g0433391 50.000 74 36 1 305 377 8 81 7.55e-13 63.9
Msa0609220 MtrunA17_Chr5g0433381 52.000 75 34 2 1 73 9 83 3.90e-12 62.0
Msa0609220 MtrunA17_Chr5g0433381 52.000 75 34 2 77 149 9 83 3.90e-12 62.0
Msa0609220 MtrunA17_Chr5g0433381 52.000 75 34 2 153 225 9 83 3.90e-12 62.0
Msa0609220 MtrunA17_Chr5g0433381 52.000 75 34 2 229 301 9 83 3.90e-12 62.0
Msa0609220 MtrunA17_Chr5g0433381 52.000 75 34 2 305 377 9 83 3.90e-12 62.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0609220 AT4G05320.1 100.000 381 0 0 1 381 1 381 0.0 753
Msa0609220 AT4G05320.6 100.000 381 0 0 1 381 1 381 0.0 753
Msa0609220 AT4G05320.2 100.000 381 0 0 1 381 77 457 0.0 753
Msa0609220 AT4G05320.2 99.738 381 1 0 1 381 1 381 0.0 751
Msa0609220 AT4G05320.3 100.000 381 0 0 1 381 1 381 0.0 753
Msa0609220 AT4G05320.4 100.000 381 0 0 1 381 77 457 0.0 753
Msa0609220 AT4G05320.4 99.738 381 1 0 1 381 1 381 0.0 751
Msa0609220 AT5G20620.1 100.000 380 0 0 1 380 1 380 0.0 751
Msa0609220 AT4G05320.5 100.000 305 0 0 77 381 1 305 0.0 604
Msa0609220 AT4G05320.5 99.672 305 1 0 1 305 1 305 0.0 602
Msa0609220 AT4G05320.8 100.000 305 0 0 77 381 1 305 0.0 604
Msa0609220 AT4G05320.8 99.672 305 1 0 1 305 1 305 0.0 602
Msa0609220 AT4G02890.3 100.000 305 0 0 77 381 1 305 0.0 604
Msa0609220 AT4G02890.3 99.672 305 1 0 1 305 1 305 0.0 602
Msa0609220 AT4G02890.4 100.000 305 0 0 77 381 1 305 0.0 604
Msa0609220 AT4G02890.4 99.672 305 1 0 1 305 1 305 0.0 602
Msa0609220 AT5G03240.3 100.000 304 0 0 1 304 1 304 0.0 602
Msa0609220 AT5G03240.3 100.000 304 0 0 77 380 1 304 0.0 602
Msa0609220 AT5G03240.2 100.000 304 0 0 1 304 1 304 0.0 602
Msa0609220 AT5G03240.2 100.000 304 0 0 77 380 1 304 0.0 602
Msa0609220 AT5G03240.1 100.000 304 0 0 1 304 1 304 0.0 602
Msa0609220 AT5G03240.1 100.000 304 0 0 77 380 1 304 0.0 602
Msa0609220 AT5G20620.2 100.000 304 0 0 1 304 1 304 0.0 602
Msa0609220 AT5G20620.2 100.000 304 0 0 77 380 1 304 0.0 602
Msa0609220 AT1G65350.1 93.711 318 5 2 1 304 1 317 0.0 570
Msa0609220 AT1G65350.1 93.711 318 5 2 77 380 1 317 0.0 570
Msa0609220 AT3G09790.2 78.149 389 71 4 1 375 3 391 0.0 567
Msa0609220 AT3G09790.2 74.619 394 82 5 1 380 79 468 0.0 541
Msa0609220 AT3G09790.2 71.939 392 92 4 1 378 238 625 5.56e-179 512
Msa0609220 AT3G09790.2 69.327 401 98 6 1 380 155 551 5.18e-174 499
Msa0609220 AT3G09790.2 89.474 152 16 0 229 380 3 154 1.70e-83 267
Msa0609220 AT3G09790.1 78.149 389 71 4 1 375 3 391 0.0 567
Msa0609220 AT3G09790.1 74.619 394 82 5 1 380 79 468 0.0 541
Msa0609220 AT3G09790.1 71.939 392 92 4 1 378 238 625 5.56e-179 512
Msa0609220 AT3G09790.1 69.327 401 98 6 1 380 155 551 5.18e-174 499
Msa0609220 AT3G09790.1 89.474 152 16 0 229 380 3 154 1.70e-83 267
Msa0609220 AT5G37640.1 90.196 306 29 1 76 380 2 307 0.0 538
Msa0609220 AT5G37640.1 90.492 305 28 1 1 304 3 307 0.0 538
Msa0609220 AT4G02890.2 100.000 229 0 0 153 381 1 229 1.42e-162 455
Msa0609220 AT4G02890.2 99.563 229 1 0 1 229 1 229 1.56e-161 452
Msa0609220 AT4G02890.2 99.563 229 1 0 77 305 1 229 1.56e-161 452
Msa0609220 AT4G02890.1 100.000 229 0 0 153 381 1 229 1.42e-162 455
Msa0609220 AT4G02890.1 99.563 229 1 0 1 229 1 229 1.56e-161 452
Msa0609220 AT4G02890.1 99.563 229 1 0 77 305 1 229 1.56e-161 452
Msa0609220 AT4G05050.2 100.000 229 0 0 153 381 1 229 1.42e-162 455
Msa0609220 AT4G05050.2 99.563 229 1 0 1 229 1 229 1.56e-161 452
Msa0609220 AT4G05050.2 99.563 229 1 0 77 305 1 229 1.56e-161 452
Msa0609220 AT4G05050.1 100.000 229 0 0 153 381 1 229 1.42e-162 455
Msa0609220 AT4G05050.1 99.563 229 1 0 1 229 1 229 1.56e-161 452
Msa0609220 AT4G05050.1 99.563 229 1 0 77 305 1 229 1.56e-161 452
Msa0609220 AT4G05050.3 100.000 229 0 0 153 381 1 229 1.42e-162 455
Msa0609220 AT4G05050.3 99.563 229 1 0 1 229 1 229 1.56e-161 452
Msa0609220 AT4G05050.3 99.563 229 1 0 77 305 1 229 1.56e-161 452
Msa0609220 AT1G55060.1 94.298 228 13 0 1 228 1 228 3.14e-152 429
Msa0609220 AT1G55060.1 94.298 228 13 0 77 304 1 228 3.14e-152 429
Msa0609220 AT1G55060.1 94.298 228 13 0 153 380 1 228 3.14e-152 429
Msa0609220 AT4G05320.7 100.000 153 0 0 229 381 1 153 8.41e-105 305
Msa0609220 AT4G05320.7 99.346 153 1 0 1 153 1 153 8.88e-104 303
Msa0609220 AT4G05320.7 99.346 153 1 0 77 229 1 153 8.88e-104 303
Msa0609220 AT4G05320.7 99.346 153 1 0 153 305 1 153 8.88e-104 303
Msa0609220 AT4G05050.4 100.000 153 0 0 229 381 1 153 8.41e-105 305
Msa0609220 AT4G05050.4 99.346 153 1 0 1 153 1 153 8.88e-104 303
Msa0609220 AT4G05050.4 99.346 153 1 0 77 229 1 153 8.88e-104 303
Msa0609220 AT4G05050.4 99.346 153 1 0 153 305 1 153 8.88e-104 303
Msa0609220 AT1G31340.1 81.046 153 29 0 229 381 1 153 1.05e-82 249
Msa0609220 AT1G31340.1 78.846 156 33 0 1 156 1 156 1.09e-81 247
Msa0609220 AT1G31340.1 78.846 156 33 0 77 232 1 156 1.09e-81 247
Msa0609220 AT1G31340.1 78.846 156 33 0 153 308 1 156 1.09e-81 247
Msa0609220 AT2G35635.1 79.739 153 31 0 1 153 1 153 6.24e-81 244
Msa0609220 AT2G35635.1 79.739 153 31 0 77 229 1 153 6.24e-81 244
Msa0609220 AT2G35635.1 79.739 153 31 0 153 305 1 153 6.24e-81 244
Msa0609220 AT2G35635.1 79.739 153 31 0 229 381 1 153 8.83e-81 244
Msa0609220 AT2G36170.1 98.701 77 1 0 1 77 1 77 6.08e-47 156
Msa0609220 AT2G36170.1 98.701 77 1 0 77 153 1 77 6.08e-47 156
Msa0609220 AT2G36170.1 98.701 77 1 0 153 229 1 77 6.08e-47 156
Msa0609220 AT2G36170.1 98.701 77 1 0 229 305 1 77 6.08e-47 156
Msa0609220 AT2G36170.1 98.701 77 1 0 305 381 1 77 7.53e-47 156
Msa0609220 AT3G52590.1 98.701 77 1 0 1 77 1 77 6.08e-47 156
Msa0609220 AT3G52590.1 98.701 77 1 0 77 153 1 77 6.08e-47 156
Msa0609220 AT3G52590.1 98.701 77 1 0 153 229 1 77 6.08e-47 156
Msa0609220 AT3G52590.1 98.701 77 1 0 229 305 1 77 6.08e-47 156
Msa0609220 AT3G52590.1 98.701 77 1 0 305 381 1 77 7.53e-47 156
Msa0609220 AT2G47110.2 97.436 78 2 0 1 78 1 78 2.16e-46 156
Msa0609220 AT2G47110.2 97.436 78 2 0 77 154 1 78 2.16e-46 156
Msa0609220 AT2G47110.2 97.436 78 2 0 153 230 1 78 2.16e-46 156
Msa0609220 AT2G47110.2 97.436 78 2 0 229 306 1 78 2.16e-46 156
Msa0609220 AT2G47110.2 100.000 76 0 0 305 380 1 76 2.50e-46 156
Msa0609220 AT2G47110.1 97.436 78 2 0 1 78 1 78 2.16e-46 156
Msa0609220 AT2G47110.1 97.436 78 2 0 77 154 1 78 2.16e-46 156
Msa0609220 AT2G47110.1 97.436 78 2 0 153 230 1 78 2.16e-46 156
Msa0609220 AT2G47110.1 97.436 78 2 0 229 306 1 78 2.16e-46 156
Msa0609220 AT2G47110.1 100.000 76 0 0 305 380 1 76 2.50e-46 156
Msa0609220 AT3G62250.1 97.436 78 2 0 1 78 1 78 2.25e-46 156
Msa0609220 AT3G62250.1 97.436 78 2 0 77 154 1 78 2.25e-46 156
Msa0609220 AT3G62250.1 97.436 78 2 0 153 230 1 78 2.25e-46 156
Msa0609220 AT3G62250.1 97.436 78 2 0 229 306 1 78 2.25e-46 156
Msa0609220 AT3G62250.1 100.000 76 0 0 305 380 1 76 2.67e-46 156
Msa0609220 AT1G23410.1 100.000 76 0 0 1 76 1 76 4.60e-46 155
Msa0609220 AT1G23410.1 100.000 76 0 0 77 152 1 76 4.60e-46 155
Msa0609220 AT1G23410.1 100.000 76 0 0 153 228 1 76 4.60e-46 155
Msa0609220 AT1G23410.1 100.000 76 0 0 229 304 1 76 4.60e-46 155
Msa0609220 AT1G23410.1 100.000 76 0 0 305 380 1 76 4.60e-46 155
Msa0609220 AT1G53930.1 49.091 165 54 7 8 149 1 158 4.52e-33 121
Msa0609220 AT1G53930.1 49.091 165 54 7 84 225 1 158 4.52e-33 121
Msa0609220 AT1G53930.1 49.091 165 54 7 160 301 1 158 4.52e-33 121
Msa0609220 AT1G53930.1 49.091 165 54 7 236 377 1 158 4.52e-33 121
Msa0609220 AT1G53930.1 75.342 73 18 0 1 73 86 158 3.14e-30 114
Msa0609220 AT1G53950.1 41.463 164 55 3 71 227 14 143 6.15e-26 102
Msa0609220 AT1G53950.1 41.463 164 55 3 147 303 14 143 6.15e-26 102
Msa0609220 AT1G53950.1 41.463 164 55 3 223 379 14 143 6.15e-26 102
Msa0609220 AT1G53950.1 43.038 158 49 3 1 151 20 143 1.13e-25 101
Msa0609220 AT1G11980.1 54.545 77 35 0 1 77 1 77 3.79e-22 89.7
Msa0609220 AT1G11980.1 54.545 77 35 0 77 153 1 77 3.79e-22 89.7
Msa0609220 AT1G11980.1 54.545 77 35 0 153 229 1 77 3.79e-22 89.7
Msa0609220 AT1G11980.1 54.545 77 35 0 229 305 1 77 3.79e-22 89.7
Msa0609220 AT1G11980.1 54.545 77 35 0 305 381 1 77 3.98e-22 89.7
Msa0609220 AT2G46500.3 35.862 145 90 2 7 148 40 184 8.90e-19 87.8
Msa0609220 AT2G46500.3 35.862 145 90 2 159 300 40 184 8.90e-19 87.8
Msa0609220 AT2G46500.3 35.862 145 90 2 235 376 40 184 8.90e-19 87.8
Msa0609220 AT2G46500.1 35.862 145 90 2 7 148 40 184 1.45e-18 87.8
Msa0609220 AT2G46500.1 35.862 145 90 2 159 300 40 184 1.45e-18 87.8
Msa0609220 AT2G46500.1 35.862 145 90 2 235 376 40 184 1.45e-18 87.8
Msa0609220 AT2G46500.2 35.862 145 90 2 7 148 40 184 1.45e-18 87.8
Msa0609220 AT2G46500.2 35.862 145 90 2 159 300 40 184 1.45e-18 87.8
Msa0609220 AT2G46500.2 35.862 145 90 2 235 376 40 184 1.45e-18 87.8
Msa0609220 AT1G53945.1 38.356 146 53 3 1 143 1 112 4.63e-17 77.0
Msa0609220 AT1G53945.1 38.356 146 53 3 77 219 1 112 4.63e-17 77.0
Msa0609220 AT1G53945.1 38.356 146 53 3 153 295 1 112 4.63e-17 77.0
Msa0609220 AT1G53945.1 38.356 146 53 3 229 371 1 112 4.63e-17 77.0
Msa0609220 AT5G24240.1 33.793 145 91 3 7 147 38 181 3.21e-13 71.6
Msa0609220 AT5G24240.1 33.793 145 91 3 83 223 38 181 3.21e-13 71.6
Msa0609220 AT5G24240.1 33.793 145 91 3 159 299 38 181 3.21e-13 71.6
Msa0609220 AT5G24240.1 33.793 145 91 3 235 375 38 181 3.21e-13 71.6
Msa0609220 AT5G24240.2 33.793 145 91 3 7 147 38 181 3.21e-13 71.6
Msa0609220 AT5G24240.2 33.793 145 91 3 83 223 38 181 3.21e-13 71.6
Msa0609220 AT5G24240.2 33.793 145 91 3 159 299 38 181 3.21e-13 71.6
Msa0609220 AT5G24240.2 33.793 145 91 3 235 375 38 181 3.21e-13 71.6

Find 110 sgRNAs with CRISPR-Local

Find 266 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACCATCCTCCAATTGCTTTC+CGG 0.228225 4_2:+56590377 None:intergenic
ACCCTCTTTGTCCTGGATCT+TGG 0.274270 4_2:+56590887 None:intergenic
AATGAAGAGTGGATTCCTTT+TGG 0.288937 4_2:+56590559 None:intergenic
AAAATAAGCCTCTGCTGATC+TGG 0.304914 4_2:+56590174 None:intergenic
ACCCTCTTTGTCCTGAATCT+TGG 0.309404 4_2:+56591115 None:intergenic
CAGCAGAGGCTTATCTTTGC+AGG 0.323151 4_2:-56590852 Msa0609220:CDS
ATATTTGTGAAGACACTTAC+TGG 0.340523 4_2:-56590279 Msa0609220:CDS
CAGCAGAGGCTTATCTTTGC+TGG 0.346608 4_2:-56591080 Msa0609220:CDS
AATGCAAAGTAGATTCCTTC+TGG 0.349783 4_2:+56590331 None:intergenic
TAATGTCAAGGCCAAGATTC+AGG 0.350237 4_2:-56591126 Msa0609220:CDS
AAAGGAATCCACTCTTCATT+TGG 0.350557 4_2:-56590556 Msa0609220:CDS
GAAGGAATCTACTTTGCATT+TGG 0.357379 4_2:-56590328 Msa0609220:CDS
AAGATAAGCCTCTGCTGATC+TGG 0.372442 4_2:+56590630 None:intergenic
CAGCAGAGGCTTATCTTTGC+TGG 0.372605 4_2:-56590624 Msa0609220:CDS
TAATGTCAAGGCTAAAATTC+AGG 0.376104 4_2:-56590442 Msa0609220:CDS
AATGAAGGGTAGATTCCTTC+TGG 0.382623 4_2:+56591015 None:intergenic
TACTGGGAAGACTATTACCT+TGG 0.388796 4_2:-56590262 Msa0609220:CDS
GACGGGAAAGACTATTACTT+TGG 0.390154 4_2:-56590718 Msa0609220:CDS
AATGAAGGGTGGATTCCTTC+TGG 0.393830 4_2:+56590787 None:intergenic
GAAGGAATCCACCCTTCATT+TGG 0.394555 4_2:-56590784 Msa0609220:CDS
AAGATAAGCCTCTGCTGATC+AGG 0.398269 4_2:+56591086 None:intergenic
AAGATAAGCCTCTGCTGATC+AGG 0.404708 4_2:+56590858 None:intergenic
GAAGGAATCTACCCTTCATT+TGG 0.416312 4_2:-56591012 Msa0609220:CDS
TCTGGATGTTATAATCTGCT+AGG 0.432083 4_2:+56591033 None:intergenic
GTGGGATACCCTCTTTGTCC+TGG 0.442832 4_2:+56590880 None:intergenic
AAAATTAGTCTCTGCTGGTC+TGG 0.443739 4_2:+56590402 None:intergenic
TCAATCTAAGCACCAAATGA+AGG 0.460679 4_2:+56590772 None:intergenic
CTTGGCCTTGACATTATCAA+TGG 0.462747 4_2:+56590905 None:intergenic
GCTGGCAAGCAACTTGAAGA+TGG 0.464410 4_2:-56590606 Msa0609220:CDS
AAATAAGCCTCTGCTGATCT+GGG 0.465164 4_2:+56590175 None:intergenic
TCAATCTAAGCACCAAATGA+AGG 0.467207 4_2:+56591000 None:intergenic
CACCCTAGAGGTTGAATCCT+CGG 0.468211 4_2:-56590931 Msa0609220:CDS
GGCTAAAATTCAGGATAAAG+AGG 0.478339 4_2:-56590433 Msa0609220:CDS
CATTTGGTGCTTAGATTGAG+AGG 0.480984 4_2:-56590768 Msa0609220:CDS
CATTTGGTGCTTAGATTGAG+AGG 0.480984 4_2:-56590996 Msa0609220:CDS
ATTGGAGGATGGTCGTACTT+TGG 0.488133 4_2:-56590367 Msa0609220:CDS
ATCTTTGTGAAAACATTGAC+TGG 0.491047 4_2:-56591191 Msa0609220:CDS
AGCAGAGGCTTATCTTTGCT+GGG 0.491816 4_2:-56591079 Msa0609220:CDS
CTGGATGTTATAATCTGCTA+GGG 0.501082 4_2:+56591034 None:intergenic
GGGAAAGACTATTACTTTGG+AGG 0.502909 4_2:-56590715 Msa0609220:CDS
TCTGGATGTTATAATCAGCT+AGG 0.505255 4_2:+56590805 None:intergenic
TGGGAAGACTATTACCTTGG+AGG 0.507917 4_2:-56590259 Msa0609220:CDS
TAAAGCTAAGATTCAAGATA+AGG 0.516683 4_2:-56590664 Msa0609220:CDS
TAATGTCAAGGCCAAGATCC+AGG 0.518614 4_2:-56590898 Msa0609220:CDS
TGCTGATTATAATATCCAAA+AGG 0.520701 4_2:-56590574 Msa0609220:CDS
AAAGACTATTACTTTGGAGG+TGG 0.523715 4_2:-56590712 Msa0609220:CDS
ATATTCGTCAAGACTTTGAC+CGG 0.529492 4_2:-56590963 Msa0609220:CDS
TGATTCCACCTCAAGGGTGA+TGG 0.532738 4_2:+56591163 None:intergenic
GCTGGCAAGCAGTTGGAGGA+TGG 0.535241 4_2:-56590150 Msa0609220:CDS
GCTGGGAAACAGCTTGAGGA+TGG 0.536276 4_2:-56591062 Msa0609220:CDS
GTTGGAGGATGGTCGTACTC+TGG 0.539382 4_2:-56590139 Msa0609220:CDS
TTTGGATATTATAATCAGCA+AGG 0.551320 4_2:+56590577 None:intergenic
GCAGGGAAACAACTAGAAGA+TGG 0.551920 4_2:-56590834 Msa0609220:CDS
TATCCGAGGATTCAACCTCT+AGG 0.556980 4_2:+56590928 None:intergenic
AGCTAAGATTCAAGATAAGG+AGG 0.557195 4_2:-56590661 Msa0609220:CDS
GCCGGAAAGCAATTGGAGGA+TGG 0.558534 4_2:-56590378 Msa0609220:CDS
CATCTTGTTCTTCGTCTCCG+TGG 0.558629 4_2:-56590084 Msa0609220:CDS
AGCAAAGATACAAGATAAGG+AGG 0.559260 4_2:-56590205 Msa0609220:CDS
CTTGTTCTTCGTCTCCGTGG+TGG 0.562924 4_2:-56590081 Msa0609220:CDS
GAAAGCAAAGATACAAGATA+AGG 0.565523 4_2:-56590208 Msa0609220:CDS
CTTTGCTGGGAAACAGCTTG+AGG 0.565867 4_2:-56591066 Msa0609220:CDS
TTGGATATTATAATCAGCAA+GGG 0.567259 4_2:+56590578 None:intergenic
ATCCGAGGATTCAACCTCTA+GGG 0.568186 4_2:+56590929 None:intergenic
GCTAAAATTCAGGATAAAGA+GGG 0.570872 4_2:-56590432 Msa0609220:CDS
ATAAGCCTCTGCTGATCTGG+AGG 0.572008 4_2:+56590633 None:intergenic
AGCAGAGGCTTATCTTTGCA+GGG 0.572317 4_2:-56590851 Msa0609220:CDS
GAAGACTATTACCTTGGAGG+TGG 0.573223 4_2:-56590256 Msa0609220:CDS
GGATTCAACCTCTAGGGTGA+TGG 0.575072 4_2:+56590935 None:intergenic
ATAAGCCTCTGCTGATCAGG+TGG 0.575147 4_2:+56590861 None:intergenic
GACATTATCAATGGTATCCG+AGG 0.576477 4_2:+56590914 None:intergenic
ATAAGCCTCTGCTGATCAGG+AGG 0.578405 4_2:+56591089 None:intergenic
GGAGACGAAGAACAAGATGA+AGG 0.578463 4_2:+56590088 None:intergenic
TATTTGTGAAGACACTTACT+GGG 0.579572 4_2:-56590278 Msa0609220:CDS
GCTAAGATTCAAGATAAGGA+GGG 0.581218 4_2:-56590660 Msa0609220:CDS
ATCAGAGCTTTCCACCTCCA+AGG 0.582807 4_2:+56590245 None:intergenic
CAATCTAAGCACCAAATGAA+GGG 0.584307 4_2:+56591001 None:intergenic
GCAAGCAACTTGAAGATGGA+AGG 0.585193 4_2:-56590602 Msa0609220:CDS
ATTAGTCTCTGCTGGTCTGG+AGG 0.592481 4_2:+56590405 None:intergenic
CAATCTAAGCACCAAATGAA+GGG 0.592660 4_2:+56590773 None:intergenic
TATCTGATGATTCCACCTCA+AGG 0.595447 4_2:+56591156 None:intergenic
CTGGATGTTATAATCAGCTA+GGG 0.596159 4_2:+56590806 None:intergenic
CAAAACCATCACCCTTGAGG+TGG 0.600034 4_2:-56591168 Msa0609220:CDS
ATCTGATGATTCCACCTCAA+GGG 0.601696 4_2:+56591157 None:intergenic
ATAAGCCTCTGCTGATCTGG+GGG 0.604365 4_2:+56590177 None:intergenic
CCGCAAAACCAAATGAAGAG+TGG 0.607687 4_2:+56590548 None:intergenic
GGCCAAGATTCAGGACAAAG+AGG 0.609724 4_2:-56591117 Msa0609220:CDS
AATAAGCCTCTGCTGATCTG+GGG 0.611344 4_2:+56590176 None:intergenic
GGCCAAGATCCAGGACAAAG+AGG 0.613915 4_2:-56590889 Msa0609220:CDS
TGATACAATTGATAATGTCA+AGG 0.616929 4_2:-56590454 Msa0609220:CDS
GCCAAGATCCAGGACAAAGA+GGG 0.620887 4_2:-56590888 Msa0609220:CDS
GCCAAGATTCAGGACAAAGA+GGG 0.620887 4_2:-56591116 Msa0609220:CDS
GCAAAGATACAAGATAAGGA+GGG 0.621833 4_2:-56590204 Msa0609220:CDS
GGAAACAACTAGAAGATGGA+AGG 0.625020 4_2:-56590830 Msa0609220:CDS
GGCTGATTATAATATCCAGA+AGG 0.627715 4_2:-56590346 Msa0609220:CDS
TTGGTGCTTAGATTGAGAGG+TGG 0.628688 4_2:-56590765 Msa0609220:CDS
TTGGTGCTTAGATTGAGAGG+TGG 0.628688 4_2:-56590993 Msa0609220:CDS
GGATACCATTGATAATGTCA+AGG 0.634466 4_2:-56590910 Msa0609220:CDS
TAAGCCTCTGCTGATCTGGA+GGG 0.637169 4_2:+56590634 None:intergenic
AGATACAATTGATAATGTCA+AGG 0.641099 4_2:-56591138 Msa0609220:CDS
GAGACGAAGAACAAGATGAA+GGG 0.641854 4_2:+56590089 None:intergenic
TGGCAAAACCATCACCCTTG+AGG 0.648872 4_2:-56591171 Msa0609220:CDS
TCTAAGCACCAAATGAAGGG+TGG 0.651428 4_2:+56590776 None:intergenic
GTATCCCTCCTGATCAGCAG+AGG 0.654458 4_2:-56591094 Msa0609220:CDS
AGCAGATTATAACATCCAGA+AGG 0.655688 4_2:-56591030 Msa0609220:CDS
TAAGCCTCTGCTGATCAGGA+GGG 0.663439 4_2:+56591090 None:intergenic
GTATCCCTCCAGATCAGCAG+AGG 0.664066 4_2:-56590638 Msa0609220:CDS
GTATCCCACCTGATCAGCAG+AGG 0.664066 4_2:-56590866 Msa0609220:CDS
TAAGCCTCTGCTGATCAGGT+GGG 0.669417 4_2:+56590862 None:intergenic
AGCTGATTATAACATCCAGA+AGG 0.677696 4_2:-56590802 Msa0609220:CDS
AACACGCTTAGAAGCCACCA+CGG 0.699059 4_2:+56590067 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AGATACAATTGATAATGTCA+AGG - chr4_2:56590133-56590152 Msa0609220:CDS 25.0%
! TAAAGCTAAGATTCAAGATA+AGG - chr4_2:56590607-56590626 Msa0609220:CDS 25.0%
! TTGGATATTATAATCAGCAA+GGG + chr4_2:56590696-56590715 None:intergenic 25.0%
! TTTGGATATTATAATCAGCA+AGG + chr4_2:56590697-56590716 None:intergenic 25.0%
!! TGCTGATTATAATATCCAAA+AGG - chr4_2:56590697-56590716 Msa0609220:CDS 25.0%
!!! TGATACAATTGATAATGTCA+AGG - chr4_2:56590817-56590836 Msa0609220:CDS 25.0%
!!! AGATACAATTGATAATGTCA+AGG - chr4_2:56590133-56590152 Msa0609220:CDS 25.0%
! TAAAGCTAAGATTCAAGATA+AGG - chr4_2:56590607-56590626 Msa0609220:CDS 25.0%
! TTGGATATTATAATCAGCAA+GGG + chr4_2:56590696-56590715 None:intergenic 25.0%
! TTTGGATATTATAATCAGCA+AGG + chr4_2:56590697-56590716 None:intergenic 25.0%
!! TGCTGATTATAATATCCAAA+AGG - chr4_2:56590697-56590716 Msa0609220:CDS 25.0%
!!! TGATACAATTGATAATGTCA+AGG - chr4_2:56590817-56590836 Msa0609220:CDS 25.0%
ATCTTTGTGAAAACATTGAC+TGG - chr4_2:56590080-56590099 Msa0609220:CDS 30.0%
! GATTTTTGTGAAGACTTTGA+CGG - chr4_2:56590535-56590554 Msa0609220:CDS 30.0%
! ATTTTTGTGAAGACTTTGAC+GGG - chr4_2:56590536-56590555 Msa0609220:CDS 30.0%
! AGTAATAGTTTTTCCGGTAA+GGG + chr4_2:56590780-56590799 None:intergenic 30.0%
! AAGTAATAGTTTTTCCGGTA+AGG + chr4_2:56590781-56590800 None:intergenic 30.0%
TACCGGAAAAACTATTACTT+TGG - chr4_2:56590781-56590800 Msa0609220:CDS 30.0%
! CTCCAAAGTAATAGTTTTTC+CGG + chr4_2:56590786-56590805 None:intergenic 30.0%
TAATGTCAAGGCTAAAATTC+AGG - chr4_2:56590829-56590848 Msa0609220:CDS 30.0%
GCTAAAATTCAGGATAAAGA+GGG - chr4_2:56590839-56590858 Msa0609220:CDS 30.0%
ATATTTGTGAAGACACTTAC+TGG - chr4_2:56590992-56591011 Msa0609220:CDS 30.0%
TATTTGTGAAGACACTTACT+GGG - chr4_2:56590993-56591012 Msa0609220:CDS 30.0%
GAAAGCAAAGATACAAGATA+AGG - chr4_2:56591063-56591082 Msa0609220:CDS 30.0%
ATCTTTGTGAAAACATTGAC+TGG - chr4_2:56590080-56590099 Msa0609220:CDS 30.0%
! GATTTTTGTGAAGACTTTGA+CGG - chr4_2:56590535-56590554 Msa0609220:CDS 30.0%
! ATTTTTGTGAAGACTTTGAC+GGG - chr4_2:56590536-56590555 Msa0609220:CDS 30.0%
! AGTAATAGTTTTTCCGGTAA+GGG + chr4_2:56590780-56590799 None:intergenic 30.0%
! AAGTAATAGTTTTTCCGGTA+AGG + chr4_2:56590781-56590800 None:intergenic 30.0%
TACCGGAAAAACTATTACTT+TGG - chr4_2:56590781-56590800 Msa0609220:CDS 30.0%
! CTCCAAAGTAATAGTTTTTC+CGG + chr4_2:56590786-56590805 None:intergenic 30.0%
TAATGTCAAGGCTAAAATTC+AGG - chr4_2:56590829-56590848 Msa0609220:CDS 30.0%
GCTAAAATTCAGGATAAAGA+GGG - chr4_2:56590839-56590858 Msa0609220:CDS 30.0%
ATATTTGTGAAGACACTTAC+TGG - chr4_2:56590992-56591011 Msa0609220:CDS 30.0%
TATTTGTGAAGACACTTACT+GGG - chr4_2:56590993-56591012 Msa0609220:CDS 30.0%
GAAAGCAAAGATACAAGATA+AGG - chr4_2:56591063-56591082 Msa0609220:CDS 30.0%
CTGGATGTTATAATCTGCTA+GGG + chr4_2:56590240-56590259 None:intergenic 35.0%
TCTGGATGTTATAATCTGCT+AGG + chr4_2:56590241-56590260 None:intergenic 35.0%
AGCAGATTATAACATCCAGA+AGG - chr4_2:56590241-56590260 Msa0609220:CDS 35.0%
CAATCTAAGCACCAAATGAA+GGG + chr4_2:56590273-56590292 None:intergenic 35.0%
TCAATCTAAGCACCAAATGA+AGG + chr4_2:56590274-56590293 None:intergenic 35.0%
ATATTCGTCAAGACTTTGAC+CGG - chr4_2:56590308-56590327 Msa0609220:CDS 35.0%
!! GGATACCATTGATAATGTCA+AGG - chr4_2:56590361-56590380 Msa0609220:CDS 35.0%
CTGGATGTTATAATCAGCTA+GGG + chr4_2:56590468-56590487 None:intergenic 35.0%
TCTGGATGTTATAATCAGCT+AGG + chr4_2:56590469-56590488 None:intergenic 35.0%
AGCTGATTATAACATCCAGA+AGG - chr4_2:56590469-56590488 Msa0609220:CDS 35.0%
CAATCTAAGCACCAAATGAA+GGG + chr4_2:56590273-56590292 None:intergenic 35.0%
TCAATCTAAGCACCAAATGA+AGG + chr4_2:56590274-56590293 None:intergenic 35.0%
! AAAGACTATTACTTTGGAGG+TGG - chr4_2:56590559-56590578 Msa0609220:CDS 35.0%
AGCTAAGATTCAAGATAAGG+AGG - chr4_2:56590610-56590629 Msa0609220:CDS 35.0%
GCTAAGATTCAAGATAAGGA+GGG - chr4_2:56590611-56590630 Msa0609220:CDS 35.0%
!! AATGAAGAGTGGATTCCTTT+TGG + chr4_2:56590715-56590734 None:intergenic 35.0%
AAAGGAATCCACTCTTCATT+TGG - chr4_2:56590715-56590734 Msa0609220:CDS 35.0%
! ATTTTTGTGAAGACCCTTAC+CGG - chr4_2:56590764-56590783 Msa0609220:CDS 35.0%
CGGAAAAACTATTACTTTGG+AGG - chr4_2:56590784-56590803 Msa0609220:CDS 35.0%
GGCTAAAATTCAGGATAAAG+AGG - chr4_2:56590838-56590857 Msa0609220:CDS 35.0%
! AATTTTTGCCGGAAAGCAAT+TGG - chr4_2:56590886-56590905 Msa0609220:CDS 35.0%
GGCTGATTATAATATCCAGA+AGG - chr4_2:56590925-56590944 Msa0609220:CDS 35.0%
AATGCAAAGTAGATTCCTTC+TGG + chr4_2:56590943-56590962 None:intergenic 35.0%
GAAGGAATCTACTTTGCATT+TGG - chr4_2:56590943-56590962 Msa0609220:CDS 35.0%
!!! CTACTTTGCATTTGGTTTTG+AGG - chr4_2:56590951-56590970 Msa0609220:CDS 35.0%
AGCAAAGATACAAGATAAGG+AGG - chr4_2:56591066-56591085 Msa0609220:CDS 35.0%
GCAAAGATACAAGATAAGGA+GGG - chr4_2:56591067-56591086 Msa0609220:CDS 35.0%
CTGGATGTTATAATCTGCTA+GGG + chr4_2:56590240-56590259 None:intergenic 35.0%
TCTGGATGTTATAATCTGCT+AGG + chr4_2:56590241-56590260 None:intergenic 35.0%
AGCAGATTATAACATCCAGA+AGG - chr4_2:56590241-56590260 Msa0609220:CDS 35.0%
CAATCTAAGCACCAAATGAA+GGG + chr4_2:56590273-56590292 None:intergenic 35.0%
TCAATCTAAGCACCAAATGA+AGG + chr4_2:56590274-56590293 None:intergenic 35.0%
ATATTCGTCAAGACTTTGAC+CGG - chr4_2:56590308-56590327 Msa0609220:CDS 35.0%
!! GGATACCATTGATAATGTCA+AGG - chr4_2:56590361-56590380 Msa0609220:CDS 35.0%
CTGGATGTTATAATCAGCTA+GGG + chr4_2:56590468-56590487 None:intergenic 35.0%
TCTGGATGTTATAATCAGCT+AGG + chr4_2:56590469-56590488 None:intergenic 35.0%
AGCTGATTATAACATCCAGA+AGG - chr4_2:56590469-56590488 Msa0609220:CDS 35.0%
CAATCTAAGCACCAAATGAA+GGG + chr4_2:56590273-56590292 None:intergenic 35.0%
TCAATCTAAGCACCAAATGA+AGG + chr4_2:56590274-56590293 None:intergenic 35.0%
! AAAGACTATTACTTTGGAGG+TGG - chr4_2:56590559-56590578 Msa0609220:CDS 35.0%
AGCTAAGATTCAAGATAAGG+AGG - chr4_2:56590610-56590629 Msa0609220:CDS 35.0%
GCTAAGATTCAAGATAAGGA+GGG - chr4_2:56590611-56590630 Msa0609220:CDS 35.0%
!! AATGAAGAGTGGATTCCTTT+TGG + chr4_2:56590715-56590734 None:intergenic 35.0%
AAAGGAATCCACTCTTCATT+TGG - chr4_2:56590715-56590734 Msa0609220:CDS 35.0%
! ATTTTTGTGAAGACCCTTAC+CGG - chr4_2:56590764-56590783 Msa0609220:CDS 35.0%
CGGAAAAACTATTACTTTGG+AGG - chr4_2:56590784-56590803 Msa0609220:CDS 35.0%
GGCTAAAATTCAGGATAAAG+AGG - chr4_2:56590838-56590857 Msa0609220:CDS 35.0%
! AATTTTTGCCGGAAAGCAAT+TGG - chr4_2:56590886-56590905 Msa0609220:CDS 35.0%
GGCTGATTATAATATCCAGA+AGG - chr4_2:56590925-56590944 Msa0609220:CDS 35.0%
AATGCAAAGTAGATTCCTTC+TGG + chr4_2:56590943-56590962 None:intergenic 35.0%
GAAGGAATCTACTTTGCATT+TGG - chr4_2:56590943-56590962 Msa0609220:CDS 35.0%
!!! CTACTTTGCATTTGGTTTTG+AGG - chr4_2:56590951-56590970 Msa0609220:CDS 35.0%
AGCAAAGATACAAGATAAGG+AGG - chr4_2:56591066-56591085 Msa0609220:CDS 35.0%
GCAAAGATACAAGATAAGGA+GGG - chr4_2:56591067-56591086 Msa0609220:CDS 35.0%
ATCTGATGATTCCACCTCAA+GGG + chr4_2:56590117-56590136 None:intergenic 40.0%
TATCTGATGATTCCACCTCA+AGG + chr4_2:56590118-56590137 None:intergenic 40.0%
TAATGTCAAGGCCAAGATTC+AGG - chr4_2:56590145-56590164 Msa0609220:CDS 40.0%
AATGAAGGGTAGATTCCTTC+TGG + chr4_2:56590259-56590278 None:intergenic 40.0%
GAAGGAATCTACCCTTCATT+TGG - chr4_2:56590259-56590278 Msa0609220:CDS 40.0%
!! CATTTGGTGCTTAGATTGAG+AGG - chr4_2:56590275-56590294 Msa0609220:CDS 40.0%
GACATTATCAATGGTATCCG+AGG + chr4_2:56590360-56590379 None:intergenic 40.0%
!! CTTGGCCTTGACATTATCAA+TGG + chr4_2:56590141-56590160 None:intergenic 40.0%
GGAAACAACTAGAAGATGGA+AGG - chr4_2:56590441-56590460 Msa0609220:CDS 40.0%
!! CATTTGGTGCTTAGATTGAG+AGG - chr4_2:56590275-56590294 Msa0609220:CDS 40.0%
GACGGGAAAGACTATTACTT+TGG - chr4_2:56590553-56590572 Msa0609220:CDS 40.0%
GGGAAAGACTATTACTTTGG+AGG - chr4_2:56590556-56590575 Msa0609220:CDS 40.0%
!!! CCACTCTTCATTTGGTTTTG+CGG - chr4_2:56590723-56590742 Msa0609220:CDS 40.0%
! AAAATTAGTCTCTGCTGGTC+TGG + chr4_2:56590872-56590891 None:intergenic 40.0%
! CAGCAGAGACTAATTTTTGC+CGG - chr4_2:56590875-56590894 Msa0609220:CDS 40.0%
TACTGGGAAGACTATTACCT+TGG - chr4_2:56591009-56591028 Msa0609220:CDS 40.0%
AAATAAGCCTCTGCTGATCT+GGG + chr4_2:56591099-56591118 None:intergenic 40.0%
AAAATAAGCCTCTGCTGATC+TGG + chr4_2:56591100-56591119 None:intergenic 40.0%
!! TATTTTTGCTGGCAAGCAGT+TGG - chr4_2:56591114-56591133 Msa0609220:CDS 40.0%
GAGACGAAGAACAAGATGAA+GGG + chr4_2:56591185-56591204 None:intergenic 40.0%
ATCTGATGATTCCACCTCAA+GGG + chr4_2:56590117-56590136 None:intergenic 40.0%
TATCTGATGATTCCACCTCA+AGG + chr4_2:56590118-56590137 None:intergenic 40.0%
TAATGTCAAGGCCAAGATTC+AGG - chr4_2:56590145-56590164 Msa0609220:CDS 40.0%
AATGAAGGGTAGATTCCTTC+TGG + chr4_2:56590259-56590278 None:intergenic 40.0%
GAAGGAATCTACCCTTCATT+TGG - chr4_2:56590259-56590278 Msa0609220:CDS 40.0%
!! CATTTGGTGCTTAGATTGAG+AGG - chr4_2:56590275-56590294 Msa0609220:CDS 40.0%
GACATTATCAATGGTATCCG+AGG + chr4_2:56590360-56590379 None:intergenic 40.0%
!! CTTGGCCTTGACATTATCAA+TGG + chr4_2:56590141-56590160 None:intergenic 40.0%
GGAAACAACTAGAAGATGGA+AGG - chr4_2:56590441-56590460 Msa0609220:CDS 40.0%
!! CATTTGGTGCTTAGATTGAG+AGG - chr4_2:56590275-56590294 Msa0609220:CDS 40.0%
GACGGGAAAGACTATTACTT+TGG - chr4_2:56590553-56590572 Msa0609220:CDS 40.0%
GGGAAAGACTATTACTTTGG+AGG - chr4_2:56590556-56590575 Msa0609220:CDS 40.0%
!!! CCACTCTTCATTTGGTTTTG+CGG - chr4_2:56590723-56590742 Msa0609220:CDS 40.0%
! AAAATTAGTCTCTGCTGGTC+TGG + chr4_2:56590872-56590891 None:intergenic 40.0%
! CAGCAGAGACTAATTTTTGC+CGG - chr4_2:56590875-56590894 Msa0609220:CDS 40.0%
TACTGGGAAGACTATTACCT+TGG - chr4_2:56591009-56591028 Msa0609220:CDS 40.0%
AAATAAGCCTCTGCTGATCT+GGG + chr4_2:56591099-56591118 None:intergenic 40.0%
AAAATAAGCCTCTGCTGATC+TGG + chr4_2:56591100-56591119 None:intergenic 40.0%
!! TATTTTTGCTGGCAAGCAGT+TGG - chr4_2:56591114-56591133 Msa0609220:CDS 40.0%
GAGACGAAGAACAAGATGAA+GGG + chr4_2:56591185-56591204 None:intergenic 40.0%
GCCAAGATTCAGGACAAAGA+GGG - chr4_2:56590155-56590174 Msa0609220:CDS 45.0%
ACCCTCTTTGTCCTGAATCT+TGG + chr4_2:56590159-56590178 None:intergenic 45.0%
AAGATAAGCCTCTGCTGATC+AGG + chr4_2:56590188-56590207 None:intergenic 45.0%
AGCAGAGGCTTATCTTTGCT+GGG - chr4_2:56590192-56590211 Msa0609220:CDS 45.0%
! TTGGTGCTTAGATTGAGAGG+TGG - chr4_2:56590278-56590297 Msa0609220:CDS 45.0%
!!! CTCTAGGGTGATGGTTTTTC+CGG + chr4_2:56590330-56590349 None:intergenic 45.0%
ATCCGAGGATTCAACCTCTA+GGG + chr4_2:56590345-56590364 None:intergenic 45.0%
TATCCGAGGATTCAACCTCT+AGG + chr4_2:56590346-56590365 None:intergenic 45.0%
TAATGTCAAGGCCAAGATCC+AGG - chr4_2:56590373-56590392 Msa0609220:CDS 45.0%
AAGATAAGCCTCTGCTGATC+AGG + chr4_2:56590188-56590207 None:intergenic 45.0%
AGCAGAGGCTTATCTTTGCA+GGG - chr4_2:56590420-56590439 Msa0609220:CDS 45.0%
GCAGGGAAACAACTAGAAGA+TGG - chr4_2:56590437-56590456 Msa0609220:CDS 45.0%
! AATGAAGGGTGGATTCCTTC+TGG + chr4_2:56590487-56590506 None:intergenic 45.0%
GAAGGAATCCACCCTTCATT+TGG - chr4_2:56590487-56590506 Msa0609220:CDS 45.0%
TCTAAGCACCAAATGAAGGG+TGG + chr4_2:56590270-56590289 None:intergenic 45.0%
! TTGGTGCTTAGATTGAGAGG+TGG - chr4_2:56590278-56590297 Msa0609220:CDS 45.0%
AAGATAAGCCTCTGCTGATC+TGG + chr4_2:56590188-56590207 None:intergenic 45.0%
GCAAGCAACTTGAAGATGGA+AGG - chr4_2:56590669-56590688 Msa0609220:CDS 45.0%
CCGCAAAACCAAATGAAGAG+TGG + chr4_2:56590726-56590745 None:intergenic 45.0%
! CGGCAAAAATTAGTCTCTGC+TGG + chr4_2:56590877-56590896 None:intergenic 45.0%
! TTTTGCCGGAAAGCAATTGG+AGG - chr4_2:56590889-56590908 Msa0609220:CDS 45.0%
ACCATCCTCCAATTGCTTTC+CGG + chr4_2:56590897-56590916 None:intergenic 45.0%
ATTGGAGGATGGTCGTACTT+TGG - chr4_2:56590904-56590923 Msa0609220:CDS 45.0%
!!! CATTTGGTTTTGAGGCTTCG+TGG - chr4_2:56590959-56590978 Msa0609220:CDS 45.0%
TGGGAAGACTATTACCTTGG+AGG - chr4_2:56591012-56591031 Msa0609220:CDS 45.0%
GAAGACTATTACCTTGGAGG+TGG - chr4_2:56591015-56591034 Msa0609220:CDS 45.0%
AATAAGCCTCTGCTGATCTG+GGG + chr4_2:56591098-56591117 None:intergenic 45.0%
!!! CAGCAGAGGCTTATTTTTGC+TGG - chr4_2:56591103-56591122 Msa0609220:CDS 45.0%
GGAGACGAAGAACAAGATGA+AGG + chr4_2:56591186-56591205 None:intergenic 45.0%
GCCAAGATTCAGGACAAAGA+GGG - chr4_2:56590155-56590174 Msa0609220:CDS 45.0%
ACCCTCTTTGTCCTGAATCT+TGG + chr4_2:56590159-56590178 None:intergenic 45.0%
AAGATAAGCCTCTGCTGATC+AGG + chr4_2:56590188-56590207 None:intergenic 45.0%
AGCAGAGGCTTATCTTTGCT+GGG - chr4_2:56590192-56590211 Msa0609220:CDS 45.0%
! TTGGTGCTTAGATTGAGAGG+TGG - chr4_2:56590278-56590297 Msa0609220:CDS 45.0%
!!! CTCTAGGGTGATGGTTTTTC+CGG + chr4_2:56590330-56590349 None:intergenic 45.0%
ATCCGAGGATTCAACCTCTA+GGG + chr4_2:56590345-56590364 None:intergenic 45.0%
TATCCGAGGATTCAACCTCT+AGG + chr4_2:56590346-56590365 None:intergenic 45.0%
TAATGTCAAGGCCAAGATCC+AGG - chr4_2:56590373-56590392 Msa0609220:CDS 45.0%
AAGATAAGCCTCTGCTGATC+AGG + chr4_2:56590188-56590207 None:intergenic 45.0%
AGCAGAGGCTTATCTTTGCA+GGG - chr4_2:56590420-56590439 Msa0609220:CDS 45.0%
GCAGGGAAACAACTAGAAGA+TGG - chr4_2:56590437-56590456 Msa0609220:CDS 45.0%
! AATGAAGGGTGGATTCCTTC+TGG + chr4_2:56590487-56590506 None:intergenic 45.0%
GAAGGAATCCACCCTTCATT+TGG - chr4_2:56590487-56590506 Msa0609220:CDS 45.0%
TCTAAGCACCAAATGAAGGG+TGG + chr4_2:56590270-56590289 None:intergenic 45.0%
! TTGGTGCTTAGATTGAGAGG+TGG - chr4_2:56590278-56590297 Msa0609220:CDS 45.0%
AAGATAAGCCTCTGCTGATC+TGG + chr4_2:56590188-56590207 None:intergenic 45.0%
GCAAGCAACTTGAAGATGGA+AGG - chr4_2:56590669-56590688 Msa0609220:CDS 45.0%
CCGCAAAACCAAATGAAGAG+TGG + chr4_2:56590726-56590745 None:intergenic 45.0%
! CGGCAAAAATTAGTCTCTGC+TGG + chr4_2:56590877-56590896 None:intergenic 45.0%
! TTTTGCCGGAAAGCAATTGG+AGG - chr4_2:56590889-56590908 Msa0609220:CDS 45.0%
ACCATCCTCCAATTGCTTTC+CGG + chr4_2:56590897-56590916 None:intergenic 45.0%
ATTGGAGGATGGTCGTACTT+TGG - chr4_2:56590904-56590923 Msa0609220:CDS 45.0%
!!! CATTTGGTTTTGAGGCTTCG+TGG - chr4_2:56590959-56590978 Msa0609220:CDS 45.0%
TGGGAAGACTATTACCTTGG+AGG - chr4_2:56591012-56591031 Msa0609220:CDS 45.0%
GAAGACTATTACCTTGGAGG+TGG - chr4_2:56591015-56591034 Msa0609220:CDS 45.0%
AATAAGCCTCTGCTGATCTG+GGG + chr4_2:56591098-56591117 None:intergenic 45.0%
!!! CAGCAGAGGCTTATTTTTGC+TGG - chr4_2:56591103-56591122 Msa0609220:CDS 45.0%
GGAGACGAAGAACAAGATGA+AGG + chr4_2:56591186-56591205 None:intergenic 45.0%
TGGCAAAACCATCACCCTTG+AGG - chr4_2:56590100-56590119 Msa0609220:CDS 50.0%
CAAAACCATCACCCTTGAGG+TGG - chr4_2:56590103-56590122 Msa0609220:CDS 50.0%
TGATTCCACCTCAAGGGTGA+TGG + chr4_2:56590111-56590130 None:intergenic 50.0%
GGCCAAGATTCAGGACAAAG+AGG - chr4_2:56590154-56590173 Msa0609220:CDS 50.0%
TAAGCCTCTGCTGATCAGGA+GGG + chr4_2:56590184-56590203 None:intergenic 50.0%
ATAAGCCTCTGCTGATCAGG+AGG + chr4_2:56590185-56590204 None:intergenic 50.0%
CAGCAGAGGCTTATCTTTGC+TGG - chr4_2:56590191-56590210 Msa0609220:CDS 50.0%
CTTTGCTGGGAAACAGCTTG+AGG - chr4_2:56590205-56590224 Msa0609220:CDS 50.0%
CGGAAAAACCATCACCCTAG+AGG - chr4_2:56590328-56590347 Msa0609220:CDS 50.0%
!! GGATTCAACCTCTAGGGTGA+TGG + chr4_2:56590339-56590358 None:intergenic 50.0%
CACCCTAGAGGTTGAATCCT+CGG - chr4_2:56590340-56590359 Msa0609220:CDS 50.0%
GCCAAGATCCAGGACAAAGA+GGG - chr4_2:56590383-56590402 Msa0609220:CDS 50.0%
ACCCTCTTTGTCCTGGATCT+TGG + chr4_2:56590387-56590406 None:intergenic 50.0%
TAAGCCTCTGCTGATCAGGT+GGG + chr4_2:56590412-56590431 None:intergenic 50.0%
ATAAGCCTCTGCTGATCAGG+TGG + chr4_2:56590185-56590204 None:intergenic 50.0%
CAGCAGAGGCTTATCTTTGC+AGG - chr4_2:56590191-56590210 Msa0609220:CDS 50.0%
TAAGCCTCTGCTGATCTGGA+GGG + chr4_2:56590640-56590659 None:intergenic 50.0%
ATAAGCCTCTGCTGATCTGG+AGG + chr4_2:56590641-56590660 None:intergenic 50.0%
CAGCAGAGGCTTATCTTTGC+TGG - chr4_2:56590191-56590210 Msa0609220:CDS 50.0%
GCTGGCAAGCAACTTGAAGA+TGG - chr4_2:56590665-56590684 Msa0609220:CDS 50.0%
!!! CATTTGGTTTTGCGGCTTCG+TGG - chr4_2:56590731-56590750 Msa0609220:CDS 50.0%
! ATTAGTCTCTGCTGGTCTGG+AGG + chr4_2:56590869-56590888 None:intergenic 50.0%
!!! TTGGTTTTGAGGCTTCGTGG+TGG - chr4_2:56590962-56590981 Msa0609220:CDS 50.0%
ATCAGAGCTTTCCACCTCCA+AGG + chr4_2:56591029-56591048 None:intergenic 50.0%
ATAAGCCTCTGCTGATCTGG+GGG + chr4_2:56590641-56590660 None:intergenic 50.0%
! TTTTGCTGGCAAGCAGTTGG+AGG - chr4_2:56591117-56591136 Msa0609220:CDS 50.0%
CATCTTGTTCTTCGTCTCCG+TGG - chr4_2:56591187-56591206 Msa0609220:CDS 50.0%
TGGCAAAACCATCACCCTTG+AGG - chr4_2:56590100-56590119 Msa0609220:CDS 50.0%
CAAAACCATCACCCTTGAGG+TGG - chr4_2:56590103-56590122 Msa0609220:CDS 50.0%
TGATTCCACCTCAAGGGTGA+TGG + chr4_2:56590111-56590130 None:intergenic 50.0%
GGCCAAGATTCAGGACAAAG+AGG - chr4_2:56590154-56590173 Msa0609220:CDS 50.0%
TAAGCCTCTGCTGATCAGGA+GGG + chr4_2:56590184-56590203 None:intergenic 50.0%
ATAAGCCTCTGCTGATCAGG+AGG + chr4_2:56590185-56590204 None:intergenic 50.0%
CAGCAGAGGCTTATCTTTGC+TGG - chr4_2:56590191-56590210 Msa0609220:CDS 50.0%
CTTTGCTGGGAAACAGCTTG+AGG - chr4_2:56590205-56590224 Msa0609220:CDS 50.0%
CGGAAAAACCATCACCCTAG+AGG - chr4_2:56590328-56590347 Msa0609220:CDS 50.0%
!! GGATTCAACCTCTAGGGTGA+TGG + chr4_2:56590339-56590358 None:intergenic 50.0%
CACCCTAGAGGTTGAATCCT+CGG - chr4_2:56590340-56590359 Msa0609220:CDS 50.0%
GCCAAGATCCAGGACAAAGA+GGG - chr4_2:56590383-56590402 Msa0609220:CDS 50.0%
ACCCTCTTTGTCCTGGATCT+TGG + chr4_2:56590387-56590406 None:intergenic 50.0%
TAAGCCTCTGCTGATCAGGT+GGG + chr4_2:56590412-56590431 None:intergenic 50.0%
ATAAGCCTCTGCTGATCAGG+TGG + chr4_2:56590185-56590204 None:intergenic 50.0%
CAGCAGAGGCTTATCTTTGC+AGG - chr4_2:56590191-56590210 Msa0609220:CDS 50.0%
TAAGCCTCTGCTGATCTGGA+GGG + chr4_2:56590640-56590659 None:intergenic 50.0%
ATAAGCCTCTGCTGATCTGG+AGG + chr4_2:56590641-56590660 None:intergenic 50.0%
CAGCAGAGGCTTATCTTTGC+TGG - chr4_2:56590191-56590210 Msa0609220:CDS 50.0%
GCTGGCAAGCAACTTGAAGA+TGG - chr4_2:56590665-56590684 Msa0609220:CDS 50.0%
!!! CATTTGGTTTTGCGGCTTCG+TGG - chr4_2:56590731-56590750 Msa0609220:CDS 50.0%
! ATTAGTCTCTGCTGGTCTGG+AGG + chr4_2:56590869-56590888 None:intergenic 50.0%
!!! TTGGTTTTGAGGCTTCGTGG+TGG - chr4_2:56590962-56590981 Msa0609220:CDS 50.0%
ATCAGAGCTTTCCACCTCCA+AGG + chr4_2:56591029-56591048 None:intergenic 50.0%
ATAAGCCTCTGCTGATCTGG+GGG + chr4_2:56590641-56590660 None:intergenic 50.0%
! TTTTGCTGGCAAGCAGTTGG+AGG - chr4_2:56591117-56591136 Msa0609220:CDS 50.0%
CATCTTGTTCTTCGTCTCCG+TGG - chr4_2:56591187-56591206 Msa0609220:CDS 50.0%
GTATCCCTCCTGATCAGCAG+AGG - chr4_2:56590177-56590196 Msa0609220:CDS 55.0%
GCTGGGAAACAGCTTGAGGA+TGG - chr4_2:56590209-56590228 Msa0609220:CDS 55.0%
GGCCAAGATCCAGGACAAAG+AGG - chr4_2:56590382-56590401 Msa0609220:CDS 55.0%
GTGGGATACCCTCTTTGTCC+TGG + chr4_2:56590394-56590413 None:intergenic 55.0%
GTATCCCACCTGATCAGCAG+AGG - chr4_2:56590405-56590424 Msa0609220:CDS 55.0%
GTATCCCTCCAGATCAGCAG+AGG - chr4_2:56590633-56590652 Msa0609220:CDS 55.0%
!!! TTGGTTTTGCGGCTTCGTGG+TGG - chr4_2:56590734-56590753 Msa0609220:CDS 55.0%
GCCGGAAAGCAATTGGAGGA+TGG - chr4_2:56590893-56590912 Msa0609220:CDS 55.0%
GTATTCCCCCAGATCAGCAG+AGG - chr4_2:56591089-56591108 Msa0609220:CDS 55.0%
GTTGGAGGATGGTCGTACTC+TGG - chr4_2:56591132-56591151 Msa0609220:CDS 55.0%
CTTGTTCTTCGTCTCCGTGG+TGG - chr4_2:56591190-56591209 Msa0609220:CDS 55.0%
GTATCCCTCCTGATCAGCAG+AGG - chr4_2:56590177-56590196 Msa0609220:CDS 55.0%
GCTGGGAAACAGCTTGAGGA+TGG - chr4_2:56590209-56590228 Msa0609220:CDS 55.0%
GGCCAAGATCCAGGACAAAG+AGG - chr4_2:56590382-56590401 Msa0609220:CDS 55.0%
GTGGGATACCCTCTTTGTCC+TGG + chr4_2:56590394-56590413 None:intergenic 55.0%
GTATCCCACCTGATCAGCAG+AGG - chr4_2:56590405-56590424 Msa0609220:CDS 55.0%
GTATCCCTCCAGATCAGCAG+AGG - chr4_2:56590633-56590652 Msa0609220:CDS 55.0%
!!! TTGGTTTTGCGGCTTCGTGG+TGG - chr4_2:56590734-56590753 Msa0609220:CDS 55.0%
GCCGGAAAGCAATTGGAGGA+TGG - chr4_2:56590893-56590912 Msa0609220:CDS 55.0%
GTATTCCCCCAGATCAGCAG+AGG - chr4_2:56591089-56591108 Msa0609220:CDS 55.0%
GTTGGAGGATGGTCGTACTC+TGG - chr4_2:56591132-56591151 Msa0609220:CDS 55.0%
CTTGTTCTTCGTCTCCGTGG+TGG - chr4_2:56591190-56591209 Msa0609220:CDS 55.0%
GCTGGCAAGCAGTTGGAGGA+TGG - chr4_2:56591121-56591140 Msa0609220:CDS 60.0%
GCTGGCAAGCAGTTGGAGGA+TGG - chr4_2:56591121-56591140 Msa0609220:CDS 60.0%
Chromosome Type Strat End Strand Name
chr4_2 gene 56590074 56591219 56590074 ID=Msa0609220;Name=Msa0609220
chr4_2 mRNA 56590074 56591219 56590074 ID=Msa0609220-mRNA-1;Parent=Msa0609220;Name=Msa0609220-mRNA-1;_AED=0.00;_eAED=0.00;_QI=0|-1|0|1|-1|1|1|0|381
chr4_2 exon 56590074 56591219 56590074 ID=Msa0609220-mRNA-1:exon:14625;Parent=Msa0609220-mRNA-1
chr4_2 CDS 56590074 56591219 56590074 ID=Msa0609220-mRNA-1:cds;Parent=Msa0609220-mRNA-1
Gene Sequence

>Msa0609220

ATGCAAATCTTTGTGAAAACATTGACTGGCAAAACCATCACCCTTGAGGTGGAATCATCAGATACAATTGATAATGTCAAGGCCAAGATTCAGGACAAAGAGGGTATCCCTCCTGATCAGCAGAGGCTTATCTTTGCTGGGAAACAGCTTGAGGATGGAAGAACCCTAGCAGATTATAACATCCAGAAGGAATCTACCCTTCATTTGGTGCTTAGATTGAGAGGTGGAATGCAGATATTCGTCAAGACTTTGACCGGAAAAACCATCACCCTAGAGGTTGAATCCTCGGATACCATTGATAATGTCAAGGCCAAGATCCAGGACAAAGAGGGTATCCCACCTGATCAGCAGAGGCTTATCTTTGCAGGGAAACAACTAGAAGATGGAAGGACCCTAGCTGATTATAACATCCAGAAGGAATCCACCCTTCATTTGGTGCTTAGATTGAGAGGTGGAATGCAGATTTTTGTGAAGACTTTGACGGGAAAGACTATTACTTTGGAGGTGGAGAGTTCAGATACTATTGATAATGTTAAAGCTAAGATTCAAGATAAGGAGGGTATCCCTCCAGATCAGCAGAGGCTTATCTTTGCTGGCAAGCAACTTGAAGATGGAAGGACCCTTGCTGATTATAATATCCAAAAGGAATCCACTCTTCATTTGGTTTTGCGGCTTCGTGGTGGTATGCAAATTTTTGTGAAGACCCTTACCGGAAAAACTATTACTTTGGAGGTTGAGAGTTCTGATACAATTGATAATGTCAAGGCTAAAATTCAGGATAAAGAGGGCATTCCTCCAGACCAGCAGAGACTAATTTTTGCCGGAAAGCAATTGGAGGATGGTCGTACTTTGGCTGATTATAATATCCAGAAGGAATCTACTTTGCATTTGGTTTTGAGGCTTCGTGGTGGCATGCAAATATTTGTGAAGACACTTACTGGGAAGACTATTACCTTGGAGGTGGAAAGCTCTGATACTATTGATAATGTGAAAGCAAAGATACAAGATAAGGAGGGTATTCCCCCAGATCAGCAGAGGCTTATTTTTGCTGGCAAGCAGTTGGAGGATGGTCGTACTCTGGCAGATTACAATATTCAGAAAGAATCTACCCTTCATCTTGTTCTTCGTCTCCGTGGTGGCTTCTAA
Protein sequence

>Msa0609220

MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGF*