Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0341480 | XP_013465590.1 | 98.655 | 223 | 3 | 0 | 1 | 223 | 1 | 223 | 2.64e-158 | 447 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0341480 | sp|Q9LMP7|GOS11_ARATH | 79.452 | 219 | 44 | 1 | 5 | 223 | 6 | 223 | 9.17e-124 | 352 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0001830 | Msa0341480 | 0.810780 | 9.720498e-51 | -8.615850e-47 |
| Msa0032470 | Msa0341480 | 0.813137 | 2.980529e-51 | -8.615850e-47 |
| Msa0071250 | Msa0341480 | 0.801505 | 8.725624e-49 | -8.615850e-47 |
| Msa0077370 | Msa0341480 | 0.832883 | 7.330091e-56 | -8.615850e-47 |
| Msa0117520 | Msa0341480 | 0.800767 | 1.234926e-48 | -8.615850e-47 |
| Msa0122530 | Msa0341480 | 0.806387 | 8.430153e-50 | -8.615850e-47 |
| Msa0163510 | Msa0341480 | 0.801313 | 9.550167e-49 | -8.615850e-47 |
| Msa0174100 | Msa0341480 | 0.800854 | 1.185635e-48 | -8.615850e-47 |
| Msa0217670 | Msa0341480 | 0.814311 | 1.643744e-51 | -8.615850e-47 |
| Msa0232790 | Msa0341480 | 0.804624 | 1.975374e-49 | -8.615850e-47 |
| Msa0234410 | Msa0341480 | -0.814344 | 1.615738e-51 | -8.615850e-47 |
| Msa0237320 | Msa0341480 | 0.814656 | 1.378797e-51 | -8.615850e-47 |
| Msa0256140 | Msa0341480 | 0.833857 | 4.189850e-56 | -8.615850e-47 |
| Msa0257490 | Msa0341480 | 0.814901 | 1.216404e-51 | -8.615850e-47 |
| Msa0259680 | Msa0341480 | 0.993365 | 3.103508e-199 | -8.615850e-47 |
| Msa0272300 | Msa0341480 | 0.809316 | 2.010011e-50 | -8.615850e-47 |
| Msa0274740 | Msa0341480 | 0.818854 | 1.577597e-52 | -8.615850e-47 |
| Msa0277960 | Msa0341480 | 0.804586 | 2.011558e-49 | -8.615850e-47 |
| Msa0296790 | Msa0341480 | 0.806398 | 8.389021e-50 | -8.615850e-47 |
| Msa0315540 | Msa0341480 | 0.808220 | 3.446991e-50 | -8.615850e-47 |
| Msa0336450 | Msa0341480 | 0.810142 | 1.335271e-50 | -8.615850e-47 |
| Msa0341480 | Msa0367760 | 0.801570 | 8.460016e-49 | -8.615850e-47 |
| Msa0341480 | Msa0385500 | 0.835505 | 1.613950e-56 | -8.615850e-47 |
| Msa0341480 | Msa0388730 | 0.804508 | 2.088427e-49 | -8.615850e-47 |
| Msa0341480 | Msa0403770 | 0.809709 | 1.655102e-50 | -8.615850e-47 |
| Msa0341480 | Msa0431980 | 0.811141 | 8.122287e-51 | -8.615850e-47 |
| Msa0341480 | Msa0439980 | 0.826564 | 2.531548e-54 | -8.615850e-47 |
| Msa0341480 | Msa0466350 | 0.823640 | 1.242631e-53 | -8.615850e-47 |
| Msa0341480 | Msa0470880 | 0.805436 | 1.336133e-49 | -8.615850e-47 |
| Msa0341480 | Msa0485710 | 0.824973 | 6.036857e-54 | -8.615850e-47 |
| Msa0341480 | Msa0515340 | 0.803668 | 3.122965e-49 | -8.615850e-47 |
| Msa0341480 | Msa0520850 | 0.817711 | 2.861584e-52 | -8.615850e-47 |
| Msa0341480 | Msa0527540 | 0.836376 | 9.701551e-57 | -8.615850e-47 |
| Msa0341480 | Msa0528990 | 0.822840 | 1.910422e-53 | -8.615850e-47 |
| Msa0341480 | Msa0529000 | 0.812315 | 4.511066e-51 | -8.615850e-47 |
| Msa0341480 | Msa0542560 | 0.828059 | 1.109550e-54 | -8.615850e-47 |
| Msa0341480 | Msa0544160 | 0.814360 | 1.603167e-51 | -8.615850e-47 |
| Msa0341480 | Msa0549950 | 0.817654 | 2.948098e-52 | -8.615850e-47 |
| Msa0341480 | Msa0558650 | 0.813647 | 2.302107e-51 | -8.615850e-47 |
| Msa0341480 | Msa0567520 | 0.808065 | 3.719837e-50 | -8.615850e-47 |
| Msa0341480 | Msa0574930 | 0.826797 | 2.227301e-54 | -8.615850e-47 |
| Msa0341480 | Msa0578410 | 0.816992 | 4.154180e-52 | -8.615850e-47 |
| Msa0341480 | Msa0604290 | 0.819923 | 9.000465e-53 | -8.615850e-47 |
| Msa0341480 | Msa0610550 | 0.820980 | 5.150036e-53 | -8.615850e-47 |
| Msa0341480 | Msa0610830 | 0.807807 | 4.220467e-50 | -8.615850e-47 |
| Msa0341480 | Msa0613420 | 0.813843 | 2.084256e-51 | -8.615850e-47 |
| Msa0341480 | Msa0646020 | 0.811870 | 5.639309e-51 | -8.615850e-47 |
| Msa0341480 | Msa0646420 | 0.815458 | 9.148731e-52 | -8.615850e-47 |
| Msa0341480 | Msa0662220 | 0.814096 | 1.833255e-51 | -8.615850e-47 |
| Msa0341480 | Msa0689320 | 0.842203 | 2.985111e-58 | -8.615850e-47 |
| Msa0341480 | Msa0693520 | 0.824336 | 8.528818e-54 | -8.615850e-47 |
| Msa0341480 | Msa0703810 | 0.858536 | 7.702404e-63 | -8.615850e-47 |
| Msa0341480 | Msa0719180 | 0.808205 | 3.472212e-50 | -8.615850e-47 |
| Msa0341480 | Msa0741440 | 0.808029 | 3.786258e-50 | -8.615850e-47 |
| Msa0341480 | Msa0769970 | 0.848048 | 7.856387e-60 | -8.615850e-47 |
| Msa0341480 | Msa0828590 | 0.823165 | 1.604432e-53 | -8.615850e-47 |
| Msa0341480 | Msa0878220 | 0.836724 | 7.911972e-57 | -8.615850e-47 |
| Msa0341480 | Msa0930740 | 0.804039 | 2.616052e-49 | -8.615850e-47 |
| Msa0341480 | Msa0943970 | 0.838132 | 3.447583e-57 | -8.615850e-47 |
| Msa0341480 | Msa0944020 | 0.853928 | 1.727289e-61 | -8.615850e-47 |
| Msa0341480 | Msa0985180 | 0.827613 | 1.420189e-54 | -8.615850e-47 |
| Msa0341480 | Msa1059470 | 0.802192 | 6.303469e-49 | -8.615850e-47 |
| Msa0341480 | Msa1062040 | 0.822487 | 2.307440e-53 | -8.615850e-47 |
| Msa0341480 | Msa1158640 | -0.823602 | 1.268194e-53 | -8.615850e-47 |
| Msa0341480 | Msa1159160 | 0.815113 | 1.091757e-51 | -8.615850e-47 |
| Msa0341480 | Msa1176380 | 0.807766 | 4.306589e-50 | -8.615850e-47 |
| Msa0341480 | Msa1178580 | 0.806618 | 7.537275e-50 | -8.615850e-47 |
| Msa0341480 | Msa1186760 | 0.809313 | 2.012513e-50 | -8.615850e-47 |
| Msa0341480 | Msa1213890 | 0.817623 | 2.996221e-52 | -8.615850e-47 |
| Msa0341480 | Msa1218620 | 0.816233 | 6.147016e-52 | -8.615850e-47 |
| Msa0341480 | Msa1228040 | 0.814218 | 1.723545e-51 | -8.615850e-47 |
| Msa0341480 | Msa1276150 | 0.806751 | 7.063524e-50 | -8.615850e-47 |
| Msa0341480 | Msa1277410 | 0.801549 | 8.545959e-49 | -8.615850e-47 |
| Msa0341480 | Msa1341060 | 0.828288 | 9.770417e-55 | -8.615850e-47 |
| Msa0341480 | Msa1346840 | 0.808185 | 3.507146e-50 | -8.615850e-47 |
| Msa0341480 | Msa1364350 | -0.806928 | 6.482637e-50 | -8.615850e-47 |
| Msa0341480 | Msa1368710 | 0.813702 | 2.238754e-51 | -8.615850e-47 |
| Msa0341480 | Msa1392980 | 0.827252 | 1.733924e-54 | -8.615850e-47 |
| Msa0341480 | Msa1400200 | 0.803811 | 2.917128e-49 | -8.615850e-47 |
| Msa0341480 | Msa1401990 | 0.825638 | 4.202365e-54 | -8.615850e-47 |
| Msa0341480 | Msa1407370 | 0.808803 | 2.588027e-50 | -8.615850e-47 |
| Msa0341480 | Msa1407760 | 0.849375 | 3.367015e-60 | -8.615850e-47 |
| Msa0341480 | Msa1410550 | 0.826617 | 2.458212e-54 | -8.615850e-47 |
| Msa0341480 | Msa1419690 | 0.828587 | 8.276845e-55 | -8.615850e-47 |
| Msa0341480 | Msa1419840 | 0.800098 | 1.690346e-48 | -8.615850e-47 |
| Msa0341480 | Msa1437730 | 0.845257 | 4.546854e-59 | -8.615850e-47 |
| Msa0341480 | Msa1457620 | 0.805293 | 1.431627e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0341480 | MtrunA17_Chr2g0333751 | 98.655 | 223 | 3 | 0 | 1 | 223 | 1 | 223 | 2.43e-162 | 447 |
| Msa0341480 | MtrunA17_Chr4g0001201 | 85.377 | 212 | 31 | 0 | 12 | 223 | 2 | 213 | 1.44e-132 | 371 |
| Msa0341480 | MtrunA17_Chr4g0011831 | 36.481 | 233 | 127 | 6 | 6 | 223 | 14 | 240 | 6.90e-42 | 142 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0341480 | AT1G15880.1 | 79.452 | 219 | 44 | 1 | 5 | 223 | 6 | 223 | 9.32e-125 | 352 |
| Msa0341480 | AT2G45200.1 | 36.481 | 233 | 127 | 5 | 6 | 223 | 13 | 239 | 4.91e-41 | 140 |
| Msa0341480 | AT2G45200.2 | 33.865 | 251 | 127 | 5 | 6 | 223 | 13 | 257 | 3.23e-38 | 133 |
Find 65 sgRNAs with CRISPR-Local
Find 261 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TATTGTATACTTGTCTATTA+TGG | 0.153434 | 2_4:-63130751 | Msa0341480:three_prime_UTR |
| TGATGGATGCACGCTCTTTA+AGG | 0.233741 | 2_4:+63131631 | None:intergenic |
| GTCTTCCAGCGTTCGACTTT+TGG | 0.265092 | 2_4:-63131249 | Msa0341480:CDS |
| ATTGTATACTTGTCTATTAT+GGG | 0.266472 | 2_4:-63130750 | Msa0341480:three_prime_UTR |
| ACCATTATACTTGCCCTTGT+TGG | 0.314904 | 2_4:-63130864 | Msa0341480:CDS |
| TGATCGAACAAGATTAGATT+TGG | 0.341869 | 2_4:-63131685 | Msa0341480:CDS |
| TGAGATCTTGATAAATTTCT+TGG | 0.346054 | 2_4:+63132676 | None:intergenic |
| CCATTATACTTGCCCTTGTT+GGG | 0.360182 | 2_4:-63130863 | Msa0341480:CDS |
| CAATAAACATCATCTTTACT+TGG | 0.366621 | 2_4:+63130803 | None:intergenic |
| GTAATGCATTGTTTGATTGC+TGG | 0.385471 | 2_4:-63130720 | Msa0341480:three_prime_UTR |
| ATGTGTTACAATTCATAGTT+CGG | 0.390079 | 2_4:-63130621 | Msa0341480:three_prime_UTR |
| TGTTTATTGTGTTGGTAGCT+TGG | 0.396853 | 2_4:-63130789 | Msa0341480:three_prime_UTR |
| GTCCTCTGGTGGGTCTGAAA+TGG | 0.402834 | 2_4:-63132721 | Msa0341480:CDS |
| CCCAACAAGGGCAAGTATAA+TGG | 0.403543 | 2_4:+63130863 | None:intergenic |
| TTGGGATTCCCTTCGCAAAC+AGG | 0.411483 | 2_4:-63135004 | Msa0341480:intron |
| CAGGCTTGGGTGTCCTCTGG+TGG | 0.415447 | 2_4:-63132732 | Msa0341480:CDS |
| ATCCATGGAGGTTCAAAGTT+GGG | 0.434741 | 2_4:-63135022 | Msa0341480:exon |
| TAAAATATTTGTAGAGTGAA+AGG | 0.434967 | 2_4:+63130557 | None:intergenic |
| ATGCAGGCTTGGGTGTCCTC+TGG | 0.438772 | 2_4:-63132735 | Msa0341480:CDS |
| AGCTCAGTTGGATGAGCAAA+TGG | 0.441426 | 2_4:-63132874 | Msa0341480:CDS |
| TTCACAAATTAATCTTTACT+AGG | 0.448626 | 2_4:+63130675 | None:intergenic |
| AAAATATTTGTAGAGTGAAA+GGG | 0.449936 | 2_4:+63130558 | None:intergenic |
| AACAAGATTAGATTTGGAAG+AGG | 0.457292 | 2_4:-63131679 | Msa0341480:CDS |
| TCAACGAAAGCTTCTACAAA+AGG | 0.463049 | 2_4:-63132831 | Msa0341480:CDS |
| CAGAGAGTGATCTGGAGTCT+TGG | 0.464648 | 2_4:-63132800 | Msa0341480:CDS |
| TGAGGCAACAGAGAGTGATC+TGG | 0.471531 | 2_4:-63132808 | Msa0341480:CDS |
| TAAACTCACAGATGCAGGCT+TGG | 0.471681 | 2_4:-63132746 | Msa0341480:CDS |
| AAACTCACAGATGCAGGCTT+GGG | 0.480195 | 2_4:-63132745 | Msa0341480:CDS |
| CTGTCCTGTACTGCGGCTGA+TGG | 0.485234 | 2_4:+63131614 | None:intergenic |
| AAAGATGATGTTTATTGTGT+TGG | 0.505371 | 2_4:-63130797 | Msa0341480:three_prime_UTR |
| CATCCATGGAGGTTCAAAGT+TGG | 0.506812 | 2_4:-63135023 | Msa0341480:exon |
| ACAAGTAAACTCACAGATGC+AGG | 0.514539 | 2_4:-63132751 | Msa0341480:CDS |
| AGGCTTGGGTGTCCTCTGGT+GGG | 0.515681 | 2_4:-63132731 | Msa0341480:CDS |
| GTCTGTGGCGTGTGAACAGA+CGG | 0.519084 | 2_4:-63135077 | Msa0341480:five_prime_UTR |
| TTGTATACTTGTCTATTATG+GGG | 0.525930 | 2_4:-63130749 | Msa0341480:three_prime_UTR |
| GCATCCATCAGCCGCAGTAC+AGG | 0.527799 | 2_4:-63131618 | Msa0341480:CDS |
| AAGAAAACTTGAAGCTCAGT+TGG | 0.529386 | 2_4:-63132886 | Msa0341480:CDS |
| AGATTAGATTTGGAAGAGGG+TGG | 0.530846 | 2_4:-63131675 | Msa0341480:CDS |
| AGAAATGAAAATTGAAGAAG+CGG | 0.531407 | 2_4:-63135110 | Msa0341480:five_prime_UTR |
| CAACTTTGAACCTCCATGGA+TGG | 0.538871 | 2_4:+63135024 | None:intergenic |
| CATCAGCCGCAGTACAGGAC+AGG | 0.540958 | 2_4:-63131613 | Msa0341480:intron |
| AGCGGTGTGGTCGTCGTCTG+TGG | 0.544478 | 2_4:-63135092 | Msa0341480:five_prime_UTR |
| ATCCCAACTTTGAACCTCCA+TGG | 0.546573 | 2_4:+63135020 | None:intergenic |
| ATGCATTGTTTGATTGCTGG+TGG | 0.554948 | 2_4:-63130717 | Msa0341480:three_prime_UTR |
| TGTATACTTGTCTATTATGG+GGG | 0.555133 | 2_4:-63130748 | Msa0341480:three_prime_UTR |
| GCTTAGCTCTAAGATTAGAC+CGG | 0.556599 | 2_4:+63131745 | None:intergenic |
| AATTGAAACCTGTTTGCGAA+GGG | 0.560013 | 2_4:+63134996 | None:intergenic |
| ACAAGATTAGATTTGGAAGA+GGG | 0.565048 | 2_4:-63131678 | Msa0341480:CDS |
| AAATTGAAACCTGTTTGCGA+AGG | 0.567814 | 2_4:+63134995 | None:intergenic |
| CTAACCATCTCATCCATCCA+TGG | 0.579099 | 2_4:-63135037 | Msa0341480:exon |
| TCCCACCAAAAGTCGAACGC+TGG | 0.611928 | 2_4:+63131244 | None:intergenic |
| AAATGCATACGGACCCAACA+AGG | 0.613983 | 2_4:+63130850 | None:intergenic |
| CGTGAGCAGTCGCCTCCCAA+CGG | 0.616247 | 2_4:-63131202 | Msa0341480:intron |
| ACCTCCATGGATGGATGAGA+TGG | 0.623902 | 2_4:+63135033 | None:intergenic |
| GTATACTTGTCTATTATGGG+GGG | 0.624761 | 2_4:-63130747 | Msa0341480:three_prime_UTR |
| TGGATGCACGCTCTTTAAGG+AGG | 0.630188 | 2_4:+63131634 | None:intergenic |
| TCACAAGCACAAGCAACACT+CGG | 0.631705 | 2_4:-63131279 | Msa0341480:CDS |
| TGAAAATTGAAGAAGCGGTG+TGG | 0.662471 | 2_4:-63135105 | Msa0341480:five_prime_UTR |
| GAAAGCTTCTACAAAAGGTG+AGG | 0.666826 | 2_4:-63132826 | Msa0341480:CDS |
| AATGCATACGGACCCAACAA+GGG | 0.667761 | 2_4:+63130851 | None:intergenic |
| ACAGCAATCATACCGTTGGG+AGG | 0.674625 | 2_4:+63131190 | None:intergenic |
| AACCATTTCAGACCCACCAG+AGG | 0.691979 | 2_4:+63132719 | None:intergenic |
| TAACAACCTGTCCTGTACTG+CGG | 0.715310 | 2_4:+63131607 | None:intergenic |
| ACCATCTCATCCATCCATGG+AGG | 0.728976 | 2_4:-63135034 | Msa0341480:exon |
| AATTTATCAAGATCTCACCC+AGG | 0.754080 | 2_4:-63132670 | Msa0341480:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TCATTTTTTCAAATAATTAT+TGG | + | chr2_4:63131060-63131079 | None:intergenic | 10.0% |
| !! | ATATTTAATGATAAATGAAA+AGG | + | chr2_4:63133246-63133265 | None:intergenic | 10.0% |
| !! | TATAATAAATAATGTTATAG+GGG | + | chr2_4:63133740-63133759 | None:intergenic | 10.0% |
| !! | GTTATAATAAATAATGTTAT+AGG | + | chr2_4:63133742-63133761 | None:intergenic | 10.0% |
| !!! | CAAAAATATTTGAAATATAA+AGG | + | chr2_4:63133888-63133907 | None:intergenic | 10.0% |
| !!! | AAGCTTATATATAATTTTAT+AGG | + | chr2_4:63134237-63134256 | None:intergenic | 10.0% |
| !! | GTTTAAATAAATATTGAATA+AGG | - | chr2_4:63134557-63134576 | Msa0341480:intron | 10.0% |
| !!! | GCATATTTTATGTTTTTAAA+TGG | - | chr2_4:63130570-63130589 | Msa0341480:three_prime_UTR | 15.0% |
| !! | TAAAATTCAAAACTATGATA+TGG | - | chr2_4:63130784-63130803 | Msa0341480:three_prime_UTR | 15.0% |
| !! | AAAATTCAAAACTATGATAT+GGG | - | chr2_4:63130785-63130804 | Msa0341480:three_prime_UTR | 15.0% |
| !!! | TTTATCACTTTTTAATCTAA+TGG | - | chr2_4:63131324-63131343 | Msa0341480:intron | 15.0% |
| !!! | TATGTTCTTTTTGTTATTTT+GGG | - | chr2_4:63131951-63131970 | Msa0341480:intron | 15.0% |
| !!! | TTTTTTTTTTTCTTTCTTGA+AGG | - | chr2_4:63132707-63132726 | Msa0341480:CDS | 15.0% |
| !!! | TTTTTTTTTTCTTTCTTGAA+GGG | - | chr2_4:63132708-63132727 | Msa0341480:CDS | 15.0% |
| !! | GTAACAGTTATAATAAATAA+TGG | + | chr2_4:63133785-63133804 | None:intergenic | 15.0% |
| !!! | TTAATGTTTTATTTGGTTGT+CGG | - | chr2_4:63130849-63130868 | Msa0341480:CDS | 20.0% |
| !! | TTAATGAGTTTGATATATGA+TGG | + | chr2_4:63131624-63131643 | None:intergenic | 20.0% |
| !!! | CTATGTTCTTTTTGTTATTT+TGG | - | chr2_4:63131950-63131969 | Msa0341480:intron | 20.0% |
| !!! | AAAAACTTGCTTTTGAAAAA+GGG | + | chr2_4:63132145-63132164 | None:intergenic | 20.0% |
| !!! | TAAGCAAAAAACTACTTTTA+AGG | + | chr2_4:63132308-63132327 | None:intergenic | 20.0% |
| !!! | TCTTTTTATCTGTATTATGA+CGG | + | chr2_4:63132496-63132515 | None:intergenic | 20.0% |
| !!! | ATCAAGTAATTTTGTTGAAT+TGG | - | chr2_4:63132683-63132702 | Msa0341480:CDS | 20.0% |
| !!! | TCAAGTAATTTTGTTGAATT+GGG | - | chr2_4:63132684-63132703 | Msa0341480:CDS | 20.0% |
| !!! | AATGGTTTTATATCGTAAAT+TGG | - | chr2_4:63132864-63132883 | Msa0341480:CDS | 20.0% |
| !! | AGGTCAAGTATAAATTTATT+AGG | + | chr2_4:63133283-63133302 | None:intergenic | 20.0% |
| !!! | TGCAATTTGTGTTTTAAAAA+AGG | + | chr2_4:63133410-63133429 | None:intergenic | 20.0% |
| !! | ACATTGGAATTGAAATAAAA+GGG | + | chr2_4:63133678-63133697 | None:intergenic | 20.0% |
| !! | TTTAAATACATCTAACAAGT+TGG | + | chr2_4:63133935-63133954 | None:intergenic | 20.0% |
| !! | GAAAATAAGAAAAATGCATA+CGG | + | chr2_4:63134884-63134903 | None:intergenic | 20.0% |
| !!! | TTTTTCTTATTTTCATCTAC+TGG | - | chr2_4:63134890-63134909 | Msa0341480:intron | 20.0% |
| !! | TATTGTATACTTGTCTATTA+TGG | - | chr2_4:63134969-63134988 | Msa0341480:intron | 20.0% |
| !! | ATTGTATACTTGTCTATTAT+GGG | - | chr2_4:63134970-63134989 | Msa0341480:intron | 20.0% |
| !! | TTCACAAATTAATCTTTACT+AGG | + | chr2_4:63135048-63135067 | None:intergenic | 20.0% |
| ! | AGAAATGAAAATTGAAGAAG+CGG | - | chr2_4:63130610-63130629 | Msa0341480:three_prime_UTR | 25.0% |
| ! | ACCTATAAACCATATCAAAA+GGG | + | chr2_4:63130894-63130913 | None:intergenic | 25.0% |
| ! | AACCTATAAACCATATCAAA+AGG | + | chr2_4:63130895-63130914 | None:intergenic | 25.0% |
| !!! | TATAGGTTTTGAGAATTTTC+TGG | - | chr2_4:63130907-63130926 | Msa0341480:CDS | 25.0% |
| !!! | TATAGTTTTGAGTGATGAAT+TGG | - | chr2_4:63130946-63130965 | Msa0341480:intron | 25.0% |
| !!! | ATGACATGATTTTGACATTT+TGG | - | chr2_4:63130970-63130989 | Msa0341480:intron | 25.0% |
| !!! | TGACATGATTTTGACATTTT+GGG | - | chr2_4:63130971-63130990 | Msa0341480:intron | 25.0% |
| ! | AAACAGTTTGAATTCTATAG+TGG | + | chr2_4:63131307-63131326 | None:intergenic | 25.0% |
| !! | TGATATATGATGGAACATTA+TGG | + | chr2_4:63131614-63131633 | None:intergenic | 25.0% |
| ! | CATAATACTATATACACCAA+AGG | + | chr2_4:63131835-63131854 | None:intergenic | 25.0% |
| ! | CATATACTAATAGGAAACAA+AGG | + | chr2_4:63131812-63131831 | None:intergenic | 25.0% |
| ! | CATAATACTATATACACCAA+AGG | + | chr2_4:63131835-63131854 | None:intergenic | 25.0% |
| !!! | CAAAAACTTGCTTTTGAAAA+AGG | + | chr2_4:63132146-63132165 | None:intergenic | 25.0% |
| !! | TTTTTGTAGAATCTCTATCA+CGG | - | chr2_4:63132160-63132179 | Msa0341480:intron | 25.0% |
| !! | TTTTTGCTTATAATAGTGAC+CGG | + | chr2_4:63132318-63132337 | None:intergenic | 25.0% |
| !!! | TAAGCAAAAAACTACTTTTG+AGG | - | chr2_4:63132219-63132238 | Msa0341480:intron | 25.0% |
| !! | TTTTTGCTTATAATAGTGAC+CGG | - | chr2_4:63132318-63132337 | Msa0341480:intron | 25.0% |
| !!! | ATTATTTTAAATACTCCCTC+CGG | + | chr2_4:63132340-63132359 | None:intergenic | 25.0% |
| ! | AGATCAAATAATCAAGATGA+CGG | - | chr2_4:63132376-63132395 | Msa0341480:intron | 25.0% |
| ! | AAAAGACGACTTAAAGTTTA+TGG | - | chr2_4:63132510-63132529 | Msa0341480:intron | 25.0% |
| !!! | GCATAGTTCAAGTTAATTTT+AGG | - | chr2_4:63132733-63132752 | Msa0341480:CDS | 25.0% |
| ! | TGAGATCTTGATAAATTTCT+TGG | + | chr2_4:63133047-63133066 | None:intergenic | 25.0% |
| ! | CATATTATATCATGTAGTTG+TGG | - | chr2_4:63133121-63133140 | Msa0341480:intron | 25.0% |
| !! | TTTAGTTTAAATAAGAGTGG+GGG | + | chr2_4:63133549-63133568 | None:intergenic | 25.0% |
| !! | GTTTAGTTTAAATAAGAGTG+GGG | + | chr2_4:63133550-63133569 | None:intergenic | 25.0% |
| !! | GGTTTAGTTTAAATAAGAGT+GGG | + | chr2_4:63133551-63133570 | None:intergenic | 25.0% |
| !! | AGGTTTAGTTTAAATAAGAG+TGG | + | chr2_4:63133552-63133571 | None:intergenic | 25.0% |
| ! | GACATTGGAATTGAAATAAA+AGG | + | chr2_4:63133679-63133698 | None:intergenic | 25.0% |
| ! | TTTCAATTCCAATGTCTTAT+AGG | - | chr2_4:63133683-63133702 | Msa0341480:intron | 25.0% |
| !! | GTTAGATGTATTTAAAATGC+AGG | - | chr2_4:63133939-63133958 | Msa0341480:intron | 25.0% |
| !!! | TTAAAATGCAGGAGTTTTAT+CGG | - | chr2_4:63133950-63133969 | Msa0341480:intron | 25.0% |
| ! | CAAATGTCTGATATTAAAGA+TGG | + | chr2_4:63134289-63134308 | None:intergenic | 25.0% |
| ! | GAAAAAATAATCCATTAGCT+TGG | + | chr2_4:63134312-63134331 | None:intergenic | 25.0% |
| ! | AAACTTCAAATGAACATTCA+AGG | + | chr2_4:63134334-63134353 | None:intergenic | 25.0% |
| ! | TAAAACTTGTGTAGTAGAAA+TGG | + | chr2_4:63134745-63134764 | None:intergenic | 25.0% |
| !!! | ACACAAGTTTTATTTCTCTA+TGG | - | chr2_4:63134753-63134772 | Msa0341480:intron | 25.0% |
| ! | CAATAAACATCATCTTTACT+TGG | + | chr2_4:63134920-63134939 | None:intergenic | 25.0% |
| ! | AAAGATGATGTTTATTGTGT+TGG | - | chr2_4:63134923-63134942 | Msa0341480:intron | 25.0% |
| ! | TTGTATACTTGTCTATTATG+GGG | - | chr2_4:63134971-63134990 | Msa0341480:intron | 25.0% |
| ! | ATGTGTTACAATTCATAGTT+CGG | - | chr2_4:63135099-63135118 | Msa0341480:five_prime_UTR | 25.0% |
| ! | ACCCTTTTGATATGGTTTAT+AGG | - | chr2_4:63130890-63130909 | Msa0341480:CDS | 30.0% |
| !! | TTTGACTAGTTTCTGATGAT+AGG | - | chr2_4:63131182-63131201 | Msa0341480:intron | 30.0% |
| !! | TTGACTAGTTTCTGATGATA+GGG | - | chr2_4:63131183-63131202 | Msa0341480:intron | 30.0% |
| TGCTTAGAAAACAAGTTTGT+AGG | - | chr2_4:63131247-63131266 | Msa0341480:CDS | 30.0% | |
| ! | ATATTCTGATGTTTTACGTG+TGG | - | chr2_4:63131389-63131408 | Msa0341480:intron | 30.0% |
| TGTTAGACTTTCATATGACA+AGG | + | chr2_4:63131472-63131491 | None:intergenic | 30.0% | |
| ATATGAAAGTCTAACATGAG+AGG | - | chr2_4:63131476-63131495 | Msa0341480:intron | 30.0% | |
| TCAATTTCTGCATATGCATT+CGG | - | chr2_4:63131703-63131722 | Msa0341480:CDS | 30.0% | |
| ACCTGGATAAAAGATTGATT+CGG | - | chr2_4:63131731-63131750 | Msa0341480:CDS | 30.0% | |
| TTCCTATTAGTATATGCCTT+TGG | - | chr2_4:63131816-63131835 | Msa0341480:intron | 30.0% | |
| TTCCTATTAGTATATGCCTT+TGG | - | chr2_4:63131816-63131835 | Msa0341480:intron | 30.0% | |
| CATTGAATGAATGATGTATG+TGG | - | chr2_4:63132244-63132263 | Msa0341480:intron | 30.0% | |
| TAGCAAAAACCTGTATAACT+TGG | - | chr2_4:63132604-63132623 | Msa0341480:intron | 30.0% | |
| ACAGAAAAACCAAGTTATAC+AGG | + | chr2_4:63132616-63132635 | None:intergenic | 30.0% | |
| ! | TTGTCTTTTTAACCTTTTGC+AGG | - | chr2_4:63132810-63132829 | Msa0341480:CDS | 30.0% |
| TATGCTCACACATAATGATT+GGG | + | chr2_4:63133105-63133124 | None:intergenic | 30.0% | |
| ATATGCTCACACATAATGAT+TGG | + | chr2_4:63133106-63133125 | None:intergenic | 30.0% | |
| ATAAAGAACCCTTTACATCA+GGG | + | chr2_4:63133188-63133207 | None:intergenic | 30.0% | |
| !!! | GAGAATTCTTTTGAAACTGA+AGG | + | chr2_4:63133303-63133322 | None:intergenic | 30.0% |
| TCAACTTCAGAATCAAAACA+GGG | + | chr2_4:63133445-63133464 | None:intergenic | 30.0% | |
| AATTGCCAGTTAGAACAATT+AGG | + | chr2_4:63133596-63133615 | None:intergenic | 30.0% | |
| TTGGAATTGAAATAAAAGGG+TGG | + | chr2_4:63133675-63133694 | None:intergenic | 30.0% | |
| AATGACATCCTATAAGACAT+TGG | + | chr2_4:63133694-63133713 | None:intergenic | 30.0% | |
| ! | ACTTTTTAATCTTCTCCATC+AGG | - | chr2_4:63133807-63133826 | Msa0341480:intron | 30.0% |
| TGATCGAACAAGATTAGATT+TGG | - | chr2_4:63134035-63134054 | Msa0341480:intron | 30.0% | |
| AACAAGATTAGATTTGGAAG+AGG | - | chr2_4:63134041-63134060 | Msa0341480:intron | 30.0% | |
| ACAAGATTAGATTTGGAAGA+GGG | - | chr2_4:63134042-63134061 | Msa0341480:intron | 30.0% | |
| ! | TTTTATCAAGATTGTTCCAC+TGG | - | chr2_4:63134170-63134189 | Msa0341480:intron | 30.0% |
| TCTGATATTAAAGATGGCAT+TGG | + | chr2_4:63134283-63134302 | None:intergenic | 30.0% | |
| !!! | CTGAAGTTTTTTTTTTGTCC+AGG | - | chr2_4:63134704-63134723 | Msa0341480:intron | 30.0% |
| TGGAATATTAGTTATTCTCC+TGG | + | chr2_4:63134725-63134744 | None:intergenic | 30.0% | |
| CTATGGTGTTTGTTTAATGA+CGG | - | chr2_4:63134770-63134789 | Msa0341480:intron | 30.0% | |
| AATAAAGCGAAAAAAGTCGA+TGG | - | chr2_4:63134831-63134850 | Msa0341480:intron | 30.0% | |
| TGTATACTTGTCTATTATGG+GGG | - | chr2_4:63134972-63134991 | Msa0341480:intron | 30.0% | |
| AATTGAAACCTGTTTGCGAA+GGG | + | chr2_4:63130727-63130746 | None:intergenic | 35.0% | |
| AAATTGAAACCTGTTTGCGA+AGG | + | chr2_4:63130728-63130747 | None:intergenic | 35.0% | |
| TATGGGTTTGTGTAATTCAG+AGG | - | chr2_4:63130802-63130821 | Msa0341480:exon | 35.0% | |
| !! | TTTTATTTGGTTGTCGGTGA+TGG | - | chr2_4:63130855-63130874 | Msa0341480:CDS | 35.0% |
| TTTATTTGGTTGTCGGTGAT+GGG | - | chr2_4:63130856-63130875 | Msa0341480:CDS | 35.0% | |
| ! | GAGTTTCTACCCTTTTGATA+TGG | - | chr2_4:63130882-63130901 | Msa0341480:CDS | 35.0% |
| !!! | TTGACATTTTGGGTTCATCT+AGG | - | chr2_4:63130981-63131000 | Msa0341480:intron | 35.0% |
| !! | TGACTAGTTTCTGATGATAG+GGG | - | chr2_4:63131184-63131203 | Msa0341480:intron | 35.0% |
| GGGCTATAAATTCTGATCTT+TGG | - | chr2_4:63131204-63131223 | Msa0341480:CDS | 35.0% | |
| AACATGAGAGGATTCATTCT+CGG | - | chr2_4:63131488-63131507 | Msa0341480:intron | 35.0% | |
| TGTTTCTTGCATCTTACAAC+CGG | + | chr2_4:63131525-63131544 | None:intergenic | 35.0% | |
| TGCATATACAGCAACATAAG+TGG | - | chr2_4:63131563-63131582 | Msa0341480:intron | 35.0% | |
| GCATATACAGCAACATAAGT+GGG | - | chr2_4:63131564-63131583 | Msa0341480:intron | 35.0% | |
| CATATACAGCAACATAAGTG+GGG | - | chr2_4:63131565-63131584 | Msa0341480:intron | 35.0% | |
| ATTGATGTACAAATCACTCG+AGG | + | chr2_4:63131688-63131707 | None:intergenic | 35.0% | |
| ! | TCCGAATCAATCTTTTATCC+AGG | + | chr2_4:63131735-63131754 | None:intergenic | 35.0% |
| ! | CACCAAAGGCATATACTAAT+AGG | + | chr2_4:63131821-63131840 | None:intergenic | 35.0% |
| ! | CACCAAAGGCATATACTAAT+AGG | + | chr2_4:63131821-63131840 | None:intergenic | 35.0% |
| ! | TCTTGTTAAACCTTTTCCCA+CGG | - | chr2_4:63131919-63131938 | Msa0341480:intron | 35.0% |
| TCATAACTCATACAGTCATC+AGG | + | chr2_4:63132055-63132074 | None:intergenic | 35.0% | |
| CATTGAATGAGTGATGTATG+TGG | + | chr2_4:63132283-63132302 | None:intergenic | 35.0% | |
| AATCATCTTGATCAGACTTC+TGG | - | chr2_4:63132431-63132450 | Msa0341480:intron | 35.0% | |
| !! | ATCTGTATTATGACGGACTA+CGG | + | chr2_4:63132489-63132508 | None:intergenic | 35.0% |
| AAGAAAACTTGAAGCTCAGT+TGG | - | chr2_4:63132834-63132853 | Msa0341480:CDS | 35.0% | |
| TCAACGAAAGCTTCTACAAA+AGG | - | chr2_4:63132889-63132908 | Msa0341480:CDS | 35.0% | |
| AATTTATCAAGATCTCACCC+AGG | - | chr2_4:63133050-63133069 | Msa0341480:intron | 35.0% | |
| ATGCTCACACATAATGATTG+GGG | + | chr2_4:63133104-63133123 | None:intergenic | 35.0% | |
| CATAAAGAACCCTTTACATC+AGG | + | chr2_4:63133189-63133208 | None:intergenic | 35.0% | |
| GTTCTTTATGATAGCTGAGA+AGG | - | chr2_4:63133199-63133218 | Msa0341480:intron | 35.0% | |
| GTCAACTTCAGAATCAAAAC+AGG | + | chr2_4:63133446-63133465 | None:intergenic | 35.0% | |
| !! | AGTTCTGAAAAACAGAGAAG+TGG | + | chr2_4:63133498-63133517 | None:intergenic | 35.0% |
| AGTCACCTAATTGTTCTAAC+TGG | - | chr2_4:63133588-63133607 | Msa0341480:intron | 35.0% | |
| ! | TATTAAAGATGGCATTGGAG+CGG | + | chr2_4:63134278-63134297 | None:intergenic | 35.0% |
| GTTTATTCTTGTACTGCAGA+TGG | - | chr2_4:63134407-63134426 | Msa0341480:intron | 35.0% | |
| !! | TGTTTATTGTGTTGGTAGCT+TGG | - | chr2_4:63134931-63134950 | Msa0341480:intron | 35.0% |
| GTATACTTGTCTATTATGGG+GGG | - | chr2_4:63134973-63134992 | Msa0341480:intron | 35.0% | |
| GTAATGCATTGTTTGATTGC+TGG | - | chr2_4:63135000-63135019 | Msa0341480:intron | 35.0% | |
| TGAAAATTGAAGAAGCGGTG+TGG | - | chr2_4:63130615-63130634 | Msa0341480:three_prime_UTR | 40.0% | |
| ATCCATGGAGGTTCAAAGTT+GGG | - | chr2_4:63130698-63130717 | Msa0341480:three_prime_UTR | 40.0% | |
| TTATTTGGTTGTCGGTGATG+GGG | - | chr2_4:63130857-63130876 | Msa0341480:CDS | 40.0% | |
| GATCTATGAAGCACATACAC+TGG | - | chr2_4:63131010-63131029 | Msa0341480:intron | 40.0% | |
| TTTCTGATCATAGGTGTGTC+AGG | + | chr2_4:63131127-63131146 | None:intergenic | 40.0% | |
| ! | GCACTGACATTTCTGATCAT+AGG | + | chr2_4:63131136-63131155 | None:intergenic | 40.0% |
| ! | TTCTGATGTTTTACGTGTGG+TGG | - | chr2_4:63131392-63131411 | Msa0341480:intron | 40.0% |
| ! | ATGTTTTACGTGTGGTGGTA+TGG | - | chr2_4:63131397-63131416 | Msa0341480:intron | 40.0% |
| TTTCATATGACAAGGTGAGG+TGG | + | chr2_4:63131464-63131483 | None:intergenic | 40.0% | |
| GACTTTCATATGACAAGGTG+AGG | + | chr2_4:63131467-63131486 | None:intergenic | 40.0% | |
| TGCTTATAATAGTGACCGGA+GGG | + | chr2_4:63132322-63132341 | None:intergenic | 40.0% | |
| TTGCTTATAATAGTGACCGG+AGG | + | chr2_4:63132321-63132340 | None:intergenic | 40.0% | |
| TTGCTTATAATAGTGACCGG+AGG | - | chr2_4:63132321-63132340 | Msa0341480:intron | 40.0% | |
| TGCTTATAATAGTGACCGGA+GGG | - | chr2_4:63132322-63132341 | Msa0341480:intron | 40.0% | |
| ! | AATCAAGATGACGGCAGTAT+TGG | - | chr2_4:63132385-63132404 | Msa0341480:intron | 40.0% |
| ! | CAAGTTTTCTTGCCTGCAAA+AGG | + | chr2_4:63132825-63132844 | None:intergenic | 40.0% |
| GAAAGCTTCTACAAAAGGTG+AGG | - | chr2_4:63132894-63132913 | Msa0341480:intron | 40.0% | |
| ACAAGTAAACTCACAGATGC+AGG | - | chr2_4:63132969-63132988 | Msa0341480:intron | 40.0% | |
| GCTCATACGATGTAATACCT+GGG | + | chr2_4:63133070-63133089 | None:intergenic | 40.0% | |
| AGCTCATACGATGTAATACC+TGG | + | chr2_4:63133071-63133090 | None:intergenic | 40.0% | |
| ! | AGGGAGTACAGTTTGCAAAT+AGG | + | chr2_4:63133169-63133188 | None:intergenic | 40.0% |
| AACTGTACTCCCTGATGTAA+AGG | - | chr2_4:63133176-63133195 | Msa0341480:intron | 40.0% | |
| ACTGTACTCCCTGATGTAAA+GGG | - | chr2_4:63133177-63133196 | Msa0341480:intron | 40.0% | |
| ! | CTCTTTTCTACAGATGAGAG+AGG | - | chr2_4:63133320-63133339 | Msa0341480:intron | 40.0% |
| ! | ATGAGAGAGGAGTATAACAG+AGG | - | chr2_4:63133333-63133352 | Msa0341480:intron | 40.0% |
| ! | TGAGAGAGGAGTATAACAGA+GGG | - | chr2_4:63133334-63133353 | Msa0341480:intron | 40.0% |
| !! | GGAGTCTTTCTGAAGCTAAA+AGG | + | chr2_4:63133389-63133408 | None:intergenic | 40.0% |
| ACTTCAGAATCAAAACAGGG+TGG | + | chr2_4:63133442-63133461 | None:intergenic | 40.0% | |
| AAATAAGAGTGGGGGTAGAA+GGG | + | chr2_4:63133541-63133560 | None:intergenic | 40.0% | |
| TAAATAAGAGTGGGGGTAGA+AGG | + | chr2_4:63133542-63133561 | None:intergenic | 40.0% | |
| ACTAAACCTTCTAACCTCTC+TGG | - | chr2_4:63133563-63133582 | Msa0341480:intron | 40.0% | |
| ACATCACAAAGCAACAGAGT+AGG | + | chr2_4:63133833-63133852 | None:intergenic | 40.0% | |
| !! | CTCTGTTGCTTTGTGATGTT+AGG | - | chr2_4:63133834-63133853 | Msa0341480:intron | 40.0% |
| TGTCTGACAGATCTAAGCTT+AGG | + | chr2_4:63133912-63133931 | None:intergenic | 40.0% | |
| !! | GCTTAGCTCTAAGATTAGAC+CGG | + | chr2_4:63133978-63133997 | None:intergenic | 40.0% |
| AGATTAGATTTGGAAGAGGG+TGG | - | chr2_4:63134045-63134064 | Msa0341480:intron | 40.0% | |
| TCAGACATTTGCCAAGCTAA+TGG | - | chr2_4:63134298-63134317 | Msa0341480:intron | 40.0% | |
| TCAACAGCAATCATACCGTT+GGG | + | chr2_4:63134536-63134555 | None:intergenic | 40.0% | |
| TTCAACAGCAATCATACCGT+TGG | + | chr2_4:63134537-63134556 | None:intergenic | 40.0% | |
| ! | ACGGCTTTTAACAATGTTGC+AGG | - | chr2_4:63134789-63134808 | Msa0341480:intron | 40.0% |
| ACCATTATACTTGCCCTTGT+TGG | - | chr2_4:63134856-63134875 | Msa0341480:intron | 40.0% | |
| CCATTATACTTGCCCTTGTT+GGG | - | chr2_4:63134857-63134876 | Msa0341480:intron | 40.0% | |
| ATGCATTGTTTGATTGCTGG+TGG | - | chr2_4:63135003-63135022 | Msa0341480:intron | 40.0% | |
| CTAACCATCTCATCCATCCA+TGG | - | chr2_4:63130683-63130702 | Msa0341480:three_prime_UTR | 45.0% | |
| CAACTTTGAACCTCCATGGA+TGG | + | chr2_4:63130699-63130718 | None:intergenic | 45.0% | |
| CATCCATGGAGGTTCAAAGT+TGG | - | chr2_4:63130697-63130716 | Msa0341480:three_prime_UTR | 45.0% | |
| ATCCCAACTTTGAACCTCCA+TGG | + | chr2_4:63130703-63130722 | None:intergenic | 45.0% | |
| CACGTGTCTATGACACTTGT+TGG | - | chr2_4:63131098-63131117 | Msa0341480:intron | 45.0% | |
| GAATTCTATAGTGGCTGCAC+AGG | + | chr2_4:63131298-63131317 | None:intergenic | 45.0% | |
| ATGAGAGGATTCATTCTCGG+TGG | - | chr2_4:63131491-63131510 | Msa0341480:intron | 45.0% | |
| TGAGAGGATTCATTCTCGGT+GGG | - | chr2_4:63131492-63131511 | Msa0341480:intron | 45.0% | |
| ATATGCATTCGGCGATAACC+TGG | - | chr2_4:63131714-63131733 | Msa0341480:CDS | 45.0% | |
| ! | TAAACCTTTTCCCACGGCAT+AGG | - | chr2_4:63131925-63131944 | Msa0341480:intron | 45.0% |
| ! | AAACCTTTTCCCACGGCATA+GGG | - | chr2_4:63131926-63131945 | Msa0341480:intron | 45.0% |
| AGAATCTCTATCACGGCTTC+TGG | - | chr2_4:63132167-63132186 | Msa0341480:intron | 45.0% | |
| TGGCTAATACTTACTCCCTC+CGG | - | chr2_4:63132187-63132206 | Msa0341480:intron | 45.0% | |
| AGCTCAGTTGGATGAGCAAA+TGG | - | chr2_4:63132846-63132865 | Msa0341480:CDS | 45.0% | |
| TAAACTCACAGATGCAGGCT+TGG | - | chr2_4:63132974-63132993 | Msa0341480:intron | 45.0% | |
| AAACTCACAGATGCAGGCTT+GGG | - | chr2_4:63132975-63132994 | Msa0341480:intron | 45.0% | |
| ! | GAGAGAGGAGTATAACAGAG+GGG | - | chr2_4:63133335-63133354 | Msa0341480:intron | 45.0% |
| TCAAAACAGGGTGGACGAAT+AGG | + | chr2_4:63133433-63133452 | None:intergenic | 45.0% | |
| AGAAGTGGATCAACTGCAAC+GGG | + | chr2_4:63133483-63133502 | None:intergenic | 45.0% | |
| GAGAAGTGGATCAACTGCAA+CGG | + | chr2_4:63133484-63133503 | None:intergenic | 45.0% | |
| ! | AATTAGGTGACTAGCCAGAG+AGG | + | chr2_4:63133580-63133599 | None:intergenic | 45.0% |
| ! | TGATGGATGCACGCTCTTTA+AGG | + | chr2_4:63134092-63134111 | None:intergenic | 45.0% |
| TAACAACCTGTCCTGTACTG+CGG | + | chr2_4:63134116-63134135 | None:intergenic | 45.0% | |
| TAATAAGTGACGCACTCCAG+TGG | + | chr2_4:63134189-63134208 | None:intergenic | 45.0% | |
| TCACAAGCACAAGCAACACT+CGG | - | chr2_4:63134441-63134460 | Msa0341480:intron | 45.0% | |
| CCCAACAAGGGCAAGTATAA+TGG | + | chr2_4:63134860-63134879 | None:intergenic | 45.0% | |
| AATGCATACGGACCCAACAA+GGG | + | chr2_4:63134872-63134891 | None:intergenic | 45.0% | |
| AAATGCATACGGACCCAACA+AGG | + | chr2_4:63134873-63134892 | None:intergenic | 45.0% | |
| TACTTGTCTATTATGGGGGG+AGG | - | chr2_4:63134976-63134995 | Msa0341480:intron | 45.0% | |
| ACTTGTCTATTATGGGGGGA+GGG | - | chr2_4:63134977-63134996 | Msa0341480:intron | 45.0% | |
| !!! | TATTTTTTTAATGTTTTATT+TGG | - | chr2_4:63130842-63130861 | Msa0341480:CDS | 5.0% |
| !!! | AATATATTTTTTTGTTTTTT+AGG | - | chr2_4:63132766-63132785 | Msa0341480:CDS | 5.0% |
| !! | TTATAATAAATAATGTTATA+GGG | + | chr2_4:63133741-63133760 | None:intergenic | 5.0% |
| !! | TTATTATTTACTTATATATT+TGG | - | chr2_4:63134203-63134222 | Msa0341480:intron | 5.0% |
| ACCATCTCATCCATCCATGG+AGG | - | chr2_4:63130686-63130705 | Msa0341480:three_prime_UTR | 50.0% | |
| ACCTCCATGGATGGATGAGA+TGG | + | chr2_4:63130690-63130709 | None:intergenic | 50.0% | |
| TTGGGATTCCCTTCGCAAAC+AGG | - | chr2_4:63130716-63130735 | Msa0341480:three_prime_UTR | 50.0% | |
| GTGTGGTGGTATGGTACAGA+CGG | - | chr2_4:63131406-63131425 | Msa0341480:intron | 50.0% | |
| ATTCTCGGTGGGTGACTTAC+CGG | - | chr2_4:63131503-63131522 | Msa0341480:intron | 50.0% | |
| CATAAGTGGGGTTGACTGCA+TGG | - | chr2_4:63131577-63131596 | Msa0341480:intron | 50.0% | |
| GTACAAATCACTCGAGGCAG+AGG | + | chr2_4:63131682-63131701 | None:intergenic | 50.0% | |
| GAACATAGACCCTATGCCGT+GGG | + | chr2_4:63131938-63131957 | None:intergenic | 50.0% | |
| AGAACATAGACCCTATGCCG+TGG | + | chr2_4:63131939-63131958 | None:intergenic | 50.0% | |
| TGAGGCAACAGAGAGTGATC+TGG | - | chr2_4:63132912-63132931 | Msa0341480:intron | 50.0% | |
| ! | CAGAGAGTGATCTGGAGTCT+TGG | - | chr2_4:63132920-63132939 | Msa0341480:intron | 50.0% |
| AACCATTTCAGACCCACCAG+AGG | + | chr2_4:63133004-63133023 | None:intergenic | 50.0% | |
| ! | GACTAGCCAGAGAGGTTAGA+AGG | + | chr2_4:63133572-63133591 | None:intergenic | 50.0% |
| AAGCAACAGAGTAGGCCTGA+TGG | + | chr2_4:63133825-63133844 | None:intergenic | 50.0% | |
| !!! | TGCAGGAGTTTTATCGGCTC+CGG | - | chr2_4:63133956-63133975 | Msa0341480:intron | 50.0% |
| ! | TGGATGCACGCTCTTTAAGG+AGG | + | chr2_4:63134089-63134108 | None:intergenic | 50.0% |
| ACAGATGTCTGATCCACAGC+TGG | - | chr2_4:63134360-63134379 | Msa0341480:intron | 50.0% | |
| CAGATGTCTGATCCACAGCT+GGG | - | chr2_4:63134361-63134380 | Msa0341480:intron | 50.0% | |
| AGATGTCTGATCCACAGCTG+GGG | - | chr2_4:63134362-63134381 | Msa0341480:intron | 50.0% | |
| AAACAGAACAACCCCAGCTG+TGG | + | chr2_4:63134376-63134395 | None:intergenic | 50.0% | |
| ! | GTCTTCCAGCGTTCGACTTT+TGG | - | chr2_4:63134471-63134490 | Msa0341480:intron | 50.0% |
| ! | TTCCAGCGTTCGACTTTTGG+TGG | - | chr2_4:63134474-63134493 | Msa0341480:intron | 50.0% |
| ! | TCCAGCGTTCGACTTTTGGT+GGG | - | chr2_4:63134475-63134494 | Msa0341480:intron | 50.0% |
| ACAGCAATCATACCGTTGGG+AGG | + | chr2_4:63134533-63134552 | None:intergenic | 50.0% | |
| CTTGTCTATTATGGGGGGAG+GGG | - | chr2_4:63134978-63134997 | Msa0341480:intron | 50.0% | |
| GTCTGTGGCGTGTGAACAGA+CGG | - | chr2_4:63130643-63130662 | Msa0341480:three_prime_UTR | 55.0% | |
| ! | TGGCTCTGCAGTGACTGCTT+TGG | - | chr2_4:63131344-63131363 | Msa0341480:intron | 55.0% |
| ACTCGAGGCAGAGGAAGACA+TGG | + | chr2_4:63131673-63131692 | None:intergenic | 55.0% | |
| AGACCCTATGCCGTGGGAAA+AGG | + | chr2_4:63131932-63131951 | None:intergenic | 55.0% | |
| ! | GTCCTCTGGTGGGTCTGAAA+TGG | - | chr2_4:63132999-63133018 | Msa0341480:intron | 55.0% |
| CAACTGCAACGGGAGATCGA+CGG | + | chr2_4:63133473-63133492 | None:intergenic | 55.0% | |
| TCCCACCAAAAGTCGAACGC+TGG | + | chr2_4:63134479-63134498 | None:intergenic | 55.0% | |
| ATGCAGGCTTGGGTGTCCTC+TGG | - | chr2_4:63132985-63133004 | Msa0341480:intron | 60.0% | |
| AGGCTTGGGTGTCCTCTGGT+GGG | - | chr2_4:63132989-63133008 | Msa0341480:intron | 60.0% | |
| GCATCCATCAGCCGCAGTAC+AGG | - | chr2_4:63134102-63134121 | Msa0341480:intron | 60.0% | |
| CTGTCCTGTACTGCGGCTGA+TGG | + | chr2_4:63134109-63134128 | None:intergenic | 60.0% | |
| CATCAGCCGCAGTACAGGAC+AGG | - | chr2_4:63134107-63134126 | Msa0341480:intron | 60.0% | |
| AGCGGTGTGGTCGTCGTCTG+TGG | - | chr2_4:63130628-63130647 | Msa0341480:three_prime_UTR | 65.0% | |
| CAGGCTTGGGTGTCCTCTGG+TGG | - | chr2_4:63132988-63133007 | Msa0341480:intron | 65.0% | |
| CGTGAGCAGTCGCCTCCCAA+CGG | - | chr2_4:63134518-63134537 | Msa0341480:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_4 | gene | 63130567 | 63135175 | 63130567 | ID=Msa0341480;Name=Msa0341480 |
| chr2_4 | mRNA | 63130567 | 63135175 | 63130567 | ID=Msa0341480-mRNA-1;Parent=Msa0341480;Name=Msa0341480-mRNA-1;_AED=0.04;_eAED=0.04;_QI=135|1|1|1|1|1|5|251|223 |
| chr2_4 | exon | 63130567 | 63130931 | 63130567 | ID=Msa0341480-mRNA-1:exon:20135;Parent=Msa0341480-mRNA-1 |
| chr2_4 | exon | 63131203 | 63131316 | 63131203 | ID=Msa0341480-mRNA-1:exon:20134;Parent=Msa0341480-mRNA-1 |
| chr2_4 | exon | 63131614 | 63131781 | 63131614 | ID=Msa0341480-mRNA-1:exon:20133;Parent=Msa0341480-mRNA-1 |
| chr2_4 | exon | 63132671 | 63132910 | 63132671 | ID=Msa0341480-mRNA-1:exon:20132;Parent=Msa0341480-mRNA-1 |
| chr2_4 | exon | 63135005 | 63135175 | 63135005 | ID=Msa0341480-mRNA-1:exon:20131;Parent=Msa0341480-mRNA-1 |
| chr2_4 | five_prime_UTR | 63135041 | 63135175 | 63135041 | ID=Msa0341480-mRNA-1:five_prime_utr;Parent=Msa0341480-mRNA-1 |
| chr2_4 | CDS | 63135005 | 63135040 | 63135005 | ID=Msa0341480-mRNA-1:cds;Parent=Msa0341480-mRNA-1 |
| chr2_4 | CDS | 63132671 | 63132910 | 63132671 | ID=Msa0341480-mRNA-1:cds;Parent=Msa0341480-mRNA-1 |
| chr2_4 | CDS | 63131614 | 63131781 | 63131614 | ID=Msa0341480-mRNA-1:cds;Parent=Msa0341480-mRNA-1 |
| chr2_4 | CDS | 63131203 | 63131316 | 63131203 | ID=Msa0341480-mRNA-1:cds;Parent=Msa0341480-mRNA-1 |
| chr2_4 | CDS | 63130818 | 63130931 | 63130818 | ID=Msa0341480-mRNA-1:cds;Parent=Msa0341480-mRNA-1 |
| chr2_4 | three_prime_UTR | 63130567 | 63130817 | 63130567 | ID=Msa0341480-mRNA-1:three_prime_utr;Parent=Msa0341480-mRNA-1 |
| Gene Sequence |
| Protein sequence |
