Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1175350 | XP_013444510.1 | 96.369 | 358 | 9 | 1 | 1 | 358 | 1 | 354 | 0.0 | 708 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1175350 | sp|Q7TND5|RPF1_MOUSE | 49.538 | 325 | 135 | 5 | 36 | 358 | 52 | 349 | 2.05e-94 | 288 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0008200 | Msa1175350 | 0.810738 | 9.930048e-51 | -8.615850e-47 |
| Msa0017730 | Msa1175350 | 0.814631 | 1.396618e-51 | -8.615850e-47 |
| Msa0029630 | Msa1175350 | 0.809643 | 1.709624e-50 | -8.615850e-47 |
| Msa0032810 | Msa1175350 | 0.845259 | 4.539450e-59 | -8.615850e-47 |
| Msa0036540 | Msa1175350 | 0.803575 | 3.265144e-49 | -8.615850e-47 |
| Msa0037250 | Msa1175350 | 0.808230 | 3.429992e-50 | -8.615850e-47 |
| Msa0043860 | Msa1175350 | 0.811239 | 7.733185e-51 | -8.615850e-47 |
| Msa0044990 | Msa1175350 | 0.802274 | 6.063606e-49 | -8.615850e-47 |
| Msa0068020 | Msa1175350 | 0.826240 | 3.023411e-54 | -8.615850e-47 |
| Msa0072420 | Msa1175350 | 0.839283 | 1.738130e-57 | -8.615850e-47 |
| Msa0080730 | Msa1175350 | 0.819741 | 9.901894e-53 | -8.615850e-47 |
| Msa0093010 | Msa1175350 | 0.809540 | 1.799228e-50 | -8.615850e-47 |
| Msa0103240 | Msa1175350 | 0.800340 | 1.509302e-48 | -8.615850e-47 |
| Msa0113240 | Msa1175350 | 0.820313 | 7.325994e-53 | -8.615850e-47 |
| Msa0115870 | Msa1175350 | 0.830716 | 2.510285e-55 | -8.615850e-47 |
| Msa0116380 | Msa1175350 | 0.808063 | 3.723673e-50 | -8.615850e-47 |
| Msa0119900 | Msa1175350 | 0.811741 | 6.014468e-51 | -8.615850e-47 |
| Msa0610550 | Msa1175350 | 0.862534 | 4.734421e-64 | -8.615850e-47 |
| Msa0615580 | Msa1175350 | 0.843366 | 1.464260e-58 | -8.615850e-47 |
| Msa0633570 | Msa1175350 | 0.802502 | 5.442174e-49 | -8.615850e-47 |
| Msa0634890 | Msa1175350 | 0.822861 | 1.888388e-53 | -8.615850e-47 |
| Msa0642970 | Msa1175350 | 0.804576 | 2.021318e-49 | -8.615850e-47 |
| Msa0662220 | Msa1175350 | 0.808002 | 3.835850e-50 | -8.615850e-47 |
| Msa0666230 | Msa1175350 | 0.829715 | 4.407736e-55 | -8.615850e-47 |
| Msa0672100 | Msa1175350 | 0.830065 | 3.621611e-55 | -8.615850e-47 |
| Msa0690770 | Msa1175350 | 0.813807 | 2.123171e-51 | -8.615850e-47 |
| Msa0693210 | Msa1175350 | 0.860073 | 2.662850e-63 | -8.615850e-47 |
| Msa0698780 | Msa1175350 | 0.844803 | 6.027341e-59 | -8.615850e-47 |
| Msa0699190 | Msa1175350 | 0.824617 | 7.324293e-54 | -8.615850e-47 |
| Msa0706500 | Msa1175350 | 0.812390 | 4.343048e-51 | -8.615850e-47 |
| Msa0708000 | Msa1175350 | -0.819724 | 9.994153e-53 | -8.615850e-47 |
| Msa0712860 | Msa1175350 | 0.804534 | 2.063319e-49 | -8.615850e-47 |
| Msa0766080 | Msa1175350 | 0.818920 | 1.523450e-52 | -8.615850e-47 |
| Msa0780930 | Msa1175350 | 0.802610 | 5.169388e-49 | -8.615850e-47 |
| Msa0808800 | Msa1175350 | 0.838960 | 2.108477e-57 | -8.615850e-47 |
| Msa0828590 | Msa1175350 | 0.807871 | 4.089818e-50 | -8.615850e-47 |
| Msa0833190 | Msa1175350 | -0.825626 | 4.231355e-54 | -8.615850e-47 |
| Msa0120880 | Msa1175350 | 0.821130 | 4.755898e-53 | -8.615850e-47 |
| Msa0122530 | Msa1175350 | 0.804153 | 2.476305e-49 | -8.615850e-47 |
| Msa0125450 | Msa1175350 | 0.801702 | 7.947802e-49 | -8.615850e-47 |
| Msa0140770 | Msa1175350 | -0.808885 | 2.485766e-50 | -8.615850e-47 |
| Msa0159440 | Msa1175350 | 0.815410 | 9.377081e-52 | -8.615850e-47 |
| Msa0177960 | Msa1175350 | 0.847859 | 8.857595e-60 | -8.615850e-47 |
| Msa0178950 | Msa1175350 | 0.803795 | 2.938948e-49 | -8.615850e-47 |
| Msa0179030 | Msa1175350 | 0.831243 | 1.864078e-55 | -8.615850e-47 |
| Msa0190590 | Msa1175350 | 0.834584 | 2.754205e-56 | -8.615850e-47 |
| Msa0190870 | Msa1175350 | 0.804047 | 2.605031e-49 | -8.615850e-47 |
| Msa0199340 | Msa1175350 | 0.810456 | 1.142663e-50 | -8.615850e-47 |
| Msa0202490 | Msa1175350 | 0.848868 | 4.659239e-60 | -8.615850e-47 |
| Msa0204960 | Msa1175350 | 0.830412 | 2.980688e-55 | -8.615850e-47 |
| Msa0206690 | Msa1175350 | 0.809461 | 1.871152e-50 | -8.615850e-47 |
| Msa0207670 | Msa1175350 | 0.810848 | 9.396630e-51 | -8.615850e-47 |
| Msa0207700 | Msa1175350 | 0.802023 | 6.827924e-49 | -8.615850e-47 |
| Msa0209350 | Msa1175350 | 0.801472 | 8.861501e-49 | -8.615850e-47 |
| Msa0215990 | Msa1175350 | 0.831405 | 1.700462e-55 | -8.615850e-47 |
| Msa0217670 | Msa1175350 | 0.826234 | 3.033862e-54 | -8.615850e-47 |
| Msa0218720 | Msa1175350 | 0.840456 | 8.602637e-58 | -8.615850e-47 |
| Msa0230490 | Msa1175350 | 0.807526 | 4.841879e-50 | -8.615850e-47 |
| Msa0230520 | Msa1175350 | 0.872374 | 3.339256e-67 | -8.615850e-47 |
| Msa0371500 | Msa1175350 | 0.826483 | 2.646085e-54 | -8.615850e-47 |
| Msa0376820 | Msa1175350 | 0.811925 | 5.484865e-51 | -8.615850e-47 |
| Msa0377820 | Msa1175350 | 0.859339 | 4.429683e-63 | -8.615850e-47 |
| Msa0385500 | Msa1175350 | 0.880838 | 3.947154e-70 | -8.615850e-47 |
| Msa0404630 | Msa1175350 | 0.812263 | 4.629875e-51 | -8.615850e-47 |
| Msa0413530 | Msa1175350 | 0.803034 | 4.227174e-49 | -8.615850e-47 |
| Msa0419720 | Msa1175350 | 0.810781 | 9.716874e-51 | -8.615850e-47 |
| Msa0423750 | Msa1175350 | 0.853921 | 1.735969e-61 | -8.615850e-47 |
| Msa0426580 | Msa1175350 | 0.883882 | 3.079598e-71 | -8.615850e-47 |
| Msa0427860 | Msa1175350 | -0.806233 | 9.088212e-50 | -8.615850e-47 |
| Msa0431980 | Msa1175350 | 0.827170 | 1.813988e-54 | -8.615850e-47 |
| Msa0437020 | Msa1175350 | 0.816495 | 5.370956e-52 | -8.615850e-47 |
| Msa0443390 | Msa1175350 | 0.840863 | 6.731024e-58 | -8.615850e-47 |
| Msa0456430 | Msa1175350 | 0.810899 | 9.163624e-51 | -8.615850e-47 |
| Msa0458370 | Msa1175350 | -0.828429 | 9.034046e-55 | -8.615850e-47 |
| Msa0460740 | Msa1175350 | 0.806995 | 6.275270e-50 | -8.615850e-47 |
| Msa0462600 | Msa1175350 | 0.843143 | 1.679076e-58 | -8.615850e-47 |
| Msa0472130 | Msa1175350 | 0.803163 | 3.973915e-49 | -8.615850e-47 |
| Msa0472930 | Msa1175350 | 0.866994 | 1.897477e-65 | -8.615850e-47 |
| Msa0474090 | Msa1175350 | -0.812342 | 4.448842e-51 | -8.615850e-47 |
| Msa0479760 | Msa1175350 | -0.806272 | 8.917726e-50 | -8.615850e-47 |
| Msa0980540 | Msa1175350 | 0.807124 | 5.890841e-50 | -8.615850e-47 |
| Msa0992550 | Msa1175350 | 0.839992 | 1.136744e-57 | -8.615850e-47 |
| Msa1021520 | Msa1175350 | 0.808370 | 3.202502e-50 | -8.615850e-47 |
| Msa1039810 | Msa1175350 | 0.854149 | 1.491275e-61 | -8.615850e-47 |
| Msa1039900 | Msa1175350 | 0.830218 | 3.324359e-55 | -8.615850e-47 |
| Msa1059300 | Msa1175350 | 0.802062 | 6.702888e-49 | -8.615850e-47 |
| Msa1060260 | Msa1175350 | 0.804703 | 1.901584e-49 | -8.615850e-47 |
| Msa1072710 | Msa1175350 | 0.802137 | 6.471133e-49 | -8.615850e-47 |
| Msa0244980 | Msa1175350 | 0.815870 | 7.407403e-52 | -8.615850e-47 |
| Msa0245430 | Msa1175350 | 0.821350 | 4.231278e-53 | -8.615850e-47 |
| Msa0245580 | Msa1175350 | 0.851291 | 9.766711e-61 | -8.615850e-47 |
| Msa0249580 | Msa1175350 | 0.800399 | 1.467814e-48 | -8.615850e-47 |
| Msa0256140 | Msa1175350 | 0.831262 | 1.844522e-55 | -8.615850e-47 |
| Msa0257490 | Msa1175350 | 0.848239 | 6.956054e-60 | -8.615850e-47 |
| Msa0269470 | Msa1175350 | 0.806874 | 6.655841e-50 | -8.615850e-47 |
| Msa0280370 | Msa1175350 | 0.847380 | 1.199412e-59 | -8.615850e-47 |
| Msa0281530 | Msa1175350 | 0.844521 | 7.179819e-59 | -8.615850e-47 |
| Msa0283420 | Msa1175350 | 0.803040 | 4.214520e-49 | -8.615850e-47 |
| Msa0284180 | Msa1175350 | 0.853157 | 2.875956e-61 | -8.615850e-47 |
| Msa0296250 | Msa1175350 | 0.851106 | 1.101585e-60 | -8.615850e-47 |
| Msa0296790 | Msa1175350 | 0.847689 | 9.865952e-60 | -8.615850e-47 |
| Msa0300280 | Msa1175350 | 0.823033 | 1.721659e-53 | -8.615850e-47 |
| Msa0305780 | Msa1175350 | 0.811880 | 5.611007e-51 | -8.615850e-47 |
| Msa0317910 | Msa1175350 | 0.852034 | 6.016868e-61 | -8.615850e-47 |
| Msa0319640 | Msa1175350 | 0.819653 | 1.037176e-52 | -8.615850e-47 |
| Msa0320590 | Msa1175350 | 0.846084 | 2.711513e-59 | -8.615850e-47 |
| Msa0322240 | Msa1175350 | 0.805979 | 1.027445e-49 | -8.615850e-47 |
| Msa0332640 | Msa1175350 | 0.828380 | 9.284015e-55 | -8.615850e-47 |
| Msa0336450 | Msa1175350 | 0.813269 | 2.787831e-51 | -8.615850e-47 |
| Msa0336540 | Msa1175350 | 0.828544 | 8.476360e-55 | -8.615850e-47 |
| Msa0343500 | Msa1175350 | 0.804153 | 2.476305e-49 | -8.615850e-47 |
| Msa0348830 | Msa1175350 | 0.849830 | 2.513604e-60 | -8.615850e-47 |
| Msa0358770 | Msa1175350 | 0.823104 | 1.657400e-53 | -8.615850e-47 |
| Msa1122310 | Msa1175350 | -0.819806 | 9.572871e-53 | -8.615850e-47 |
| Msa1123350 | Msa1175350 | 0.801489 | 8.788079e-49 | -8.615850e-47 |
| Msa1126830 | Msa1175350 | 0.836108 | 1.135061e-56 | -8.615850e-47 |
| Msa1128280 | Msa1175350 | 0.849753 | 2.640980e-60 | -8.615850e-47 |
| Msa1165270 | Msa1175350 | 0.862321 | 5.504447e-64 | -8.615850e-47 |
| Msa1165780 | Msa1175350 | 0.861592 | 9.206790e-64 | -8.615850e-47 |
| Msa1175350 | Msa1195300 | 0.827204 | 1.780297e-54 | -8.615850e-47 |
| Msa1175350 | Msa1206650 | 0.800552 | 1.365886e-48 | -8.615850e-47 |
| Msa1175350 | Msa1208020 | 0.855043 | 8.219351e-62 | -8.615850e-47 |
| Msa1175350 | Msa1228040 | 0.803093 | 4.109690e-49 | -8.615850e-47 |
| Msa1175350 | Msa1234830 | 0.809656 | 1.699003e-50 | -8.615850e-47 |
| Msa1175350 | Msa1262890 | 0.828045 | 1.118105e-54 | -8.615850e-47 |
| Msa1175350 | Msa1264210 | 0.832582 | 8.708757e-56 | -8.615850e-47 |
| Msa1175350 | Msa1267830 | 0.821932 | 3.104332e-53 | -8.615850e-47 |
| Msa1175350 | Msa1277260 | 0.895363 | 1.029062e-75 | -8.615850e-47 |
| Msa1175350 | Msa1296830 | 0.800372 | 1.486307e-48 | -8.615850e-47 |
| Msa1175350 | Msa1315890 | 0.927004 | 2.146526e-91 | -8.615850e-47 |
| Msa1175350 | Msa1329750 | 0.812632 | 3.845358e-51 | -8.615850e-47 |
| Msa1175350 | Msa1331250 | 0.827783 | 1.293135e-54 | -8.615850e-47 |
| Msa1175350 | Msa1336560 | 0.803862 | 2.846399e-49 | -8.615850e-47 |
| Msa1175350 | Msa1341060 | 0.855849 | 4.786794e-62 | -8.615850e-47 |
| Msa1175350 | Msa1351540 | 0.849342 | 3.440094e-60 | -8.615850e-47 |
| Msa1175350 | Msa1368710 | 0.805273 | 1.445609e-49 | -8.615850e-47 |
| Msa1175350 | Msa1369190 | 0.813299 | 2.745544e-51 | -8.615850e-47 |
| Msa1175350 | Msa1374830 | 0.841366 | 4.962654e-58 | -8.615850e-47 |
| Msa1175350 | Msa1376660 | 0.835351 | 1.764928e-56 | -8.615850e-47 |
| Msa1175350 | Msa1392980 | 0.804607 | 1.992180e-49 | -8.615850e-47 |
| Msa1175350 | Msa1413260 | 0.810525 | 1.103972e-50 | -8.615850e-47 |
| Msa1175350 | Msa1420430 | 0.823781 | 1.151618e-53 | -8.615850e-47 |
| Msa1175350 | Msa1425670 | 0.814234 | 1.709254e-51 | -8.615850e-47 |
| Msa1175350 | Msa1434090 | 0.802351 | 5.846717e-49 | -8.615850e-47 |
| Msa1175350 | Msa1437860 | 0.819755 | 9.829996e-53 | -8.615850e-47 |
| Msa1175350 | Msa1445370 | 0.822782 | 1.970467e-53 | -8.615850e-47 |
| Msa1175350 | Msa1456050 | 0.820651 | 6.129219e-53 | -8.615850e-47 |
| Msa1175350 | Msa1458290 | 0.807928 | 3.977863e-50 | -8.615850e-47 |
| Msa0511770 | Msa1175350 | 0.842549 | 2.416627e-58 | -8.615850e-47 |
| Msa0517590 | Msa1175350 | 0.865130 | 7.382101e-65 | -8.615850e-47 |
| Msa0531650 | Msa1175350 | 0.815634 | 8.359207e-52 | -8.615850e-47 |
| Msa0534750 | Msa1175350 | 0.839159 | 1.872486e-57 | -8.615850e-47 |
| Msa0547160 | Msa1175350 | 0.800031 | 1.743993e-48 | -8.615850e-47 |
| Msa0549450 | Msa1175350 | 0.820954 | 5.219254e-53 | -8.615850e-47 |
| Msa0549950 | Msa1175350 | 0.800143 | 1.654632e-48 | -8.615850e-47 |
| Msa0580280 | Msa1175350 | 0.800352 | 1.500416e-48 | -8.615850e-47 |
| Msa0581110 | Msa1175350 | 0.833025 | 6.758426e-56 | -8.615850e-47 |
| Msa0588630 | Msa1175350 | -0.832868 | 7.395786e-56 | -8.615850e-47 |
| Msa0870750 | Msa1175350 | 0.831347 | 1.757568e-55 | -8.615850e-47 |
| Msa0892640 | Msa1175350 | 0.818539 | 1.859772e-52 | -8.615850e-47 |
| Msa0903870 | Msa1175350 | 0.804972 | 1.670981e-49 | -8.615850e-47 |
| Msa0913240 | Msa1175350 | 0.801346 | 9.403862e-49 | -8.615850e-47 |
| Msa0958000 | Msa1175350 | 0.829821 | 4.153917e-55 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1175350 | MtrunA17_Chr8g0345651 | 96.369 | 358 | 9 | 1 | 1 | 358 | 1 | 354 | 0.0 | 708 |
| Msa1175350 | MtrunA17_Chr3g0084381 | 33.219 | 292 | 142 | 7 | 70 | 358 | 50 | 291 | 9.15e-42 | 147 |
| Msa1175350 | MtrunA17_Chr1g0176411 | 80.357 | 56 | 11 | 0 | 40 | 95 | 1 | 56 | 3.59e-20 | 83.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1175350 | AT4G01560.1 | 72.829 | 357 | 82 | 4 | 3 | 358 | 1 | 343 | 0.0 | 524 |
| Msa1175350 | AT1G63780.1 | 37.959 | 245 | 124 | 6 | 117 | 358 | 73 | 292 | 1.20e-44 | 155 |
Find 95 sgRNAs with CRISPR-Local
Find 377 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTCGACTTGTGTCCATTTC+CGG | 0.170540 | 8_1:-6661518 | None:intergenic |
| TATTCATTTGTGACGAATTT+AGG | 0.175785 | 8_1:+6661868 | Msa1175350:three_prime_UTR |
| TGTCTTGGAACTTTGCATTT+TGG | 0.220254 | 8_1:+6661560 | Msa1175350:three_prime_UTR |
| CCCCAAGATCCCGAGTTTAA+AGG | 0.228228 | 8_1:+6660197 | Msa1175350:CDS |
| CCCTTTAAACTCGGGATCTT+GGG | 0.231737 | 8_1:-6660198 | None:intergenic |
| TTCCGTTTCTGTTTCCGTTC+TGG | 0.284839 | 8_1:-6655932 | None:intergenic |
| CAGCTGGAACTTGGTTAATC+TGG | 0.296287 | 8_1:+6661592 | Msa1175350:three_prime_UTR |
| GCCCTTTAAACTCGGGATCT+TGG | 0.298570 | 8_1:-6660199 | None:intergenic |
| TCAGACGCTCTCTTGATTGT+TGG | 0.315062 | 8_1:+6659245 | Msa1175350:intron |
| TAAAACAATTGCCCGTCTTC+AGG | 0.332177 | 8_1:+6660448 | Msa1175350:CDS |
| GCAAGTGGTGATTAATATCT+TGG | 0.337449 | 8_1:-6658668 | None:intergenic |
| ATTTGTTTGCAGCTATTTGC+TGG | 0.345769 | 8_1:+6658598 | Msa1175350:intron |
| TGTTGAATATGCAAATAAAA+AGG | 0.345995 | 8_1:+6659089 | Msa1175350:CDS |
| TTTAATATCAGAATTGCTTC+AGG | 0.350037 | 8_1:+6658916 | Msa1175350:CDS |
| AAATGAGCAGTAGGTCCTTC+AGG | 0.362193 | 8_1:-6659272 | None:intergenic |
| CTCTTGAAGTAATGTGCATT+TGG | 0.364971 | 8_1:-6658944 | None:intergenic |
| CCCAAGATCCCGAGTTTAAA+GGG | 0.366033 | 8_1:+6660198 | Msa1175350:CDS |
| TTTCCACCGATCGCCATTGT+AGG | 0.381132 | 8_1:-6655856 | None:intergenic |
| AACTCAACCTCTTCATCATC+AGG | 0.420118 | 8_1:-6656266 | None:intergenic |
| ATTAAACTTAGAGATCTCTA+TGG | 0.431932 | 8_1:-6661821 | None:intergenic |
| TCAACAAACATATAGATTTG+TGG | 0.437200 | 8_1:-6661736 | None:intergenic |
| TGTGTCCCCTTGCAGAATCA+TGG | 0.442254 | 8_1:+6659749 | Msa1175350:intron |
| TAATCATCGAAGGACGGAAC+GGG | 0.458251 | 8_1:-6655963 | None:intergenic |
| ACTGCATTTCAGCTGGAACT+TGG | 0.475547 | 8_1:+6661583 | Msa1175350:three_prime_UTR |
| AGCTCAGGCTGGTGACTGGT+TGG | 0.478829 | 8_1:-6659776 | None:intergenic |
| CACTTGCCGCTTCAATTCTA+CGG | 0.479733 | 8_1:+6658684 | Msa1175350:CDS |
| GCTCAGGCTGGTGACTGGTT+GGG | 0.480294 | 8_1:-6659775 | None:intergenic |
| GTCTTCGGCACCTTCTTCTC+CGG | 0.480606 | 8_1:-6656203 | None:intergenic |
| TGTCAAATGTTCCATGCTGC+AGG | 0.481553 | 8_1:-6661346 | None:intergenic |
| TTGATTGTTGGCTTACCTGA+AGG | 0.482227 | 8_1:+6659257 | Msa1175350:CDS |
| AGAGAGACTTCGTATTCTTC+CGG | 0.485125 | 8_1:+6660246 | Msa1175350:CDS |
| TCGTATTCTTCCGGCATCAT+CGG | 0.486433 | 8_1:+6660255 | Msa1175350:CDS |
| AACCAGAACGGAAACAGAAA+CGG | 0.491238 | 8_1:+6655930 | Msa1175350:CDS |
| ATACGAAGTCTCTCTGGTTG+TGG | 0.492052 | 8_1:-6660238 | None:intergenic |
| CGAAGACGATTGAAAATACA+AGG | 0.499632 | 8_1:+6656219 | Msa1175350:CDS |
| GGAAGAATACGAAGTCTCTC+TGG | 0.499644 | 8_1:-6660244 | None:intergenic |
| TACACGTCGCCCTTTAAACT+CGG | 0.500125 | 8_1:-6660207 | None:intergenic |
| CACAAGCTCAGGCTGGTGAC+TGG | 0.500662 | 8_1:-6659780 | None:intergenic |
| CAAGTGGTGATTAATATCTT+GGG | 0.501651 | 8_1:-6658667 | None:intergenic |
| AGAGAAGAAGAAAAGGATTG+AGG | 0.512078 | 8_1:-6655806 | None:intergenic |
| AAGTTGTTCAACACAAGCTC+AGG | 0.513960 | 8_1:-6659791 | None:intergenic |
| CCTTTAAACTCGGGATCTTG+GGG | 0.514110 | 8_1:-6660197 | None:intergenic |
| GTTGTAGCCTCCGGAGAAGA+AGG | 0.514510 | 8_1:+6656193 | Msa1175350:intron |
| CTTCTTCTGATGCTTAAGCT+TGG | 0.520074 | 8_1:-6656016 | None:intergenic |
| CCTACTTGGTTCCCTCCGAT+TGG | 0.521655 | 8_1:-6659139 | None:intergenic |
| TTGTAGTTGTACACACCAAT+CGG | 0.528856 | 8_1:+6659124 | Msa1175350:CDS |
| AGCAATTCTGATATTAAAGC+AGG | 0.533676 | 8_1:-6658911 | None:intergenic |
| AACAACTTCACAACACGCCT+AGG | 0.543084 | 8_1:+6659806 | Msa1175350:CDS |
| TCTTTGTTCTTAATCATCGA+AGG | 0.545212 | 8_1:-6655973 | None:intergenic |
| GGAACATTTGACACTAAAAG+TGG | 0.547527 | 8_1:+6661356 | Msa1175350:CDS |
| CTAAAAGTGGAGAATATGAG+TGG | 0.547620 | 8_1:+6661369 | Msa1175350:CDS |
| ATTGACACCAACCTGAAGAC+GGG | 0.550528 | 8_1:-6660459 | None:intergenic |
| ATCAATGTTGTGTACAAAGA+TGG | 0.562430 | 8_1:-6661703 | None:intergenic |
| CATTTGTGACGAATTTAGGT+GGG | 0.563780 | 8_1:+6661872 | Msa1175350:three_prime_UTR |
| TCATTTGTGACGAATTTAGG+TGG | 0.564985 | 8_1:+6661871 | Msa1175350:three_prime_UTR |
| CGCGGTGGTTATTCCTACAA+TGG | 0.565034 | 8_1:+6655843 | Msa1175350:exon |
| CAATGGCGATCGGTGGAAAG+AGG | 0.566083 | 8_1:+6655860 | Msa1175350:exon |
| TTAATCATCGAAGGACGGAA+CGG | 0.568387 | 8_1:-6655964 | None:intergenic |
| GTGAGTTTGAAATGAGCAGT+AGG | 0.571962 | 8_1:-6659281 | None:intergenic |
| AAGTTCCAAGACAAGGTCAC+AGG | 0.582687 | 8_1:-6661550 | None:intergenic |
| TAGGAATAACCACCGCGCGA+GGG | 0.584404 | 8_1:-6655837 | None:intergenic |
| AAGAATTGTACCGATGATGC+CGG | 0.586114 | 8_1:-6660265 | None:intergenic |
| GTTAAAAGAGCTATTGAGCT+CGG | 0.586757 | 8_1:+6656078 | Msa1175350:CDS |
| AATTGACACCAACCTGAAGA+CGG | 0.586946 | 8_1:-6660460 | None:intergenic |
| TGTTCTTAATCATCGAAGGA+CGG | 0.587385 | 8_1:-6655969 | None:intergenic |
| TTGCAAGCCTGATGATGAAG+AGG | 0.594460 | 8_1:+6656259 | Msa1175350:CDS |
| TGTTCAACACAAGCTCAGGC+TGG | 0.595435 | 8_1:-6659787 | None:intergenic |
| AATTCAGTTCAATATTAAAG+CGG | 0.596200 | 8_1:+6658635 | Msa1175350:CDS |
| ACCTTCCAACTCGATGCCCT+AGG | 0.597115 | 8_1:-6659823 | None:intergenic |
| AGAATATGAGTGGGTTCACA+AGG | 0.597660 | 8_1:+6661379 | Msa1175350:CDS |
| GGAAACAGAAACGGAAACGA+AGG | 0.598065 | 8_1:+6655939 | Msa1175350:CDS |
| TTCGGCACCTTCTTCTCCGG+AGG | 0.599893 | 8_1:-6656200 | None:intergenic |
| GAAGTCTCTCTGGTTGTGGA+AGG | 0.602092 | 8_1:-6660234 | None:intergenic |
| CGTAGAATTGAAGCGGCAAG+TGG | 0.609118 | 8_1:-6658683 | None:intergenic |
| GTTATTCCTACAATGGCGAT+CGG | 0.609248 | 8_1:+6655850 | Msa1175350:exon |
| AGCTATTGAGCTCGGCGAAG+AGG | 0.611918 | 8_1:+6656086 | Msa1175350:CDS |
| AACATACCGTAGAATTGAAG+CGG | 0.614066 | 8_1:-6658690 | None:intergenic |
| ATGTTGTGTACAAAGATGGT+AGG | 0.617202 | 8_1:-6661699 | None:intergenic |
| TTAACTTCAATGTGAAACGA+GGG | 0.623098 | 8_1:-6661319 | None:intergenic |
| ACACGTCGCCCTTTAAACTC+GGG | 0.626716 | 8_1:-6660206 | None:intergenic |
| CGGAAATGGACACAAGTCGA+AGG | 0.626913 | 8_1:+6661519 | Msa1175350:CDS |
| GCCTAGGGCATCGAGTTGGA+AGG | 0.627771 | 8_1:+6659822 | Msa1175350:CDS |
| ACACGCCTAGGGCATCGAGT+TGG | 0.629464 | 8_1:+6659818 | Msa1175350:CDS |
| ACAACTTCACAACACGCCTA+GGG | 0.637320 | 8_1:+6659807 | Msa1175350:CDS |
| ATTCCTACAATGGCGATCGG+TGG | 0.646182 | 8_1:+6655853 | Msa1175350:exon |
| AATGCACATTACTTCAAGAG+AGG | 0.646448 | 8_1:+6658947 | Msa1175350:CDS |
| AAGCGCAACAATGATTCAGA+CGG | 0.648847 | 8_1:+6655883 | Msa1175350:CDS |
| AAATGCAAAGTTCCAAGACA+AGG | 0.656551 | 8_1:-6661557 | None:intergenic |
| TAGTTGTACACACCAATCGG+AGG | 0.665484 | 8_1:+6659127 | Msa1175350:CDS |
| TAAAAGTGGAGAATATGAGT+GGG | 0.666851 | 8_1:+6661370 | Msa1175350:CDS |
| CTTTAAACTCGGGATCTTGG+GGG | 0.666978 | 8_1:-6660196 | None:intergenic |
| AAATGGACACAAGTCGAAGG+AGG | 0.670517 | 8_1:+6661522 | Msa1175350:CDS |
| TTTAACTTCAATGTGAAACG+AGG | 0.679925 | 8_1:-6661320 | None:intergenic |
| AGTTGTACACACCAATCGGA+GGG | 0.688476 | 8_1:+6659128 | Msa1175350:CDS |
| GAAGACGATTGAAAATACAA+GGG | 0.727075 | 8_1:+6656220 | Msa1175350:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTCTTTTGTTTTTTTTTT+TGG | + | chr8_1:6657193-6657212 | Msa1175350:intron | 10.0% |
| !!! | TTTCTTTTGTTTTTTTTTTT+GGG | + | chr8_1:6657194-6657213 | Msa1175350:intron | 10.0% |
| !!! | AATATTTCTAGTTTTTAAAT+GGG | - | chr8_1:6657395-6657414 | None:intergenic | 10.0% |
| !!! | AAATATTTCTAGTTTTTAAA+TGG | - | chr8_1:6657396-6657415 | None:intergenic | 10.0% |
| !! | ACATAATAATTAGTTAAAAA+GGG | - | chr8_1:6657516-6657535 | None:intergenic | 10.0% |
| !! | TACATAATAATTAGTTAAAA+AGG | - | chr8_1:6657517-6657536 | None:intergenic | 10.0% |
| !!! | ATATTTGTTATAATGAAAAA+TGG | - | chr8_1:6660064-6660083 | None:intergenic | 10.0% |
| !!! | AGAATATATATTTTGGTTAT+TGG | + | chr8_1:6656358-6656377 | Msa1175350:intron | 15.0% |
| !! | TTTAGATAATTAGAAAATGA+TGG | + | chr8_1:6656569-6656588 | Msa1175350:intron | 15.0% |
| !!! | GAACTTAATAGAATATTTTT+AGG | + | chr8_1:6656668-6656687 | Msa1175350:intron | 15.0% |
| !!! | TTCTTTTGTTTTTTTTTTTG+GGG | + | chr8_1:6657195-6657214 | Msa1175350:intron | 15.0% |
| !!! | AAAAACTAGAAATATTTTGT+TGG | + | chr8_1:6657399-6657418 | Msa1175350:intron | 15.0% |
| !!! | AAATGATGTATTCAATTTTT+TGG | + | chr8_1:6657423-6657442 | Msa1175350:intron | 15.0% |
| !! | CAATACTTAAAATATACAAT+GGG | + | chr8_1:6657787-6657806 | Msa1175350:intron | 15.0% |
| !!! | AACTATTTTAAGAGAATTTA+AGG | + | chr8_1:6658251-6658270 | Msa1175350:intron | 15.0% |
| !!! | ACTATTTTAAGAGAATTTAA+GGG | + | chr8_1:6658252-6658271 | Msa1175350:intron | 15.0% |
| !! | AACTATAGATTATATAAACT+AGG | + | chr8_1:6658431-6658450 | Msa1175350:intron | 15.0% |
| !! | ACTATAGATTATATAAACTA+GGG | + | chr8_1:6658432-6658451 | Msa1175350:intron | 15.0% |
| !! | GTTGTTTATAAATATAACAA+TGG | + | chr8_1:6659343-6659362 | Msa1175350:intron | 15.0% |
| !! | AAAAACAAAATCAACAAATA+AGG | - | chr8_1:6660153-6660172 | None:intergenic | 15.0% |
| !! | ACATGAAAAAAAATTCATTA+AGG | + | chr8_1:6661101-6661120 | Msa1175350:intron | 15.0% |
| !!! | TATATAATTTTAACTTGAGA+TGG | + | chr8_1:6661786-6661805 | Msa1175350:three_prime_UTR | 15.0% |
| !! | CCAATCATACATAAAAATTT+AGG | - | chr8_1:6656314-6656333 | None:intergenic | 20.0% |
| !!! | CCTAAATTTTTATGTATGAT+TGG | + | chr8_1:6656311-6656330 | Msa1175350:intron | 20.0% |
| !!! | TGAGTGTAGAATATATATTT+TGG | + | chr8_1:6656351-6656370 | Msa1175350:intron | 20.0% |
| !! | AAAAAATAAACTATGATGCT+AGG | + | chr8_1:6656430-6656449 | Msa1175350:intron | 20.0% |
| !!! | ATATTTTTAGGTTTCAAAGT+TGG | + | chr8_1:6656680-6656699 | Msa1175350:intron | 20.0% |
| !!! | TGTTAGGATTTTATTATCAA+AGG | + | chr8_1:6656724-6656743 | Msa1175350:intron | 20.0% |
| !!! | GTTAGGATTTTATTATCAAA+GGG | + | chr8_1:6656725-6656744 | Msa1175350:intron | 20.0% |
| !! | ATCCATTCATTTATTTGAAT+AGG | + | chr8_1:6657060-6657079 | Msa1175350:intron | 20.0% |
| !!! | AATTTCGATCATTGATTTTT+GGG | + | chr8_1:6657575-6657594 | Msa1175350:intron | 20.0% |
| !!! | GAGATTAGAAATTTTTTCAA+CGG | - | chr8_1:6657703-6657722 | None:intergenic | 20.0% |
| !! | GCAATACTTAAAATATACAA+TGG | + | chr8_1:6657786-6657805 | Msa1175350:intron | 20.0% |
| !!! | AAAATATACAATGGGTTTTT+TGG | + | chr8_1:6657795-6657814 | Msa1175350:intron | 20.0% |
| !!! | AAATATACAATGGGTTTTTT+GGG | + | chr8_1:6657796-6657815 | Msa1175350:intron | 20.0% |
| !!! | TTTTTTTGCAATCACTTATT+TGG | + | chr8_1:6657928-6657947 | Msa1175350:intron | 20.0% |
| !!! | TTTTTTGCAATCACTTATTT+GGG | + | chr8_1:6657929-6657948 | Msa1175350:intron | 20.0% |
| !! | AGAGTATAAACCTATTAATT+TGG | - | chr8_1:6657972-6657991 | None:intergenic | 20.0% |
| !!! | ATTATTTTCAAGGCTTTTAA+AGG | - | chr8_1:6658063-6658082 | None:intergenic | 20.0% |
| !!! | AACAACATCATTATTTTCAA+TGG | - | chr8_1:6658187-6658206 | None:intergenic | 20.0% |
| !! | GAAAATAATGATGTTGTTAA+CGG | + | chr8_1:6658189-6658208 | Msa1175350:intron | 20.0% |
| !! | ATGTCTATTATAAAACTAGA+GGG | + | chr8_1:6658281-6658300 | Msa1175350:intron | 20.0% |
| !! | TTATTTCCTTTAAGCTTAAA+GGG | - | chr8_1:6658413-6658432 | None:intergenic | 20.0% |
| !!! | TTAGTCAACAGAATTTATTT+TGG | - | chr8_1:6658572-6658591 | None:intergenic | 20.0% |
| !! | AATTCAGTTCAATATTAAAG+CGG | + | chr8_1:6658635-6658654 | Msa1175350:CDS | 20.0% |
| !! | TATGATTTAAAAAAGGTGAT+GGG | + | chr8_1:6658974-6658993 | Msa1175350:intron | 20.0% |
| !! | TGTTGAATATGCAAATAAAA+AGG | + | chr8_1:6659089-6659108 | Msa1175350:CDS | 20.0% |
| !!! | ACAATCTTTAAAATATGAGT+AGG | - | chr8_1:6659185-6659204 | None:intergenic | 20.0% |
| !!! | CTCAATCTTTTTAATTTCTT+TGG | - | chr8_1:6660378-6660397 | None:intergenic | 20.0% |
| !! | ATTAAAAAGATTGAGTCTAA+AGG | + | chr8_1:6660383-6660402 | Msa1175350:CDS | 20.0% |
| !! | GAAAAAAAATTCATTAAGGA+TGG | + | chr8_1:6661105-6661124 | Msa1175350:intron | 20.0% |
| !! | ATGATGATAATACATAAATG+CGG | - | chr8_1:6661249-6661268 | None:intergenic | 20.0% |
| !!! | AATATTTAAAACAGCAATAC+TGG | - | chr8_1:6661420-6661439 | None:intergenic | 20.0% |
| !!! | CATTTCTCTTATATTTCTAA+CGG | + | chr8_1:6661455-6661474 | Msa1175350:intron | 20.0% |
| !!! | AGAATTTACATTTTGCTTAT+AGG | + | chr8_1:6661762-6661781 | Msa1175350:three_prime_UTR | 20.0% |
| ! | TAATTAGAAAATGATGGTAG+CGG | + | chr8_1:6656575-6656594 | Msa1175350:intron | 25.0% |
| ! | AGTTACTACGAGAAATTATA+TGG | + | chr8_1:6656620-6656639 | Msa1175350:intron | 25.0% |
| ! | TACGAGAAATTATATGGATT+TGG | + | chr8_1:6656626-6656645 | Msa1175350:intron | 25.0% |
| ! | GGATTTGGCTATTATAAAAT+AGG | + | chr8_1:6656641-6656660 | Msa1175350:intron | 25.0% |
| ! | CACCTATTCAAATAAATGAA+TGG | - | chr8_1:6657065-6657084 | None:intergenic | 25.0% |
| !!! | CAATTTCGATCATTGATTTT+TGG | + | chr8_1:6657574-6657593 | Msa1175350:intron | 25.0% |
| !! | TCACTTATTTGGGATAAAAA+TGG | + | chr8_1:6657939-6657958 | Msa1175350:intron | 25.0% |
| ! | TGGACAAAAACCAAATTAAT+AGG | + | chr8_1:6657959-6657978 | Msa1175350:intron | 25.0% |
| ! | AAAAGCCTTGAAAATAATGA+TGG | + | chr8_1:6658065-6658084 | Msa1175350:intron | 25.0% |
| !! | CAATTGTTGTAAACTTTTCA+AGG | - | chr8_1:6658118-6658137 | None:intergenic | 25.0% |
| ! | ACAACAATTGCAGTAATATT+TGG | + | chr8_1:6658128-6658147 | Msa1175350:intron | 25.0% |
| !!! | ATTTTAAGAGAATTTAAGGG+AGG | + | chr8_1:6658255-6658274 | Msa1175350:intron | 25.0% |
| ! | CATGTCTATTATAAAACTAG+AGG | + | chr8_1:6658280-6658299 | Msa1175350:intron | 25.0% |
| !! | GTTATTTCCTTTAAGCTTAA+AGG | - | chr8_1:6658414-6658433 | None:intergenic | 25.0% |
| !! | TACTCCTAAAAGTGTAAAAT+AGG | - | chr8_1:6658805-6658824 | None:intergenic | 25.0% |
| ! | TTTAATATCAGAATTGCTTC+AGG | + | chr8_1:6658916-6658935 | Msa1175350:CDS | 25.0% |
| ! | AGGAACCTATGATTTAAAAA+AGG | + | chr8_1:6658967-6658986 | Msa1175350:CDS | 25.0% |
| !!! | CATCACCTTTTTTAAATCAT+AGG | - | chr8_1:6658975-6658994 | None:intergenic | 25.0% |
| ! | CTATGATTTAAAAAAGGTGA+TGG | + | chr8_1:6658973-6658992 | Msa1175350:intron | 25.0% |
| !! | TGTTTTATGCAAGGATATTA+AGG | + | chr8_1:6659310-6659329 | Msa1175350:CDS | 25.0% |
| ! | TTCCACTTAAATTCTTAGAT+AGG | + | chr8_1:6659443-6659462 | Msa1175350:intron | 25.0% |
| ! | AAAGTGGAATTCATCTAAAT+AGG | - | chr8_1:6659628-6659647 | None:intergenic | 25.0% |
| ! | AACAAAGTCTAATCAAAAAG+TGG | - | chr8_1:6659644-6659663 | None:intergenic | 25.0% |
| !! | TTTGATTAGACTTTGTTATC+TGG | + | chr8_1:6659647-6659666 | Msa1175350:intron | 25.0% |
| ! | CTAAGCAGTAAGTATTATTA+TGG | + | chr8_1:6659986-6660005 | Msa1175350:intron | 25.0% |
| ! | ATTATAACAAATATCTCCTC+TGG | + | chr8_1:6660070-6660089 | Msa1175350:intron | 25.0% |
| !! | TGCCATTTGTTTCAAATTAT+TGG | + | chr8_1:6660302-6660321 | Msa1175350:intron | 25.0% |
| !! | CACCAATAATTTGAAACAAA+TGG | - | chr8_1:6660307-6660326 | None:intergenic | 25.0% |
| !! | AATTTACATTGACTAGTCAA+TGG | - | chr8_1:6660527-6660546 | None:intergenic | 25.0% |
| !!! | TTTTCATTGCTTTTATTGTG+TGG | + | chr8_1:6660583-6660602 | Msa1175350:intron | 25.0% |
| ! | CCACTATTATACATAACTTA+CGG | - | chr8_1:6660613-6660632 | None:intergenic | 25.0% |
| !!! | AATTCACTTTAAGAGAGTTT+TGG | - | chr8_1:6660896-6660915 | None:intergenic | 25.0% |
| ! | TAACTTAATGACTAACAAAG+GGG | - | chr8_1:6660944-6660963 | None:intergenic | 25.0% |
| ! | GTAACTTAATGACTAACAAA+GGG | - | chr8_1:6660945-6660964 | None:intergenic | 25.0% |
| ! | AGATTGCAATTGATCAATTA+AGG | - | chr8_1:6661163-6661182 | None:intergenic | 25.0% |
| ! | TAGAAGAATACTTAAATCCT+TGG | - | chr8_1:6661193-6661212 | None:intergenic | 25.0% |
| ! | TAATTTCTCCTTAAAAATGC+AGG | + | chr8_1:6661289-6661308 | Msa1175350:intron | 25.0% |
| !! | TGTTGTTATCTTGAAGTTTT+TGG | + | chr8_1:6661619-6661638 | Msa1175350:three_prime_UTR | 25.0% |
| ! | TCAACAAACATATAGATTTG+TGG | - | chr8_1:6661739-6661758 | None:intergenic | 25.0% |
| ! | ATTAAACTTAGAGATCTCTA+TGG | - | chr8_1:6661824-6661843 | None:intergenic | 25.0% |
| ! | TATTCATTTGTGACGAATTT+AGG | + | chr8_1:6661868-6661887 | Msa1175350:three_prime_UTR | 25.0% |
| ! | TTTTCGAAGAGAAGAAGAAA+AGG | - | chr8_1:6655816-6655835 | None:intergenic | 30.0% |
| TCTTTGTTCTTAATCATCGA+AGG | - | chr8_1:6655976-6655995 | None:intergenic | 30.0% | |
| ! | CTTGTATTTTCAATCGTCTT+CGG | - | chr8_1:6656221-6656240 | None:intergenic | 30.0% |
| GAAGACGATTGAAAATACAA+GGG | + | chr8_1:6656220-6656239 | Msa1175350:CDS | 30.0% | |
| TACACTGTGAGATTTGAATT+AGG | + | chr8_1:6656396-6656415 | Msa1175350:intron | 30.0% | |
| !! | AAGGAAACTTAGTTTGTAGT+TGG | + | chr8_1:6656780-6656799 | Msa1175350:intron | 30.0% |
| !!! | TTTAGTCATGCGTTTTGATT+TGG | + | chr8_1:6656832-6656851 | Msa1175350:intron | 30.0% |
| AAAGAACCCAAATTGTCATA+TGG | - | chr8_1:6656914-6656933 | None:intergenic | 30.0% | |
| ! | CAACTTGTTTGTTCTATGAA+TGG | + | chr8_1:6657030-6657049 | Msa1175350:intron | 30.0% |
| GTTTGTTCTATGAATGGTAT+TGG | + | chr8_1:6657036-6657055 | Msa1175350:intron | 30.0% | |
| !!! | TTTTTTTGCTTTGTGTGTGT+TGG | + | chr8_1:6657223-6657242 | Msa1175350:intron | 30.0% |
| CAACAGAAATTCTAAACAAC+AGG | - | chr8_1:6657303-6657322 | None:intergenic | 30.0% | |
| GACATTTACACAAAGCTTAA+GGG | - | chr8_1:6657617-6657636 | None:intergenic | 30.0% | |
| TGACATTTACACAAAGCTTA+AGG | - | chr8_1:6657618-6657637 | None:intergenic | 30.0% | |
| !!! | GAGTGTGGGTATTATTTTTT+AGG | - | chr8_1:6657744-6657763 | None:intergenic | 30.0% |
| AAATGATCTGAATCAACATG+TGG | - | chr8_1:6657897-6657916 | None:intergenic | 30.0% | |
| AATAGGTTTATACTCTGCAA+CGG | + | chr8_1:6657976-6657995 | Msa1175350:intron | 30.0% | |
| ACAATTGCAGTAATATTTGG+TGG | + | chr8_1:6658131-6658150 | Msa1175350:intron | 30.0% | |
| ! | AATATTTGGTGGTTTAGTGA+AGG | + | chr8_1:6658142-6658161 | Msa1175350:intron | 30.0% |
| TCTTTGCGTTAAGATATCTT+AGG | + | chr8_1:6658306-6658325 | Msa1175350:intron | 30.0% | |
| CTTTGCGTTAAGATATCTTA+GGG | + | chr8_1:6658307-6658326 | Msa1175350:intron | 30.0% | |
| TTTGCGTTAAGATATCTTAG+GGG | + | chr8_1:6658308-6658327 | Msa1175350:intron | 30.0% | |
| GCTATTCAACGAAAAATCAA+GGG | - | chr8_1:6658350-6658369 | None:intergenic | 30.0% | |
| AGCTATTCAACGAAAAATCA+AGG | - | chr8_1:6658351-6658370 | None:intergenic | 30.0% | |
| ACGAAACAAGAGTAATTCTT+GGG | + | chr8_1:6658464-6658483 | Msa1175350:intron | 30.0% | |
| CAAGTGGTGATTAATATCTT+GGG | - | chr8_1:6658670-6658689 | None:intergenic | 30.0% | |
| AAATCAAATCAAGAAGGCAA+GGG | - | chr8_1:6658777-6658796 | None:intergenic | 30.0% | |
| AGCAATTCTGATATTAAAGC+AGG | - | chr8_1:6658914-6658933 | None:intergenic | 30.0% | |
| !!! | CACAAATCTTGTTTTATGCA+AGG | + | chr8_1:6659301-6659320 | Msa1175350:CDS | 30.0% |
| CTCCTATCTAAGAATTTAAG+TGG | - | chr8_1:6659448-6659467 | None:intergenic | 30.0% | |
| TGGCACTAACAATATAAGAA+AGG | - | chr8_1:6660044-6660063 | None:intergenic | 30.0% | |
| ! | ACAGTGTTTCTATGTAATGA+TGG | + | chr8_1:6660096-6660115 | Msa1175350:intron | 30.0% |
| ! | CAGTGTTTCTATGTAATGAT+GGG | + | chr8_1:6660097-6660116 | Msa1175350:intron | 30.0% |
| AATATACCTAAGAACGTGAT+TGG | - | chr8_1:6660348-6660367 | None:intergenic | 30.0% | |
| CCGTAAGTTATGTATAATAG+TGG | + | chr8_1:6660610-6660629 | Msa1175350:intron | 30.0% | |
| ! | CAAATTATTGACTAGTAGTC+TGG | + | chr8_1:6660664-6660683 | Msa1175350:intron | 30.0% |
| ATTGTCTACTCATGTGATTT+AGG | + | chr8_1:6660695-6660714 | Msa1175350:intron | 30.0% | |
| CGTAACTTAATGACTAACAA+AGG | - | chr8_1:6660946-6660965 | None:intergenic | 30.0% | |
| CTATTTATTAAGTGCATGTG+AGG | - | chr8_1:6660998-6661017 | None:intergenic | 30.0% | |
| CTCACATGCACTTAATAAAT+AGG | + | chr8_1:6660996-6661015 | Msa1175350:intron | 30.0% | |
| ACATGCACTTAATAAATAGG+AGG | + | chr8_1:6660999-6661018 | Msa1175350:intron | 30.0% | |
| ATTGCAATCTAATGTTACCA+AGG | + | chr8_1:6661173-6661192 | Msa1175350:intron | 30.0% | |
| AATACTAAGCCAAAACATGA+AGG | - | chr8_1:6661223-6661242 | None:intergenic | 30.0% | |
| ! | AATTATTGCTGAGGCAATTT+TGG | - | chr8_1:6661274-6661293 | None:intergenic | 30.0% |
| TTAAGGAGAAATTATTGCTG+AGG | - | chr8_1:6661283-6661302 | None:intergenic | 30.0% | |
| TTAACTTCAATGTGAAACGA+GGG | - | chr8_1:6661322-6661341 | None:intergenic | 30.0% | |
| ! | TTTAACTTCAATGTGAAACG+AGG | - | chr8_1:6661323-6661342 | None:intergenic | 30.0% |
| TAAAAGTGGAGAATATGAGT+GGG | + | chr8_1:6661370-6661389 | Msa1175350:CDS | 30.0% | |
| ATCAATGTTGTGTACAAAGA+TGG | - | chr8_1:6661706-6661725 | None:intergenic | 30.0% | |
| AGAGAAGAAGAAAAGGATTG+AGG | - | chr8_1:6655809-6655828 | None:intergenic | 35.0% | |
| TTCCAAGAGAAAAACCAGAA+CGG | + | chr8_1:6655918-6655937 | Msa1175350:CDS | 35.0% | |
| TGTTCTTAATCATCGAAGGA+CGG | - | chr8_1:6655972-6655991 | None:intergenic | 35.0% | |
| GTTAAAAGAGCTATTGAGCT+CGG | + | chr8_1:6656078-6656097 | Msa1175350:CDS | 35.0% | |
| CGAAGACGATTGAAAATACA+AGG | + | chr8_1:6656219-6656238 | Msa1175350:CDS | 35.0% | |
| TTCCTTAACTAGTGCTCTAA+GGG | - | chr8_1:6656766-6656785 | None:intergenic | 35.0% | |
| TTTCCTTAACTAGTGCTCTA+AGG | - | chr8_1:6656767-6656786 | None:intergenic | 35.0% | |
| !! | AACTTAGTTTGTAGTTGGCT+CGG | + | chr8_1:6656785-6656804 | Msa1175350:intron | 35.0% |
| AAACGCATGACTAAATTGTG+TGG | - | chr8_1:6656827-6656846 | None:intergenic | 35.0% | |
| ! | AGAAAATTCGAAAGGGGTTT+TGG | + | chr8_1:6656880-6656899 | Msa1175350:intron | 35.0% |
| TCGTATGCCATATGACAATT+TGG | + | chr8_1:6656904-6656923 | Msa1175350:intron | 35.0% | |
| CGTATGCCATATGACAATTT+GGG | + | chr8_1:6656905-6656924 | Msa1175350:intron | 35.0% | |
| ! | GATAGTTGATGCTAATGAGA+TGG | + | chr8_1:6656972-6656991 | Msa1175350:intron | 35.0% |
| !! | TCATCATTTTTCTTGCCTTC+TGG | + | chr8_1:6657139-6657158 | Msa1175350:intron | 35.0% |
| TTGCTTAAAGAATGCACGTA+GGG | + | chr8_1:6657475-6657494 | Msa1175350:intron | 35.0% | |
| ATTTACACAAAGCTTAAGGG+AGG | - | chr8_1:6657614-6657633 | None:intergenic | 35.0% | |
| TGTCATGTGAGAAAATAGAG+AGG | - | chr8_1:6657648-6657667 | None:intergenic | 35.0% | |
| AGTATTGCAAGATGCTTTCA+TGG | - | chr8_1:6657774-6657793 | None:intergenic | 35.0% | |
| ATCTGAATCAACATGTGGAT+AGG | - | chr8_1:6657892-6657911 | None:intergenic | 35.0% | |
| ! | TATACTCTGCAACGGTTTTA+TGG | + | chr8_1:6657984-6658003 | Msa1175350:intron | 35.0% |
| !! | ATACTCTGCAACGGTTTTAT+GGG | + | chr8_1:6657985-6658004 | Msa1175350:intron | 35.0% |
| ACAGTAGTGTTAAGTCACAA+AGG | + | chr8_1:6658219-6658238 | Msa1175350:intron | 35.0% | |
| CAGTAGTGTTAAGTCACAAA+GGG | + | chr8_1:6658220-6658239 | Msa1175350:intron | 35.0% | |
| !! | AACTTTAGAGTGTAAAGTGC+AGG | - | chr8_1:6658377-6658396 | None:intergenic | 35.0% |
| TCCTTTAAGCTTAAAGGGAT+GGG | - | chr8_1:6658408-6658427 | None:intergenic | 35.0% | |
| TTCCTTTAAGCTTAAAGGGA+TGG | - | chr8_1:6658409-6658428 | None:intergenic | 35.0% | |
| ! | AGAATTACTCTTGTTTCGTG+TGG | - | chr8_1:6658463-6658482 | None:intergenic | 35.0% |
| CACGAAACAAGAGTAATTCT+TGG | + | chr8_1:6658463-6658482 | Msa1175350:intron | 35.0% | |
| ATTTGTTTGCAGCTATTTGC+TGG | + | chr8_1:6658598-6658617 | Msa1175350:intron | 35.0% | |
| GCAAGTGGTGATTAATATCT+TGG | - | chr8_1:6658671-6658690 | None:intergenic | 35.0% | |
| AACATACCGTAGAATTGAAG+CGG | - | chr8_1:6658693-6658712 | None:intergenic | 35.0% | |
| GAATACAAACAACAGACTAG+AGG | - | chr8_1:6658717-6658736 | None:intergenic | 35.0% | |
| CAAATCAAATCAAGAAGGCA+AGG | - | chr8_1:6658778-6658797 | None:intergenic | 35.0% | |
| ! | CTTGCCTTCTTGATTTGATT+TGG | + | chr8_1:6658776-6658795 | Msa1175350:intron | 35.0% |
| ! | GCGTCCTATTTTACACTTTT+AGG | + | chr8_1:6658798-6658817 | Msa1175350:intron | 35.0% |
| GTCAAAAATCAACAGACAGA+TGG | - | chr8_1:6658874-6658893 | None:intergenic | 35.0% | |
| !!! | ATTTTTGACTTCATCTGCAG+AGG | + | chr8_1:6658885-6658904 | Msa1175350:intron | 35.0% |
| !!! | TTTTTGACTTCATCTGCAGA+GGG | + | chr8_1:6658886-6658905 | Msa1175350:intron | 35.0% |
| CTCTTGAAGTAATGTGCATT+TGG | - | chr8_1:6658947-6658966 | None:intergenic | 35.0% | |
| AATGCACATTACTTCAAGAG+AGG | + | chr8_1:6658947-6658966 | Msa1175350:CDS | 35.0% | |
| TTGTAGTTGTACACACCAAT+CGG | + | chr8_1:6659124-6659143 | Msa1175350:CDS | 35.0% | |
| AAATAGGTAAGACAAAGTGC+AGG | - | chr8_1:6659612-6659631 | None:intergenic | 35.0% | |
| TGTTATCTGGAAAGATCAAG+TGG | + | chr8_1:6659660-6659679 | Msa1175350:intron | 35.0% | |
| GTCTAAAGGTAAAAATGACG+AGG | + | chr8_1:6660397-6660416 | Msa1175350:CDS | 35.0% | |
| AAAGGTAAAAATGACGAGGA+TGG | + | chr8_1:6660401-6660420 | Msa1175350:CDS | 35.0% | |
| CCATTGAGTTTGAAAATGGA+AGG | - | chr8_1:6660504-6660523 | None:intergenic | 35.0% | |
| ! | CCTTCCATTTTCAAACTCAA+TGG | + | chr8_1:6660501-6660520 | Msa1175350:intron | 35.0% |
| ATGGCCATTGAGTTTGAAAA+TGG | - | chr8_1:6660508-6660527 | None:intergenic | 35.0% | |
| GAGTTATAATGGCAAGAAAG+AGG | - | chr8_1:6660806-6660825 | None:intergenic | 35.0% | |
| TTCTTGCCATTATAACTCAG+TGG | + | chr8_1:6660808-6660827 | Msa1175350:intron | 35.0% | |
| AGTCTACCACTGAGTTATAA+TGG | - | chr8_1:6660817-6660836 | None:intergenic | 35.0% | |
| ATTATAACTCAGTGGTAGAC+TGG | + | chr8_1:6660816-6660835 | Msa1175350:intron | 35.0% | |
| !!! | TTTTGGAATTTCAGAGTTGC+AGG | - | chr8_1:6660879-6660898 | None:intergenic | 35.0% |
| ! | TACCTGATTCCTTCATGTTT+TGG | + | chr8_1:6661211-6661230 | Msa1175350:intron | 35.0% |
| TCCTTAAAAATGCAGGAATG+CGG | + | chr8_1:6661296-6661315 | Msa1175350:intron | 35.0% | |
| GGAACATTTGACACTAAAAG+TGG | + | chr8_1:6661356-6661375 | Msa1175350:CDS | 35.0% | |
| CTAAAAGTGGAGAATATGAG+TGG | + | chr8_1:6661369-6661388 | Msa1175350:CDS | 35.0% | |
| ! | TGTCTTCTTTTCCTTTTAGC+CGG | + | chr8_1:6661499-6661518 | Msa1175350:intron | 35.0% |
| AAATGCAAAGTTCCAAGACA+AGG | - | chr8_1:6661560-6661579 | None:intergenic | 35.0% | |
| ! | TGTCTTGGAACTTTGCATTT+TGG | + | chr8_1:6661560-6661579 | Msa1175350:three_prime_UTR | 35.0% |
| ATGTTGTGTACAAAGATGGT+AGG | - | chr8_1:6661702-6661721 | None:intergenic | 35.0% | |
| TCATTTGTGACGAATTTAGG+TGG | + | chr8_1:6661871-6661890 | Msa1175350:three_prime_UTR | 35.0% | |
| CATTTGTGACGAATTTAGGT+GGG | + | chr8_1:6661872-6661891 | Msa1175350:three_prime_UTR | 35.0% | |
| GTTATTCCTACAATGGCGAT+CGG | + | chr8_1:6655850-6655869 | Msa1175350:exon | 40.0% | |
| AAGCGCAACAATGATTCAGA+CGG | + | chr8_1:6655883-6655902 | Msa1175350:CDS | 40.0% | |
| !!! | TTCCGTTCTGGTTTTTCTCT+TGG | - | chr8_1:6655923-6655942 | None:intergenic | 40.0% |
| AACCAGAACGGAAACAGAAA+CGG | + | chr8_1:6655930-6655949 | Msa1175350:CDS | 40.0% | |
| TTAATCATCGAAGGACGGAA+CGG | - | chr8_1:6655967-6655986 | None:intergenic | 40.0% | |
| CTTCTTCTGATGCTTAAGCT+TGG | - | chr8_1:6656019-6656038 | None:intergenic | 40.0% | |
| TGAAAAACGCGCTAAGTCTA+AGG | + | chr8_1:6656041-6656060 | Msa1175350:CDS | 40.0% | |
| AACTCAACCTCTTCATCATC+AGG | - | chr8_1:6656269-6656288 | None:intergenic | 40.0% | |
| ! | ATCAGCTTCAAGTTTGTCAG+TGG | - | chr8_1:6656541-6656560 | None:intergenic | 40.0% |
| CAACAGTTAGAGCAACTGTT+AGG | + | chr8_1:6656708-6656727 | Msa1175350:intron | 40.0% | |
| AGCCGAGAAGAAAATTCGAA+AGG | + | chr8_1:6656872-6656891 | Msa1175350:intron | 40.0% | |
| GCCGAGAAGAAAATTCGAAA+GGG | + | chr8_1:6656873-6656892 | Msa1175350:intron | 40.0% | |
| ! | CCCCTTTCGAATTTTCTTCT+CGG | - | chr8_1:6656877-6656896 | None:intergenic | 40.0% |
| CCGAGAAGAAAATTCGAAAG+GGG | + | chr8_1:6656874-6656893 | Msa1175350:intron | 40.0% | |
| CTTTGTGTGTGTTGGATTGT+TGG | + | chr8_1:6657231-6657250 | Msa1175350:intron | 40.0% | |
| CTTGCTTAAAGAATGCACGT+AGG | + | chr8_1:6657474-6657493 | Msa1175350:intron | 40.0% | |
| ATTGCAAGATGCTTTCATGG+TGG | - | chr8_1:6657771-6657790 | None:intergenic | 40.0% | |
| AGAAACACACCAGTAAGGAA+TGG | - | chr8_1:6657835-6657854 | None:intergenic | 40.0% | |
| TCACTAGAAACACACCAGTA+AGG | - | chr8_1:6657840-6657859 | None:intergenic | 40.0% | |
| AATCAACATGTGGATAGGAG+CGG | - | chr8_1:6657887-6657906 | None:intergenic | 40.0% | |
| !! | TACTCTGCAACGGTTTTATG+GGG | + | chr8_1:6657986-6658005 | Msa1175350:intron | 40.0% |
| ! | CGCTGCCATCATTATTTTCA+AGG | - | chr8_1:6658073-6658092 | None:intergenic | 40.0% |
| TAGTGTTAAGTCACAAAGGG+AGG | + | chr8_1:6658223-6658242 | Msa1175350:intron | 40.0% | |
| ACCCATCCCTTTAAGCTTAA+AGG | + | chr8_1:6658404-6658423 | Msa1175350:intron | 40.0% | |
| GACGCCAAATCAAATCAAGA+AGG | - | chr8_1:6658783-6658802 | None:intergenic | 40.0% | |
| !!! | TTTTGACTTCATCTGCAGAG+GGG | + | chr8_1:6658887-6658906 | Msa1175350:intron | 40.0% |
| TCACTATCTCTTTCACTGTG+TGG | + | chr8_1:6659001-6659020 | Msa1175350:intron | 40.0% | |
| TGAGTAGGATCTTCACTCAA+AGG | - | chr8_1:6659170-6659189 | None:intergenic | 40.0% | |
| GCGTCTGAAAAAAAGAAGCA+AGG | - | chr8_1:6659233-6659252 | None:intergenic | 40.0% | |
| !! | TTGATTGTTGGCTTACCTGA+AGG | + | chr8_1:6659257-6659276 | Msa1175350:CDS | 40.0% |
| ! | GTGAGTTTGAAATGAGCAGT+AGG | - | chr8_1:6659284-6659303 | None:intergenic | 40.0% |
| TCTGATCTCCTCATTGATGT+CGG | + | chr8_1:6659378-6659397 | Msa1175350:intron | 40.0% | |
| AATGTACACCGACATCAATG+AGG | - | chr8_1:6659389-6659408 | None:intergenic | 40.0% | |
| AAGTTGTTCAACACAAGCTC+AGG | - | chr8_1:6659794-6659813 | None:intergenic | 40.0% | |
| AAATGTGATATGCCCATGCT+AGG | + | chr8_1:6659929-6659948 | Msa1175350:intron | 40.0% | |
| ATTTCAGTCAGACCTAGCAT+GGG | - | chr8_1:6659944-6659963 | None:intergenic | 40.0% | |
| TATTTCAGTCAGACCTAGCA+TGG | - | chr8_1:6659945-6659964 | None:intergenic | 40.0% | |
| ATAGAAACACTGTGAACCAG+AGG | - | chr8_1:6660089-6660108 | None:intergenic | 40.0% | |
| AGAGAGACTTCGTATTCTTC+CGG | + | chr8_1:6660246-6660265 | Msa1175350:CDS | 40.0% | |
| ! | AAGAATTGTACCGATGATGC+CGG | - | chr8_1:6660268-6660287 | None:intergenic | 40.0% |
| ATGTGTCCAATCACGTTCTT+AGG | + | chr8_1:6660339-6660358 | Msa1175350:intron | 40.0% | |
| !! | GAAGACGGGCAATTGTTTTA+TGG | - | chr8_1:6660448-6660467 | None:intergenic | 40.0% |
| TAAAACAATTGCCCGTCTTC+AGG | + | chr8_1:6660448-6660467 | Msa1175350:CDS | 40.0% | |
| AATTGACACCAACCTGAAGA+CGG | - | chr8_1:6660463-6660482 | None:intergenic | 40.0% | |
| GACTTGCGTTGAAAGTAGAT+AGG | + | chr8_1:6660733-6660752 | Msa1175350:intron | 40.0% | |
| CTTAATGACTAACAAAGGGG+AGG | - | chr8_1:6660941-6660960 | None:intergenic | 40.0% | |
| TTAAGTGCATGTGAGGATTG+AGG | - | chr8_1:6660991-6661010 | None:intergenic | 40.0% | |
| AGCCAAAACATGAAGGAATC+AGG | - | chr8_1:6661216-6661235 | None:intergenic | 40.0% | |
| AAGTTAAAAAGCCTGCAGCA+TGG | + | chr8_1:6661335-6661354 | Msa1175350:CDS | 40.0% | |
| ! | AGAATATGAGTGGGTTCACA+AGG | + | chr8_1:6661379-6661398 | Msa1175350:CDS | 40.0% |
| ! | CTTTTCCTTTTAGCCGGAAA+TGG | + | chr8_1:6661505-6661524 | Msa1175350:intron | 40.0% |
| ! | TTTTTCCTGTGACCTTGTCT+TGG | + | chr8_1:6661545-6661564 | Msa1175350:exon | 40.0% |
| ! | ATTTTGGACTGCATTTCAGC+TGG | + | chr8_1:6661576-6661595 | Msa1175350:three_prime_UTR | 40.0% |
| TTCCGTTTCTGTTTCCGTTC+TGG | - | chr8_1:6655935-6655954 | None:intergenic | 45.0% | |
| GGAAACAGAAACGGAAACGA+AGG | + | chr8_1:6655939-6655958 | Msa1175350:CDS | 45.0% | |
| TAATCATCGAAGGACGGAAC+GGG | - | chr8_1:6655966-6655985 | None:intergenic | 45.0% | |
| ! | TTGTGTGTTGTTGTAGCCTC+CGG | + | chr8_1:6656184-6656203 | Msa1175350:intron | 45.0% |
| ! | TTGCAAGCCTGATGATGAAG+AGG | + | chr8_1:6656259-6656278 | Msa1175350:CDS | 45.0% |
| ! | TGCCCTTAGAGCACTAGTTA+AGG | + | chr8_1:6656761-6656780 | Msa1175350:intron | 45.0% |
| !!! | TAGTTGGCTCGGTTTTGCAT+TGG | + | chr8_1:6656796-6656815 | Msa1175350:intron | 45.0% |
| GATGCTAATGAGATGGTCGA+TGG | + | chr8_1:6656979-6656998 | Msa1175350:intron | 45.0% | |
| GCTATGATGACTCGTGCAAA+CGG | - | chr8_1:6657097-6657116 | None:intergenic | 45.0% | |
| TGTGTGTGTTGGATTGTTGG+TGG | + | chr8_1:6657234-6657253 | Msa1175350:intron | 45.0% | |
| GTGTGTGTTGGATTGTTGGT+GGG | + | chr8_1:6657235-6657254 | Msa1175350:intron | 45.0% | |
| TGTGTGTTGGATTGTTGGTG+GGG | + | chr8_1:6657236-6657255 | Msa1175350:intron | 45.0% | |
| ! | TTCATGGTGGAAGAGAGTGT+GGG | - | chr8_1:6657758-6657777 | None:intergenic | 45.0% |
| ! | TTTCATGGTGGAAGAGAGTG+TGG | - | chr8_1:6657759-6657778 | None:intergenic | 45.0% |
| CGTGTGTTTCCATTCCTTAC+TGG | + | chr8_1:6657823-6657842 | Msa1175350:intron | 45.0% | |
| GCGTTAAGATATCTTAGGGG+AGG | + | chr8_1:6658311-6658330 | Msa1175350:intron | 45.0% | |
| AAGCTTAAAGGGATGGGTGA+AGG | - | chr8_1:6658402-6658421 | None:intergenic | 45.0% | |
| ! | CACTTGCCGCTTCAATTCTA+CGG | + | chr8_1:6658684-6658703 | Msa1175350:CDS | 45.0% |
| TAGTTGTACACACCAATCGG+AGG | + | chr8_1:6659127-6659146 | Msa1175350:CDS | 45.0% | |
| AGTTGTACACACCAATCGGA+GGG | + | chr8_1:6659128-6659147 | Msa1175350:CDS | 45.0% | |
| TCAGACGCTCTCTTGATTGT+TGG | + | chr8_1:6659245-6659264 | Msa1175350:intron | 45.0% | |
| AAATGAGCAGTAGGTCCTTC+AGG | - | chr8_1:6659275-6659294 | None:intergenic | 45.0% | |
| AACAACTTCACAACACGCCT+AGG | + | chr8_1:6659806-6659825 | Msa1175350:CDS | 45.0% | |
| ACAACTTCACAACACGCCTA+GGG | + | chr8_1:6659807-6659826 | Msa1175350:CDS | 45.0% | |
| CTTTAAACTCGGGATCTTGG+GGG | - | chr8_1:6660199-6660218 | None:intergenic | 45.0% | |
| CCTTTAAACTCGGGATCTTG+GGG | - | chr8_1:6660200-6660219 | None:intergenic | 45.0% | |
| CCCTTTAAACTCGGGATCTT+GGG | - | chr8_1:6660201-6660220 | None:intergenic | 45.0% | |
| CCCAAGATCCCGAGTTTAAA+GGG | + | chr8_1:6660198-6660217 | Msa1175350:CDS | 45.0% | |
| TACACGTCGCCCTTTAAACT+CGG | - | chr8_1:6660210-6660229 | None:intergenic | 45.0% | |
| ATACGAAGTCTCTCTGGTTG+TGG | - | chr8_1:6660241-6660260 | None:intergenic | 45.0% | |
| GGAAGAATACGAAGTCTCTC+TGG | - | chr8_1:6660247-6660266 | None:intergenic | 45.0% | |
| TCGTATTCTTCCGGCATCAT+CGG | + | chr8_1:6660255-6660274 | Msa1175350:CDS | 45.0% | |
| !! | CGGGCAATTGTTTTATGGTC+AGG | - | chr8_1:6660443-6660462 | None:intergenic | 45.0% |
| ATTGACACCAACCTGAAGAC+GGG | - | chr8_1:6660462-6660481 | None:intergenic | 45.0% | |
| TTGCAGGTACTCAAAACCTG+AGG | - | chr8_1:6660863-6660882 | None:intergenic | 45.0% | |
| TCTTCTGCGGCAGTATTGTT+AGG | - | chr8_1:6661028-6661047 | None:intergenic | 45.0% | |
| GACCAATCCTTCCAACATGA+CGG | - | chr8_1:6661060-6661079 | None:intergenic | 45.0% | |
| ! | GCCGCATTCCTGCATTTTTA+AGG | - | chr8_1:6661300-6661319 | None:intergenic | 45.0% |
| TGTCAAATGTTCCATGCTGC+AGG | - | chr8_1:6661349-6661368 | None:intergenic | 45.0% | |
| TGTGTCCATTTCCGGCTAAA+AGG | - | chr8_1:6661513-6661532 | None:intergenic | 45.0% | |
| ! | CTTCGACTTGTGTCCATTTC+CGG | - | chr8_1:6661521-6661540 | None:intergenic | 45.0% |
| AAATGGACACAAGTCGAAGG+AGG | + | chr8_1:6661522-6661541 | Msa1175350:CDS | 45.0% | |
| AAGTTCCAAGACAAGGTCAC+AGG | - | chr8_1:6661553-6661572 | None:intergenic | 45.0% | |
| ACTGCATTTCAGCTGGAACT+TGG | + | chr8_1:6661583-6661602 | Msa1175350:three_prime_UTR | 45.0% | |
| CAGCTGGAACTTGGTTAATC+TGG | + | chr8_1:6661592-6661611 | Msa1175350:three_prime_UTR | 45.0% | |
| !!! | TTTTTTTTTTTTTTTTTTAC+AGG | - | chr8_1:6659501-6659520 | None:intergenic | 5.0% |
| !!! | TTTTGTATTTTAATTTATTA+TGG | + | chr8_1:6661667-6661686 | Msa1175350:three_prime_UTR | 5.0% |
| CGCGGTGGTTATTCCTACAA+TGG | + | chr8_1:6655843-6655862 | Msa1175350:exon | 50.0% | |
| ATTCCTACAATGGCGATCGG+TGG | + | chr8_1:6655853-6655872 | Msa1175350:exon | 50.0% | |
| TTTCCACCGATCGCCATTGT+AGG | - | chr8_1:6655859-6655878 | None:intergenic | 50.0% | |
| GGTCGATGGAGATGTAGTCT+TGG | + | chr8_1:6656993-6657012 | Msa1175350:intron | 50.0% | |
| ATAGCTGTTGTGTGAGCTGC+AGG | + | chr8_1:6657112-6657131 | Msa1175350:intron | 50.0% | |
| ! | GTGTGTTGGATTGTTGGTGG+GGG | + | chr8_1:6657237-6657256 | Msa1175350:intron | 50.0% |
| ! | TGTGTTGGATTGTTGGTGGG+GGG | + | chr8_1:6657238-6657257 | Msa1175350:intron | 50.0% |
| ! | CTGATTTGTGCGCGCATGAA+CGG | + | chr8_1:6657341-6657360 | Msa1175350:intron | 50.0% |
| CTAGACTGCTCTAACAGCAG+AGG | - | chr8_1:6657678-6657697 | None:intergenic | 50.0% | |
| TGATGGCAGCGCTAGACATT+TGG | + | chr8_1:6658082-6658101 | Msa1175350:intron | 50.0% | |
| GATGGCAGCGCTAGACATTT+GGG | + | chr8_1:6658083-6658102 | Msa1175350:intron | 50.0% | |
| ATGGCAGCGCTAGACATTTG+GGG | + | chr8_1:6658084-6658103 | Msa1175350:intron | 50.0% | |
| CGTAGAATTGAAGCGGCAAG+TGG | - | chr8_1:6658686-6658705 | None:intergenic | 50.0% | |
| AGGAGTAAGAGTCGAGTTCG+AGG | + | chr8_1:6658818-6658837 | Msa1175350:intron | 50.0% | |
| !! | ACTCAAAGGCACCACCTACT+TGG | - | chr8_1:6659156-6659175 | None:intergenic | 50.0% |
| TGTGTCCCCTTGCAGAATCA+TGG | + | chr8_1:6659749-6659768 | Msa1175350:intron | 50.0% | |
| GGACTCCATGATTCTGCAAG+GGG | - | chr8_1:6659757-6659776 | None:intergenic | 50.0% | |
| GGGACTCCATGATTCTGCAA+GGG | - | chr8_1:6659758-6659777 | None:intergenic | 50.0% | |
| TGGGACTCCATGATTCTGCA+AGG | - | chr8_1:6659759-6659778 | None:intergenic | 50.0% | |
| TGTTCAACACAAGCTCAGGC+TGG | - | chr8_1:6659790-6659809 | None:intergenic | 50.0% | |
| CCCCAAGATCCCGAGTTTAA+AGG | + | chr8_1:6660197-6660216 | Msa1175350:CDS | 50.0% | |
| GCCCTTTAAACTCGGGATCT+TGG | - | chr8_1:6660202-6660221 | None:intergenic | 50.0% | |
| ACACGTCGCCCTTTAAACTC+GGG | - | chr8_1:6660209-6660228 | None:intergenic | 50.0% | |
| GAAGTCTCTCTGGTTGTGGA+AGG | - | chr8_1:6660237-6660256 | None:intergenic | 50.0% | |
| ACAATTGCCCGTCTTCAGGT+TGG | + | chr8_1:6660452-6660471 | Msa1175350:intron | 50.0% | |
| CAGTGGTAGACTGGTAGTCT+TGG | + | chr8_1:6660825-6660844 | Msa1175350:intron | 50.0% | |
| ! | TGGTAGACTGGTAGTCTTGG+TGG | + | chr8_1:6660828-6660847 | Msa1175350:intron | 50.0% |
| ! | TTGGTGGATGCAGTATCCTC+AGG | + | chr8_1:6660844-6660863 | Msa1175350:intron | 50.0% |
| ATGACTAACAAAGGGGAGGC+TGG | - | chr8_1:6660937-6660956 | None:intergenic | 50.0% | |
| TGCATGTGAGGATTGAGGAG+GGG | - | chr8_1:6660986-6661005 | None:intergenic | 50.0% | |
| GTGCATGTGAGGATTGAGGA+GGG | - | chr8_1:6660987-6661006 | None:intergenic | 50.0% | |
| AGTGCATGTGAGGATTGAGG+AGG | - | chr8_1:6660988-6661007 | None:intergenic | 50.0% | |
| ATCCTTCCAACATGACGGCA+AGG | - | chr8_1:6661055-6661074 | None:intergenic | 50.0% | |
| TGCCGTCATGTTGGAAGGAT+TGG | + | chr8_1:6661055-6661074 | Msa1175350:intron | 50.0% | |
| CGGAAATGGACACAAGTCGA+AGG | + | chr8_1:6661519-6661538 | Msa1175350:CDS | 50.0% | |
| CTCTTCGAAAAACCCTCGCG+CGG | + | chr8_1:6655825-6655844 | Msa1175350:five_prime_UTR | 55.0% | |
| TAGGAATAACCACCGCGCGA+GGG | - | chr8_1:6655840-6655859 | None:intergenic | 55.0% | |
| CAATGGCGATCGGTGGAAAG+AGG | + | chr8_1:6655860-6655879 | Msa1175350:exon | 55.0% | |
| AGCTATTGAGCTCGGCGAAG+AGG | + | chr8_1:6656086-6656105 | Msa1175350:CDS | 55.0% | |
| GTTGTAGCCTCCGGAGAAGA+AGG | + | chr8_1:6656193-6656212 | Msa1175350:intron | 55.0% | |
| GTCTTCGGCACCTTCTTCTC+CGG | - | chr8_1:6656206-6656225 | None:intergenic | 55.0% | |
| !! | TGATGCTAGGTGTCGCTCAG+AGG | + | chr8_1:6656443-6656462 | Msa1175350:intron | 55.0% |
| CTGTTGTGTGAGCTGCAGGT+CGG | + | chr8_1:6657116-6657135 | Msa1175350:intron | 55.0% | |
| ! | TTGTTGGTGGGGGGATCTGT+TGG | + | chr8_1:6657247-6657266 | Msa1175350:intron | 55.0% |
| GGGGGATCTGTTGGATACAG+CGG | + | chr8_1:6657256-6657275 | Msa1175350:intron | 55.0% | |
| GACTGCTCTAACAGCAGAGG+AGG | - | chr8_1:6657675-6657694 | None:intergenic | 55.0% | |
| TGGCAGCGCTAGACATTTGG+GGG | + | chr8_1:6658085-6658104 | Msa1175350:intron | 55.0% | |
| CCTACTTGGTTCCCTCCGAT+TGG | - | chr8_1:6659142-6659161 | None:intergenic | 55.0% | |
| CCAATCGGAGGGAACCAAGT+AGG | + | chr8_1:6659139-6659158 | Msa1175350:intron | 55.0% | |
| ATCGGAGGGAACCAAGTAGG+TGG | + | chr8_1:6659142-6659161 | Msa1175350:intron | 55.0% | |
| ACCTTCCAACTCGATGCCCT+AGG | - | chr8_1:6659826-6659845 | None:intergenic | 55.0% | |
| ACAAAGGGGAGGCTGGAAGA+TGG | - | chr8_1:6660930-6660949 | None:intergenic | 55.0% | |
| TGCCTTGCCGTCATGTTGGA+AGG | + | chr8_1:6661050-6661069 | Msa1175350:intron | 55.0% | |
| TTCGAAAAACCCTCGCGCGG+TGG | + | chr8_1:6655828-6655847 | Msa1175350:five_prime_UTR | 60.0% | |
| GTAGGAATAACCACCGCGCG+AGG | - | chr8_1:6655841-6655860 | None:intergenic | 60.0% | |
| TTCGGCACCTTCTTCTCCGG+AGG | - | chr8_1:6656203-6656222 | None:intergenic | 60.0% | |
| !! | CTAGGTGTCGCTCAGAGGCA+CGG | + | chr8_1:6656448-6656467 | Msa1175350:intron | 60.0% |
| !! | TAGGTGTCGCTCAGAGGCAC+GGG | + | chr8_1:6656449-6656468 | Msa1175350:intron | 60.0% |
| CTTGCCTTCTGGTCTGCCTC+TGG | + | chr8_1:6657150-6657169 | Msa1175350:intron | 60.0% | |
| TGCACCAGAGGCAGACCAGA+AGG | - | chr8_1:6657157-6657176 | None:intergenic | 60.0% | |
| CAGCAGTACCACTGCACCAG+AGG | - | chr8_1:6657169-6657188 | None:intergenic | 60.0% | |
| ! | GCTCAGGCTGGTGACTGGTT+GGG | - | chr8_1:6659778-6659797 | None:intergenic | 60.0% |
| AGCTCAGGCTGGTGACTGGT+TGG | - | chr8_1:6659779-6659798 | None:intergenic | 60.0% | |
| CACAAGCTCAGGCTGGTGAC+TGG | - | chr8_1:6659783-6659802 | None:intergenic | 60.0% | |
| !! | ACACGCCTAGGGCATCGAGT+TGG | + | chr8_1:6659818-6659837 | Msa1175350:CDS | 60.0% |
| !! | GCCTAGGGCATCGAGTTGGA+AGG | + | chr8_1:6659822-6659841 | Msa1175350:CDS | 60.0% |
| ACGGCAAGGCAGCTCTTCTG+CGG | - | chr8_1:6661041-6661060 | None:intergenic | 60.0% | |
| GAGCTGCCTTGCCGTCATGT+TGG | + | chr8_1:6661046-6661065 | Msa1175350:intron | 60.0% | |
| CTGGTCTGCCTCTGGTGCAG+TGG | + | chr8_1:6657158-6657177 | Msa1175350:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_1 | gene | 6655795 | 6661932 | 6655795 | ID=Msa1175350;Name=Msa1175350 |
| chr8_1 | mRNA | 6655795 | 6661932 | 6655795 | ID=Msa1175350-mRNA-1;Parent=Msa1175350;Name=Msa1175350-mRNA-1;_AED=0.07;_eAED=0.07;_QI=67|1|1|1|0.9|0.90|11|376|358 |
| chr8_1 | exon | 6655795 | 6656107 | 6655795 | ID=Msa1175350-mRNA-1:exon:2348;Parent=Msa1175350-mRNA-1 |
| chr8_1 | exon | 6656200 | 6656280 | 6656200 | ID=Msa1175350-mRNA-1:exon:2349;Parent=Msa1175350-mRNA-1 |
| chr8_1 | exon | 6658610 | 6658705 | 6658610 | ID=Msa1175350-mRNA-1:exon:2350;Parent=Msa1175350-mRNA-1 |
| chr8_1 | exon | 6658905 | 6658988 | 6658905 | ID=Msa1175350-mRNA-1:exon:2351;Parent=Msa1175350-mRNA-1 |
| chr8_1 | exon | 6659087 | 6659156 | 6659087 | ID=Msa1175350-mRNA-1:exon:2352;Parent=Msa1175350-mRNA-1 |
| chr8_1 | exon | 6659249 | 6659331 | 6659249 | ID=Msa1175350-mRNA-1:exon:2353;Parent=Msa1175350-mRNA-1 |
| chr8_1 | exon | 6659764 | 6659843 | 6659764 | ID=Msa1175350-mRNA-1:exon:2354;Parent=Msa1175350-mRNA-1 |
| chr8_1 | exon | 6660178 | 6660276 | 6660178 | ID=Msa1175350-mRNA-1:exon:2355;Parent=Msa1175350-mRNA-1 |
| chr8_1 | exon | 6660361 | 6660469 | 6660361 | ID=Msa1175350-mRNA-1:exon:2356;Parent=Msa1175350-mRNA-1 |
| chr8_1 | exon | 6661311 | 6661400 | 6661311 | ID=Msa1175350-mRNA-1:exon:2357;Parent=Msa1175350-mRNA-1 |
| chr8_1 | exon | 6661518 | 6661932 | 6661518 | ID=Msa1175350-mRNA-1:exon:2358;Parent=Msa1175350-mRNA-1 |
| chr8_1 | five_prime_UTR | 6655795 | 6655861 | 6655795 | ID=Msa1175350-mRNA-1:five_prime_utr;Parent=Msa1175350-mRNA-1 |
| chr8_1 | CDS | 6655862 | 6656107 | 6655862 | ID=Msa1175350-mRNA-1:cds;Parent=Msa1175350-mRNA-1 |
| chr8_1 | CDS | 6656200 | 6656280 | 6656200 | ID=Msa1175350-mRNA-1:cds;Parent=Msa1175350-mRNA-1 |
| chr8_1 | CDS | 6658610 | 6658705 | 6658610 | ID=Msa1175350-mRNA-1:cds;Parent=Msa1175350-mRNA-1 |
| chr8_1 | CDS | 6658905 | 6658988 | 6658905 | ID=Msa1175350-mRNA-1:cds;Parent=Msa1175350-mRNA-1 |
| chr8_1 | CDS | 6659087 | 6659156 | 6659087 | ID=Msa1175350-mRNA-1:cds;Parent=Msa1175350-mRNA-1 |
| chr8_1 | CDS | 6659249 | 6659331 | 6659249 | ID=Msa1175350-mRNA-1:cds;Parent=Msa1175350-mRNA-1 |
| chr8_1 | CDS | 6659764 | 6659843 | 6659764 | ID=Msa1175350-mRNA-1:cds;Parent=Msa1175350-mRNA-1 |
| chr8_1 | CDS | 6660178 | 6660276 | 6660178 | ID=Msa1175350-mRNA-1:cds;Parent=Msa1175350-mRNA-1 |
| chr8_1 | CDS | 6660361 | 6660469 | 6660361 | ID=Msa1175350-mRNA-1:cds;Parent=Msa1175350-mRNA-1 |
| chr8_1 | CDS | 6661311 | 6661400 | 6661311 | ID=Msa1175350-mRNA-1:cds;Parent=Msa1175350-mRNA-1 |
| chr8_1 | CDS | 6661518 | 6661556 | 6661518 | ID=Msa1175350-mRNA-1:cds;Parent=Msa1175350-mRNA-1 |
| chr8_1 | three_prime_UTR | 6661557 | 6661932 | 6661557 | ID=Msa1175350-mRNA-1:three_prime_utr;Parent=Msa1175350-mRNA-1 |
| Gene Sequence |
| Protein sequence |
