Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0980140 | XP_003618910.1 | 94.136 | 324 | 14 | 4 | 1 | 322 | 1 | 321 | 0.0 | 569 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0980140 | sp|Q9LES3|AI5L2_ARATH | 58.333 | 324 | 106 | 7 | 1 | 322 | 1 | 297 | 3.20e-109 | 322 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0980140 | G7KP64 | 94.136 | 324 | 14 | 4 | 1 | 322 | 1 | 321 | 0.0 | 569 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0980140 | TF | bZIP |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0001450 | Msa0980140 | 0.805649 | 1.205287e-49 | -8.615850e-47 |
| Msa0003700 | Msa0980140 | 0.821922 | 3.121054e-53 | -8.615850e-47 |
| Msa0027230 | Msa0980140 | 0.802609 | 5.172410e-49 | -8.615850e-47 |
| Msa0027820 | Msa0980140 | 0.845701 | 3.445414e-59 | -8.615850e-47 |
| Msa0028420 | Msa0980140 | 0.802872 | 4.564216e-49 | -8.615850e-47 |
| Msa0030170 | Msa0980140 | 0.809152 | 2.179196e-50 | -8.615850e-47 |
| Msa0032920 | Msa0980140 | -0.831882 | 1.297194e-55 | -8.615850e-47 |
| Msa0032960 | Msa0980140 | -0.805827 | 1.106101e-49 | -8.615850e-47 |
| Msa0040690 | Msa0980140 | 0.809221 | 2.105966e-50 | -8.615850e-47 |
| Msa0051020 | Msa0980140 | 0.823304 | 1.488710e-53 | -8.615850e-47 |
| Msa0061340 | Msa0980140 | 0.806602 | 7.597496e-50 | -8.615850e-47 |
| Msa0063890 | Msa0980140 | 0.819946 | 8.893649e-53 | -8.615850e-47 |
| Msa0081520 | Msa0980140 | 0.835082 | 2.063488e-56 | -8.615850e-47 |
| Msa0092790 | Msa0980140 | 0.808235 | 3.421523e-50 | -8.615850e-47 |
| Msa0093850 | Msa0980140 | 0.826578 | 2.512361e-54 | -8.615850e-47 |
| Msa0101270 | Msa0980140 | 0.816211 | 6.216988e-52 | -8.615850e-47 |
| Msa0101440 | Msa0980140 | 0.820303 | 7.365061e-53 | -8.615850e-47 |
| Msa0108410 | Msa0980140 | 0.802505 | 5.435672e-49 | -8.615850e-47 |
| Msa0608320 | Msa0980140 | 0.846184 | 2.547600e-59 | -8.615850e-47 |
| Msa0614000 | Msa0980140 | 0.804657 | 1.944452e-49 | -8.615850e-47 |
| Msa0615710 | Msa0980140 | 0.808971 | 2.383057e-50 | -8.615850e-47 |
| Msa0626450 | Msa0980140 | 0.859050 | 5.405653e-63 | -8.615850e-47 |
| Msa0626490 | Msa0980140 | 0.859874 | 3.057536e-63 | -8.615850e-47 |
| Msa0638480 | Msa0980140 | 0.822575 | 2.201824e-53 | -8.615850e-47 |
| Msa0651550 | Msa0980140 | 0.815750 | 7.878576e-52 | -8.615850e-47 |
| Msa0661790 | Msa0980140 | 0.800707 | 1.269989e-48 | -8.615850e-47 |
| Msa0664600 | Msa0980140 | 0.856236 | 3.688689e-62 | -8.615850e-47 |
| Msa0669520 | Msa0980140 | 0.847078 | 1.451726e-59 | -8.615850e-47 |
| Msa0692980 | Msa0980140 | 0.822708 | 2.050526e-53 | -8.615850e-47 |
| Msa0693330 | Msa0980140 | 0.851445 | 8.835646e-61 | -8.615850e-47 |
| Msa0706230 | Msa0980140 | 0.822631 | 2.136679e-53 | -8.615850e-47 |
| Msa0707250 | Msa0980140 | 0.844122 | 9.193676e-59 | -8.615850e-47 |
| Msa0710800 | Msa0980140 | 0.814682 | 1.360824e-51 | -8.615850e-47 |
| Msa0720690 | Msa0980140 | 0.808627 | 2.822611e-50 | -8.615850e-47 |
| Msa0725000 | Msa0980140 | 0.841188 | 5.530408e-58 | -8.615850e-47 |
| Msa0725050 | Msa0980140 | 0.816332 | 5.840013e-52 | -8.615850e-47 |
| Msa0729100 | Msa0980140 | 0.809835 | 1.554987e-50 | -8.615850e-47 |
| Msa0730430 | Msa0980140 | 0.815874 | 7.390430e-52 | -8.615850e-47 |
| Msa0738040 | Msa0980140 | 0.819660 | 1.033487e-52 | -8.615850e-47 |
| Msa0755330 | Msa0980140 | 0.816392 | 5.662019e-52 | -8.615850e-47 |
| Msa0756490 | Msa0980140 | 0.805228 | 1.476923e-49 | -8.615850e-47 |
| Msa0760180 | Msa0980140 | 0.806396 | 8.395898e-50 | -8.615850e-47 |
| Msa0760250 | Msa0980140 | 0.808774 | 2.625845e-50 | -8.615850e-47 |
| Msa0765240 | Msa0980140 | 0.809761 | 1.612631e-50 | -8.615850e-47 |
| Msa0765270 | Msa0980140 | 0.842074 | 3.228159e-58 | -8.615850e-47 |
| Msa0765840 | Msa0980140 | 0.808592 | 2.871062e-50 | -8.615850e-47 |
| Msa0768990 | Msa0980140 | 0.806232 | 9.091935e-50 | -8.615850e-47 |
| Msa0770720 | Msa0980140 | 0.829044 | 6.415219e-55 | -8.615850e-47 |
| Msa0788770 | Msa0980140 | 0.804385 | 2.216234e-49 | -8.615850e-47 |
| Msa0806800 | Msa0980140 | 0.810690 | 1.016954e-50 | -8.615850e-47 |
| Msa0807260 | Msa0980140 | 0.813857 | 2.069507e-51 | -8.615850e-47 |
| Msa0807280 | Msa0980140 | 0.826240 | 3.023137e-54 | -8.615850e-47 |
| Msa0807820 | Msa0980140 | 0.825816 | 3.813736e-54 | -8.615850e-47 |
| Msa0808800 | Msa0980140 | 0.817011 | 4.113788e-52 | -8.615850e-47 |
| Msa0821760 | Msa0980140 | 0.819140 | 1.357638e-52 | -8.615850e-47 |
| Msa0823820 | Msa0980140 | 0.802618 | 5.151468e-49 | -8.615850e-47 |
| Msa0829330 | Msa0980140 | 0.809681 | 1.677956e-50 | -8.615850e-47 |
| Msa0832120 | Msa0980140 | 0.825418 | 4.738834e-54 | -8.615850e-47 |
| Msa0832340 | Msa0980140 | 0.813998 | 1.927082e-51 | -8.615850e-47 |
| Msa0833530 | Msa0980140 | 0.809934 | 1.480230e-50 | -8.615850e-47 |
| Msa0835490 | Msa0980140 | 0.822294 | 2.558680e-53 | -8.615850e-47 |
| Msa0124060 | Msa0980140 | 0.825164 | 5.442860e-54 | -8.615850e-47 |
| Msa0125660 | Msa0980140 | 0.805782 | 1.130630e-49 | -8.615850e-47 |
| Msa0136650 | Msa0980140 | 0.801843 | 7.435189e-49 | -8.615850e-47 |
| Msa0137990 | Msa0980140 | 0.801882 | 7.300033e-49 | -8.615850e-47 |
| Msa0138360 | Msa0980140 | 0.839718 | 1.340228e-57 | -8.615850e-47 |
| Msa0145580 | Msa0980140 | 0.819832 | 9.443372e-53 | -8.615850e-47 |
| Msa0147980 | Msa0980140 | 0.817627 | 2.989772e-52 | -8.615850e-47 |
| Msa0168500 | Msa0980140 | 0.840029 | 1.111911e-57 | -8.615850e-47 |
| Msa0168800 | Msa0980140 | 0.808809 | 2.580015e-50 | -8.615850e-47 |
| Msa0173890 | Msa0980140 | 0.825519 | 4.485801e-54 | -8.615850e-47 |
| Msa0174450 | Msa0980140 | 0.802780 | 4.768184e-49 | -8.615850e-47 |
| Msa0188350 | Msa0980140 | 0.838669 | 2.506931e-57 | -8.615850e-47 |
| Msa0188780 | Msa0980140 | 0.807463 | 4.993163e-50 | -8.615850e-47 |
| Msa0195630 | Msa0980140 | 0.814796 | 1.283320e-51 | -8.615850e-47 |
| Msa0204960 | Msa0980140 | 0.841010 | 6.157600e-58 | -8.615850e-47 |
| Msa0211150 | Msa0980140 | 0.858680 | 6.973929e-63 | -8.615850e-47 |
| Msa0214550 | Msa0980140 | 0.857197 | 1.923442e-62 | -8.615850e-47 |
| Msa0221000 | Msa0980140 | 0.812904 | 3.351605e-51 | -8.615850e-47 |
| Msa0225100 | Msa0980140 | 0.830145 | 3.462181e-55 | -8.615850e-47 |
| Msa0226460 | Msa0980140 | 0.811450 | 6.958188e-51 | -8.615850e-47 |
| Msa0231200 | Msa0980140 | 0.816046 | 6.765697e-52 | -8.615850e-47 |
| Msa0237410 | Msa0980140 | 0.801122 | 1.045160e-48 | -8.615850e-47 |
| Msa0237420 | Msa0980140 | 0.825844 | 3.756584e-54 | -8.615850e-47 |
| Msa0365100 | Msa0980140 | 0.816717 | 4.788220e-52 | -8.615850e-47 |
| Msa0367870 | Msa0980140 | 0.848434 | 6.145365e-60 | -8.615850e-47 |
| Msa0376630 | Msa0980140 | 0.830615 | 2.657520e-55 | -8.615850e-47 |
| Msa0378720 | Msa0980140 | 0.850541 | 1.588140e-60 | -8.615850e-47 |
| Msa0386850 | Msa0980140 | 0.813190 | 2.901873e-51 | -8.615850e-47 |
| Msa0395820 | Msa0980140 | 0.803894 | 2.803930e-49 | -8.615850e-47 |
| Msa0423750 | Msa0980140 | 0.803459 | 3.450850e-49 | -8.615850e-47 |
| Msa0427100 | Msa0980140 | 0.807352 | 5.272085e-50 | -8.615850e-47 |
| Msa0427120 | Msa0980140 | 0.809655 | 1.699979e-50 | -8.615850e-47 |
| Msa0430260 | Msa0980140 | 0.810692 | 1.015679e-50 | -8.615850e-47 |
| Msa0435420 | Msa0980140 | 0.803098 | 4.099842e-49 | -8.615850e-47 |
| Msa0440750 | Msa0980140 | 0.800877 | 1.172505e-48 | -8.615850e-47 |
| Msa0450400 | Msa0980140 | -0.833136 | 6.342600e-56 | -8.615850e-47 |
| Msa0453040 | Msa0980140 | 0.807527 | 4.838444e-50 | -8.615850e-47 |
| Msa0460590 | Msa0980140 | 0.824456 | 7.992503e-54 | -8.615850e-47 |
| Msa0464680 | Msa0980140 | 0.804802 | 1.813740e-49 | -8.615850e-47 |
| Msa0467490 | Msa0980140 | 0.819235 | 1.291628e-52 | -8.615850e-47 |
| Msa0473500 | Msa0980140 | 0.804689 | 1.914536e-49 | -8.615850e-47 |
| Msa0474730 | Msa0980140 | 0.834079 | 3.686639e-56 | -8.615850e-47 |
| Msa0479170 | Msa0980140 | 0.814292 | 1.659619e-51 | -8.615850e-47 |
| Msa0479200 | Msa0980140 | 0.804693 | 1.910699e-49 | -8.615850e-47 |
| Msa0980140 | Msa1020510 | 0.817042 | 4.047781e-52 | -8.615850e-47 |
| Msa0980140 | Msa1020670 | 0.840430 | 8.735227e-58 | -8.615850e-47 |
| Msa0980140 | Msa1023500 | 0.826708 | 2.339371e-54 | -8.615850e-47 |
| Msa0980140 | Msa1023570 | 0.808053 | 3.740838e-50 | -8.615850e-47 |
| Msa0980140 | Msa1043370 | 0.831582 | 1.538665e-55 | -8.615850e-47 |
| Msa0980140 | Msa1044680 | 0.817243 | 3.647650e-52 | -8.615850e-47 |
| Msa0980140 | Msa1045140 | 0.801859 | 7.381099e-49 | -8.615850e-47 |
| Msa0980140 | Msa1050910 | 0.800803 | 1.214194e-48 | -8.615850e-47 |
| Msa0980140 | Msa1051830 | 0.829522 | 4.911179e-55 | -8.615850e-47 |
| Msa0980140 | Msa1065390 | 0.819434 | 1.163730e-52 | -8.615850e-47 |
| Msa0980140 | Msa1079230 | 0.837859 | 4.053378e-57 | -8.615850e-47 |
| Msa0980140 | Msa1081930 | 0.811370 | 7.243496e-51 | -8.615850e-47 |
| Msa0980140 | Msa1089450 | 0.839313 | 1.707021e-57 | -8.615850e-47 |
| Msa0980140 | Msa1096970 | 0.829942 | 3.881175e-55 | -8.615850e-47 |
| Msa0980140 | Msa1101090 | 0.819491 | 1.129608e-52 | -8.615850e-47 |
| Msa0980140 | Msa1113340 | 0.820718 | 5.916528e-53 | -8.615850e-47 |
| Msa0980140 | Msa1124110 | 0.853884 | 1.778231e-61 | -8.615850e-47 |
| Msa0980140 | Msa1127590 | 0.800828 | 1.199902e-48 | -8.615850e-47 |
| Msa0980140 | Msa1128600 | 0.809973 | 1.451858e-50 | -8.615850e-47 |
| Msa0980140 | Msa1137570 | 0.807907 | 4.018374e-50 | -8.615850e-47 |
| Msa0980140 | Msa1140210 | 0.837434 | 5.210348e-57 | -8.615850e-47 |
| Msa0980140 | Msa1143650 | 0.821143 | 4.721715e-53 | -8.615850e-47 |
| Msa0980140 | Msa1145810 | 0.803952 | 2.727181e-49 | -8.615850e-47 |
| Msa0980140 | Msa1148910 | 0.801760 | 7.733171e-49 | -8.615850e-47 |
| Msa0980140 | Msa1151910 | 0.800871 | 1.175985e-48 | -8.615850e-47 |
| Msa0980140 | Msa1168950 | 0.835755 | 1.395404e-56 | -8.615850e-47 |
| Msa0980140 | Msa1169040 | 0.834277 | 3.290054e-56 | -8.615850e-47 |
| Msa0980140 | Msa1183120 | 0.831080 | 2.043909e-55 | -8.615850e-47 |
| Msa0980140 | Msa1189070 | 0.809623 | 1.726556e-50 | -8.615850e-47 |
| Msa0980140 | Msa1191180 | 0.814633 | 1.394693e-51 | -8.615850e-47 |
| Msa0980140 | Msa1199570 | 0.800171 | 1.633505e-48 | -8.615850e-47 |
| Msa0980140 | Msa1205280 | 0.811593 | 6.479321e-51 | -8.615850e-47 |
| Msa0980140 | Msa1209460 | 0.802833 | 4.650180e-49 | -8.615850e-47 |
| Msa0980140 | Msa1225700 | 0.838914 | 2.166231e-57 | -8.615850e-47 |
| Msa0980140 | Msa1229500 | 0.831701 | 1.437971e-55 | -8.615850e-47 |
| Msa0980140 | Msa1232740 | 0.802327 | 5.913685e-49 | -8.615850e-47 |
| Msa0980140 | Msa1244500 | 0.813437 | 2.561446e-51 | -8.615850e-47 |
| Msa0980140 | Msa1254730 | 0.807240 | 5.566508e-50 | -8.615850e-47 |
| Msa0980140 | Msa1262890 | 0.816267 | 6.040338e-52 | -8.615850e-47 |
| Msa0980140 | Msa1271130 | 0.812600 | 3.906822e-51 | -8.615850e-47 |
| Msa0980140 | Msa1271990 | 0.839987 | 1.140067e-57 | -8.615850e-47 |
| Msa0980140 | Msa1276660 | 0.805207 | 1.491989e-49 | -8.615850e-47 |
| Msa0980140 | Msa1284550 | 0.805580 | 1.246435e-49 | -8.615850e-47 |
| Msa0980140 | Msa1285550 | 0.823801 | 1.139278e-53 | -8.615850e-47 |
| Msa0980140 | Msa1286800 | 0.800803 | 1.214012e-48 | -8.615850e-47 |
| Msa0980140 | Msa1287190 | 0.808619 | 2.834092e-50 | -8.615850e-47 |
| Msa0980140 | Msa1297230 | 0.807692 | 4.463657e-50 | -8.615850e-47 |
| Msa0980140 | Msa1308220 | 0.803452 | 3.463318e-49 | -8.615850e-47 |
| Msa0980140 | Msa1328710 | 0.805954 | 1.040054e-49 | -8.615850e-47 |
| Msa0980140 | Msa1343430 | 0.808398 | 3.157793e-50 | -8.615850e-47 |
| Msa0980140 | Msa1345100 | 0.855440 | 6.302217e-62 | -8.615850e-47 |
| Msa0980140 | Msa1348090 | 0.801068 | 1.072152e-48 | -8.615850e-47 |
| Msa0980140 | Msa1353460 | 0.806732 | 7.129577e-50 | -8.615850e-47 |
| Msa0980140 | Msa1356830 | 0.800120 | 1.672645e-48 | -8.615850e-47 |
| Msa0980140 | Msa1360440 | 0.804578 | 2.020067e-49 | -8.615850e-47 |
| Msa0980140 | Msa1360980 | 0.810210 | 1.290948e-50 | -8.615850e-47 |
| Msa0980140 | Msa1369150 | 0.830642 | 2.617718e-55 | -8.615850e-47 |
| Msa0980140 | Msa1371520 | 0.838509 | 2.757487e-57 | -8.615850e-47 |
| Msa0980140 | Msa1374060 | 0.800351 | 1.501125e-48 | -8.615850e-47 |
| Msa0980140 | Msa1385890 | 0.818779 | 1.640005e-52 | -8.615850e-47 |
| Msa0980140 | Msa1393570 | 0.816080 | 6.648414e-52 | -8.615850e-47 |
| Msa0980140 | Msa1412530 | 0.807002 | 6.253485e-50 | -8.615850e-47 |
| Msa0980140 | Msa1418090 | 0.809375 | 1.951962e-50 | -8.615850e-47 |
| Msa0980140 | Msa1418240 | 0.832773 | 7.806351e-56 | -8.615850e-47 |
| Msa0980140 | Msa1419370 | 0.818215 | 2.201810e-52 | -8.615850e-47 |
| Msa0980140 | Msa1419690 | 0.805296 | 1.429889e-49 | -8.615850e-47 |
| Msa0980140 | Msa1422580 | 0.814888 | 1.225039e-51 | -8.615850e-47 |
| Msa0980140 | Msa1425880 | 0.802161 | 6.398199e-49 | -8.615850e-47 |
| Msa0980140 | Msa1429930 | 0.833939 | 3.996844e-56 | -8.615850e-47 |
| Msa0980140 | Msa1432500 | 0.822512 | 2.276492e-53 | -8.615850e-47 |
| Msa0980140 | Msa1434740 | 0.832118 | 1.134435e-55 | -8.615850e-47 |
| Msa0980140 | Msa1437940 | 0.824035 | 1.003561e-53 | -8.615850e-47 |
| Msa0980140 | Msa1440310 | 0.808083 | 3.687069e-50 | -8.615850e-47 |
| Msa0980140 | Msa1440960 | 0.845468 | 3.984837e-59 | -8.615850e-47 |
| Msa0980140 | Msa1446810 | 0.801829 | 7.486261e-49 | -8.615850e-47 |
| Msa0980140 | Msa1451160 | 0.806285 | 8.860402e-50 | -8.615850e-47 |
| Msa0980140 | Msa1464810 | 0.819643 | 1.042684e-52 | -8.615850e-47 |
| Msa0240900 | Msa0980140 | 0.832497 | 9.138569e-56 | -8.615850e-47 |
| Msa0249580 | Msa0980140 | 0.816967 | 4.208086e-52 | -8.615850e-47 |
| Msa0249860 | Msa0980140 | 0.829118 | 6.155038e-55 | -8.615850e-47 |
| Msa0255090 | Msa0980140 | 0.827391 | 1.605395e-54 | -8.615850e-47 |
| Msa0257490 | Msa0980140 | 0.816784 | 4.625197e-52 | -8.615850e-47 |
| Msa0259380 | Msa0980140 | 0.825323 | 4.991869e-54 | -8.615850e-47 |
| Msa0266180 | Msa0980140 | 0.820638 | 6.170925e-53 | -8.615850e-47 |
| Msa0267920 | Msa0980140 | 0.813858 | 2.069376e-51 | -8.615850e-47 |
| Msa0277850 | Msa0980140 | 0.853930 | 1.725250e-61 | -8.615850e-47 |
| Msa0279850 | Msa0980140 | 0.806070 | 9.832912e-50 | -8.615850e-47 |
| Msa0281530 | Msa0980140 | 0.859210 | 4.840764e-63 | -8.615850e-47 |
| Msa0287740 | Msa0980140 | 0.822723 | 2.033642e-53 | -8.615850e-47 |
| Msa0288080 | Msa0980140 | 0.840248 | 9.748686e-58 | -8.615850e-47 |
| Msa0290720 | Msa0980140 | 0.808954 | 2.402363e-50 | -8.615850e-47 |
| Msa0292400 | Msa0980140 | 0.840035 | 1.107765e-57 | -8.615850e-47 |
| Msa0294160 | Msa0980140 | 0.811921 | 5.496459e-51 | -8.615850e-47 |
| Msa0296250 | Msa0980140 | 0.818428 | 1.970525e-52 | -8.615850e-47 |
| Msa0296790 | Msa0980140 | 0.806627 | 7.505044e-50 | -8.615850e-47 |
| Msa0298780 | Msa0980140 | 0.810924 | 9.050960e-51 | -8.615850e-47 |
| Msa0300270 | Msa0980140 | 0.815392 | 9.463816e-52 | -8.615850e-47 |
| Msa0300320 | Msa0980140 | 0.811302 | 7.493548e-51 | -8.615850e-47 |
| Msa0300690 | Msa0980140 | 0.806958 | 6.387745e-50 | -8.615850e-47 |
| Msa0315980 | Msa0980140 | 0.830502 | 2.831992e-55 | -8.615850e-47 |
| Msa0317970 | Msa0980140 | 0.851054 | 1.139158e-60 | -8.615850e-47 |
| Msa0320590 | Msa0980140 | 0.845971 | 2.910982e-59 | -8.615850e-47 |
| Msa0321620 | Msa0980140 | 0.804409 | 2.190270e-49 | -8.615850e-47 |
| Msa0323270 | Msa0980140 | 0.820100 | 8.196529e-53 | -8.615850e-47 |
| Msa0326480 | Msa0980140 | 0.842268 | 2.868258e-58 | -8.615850e-47 |
| Msa0337700 | Msa0980140 | 0.804163 | 2.464497e-49 | -8.615850e-47 |
| Msa0339500 | Msa0980140 | 0.801837 | 7.457320e-49 | -8.615850e-47 |
| Msa0340380 | Msa0980140 | 0.802176 | 6.351794e-49 | -8.615850e-47 |
| Msa0341690 | Msa0980140 | 0.827156 | 1.827894e-54 | -8.615850e-47 |
| Msa0342310 | Msa0980140 | 0.800863 | 1.180240e-48 | -8.615850e-47 |
| Msa0357900 | Msa0980140 | 0.829730 | 4.370559e-55 | -8.615850e-47 |
| Msa0357990 | Msa0980140 | 0.843501 | 1.347710e-58 | -8.615850e-47 |
| Msa0485240 | Msa0980140 | 0.830054 | 3.644742e-55 | -8.615850e-47 |
| Msa0487420 | Msa0980140 | 0.800836 | 1.195645e-48 | -8.615850e-47 |
| Msa0518030 | Msa0980140 | 0.808115 | 3.628344e-50 | -8.615850e-47 |
| Msa0524500 | Msa0980140 | 0.805080 | 1.586313e-49 | -8.615850e-47 |
| Msa0526420 | Msa0980140 | 0.802736 | 4.869145e-49 | -8.615850e-47 |
| Msa0527020 | Msa0980140 | 0.824043 | 9.997265e-54 | -8.615850e-47 |
| Msa0527190 | Msa0980140 | 0.841806 | 3.800541e-58 | -8.615850e-47 |
| Msa0542290 | Msa0980140 | 0.814135 | 1.797091e-51 | -8.615850e-47 |
| Msa0556060 | Msa0980140 | 0.820876 | 5.439726e-53 | -8.615850e-47 |
| Msa0559870 | Msa0980140 | 0.804350 | 2.252806e-49 | -8.615850e-47 |
| Msa0569200 | Msa0980140 | 0.800047 | 1.730680e-48 | -8.615850e-47 |
| Msa0572840 | Msa0980140 | 0.831097 | 2.025249e-55 | -8.615850e-47 |
| Msa0575920 | Msa0980140 | 0.804957 | 1.683459e-49 | -8.615850e-47 |
| Msa0576790 | Msa0980140 | 0.810318 | 1.223342e-50 | -8.615850e-47 |
| Msa0597790 | Msa0980140 | 0.801978 | 6.977535e-49 | -8.615850e-47 |
| Msa0602460 | Msa0980140 | 0.804213 | 2.406025e-49 | -8.615850e-47 |
| Msa0845110 | Msa0980140 | 0.842970 | 1.867922e-58 | -8.615850e-47 |
| Msa0861510 | Msa0980140 | 0.806875 | 6.651761e-50 | -8.615850e-47 |
| Msa0861600 | Msa0980140 | 0.803501 | 3.383068e-49 | -8.615850e-47 |
| Msa0863010 | Msa0980140 | 0.801423 | 9.069009e-49 | -8.615850e-47 |
| Msa0866290 | Msa0980140 | 0.810867 | 9.310941e-51 | -8.615850e-47 |
| Msa0869780 | Msa0980140 | 0.800890 | 1.165667e-48 | -8.615850e-47 |
| Msa0875290 | Msa0980140 | 0.804523 | 2.073327e-49 | -8.615850e-47 |
| Msa0876310 | Msa0980140 | 0.800459 | 1.426919e-48 | -8.615850e-47 |
| Msa0877840 | Msa0980140 | 0.845679 | 3.493976e-59 | -8.615850e-47 |
| Msa0936380 | Msa0980140 | 0.816491 | 5.380293e-52 | -8.615850e-47 |
| Msa0938480 | Msa0980140 | 0.809524 | 1.813853e-50 | -8.615850e-47 |
| Msa0943440 | Msa0980140 | 0.910791 | 1.260745e-82 | -8.615850e-47 |
| Msa0945110 | Msa0980140 | 0.841438 | 4.751317e-58 | -8.615850e-47 |
| Msa0963270 | Msa0980140 | 0.807657 | 4.541460e-50 | -8.615850e-47 |
| Msa0967870 | Msa0980140 | 0.810138 | 1.337835e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0980140 | MtrunA17_Chr6g0460301 | 94.136 | 324 | 14 | 4 | 1 | 322 | 1 | 321 | 0.0 | 569 |
| Msa0980140 | MtrunA17_Chr7g0254991 | 63.142 | 331 | 102 | 9 | 1 | 322 | 1 | 320 | 2.60e-124 | 358 |
| Msa0980140 | MtrunA17_Chr8g0355121 | 50.814 | 307 | 134 | 5 | 16 | 322 | 24 | 313 | 1.26e-91 | 275 |
| Msa0980140 | MtrunA17_Chr3g0080341 | 48.810 | 336 | 144 | 8 | 1 | 322 | 1 | 322 | 2.87e-91 | 275 |
| Msa0980140 | MtrunA17_Chr4g0044771 | 35.965 | 342 | 143 | 10 | 16 | 295 | 18 | 345 | 1.00e-44 | 156 |
| Msa0980140 | MtrunA17_Chr3g0133971 | 47.097 | 155 | 68 | 5 | 2 | 156 | 14 | 154 | 3.41e-30 | 119 |
| Msa0980140 | MtrunA17_Chr3g0133971 | 65.574 | 61 | 20 | 1 | 237 | 297 | 339 | 398 | 1.80e-16 | 79.7 |
| Msa0980140 | MtrunA17_Chr2g0321411 | 33.916 | 286 | 134 | 11 | 20 | 294 | 12 | 253 | 2.30e-29 | 114 |
| Msa0980140 | MtrunA17_Chr2g0321381 | 36.986 | 292 | 140 | 11 | 17 | 294 | 23 | 284 | 2.76e-28 | 111 |
| Msa0980140 | MtrunA17_Chr5g0440841 | 44.828 | 145 | 70 | 3 | 1 | 143 | 6 | 142 | 2.03e-24 | 100 |
| Msa0980140 | MtrunA17_Chr5g0440841 | 54.023 | 87 | 39 | 1 | 236 | 322 | 184 | 269 | 1.14e-18 | 84.3 |
| Msa0980140 | MtrunA17_Chr7g0266211 | 38.060 | 134 | 72 | 2 | 22 | 144 | 45 | 178 | 2.29e-19 | 88.2 |
| Msa0980140 | MtrunA17_Chr5g0424871 | 27.181 | 298 | 166 | 9 | 16 | 273 | 12 | 298 | 5.00e-17 | 80.1 |
| Msa0980140 | MtrunA17_Chr5g0405951 | 64.912 | 57 | 8 | 1 | 251 | 295 | 166 | 222 | 2.77e-12 | 65.9 |
| Msa0980140 | MtrunA17_Chr4g0051101 | 54.098 | 61 | 27 | 1 | 235 | 295 | 115 | 174 | 6.63e-11 | 60.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0980140 | AT3G56850.1 | 58.333 | 324 | 106 | 7 | 1 | 322 | 1 | 297 | 3.25e-110 | 322 |
| Msa0980140 | AT2G41070.4 | 49.536 | 323 | 101 | 8 | 1 | 322 | 10 | 271 | 1.25e-82 | 251 |
| Msa0980140 | AT2G41070.3 | 49.536 | 323 | 101 | 8 | 1 | 322 | 1 | 262 | 1.56e-82 | 251 |
| Msa0980140 | AT2G41070.1 | 49.536 | 323 | 101 | 8 | 1 | 322 | 1 | 262 | 1.56e-82 | 251 |
| Msa0980140 | AT2G41070.2 | 49.536 | 323 | 101 | 8 | 1 | 322 | 1 | 262 | 1.56e-82 | 251 |
| Msa0980140 | AT2G41070.5 | 48.475 | 295 | 90 | 8 | 1 | 294 | 1 | 234 | 9.31e-69 | 215 |
| Msa0980140 | AT3G44460.1 | 38.721 | 297 | 124 | 11 | 15 | 293 | 34 | 290 | 2.35e-30 | 117 |
| Msa0980140 | AT1G49720.1 | 49.660 | 147 | 62 | 4 | 5 | 144 | 12 | 153 | 3.87e-30 | 118 |
| Msa0980140 | AT1G49720.1 | 54.348 | 92 | 32 | 4 | 235 | 317 | 297 | 387 | 6.33e-14 | 72.4 |
| Msa0980140 | AT1G49720.3 | 49.660 | 147 | 62 | 4 | 5 | 144 | 12 | 153 | 3.87e-30 | 118 |
| Msa0980140 | AT1G49720.3 | 54.348 | 92 | 32 | 4 | 235 | 317 | 297 | 387 | 6.33e-14 | 72.4 |
| Msa0980140 | AT1G49720.2 | 51.748 | 143 | 55 | 5 | 9 | 144 | 18 | 153 | 4.30e-30 | 118 |
| Msa0980140 | AT1G49720.2 | 61.194 | 67 | 24 | 2 | 235 | 300 | 297 | 362 | 3.14e-13 | 70.5 |
| Msa0980140 | AT3G19290.4 | 45.775 | 142 | 66 | 2 | 14 | 144 | 32 | 173 | 6.27e-28 | 112 |
| Msa0980140 | AT3G19290.4 | 47.126 | 87 | 43 | 1 | 212 | 295 | 310 | 396 | 3.34e-13 | 70.1 |
| Msa0980140 | AT3G19290.2 | 45.775 | 142 | 66 | 2 | 14 | 144 | 32 | 173 | 8.21e-28 | 112 |
| Msa0980140 | AT3G19290.1 | 45.775 | 142 | 66 | 2 | 14 | 144 | 32 | 173 | 8.90e-28 | 112 |
| Msa0980140 | AT3G19290.1 | 42.373 | 118 | 55 | 3 | 212 | 317 | 310 | 426 | 4.41e-13 | 70.1 |
| Msa0980140 | AT3G19290.5 | 45.775 | 142 | 66 | 2 | 14 | 144 | 32 | 173 | 8.90e-28 | 112 |
| Msa0980140 | AT3G19290.5 | 42.373 | 118 | 55 | 3 | 212 | 317 | 310 | 426 | 4.41e-13 | 70.1 |
| Msa0980140 | AT3G19290.3 | 45.775 | 142 | 66 | 2 | 14 | 144 | 32 | 173 | 8.90e-28 | 112 |
| Msa0980140 | AT3G19290.3 | 42.373 | 118 | 56 | 2 | 212 | 317 | 310 | 427 | 1.67e-13 | 71.2 |
| Msa0980140 | AT1G45249.1 | 43.373 | 166 | 65 | 7 | 16 | 161 | 21 | 177 | 3.79e-21 | 93.6 |
| Msa0980140 | AT1G45249.1 | 49.558 | 113 | 42 | 4 | 218 | 322 | 311 | 416 | 2.08e-17 | 82.8 |
| Msa0980140 | AT1G45249.3 | 43.373 | 166 | 65 | 7 | 16 | 161 | 21 | 177 | 4.37e-21 | 93.6 |
| Msa0980140 | AT1G45249.3 | 45.161 | 124 | 42 | 5 | 218 | 322 | 311 | 427 | 1.24e-14 | 74.7 |
| Msa0980140 | AT1G45249.7 | 43.373 | 166 | 65 | 7 | 16 | 161 | 36 | 192 | 4.44e-21 | 93.6 |
| Msa0980140 | AT1G45249.7 | 49.558 | 113 | 42 | 4 | 218 | 322 | 326 | 431 | 2.09e-17 | 82.8 |
| Msa0980140 | AT1G45249.6 | 43.373 | 166 | 65 | 7 | 16 | 161 | 36 | 192 | 4.44e-21 | 93.6 |
| Msa0980140 | AT1G45249.6 | 49.558 | 113 | 42 | 4 | 218 | 322 | 326 | 431 | 2.09e-17 | 82.8 |
| Msa0980140 | AT1G45249.10 | 43.373 | 166 | 65 | 7 | 16 | 161 | 21 | 177 | 5.10e-21 | 92.8 |
| Msa0980140 | AT1G45249.5 | 43.373 | 166 | 65 | 7 | 16 | 161 | 21 | 177 | 5.10e-21 | 92.8 |
| Msa0980140 | AT1G45249.4 | 46.429 | 140 | 57 | 5 | 16 | 144 | 21 | 153 | 6.89e-21 | 92.8 |
| Msa0980140 | AT1G45249.8 | 46.429 | 140 | 57 | 5 | 16 | 144 | 21 | 153 | 6.89e-21 | 92.8 |
| Msa0980140 | AT1G45249.2 | 46.429 | 140 | 57 | 5 | 16 | 144 | 21 | 153 | 6.89e-21 | 92.8 |
| Msa0980140 | AT1G45249.9 | 46.429 | 140 | 57 | 5 | 16 | 144 | 21 | 153 | 6.89e-21 | 92.8 |
| Msa0980140 | AT4G34000.1 | 38.690 | 168 | 63 | 6 | 13 | 144 | 24 | 187 | 2.12e-20 | 91.7 |
| Msa0980140 | AT4G34000.1 | 55.952 | 84 | 27 | 3 | 216 | 298 | 347 | 421 | 9.79e-18 | 84.0 |
| Msa0980140 | AT4G34000.4 | 38.690 | 168 | 63 | 6 | 13 | 144 | 24 | 187 | 2.12e-20 | 91.7 |
| Msa0980140 | AT4G34000.4 | 55.952 | 84 | 27 | 3 | 216 | 298 | 347 | 421 | 9.79e-18 | 84.0 |
| Msa0980140 | AT4G34000.2 | 38.690 | 168 | 63 | 6 | 13 | 144 | 24 | 187 | 2.12e-20 | 91.7 |
| Msa0980140 | AT4G34000.2 | 55.952 | 84 | 27 | 3 | 216 | 298 | 347 | 421 | 9.79e-18 | 84.0 |
| Msa0980140 | AT4G34000.3 | 38.690 | 168 | 63 | 6 | 13 | 144 | 24 | 187 | 2.28e-20 | 91.7 |
| Msa0980140 | AT4G34000.3 | 55.000 | 80 | 27 | 2 | 216 | 295 | 347 | 417 | 7.82e-18 | 84.3 |
| Msa0980140 | AT2G36270.1 | 55.556 | 90 | 29 | 2 | 236 | 315 | 342 | 430 | 2.41e-16 | 79.7 |
| Msa0980140 | AT2G36270.1 | 33.880 | 183 | 67 | 4 | 16 | 144 | 37 | 219 | 6.42e-16 | 78.6 |
| Msa0980140 | AT2G36270.2 | 55.556 | 90 | 29 | 2 | 236 | 315 | 342 | 430 | 2.41e-16 | 79.7 |
| Msa0980140 | AT2G36270.2 | 33.880 | 183 | 67 | 4 | 16 | 144 | 37 | 219 | 6.42e-16 | 78.6 |
| Msa0980140 | AT4G35900.1 | 50.000 | 94 | 44 | 2 | 229 | 322 | 195 | 285 | 3.35e-16 | 77.8 |
| Msa0980140 | AT2G36270.3 | 70.690 | 58 | 16 | 1 | 236 | 293 | 342 | 398 | 6.00e-16 | 78.6 |
| Msa0980140 | AT2G36270.3 | 33.880 | 183 | 67 | 4 | 16 | 144 | 37 | 219 | 1.18e-15 | 77.8 |
| Msa0980140 | AT5G44080.1 | 31.799 | 239 | 100 | 10 | 98 | 319 | 120 | 312 | 1.07e-15 | 77.0 |
| Msa0980140 | AT5G42910.1 | 38.636 | 132 | 54 | 3 | 16 | 143 | 20 | 128 | 1.70e-14 | 73.9 |
| Msa0980140 | AT2G17770.2 | 54.167 | 72 | 32 | 1 | 251 | 322 | 125 | 195 | 1.72e-14 | 71.2 |
| Msa0980140 | AT1G03970.1 | 28.632 | 234 | 104 | 9 | 98 | 319 | 85 | 267 | 1.35e-12 | 67.4 |
Find 98 sgRNAs with CRISPR-Local
Find 246 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAAAACCATCTTGGTAATTT+AGG | 0.046059 | 6_4:-18105494 | Msa0980140:CDS |
| AATATATTTGAGTCTAATTT+TGG | 0.122132 | 6_4:-18102308 | Msa0980140:three_prime_UTR |
| ATACAGATTGAAGTAGATTT+TGG | 0.173730 | 6_4:-18105673 | Msa0980140:five_prime_UTR |
| GATATCGCCATCTTCTTTAA+TGG | 0.187061 | 6_4:-18104928 | Msa0980140:CDS |
| AATCTACTTCAATCTGTATT+TGG | 0.194123 | 6_4:+18105677 | None:intergenic |
| CACAAACACTAGGTCGAAAA+AGG | 0.215282 | 6_4:-18104360 | Msa0980140:CDS |
| AAAACCATCTTGGTAATTTA+GGG | 0.238621 | 6_4:-18105493 | Msa0980140:CDS |
| GCTGGCGAGGTTTCGGATTT+CGG | 0.287074 | 6_4:-18105413 | Msa0980140:CDS |
| TTTAAAGGGTGGTTGAAAAT+TGG | 0.288161 | 6_4:+18105924 | None:intergenic |
| GATGACTTTGGAGGATTTCT+TGG | 0.296873 | 6_4:-18105198 | Msa0980140:CDS |
| GGAAGAAGAGGGGTGTTGAT+AGG | 0.304171 | 6_4:-18105259 | Msa0980140:CDS |
| TGAGATTGATTTCACTTTCC+AGG | 0.310878 | 6_4:-18105824 | Msa0980140:intron |
| CAAGGGAGTTTAACTTTGTC+TGG | 0.325021 | 6_4:-18105329 | Msa0980140:CDS |
| TGTTGAAGCTGGCGAGGTTT+CGG | 0.333824 | 6_4:-18105420 | Msa0980140:CDS |
| GGTTGCCGGGAATCAAGTTT+TGG | 0.343807 | 6_4:-18104958 | Msa0980140:CDS |
| GAACAAGTTTCTTTGATGTT+TGG | 0.353084 | 6_4:+18105852 | None:intergenic |
| TTTCGCAACATGGTCTTCAT+TGG | 0.353409 | 6_4:-18105082 | Msa0980140:CDS |
| ATATCGCCATCTTCTTTAAT+GGG | 0.357518 | 6_4:-18104927 | Msa0980140:intron |
| AGGATGATGGTGGTTTGTTA+AGG | 0.362877 | 6_4:-18105136 | Msa0980140:CDS |
| CAAAGACTTTACCTTTATCT+AGG | 0.373965 | 6_4:-18105553 | Msa0980140:CDS |
| TGCATCCAAAACTTGATTCC+CGG | 0.395693 | 6_4:+18104953 | None:intergenic |
| GAGCAAGATCAGTGTTCAAA+AGG | 0.400423 | 6_4:+18105963 | None:intergenic |
| GGCTCGGGTGGTGGCGCAGT+TGG | 0.406451 | 6_4:+18102708 | None:intergenic |
| GAAATAGAGTTATAGGTTTG+TGG | 0.412503 | 6_4:-18105625 | Msa0980140:five_prime_UTR |
| ACAAGTTCCGTTACAGTTGA+AGG | 0.412551 | 6_4:-18102569 | Msa0980140:three_prime_UTR |
| GAGGATTTCTTGGTGAAAGC+TGG | 0.421412 | 6_4:-18105188 | Msa0980140:CDS |
| GGATGATGGTGGTTTGTTAA+GGG | 0.422756 | 6_4:-18105135 | Msa0980140:CDS |
| GAAGAAGAGGGGTGTTGATA+GGG | 0.424019 | 6_4:-18105258 | Msa0980140:CDS |
| ACTTTACCTTTATCTAGGTC+AGG | 0.424724 | 6_4:-18105548 | Msa0980140:CDS |
| GTAGTTCGGTTGGTAAGTTA+AGG | 0.426810 | 6_4:+18102368 | None:intergenic |
| AAAGATCCTGACCTAGATAA+AGG | 0.429936 | 6_4:+18105542 | None:intergenic |
| TGATTCCCGGCAACCTGAAA+AGG | 0.430801 | 6_4:+18104966 | None:intergenic |
| GATGAAGTTCAAAACCATCT+TGG | 0.441683 | 6_4:-18105503 | Msa0980140:CDS |
| TCAGACTCGCGTAAGTAGTT+CGG | 0.443352 | 6_4:+18102354 | None:intergenic |
| TTGGTGAAAGCTGGAGTTGT+TGG | 0.447659 | 6_4:-18105179 | Msa0980140:CDS |
| TTTGAACCCGAGACCTCCTT+CGG | 0.453435 | 6_4:-18102395 | Msa0980140:three_prime_UTR |
| TAGTTCGGTTGGTAAGTTAA+GGG | 0.458943 | 6_4:+18102369 | None:intergenic |
| TTTCATAACAATAAGGATGA+TGG | 0.459884 | 6_4:-18105149 | Msa0980140:CDS |
| GCAGGCTTATACACAAGAAC+TGG | 0.460547 | 6_4:-18104138 | Msa0980140:intron |
| AGGGACACCGAAGGAGGTCT+CGG | 0.462239 | 6_4:+18102388 | None:intergenic |
| TTGATTCGAATGAGGATTCT+CGG | 0.469255 | 6_4:-18105112 | Msa0980140:CDS |
| CGGCAAAATGTTTCGCAACA+TGG | 0.482638 | 6_4:-18105092 | Msa0980140:CDS |
| AGTGATGTTGCTGCTGCTGC+TGG | 0.483550 | 6_4:-18105386 | Msa0980140:CDS |
| TCTTCATTGGATGCAATATC+CGG | 0.491078 | 6_4:-18105069 | Msa0980140:CDS |
| TGCAATCAATTCTCCACAGC+AGG | 0.494932 | 6_4:-18102526 | Msa0980140:three_prime_UTR |
| GACACTTGGTGAGATGACTT+TGG | 0.498834 | 6_4:-18105210 | Msa0980140:CDS |
| GTTTCCCTAAATTACCAAGA+TGG | 0.502080 | 6_4:+18105489 | None:intergenic |
| GTTGCAATGAAGACATCAAA+AGG | 0.505109 | 6_4:+18102653 | None:intergenic |
| CAACTTGGTTTGAGTTCACA+AGG | 0.505242 | 6_4:-18105347 | Msa0980140:CDS |
| CTGTCGAGAGGAGGCAAAAG+AGG | 0.507973 | 6_4:-18104309 | Msa0980140:CDS |
| AGAGGGGTGTTGATAGGGAT+AGG | 0.509576 | 6_4:-18105253 | Msa0980140:CDS |
| GCATGAACTGCCGCAAAACC+CGG | 0.510299 | 6_4:+18104999 | None:intergenic |
| GTATGAAAAGCATATGATGC+CGG | 0.511392 | 6_4:-18105018 | Msa0980140:CDS |
| GACACAGGATCATAGTTTGA+TGG | 0.513341 | 6_4:+18106016 | None:intergenic |
| GTTAAGGGTTGATTCGAATG+AGG | 0.514656 | 6_4:-18105120 | Msa0980140:CDS |
| GTTAGTAAAGTCACATATGT+AGG | 0.515424 | 6_4:+18102284 | None:intergenic |
| TTGAAAAGGGATTTAAAGGG+TGG | 0.520750 | 6_4:+18105913 | None:intergenic |
| AGTGTACCCATTAAAGAAGA+TGG | 0.532475 | 6_4:+18104921 | None:intergenic |
| TAAAGTTTCGCGTTTAGAAG+AGG | 0.534492 | 6_4:-18104111 | Msa0980140:CDS |
| AACCTGAAAAGGCTGTTGAA+TGG | 0.537317 | 6_4:+18104977 | None:intergenic |
| AGATATGCAAGGGAAGAAGA+GGG | 0.542486 | 6_4:-18105270 | Msa0980140:CDS |
| AGCAAGATCAGTGTTCAAAA+GGG | 0.547276 | 6_4:+18105964 | None:intergenic |
| GGGACACCGAAGGAGGTCTC+GGG | 0.548089 | 6_4:+18102389 | None:intergenic |
| AAGATATGCAAGGGAAGAAG+AGG | 0.548251 | 6_4:-18105271 | Msa0980140:CDS |
| ACTTGGTGAGATGACTTTGG+AGG | 0.554555 | 6_4:-18105207 | Msa0980140:CDS |
| ACAACTACCTTCAACTGTAA+CGG | 0.555695 | 6_4:+18102562 | None:intergenic |
| GTTGTCACAGGAGATAGAGA+AGG | 0.566153 | 6_4:-18102736 | Msa0980140:intron |
| AACATACAGCATAATCAACT+TGG | 0.566933 | 6_4:-18105362 | Msa0980140:CDS |
| CATAACAATAAGGATGATGG+TGG | 0.567397 | 6_4:-18105146 | Msa0980140:CDS |
| TATGAAAAGCATATGATGCC+GGG | 0.578298 | 6_4:-18105017 | Msa0980140:CDS |
| GTTGTTGCTGCTGAACAGAA+TGG | 0.584868 | 6_4:+18105045 | None:intergenic |
| AACAGATGCTCCACAGACAC+AGG | 0.595603 | 6_4:+18106001 | None:intergenic |
| GGTAATTTAGGGAAACCACT+TGG | 0.595722 | 6_4:-18105482 | Msa0980140:CDS |
| TCGTTCACGAGCAAGAAGAC+AGG | 0.598431 | 6_4:-18104260 | Msa0980140:intron |
| AAACTATGATCCTGTGTCTG+TGG | 0.598987 | 6_4:-18106011 | Msa0980140:five_prime_UTR |
| TAGTAAGAAAACTGTTGATG+AGG | 0.605589 | 6_4:-18105300 | Msa0980140:CDS |
| AGAAAACTGTTGATGAGGTG+TGG | 0.606026 | 6_4:-18105295 | Msa0980140:CDS |
| AGGTGTGGAAAGATATGCAA+GGG | 0.611551 | 6_4:-18105280 | Msa0980140:CDS |
| GATATGCAAGGGAAGAAGAG+GGG | 0.613310 | 6_4:-18105269 | Msa0980140:CDS |
| AGTGTGTGGAGTGTTGAAGC+TGG | 0.616392 | 6_4:-18105431 | Msa0980140:CDS |
| ATGAGTTGCTTAAGAGTGTG+TGG | 0.618901 | 6_4:-18105445 | Msa0980140:CDS |
| TAGAGAAAACTGTCGAGAGG+AGG | 0.623550 | 6_4:-18104318 | Msa0980140:CDS |
| TGCTGCTGAACAGAATGGAC+CGG | 0.626230 | 6_4:+18105050 | None:intergenic |
| TAGTAGAGAAAACTGTCGAG+AGG | 0.627657 | 6_4:-18104321 | Msa0980140:CDS |
| ACTCGCGTAAGTAGTTCGGT+TGG | 0.628074 | 6_4:+18102358 | None:intergenic |
| GTCACAGGAGATAGAGAAGG+AGG | 0.631775 | 6_4:-18102733 | Msa0980140:intron |
| TTTCTCTACTAAAATACCAG+AGG | 0.634525 | 6_4:+18104333 | None:intergenic |
| GTGGAGTGTTGAAGCTGGCG+AGG | 0.635886 | 6_4:-18105426 | Msa0980140:CDS |
| TCAAGATTCATACTTCCAAG+TGG | 0.648117 | 6_4:+18105467 | None:intergenic |
| GTTTAGAAGAGGAAAATGAA+AGG | 0.656611 | 6_4:-18104100 | Msa0980140:CDS |
| AAGTTAAGGGACACCGAAGG+AGG | 0.667902 | 6_4:+18102382 | None:intergenic |
| TTATCAGATACACAAACACT+AGG | 0.668593 | 6_4:-18104370 | Msa0980140:CDS |
| AACTTGGTTTGAGTTCACAA+GGG | 0.674938 | 6_4:-18105346 | Msa0980140:CDS |
| TAGTAGAATAGAGCCTGCTG+TGG | 0.689343 | 6_4:+18102513 | None:intergenic |
| GGCGAGGTTTCGGATTTCGG+CGG | 0.691722 | 6_4:-18105410 | Msa0980140:CDS |
| GGTAAGTTAAGGGACACCGA+AGG | 0.712130 | 6_4:+18102379 | None:intergenic |
| AGGATGCTGAATTAGTTCTG+CGG | 0.716972 | 6_4:+18102673 | None:intergenic |
| GAGGTGTGGAAAGATATGCA+AGG | 0.743009 | 6_4:-18105281 | Msa0980140:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | CAATAAAAAAAGATGAAATA+AGG | - | chr6_4:18103577-18103596 | Msa0980140:intron | 15.0% |
| !!! | AGAATATTATTGATAATAAC+TGG | + | chr6_4:18103849-18103868 | None:intergenic | 15.0% |
| !! | GTTATTATCAATAATATTCT+AGG | - | chr6_4:18103849-18103868 | Msa0980140:intron | 15.0% |
| !!! | AAGAAAAAAGAAAATTTTCT+TGG | - | chr6_4:18104351-18104370 | Msa0980140:CDS | 15.0% |
| !!! | AGAAAAAAGAAAATTTTCTT+GGG | - | chr6_4:18104352-18104371 | Msa0980140:CDS | 15.0% |
| !!! | TAAAGATTTTATATTTCCTT+TGG | - | chr6_4:18104528-18104547 | Msa0980140:intron | 15.0% |
| !!! | ATTACTTTTGAATATTGAAT+CGG | + | chr6_4:18104717-18104736 | None:intergenic | 15.0% |
| !! | TTATAGATATATATCTTCAA+GGG | + | chr6_4:18104936-18104955 | None:intergenic | 15.0% |
| !!! | AATATATTTGAGTCTAATTT+TGG | - | chr6_4:18105969-18105988 | Msa0980140:five_prime_UTR | 15.0% |
| !!! | TTTTTGAAAAGGGATTTAAA+GGG | + | chr6_4:18102370-18102389 | None:intergenic | 20.0% |
| !!! | TTTTTTGAAAAGGGATTTAA+AGG | + | chr6_4:18102371-18102390 | None:intergenic | 20.0% |
| !! | AAATTGTACCAAAAACAAAA+GGG | + | chr6_4:18102494-18102513 | None:intergenic | 20.0% |
| !! | AAAATTGTACCAAAAACAAA+AGG | + | chr6_4:18102495-18102514 | None:intergenic | 20.0% |
| !!! | TTCTTTGAAACTTTGTTTTT+TGG | - | chr6_4:18102550-18102569 | Msa0980140:three_prime_UTR | 20.0% |
| !!! | TGATTTTGAAATAGAGTTAT+AGG | - | chr6_4:18102645-18102664 | Msa0980140:three_prime_UTR | 20.0% |
| !!! | TGAATCTTTTCATAACAATA+AGG | - | chr6_4:18103121-18103140 | Msa0980140:intron | 20.0% |
| !!! | TTAAGTTGTTTATCCAAATA+GGG | + | chr6_4:18103517-18103536 | None:intergenic | 20.0% |
| !!! | ATTAAGTTGTTTATCCAAAT+AGG | + | chr6_4:18103518-18103537 | None:intergenic | 20.0% |
| !! | CCTTCAAAAAAAAATACTTA+GGG | + | chr6_4:18103779-18103798 | None:intergenic | 20.0% |
| !! | TCCTTCAAAAAAAAATACTT+AGG | + | chr6_4:18103780-18103799 | None:intergenic | 20.0% |
| !!! | AGCTTTATACAAAAGATTAA+GGG | + | chr6_4:18103810-18103829 | None:intergenic | 20.0% |
| !! | AAAAGAGGATGATAAAAAAT+AGG | - | chr6_4:18103983-18104002 | Msa0980140:intron | 20.0% |
| !! | AAAGAGGATGATAAAAAATA+GGG | - | chr6_4:18103984-18104003 | Msa0980140:intron | 20.0% |
| !! | AAAAGAATACATATTCATGA+AGG | + | chr6_4:18104228-18104247 | None:intergenic | 20.0% |
| !!! | CTATAACTTTCTAAGATATT+AGG | + | chr6_4:18104495-18104514 | None:intergenic | 20.0% |
| !! | GTTATAGATATATATCTTCA+AGG | + | chr6_4:18104937-18104956 | None:intergenic | 20.0% |
| !!! | TTTCTTGTTTGTTGATTTTT+CGG | - | chr6_4:18105119-18105138 | Msa0980140:CDS | 20.0% |
| !!! | TTTCTTTTCGATAAAATTCT+AGG | - | chr6_4:18105382-18105401 | Msa0980140:CDS | 20.0% |
| !!! | CTATCTAGAATGATATTTTA+TGG | + | chr6_4:18105494-18105513 | None:intergenic | 20.0% |
| !! | TGATATCATGAAAAAGAATA+AGG | + | chr6_4:18105655-18105674 | None:intergenic | 20.0% |
| !!! | CTTATTTTATAGACAAATGT+TGG | - | chr6_4:18105831-18105850 | Msa0980140:five_prime_UTR | 20.0% |
| !!! | ATCTTGCTCTTTTTTCTTTT+TGG | - | chr6_4:18102328-18102347 | Msa0980140:three_prime_UTR | 25.0% |
| !!! | TCTTGCTCTTTTTTCTTTTT+GGG | - | chr6_4:18102329-18102348 | Msa0980140:three_prime_UTR | 25.0% |
| !!! | AAGCATGCATTTTTTGAAAA+GGG | + | chr6_4:18102380-18102399 | None:intergenic | 25.0% |
| !!! | AAAGCATGCATTTTTTGAAA+AGG | + | chr6_4:18102381-18102400 | None:intergenic | 25.0% |
| ! | AATCTACTTCAATCTGTATT+TGG | + | chr6_4:18102603-18102622 | None:intergenic | 25.0% |
| !! | ATACAGATTGAAGTAGATTT+TGG | - | chr6_4:18102604-18102623 | Msa0980140:three_prime_UTR | 25.0% |
| !! | TACAGATTGAAGTAGATTTT+GGG | - | chr6_4:18102605-18102624 | Msa0980140:three_prime_UTR | 25.0% |
| ! | TGAAACTAGAGAAGAAAAAT+GGG | - | chr6_4:18102675-18102694 | Msa0980140:CDS | 25.0% |
| !! | AAAACCATCTTGGTAATTTA+GGG | - | chr6_4:18102784-18102803 | Msa0980140:intron | 25.0% |
| ! | TTTCATAACAATAAGGATGA+TGG | - | chr6_4:18103128-18103147 | Msa0980140:intron | 25.0% |
| !! | TTACTTTATTTCCTACTACT+AGG | - | chr6_4:18103434-18103453 | Msa0980140:intron | 25.0% |
| ! | AGACTCAAACCTAAATAAAA+GGG | + | chr6_4:18103488-18103507 | None:intergenic | 25.0% |
| ! | TAGACTCAAACCTAAATAAA+AGG | + | chr6_4:18103489-18103508 | None:intergenic | 25.0% |
| !!! | CCCTAAGTATTTTTTTTTGA+AGG | - | chr6_4:18103776-18103795 | Msa0980140:intron | 25.0% |
| !! | CAGCTTTATACAAAAGATTA+AGG | + | chr6_4:18103811-18103830 | None:intergenic | 25.0% |
| ! | GTATTAAGGAAATATCAACA+TGG | + | chr6_4:18104461-18104480 | None:intergenic | 25.0% |
| !! | GATTTTATATTTCCTTTGGT+TGG | - | chr6_4:18104532-18104551 | Msa0980140:intron | 25.0% |
| ! | TAAATAAACAAACCAACCAA+AGG | + | chr6_4:18104547-18104566 | None:intergenic | 25.0% |
| ! | TTAAAATGGAAACTTTGTCT+TGG | - | chr6_4:18104782-18104801 | Msa0980140:intron | 25.0% |
| ! | CTTGTTAAGGATTCAAAAAA+TGG | + | chr6_4:18104876-18104895 | None:intergenic | 25.0% |
| !!! | TTCTTGTTTGTTGATTTTTC+GGG | - | chr6_4:18105120-18105139 | Msa0980140:CDS | 25.0% |
| !! | TACTTAAGAGCATAAAACTT+AGG | - | chr6_4:18105177-18105196 | Msa0980140:CDS | 25.0% |
| ! | AACATAGAGTTATATAGCTT+AGG | + | chr6_4:18105252-18105271 | None:intergenic | 25.0% |
| ! | AAGCTATATAACTCTATGTT+AGG | - | chr6_4:18105252-18105271 | Msa0980140:CDS | 25.0% |
| !!! | TAGTTTGTAACTTTTGTTAG+AGG | - | chr6_4:18105410-18105429 | Msa0980140:CDS | 25.0% |
| !!! | TTAGTGTTTTGTTAGTTTCA+AGG | - | chr6_4:18105858-18105877 | Msa0980140:five_prime_UTR | 25.0% |
| !!! | TAGTGTTTTGTTAGTTTCAA+GGG | - | chr6_4:18105859-18105878 | Msa0980140:five_prime_UTR | 25.0% |
| TTTAAAGGGTGGTTGAAAAT+TGG | + | chr6_4:18102356-18102375 | None:intergenic | 30.0% | |
| GAACAAGTTTCTTTGATGTT+TGG | + | chr6_4:18102428-18102447 | None:intergenic | 30.0% | |
| !!! | TGTTCTAACCCTTTTGTTTT+TGG | - | chr6_4:18102483-18102502 | Msa0980140:three_prime_UTR | 30.0% |
| !! | GATTTTGGGTGATTTTGAAA+TGG | - | chr6_4:18102619-18102638 | Msa0980140:three_prime_UTR | 30.0% |
| GAAATAGAGTTATAGGTTTG+TGG | - | chr6_4:18102652-18102671 | Msa0980140:exon | 30.0% | |
| GTGAAACTAGAGAAGAAAAA+TGG | - | chr6_4:18102674-18102693 | Msa0980140:CDS | 30.0% | |
| GAAACTAGAGAAGAAAAATG+GGG | - | chr6_4:18102676-18102695 | Msa0980140:CDS | 30.0% | |
| CAAAGACTTTACCTTTATCT+AGG | - | chr6_4:18102724-18102743 | Msa0980140:CDS | 30.0% | |
| ! | CAAAACCATCTTGGTAATTT+AGG | - | chr6_4:18102783-18102802 | Msa0980140:intron | 30.0% |
| AACATACAGCATAATCAACT+TGG | - | chr6_4:18102915-18102934 | Msa0980140:intron | 30.0% | |
| TAGTAAGAAAACTGTTGATG+AGG | - | chr6_4:18102977-18102996 | Msa0980140:intron | 30.0% | |
| ATATCGCCATCTTCTTTAAT+GGG | - | chr6_4:18103350-18103369 | Msa0980140:intron | 30.0% | |
| !! | TCCTGATTTCCCTTTTATTT+AGG | - | chr6_4:18103476-18103495 | Msa0980140:intron | 30.0% |
| ACCTAAATAAAAGGGAAATC+AGG | + | chr6_4:18103480-18103499 | None:intergenic | 30.0% | |
| CAGCTTATATGAAAACAGAA+TGG | + | chr6_4:18103603-18103622 | None:intergenic | 30.0% | |
| ! | AAGCATTTGTGAGAATGTTT+TGG | + | chr6_4:18103716-18103735 | None:intergenic | 30.0% |
| TTATCAGATACACAAACACT+AGG | - | chr6_4:18103907-18103926 | Msa0980140:intron | 30.0% | |
| TTTCTCTACTAAAATACCAG+AGG | + | chr6_4:18103947-18103966 | None:intergenic | 30.0% | |
| !!! | GAAGTCCTGTTTGTTTTTTT+CGG | - | chr6_4:18104079-18104098 | Msa0980140:intron | 30.0% |
| TCAAACCGAAAAAAACAAAC+AGG | + | chr6_4:18104087-18104106 | None:intergenic | 30.0% | |
| GTTTAGAAGAGGAAAATGAA+AGG | - | chr6_4:18104177-18104196 | Msa0980140:intron | 30.0% | |
| ! | GTTTTCTGTAATGCATCAAT+TGG | + | chr6_4:18104428-18104447 | None:intergenic | 30.0% |
| AGGCATATCGATAAGTATTA+AGG | + | chr6_4:18104475-18104494 | None:intergenic | 30.0% | |
| GTTTGTTTATTTAGACAGAG+TGG | - | chr6_4:18104554-18104573 | Msa0980140:intron | 30.0% | |
| GAAAAACAACAGTAGTTAGT+AGG | + | chr6_4:18105103-18105122 | None:intergenic | 30.0% | |
| !!! | TGTTGATTTTTCGGGATAAT+TGG | - | chr6_4:18105128-18105147 | Msa0980140:CDS | 30.0% |
| ! | GAGCATAAAACTTAGGTTTT+TGG | - | chr6_4:18105184-18105203 | Msa0980140:CDS | 30.0% |
| ! | ATAACTCTATGTTAGGCTTT+TGG | - | chr6_4:18105259-18105278 | Msa0980140:CDS | 30.0% |
| GTTAGTAAAGTCACATATGT+AGG | + | chr6_4:18105996-18106015 | None:intergenic | 30.0% | |
| AGCAAGATCAGTGTTCAAAA+GGG | + | chr6_4:18102316-18102335 | None:intergenic | 35.0% | |
| TTGAAAAGGGATTTAAAGGG+TGG | + | chr6_4:18102367-18102386 | None:intergenic | 35.0% | |
| ! | TGAGATTGATTTCACTTTCC+AGG | - | chr6_4:18102453-18102472 | Msa0980140:three_prime_UTR | 35.0% |
| ! | GAAGCAGTTTTTGCATCTAA+AGG | + | chr6_4:18102533-18102552 | None:intergenic | 35.0% |
| ACTTTACCTTTATCTAGGTC+AGG | - | chr6_4:18102729-18102748 | Msa0980140:CDS | 35.0% | |
| AAAGATCCTGACCTAGATAA+AGG | + | chr6_4:18102738-18102757 | None:intergenic | 35.0% | |
| GATGAAGTTCAAAACCATCT+TGG | - | chr6_4:18102774-18102793 | Msa0980140:intron | 35.0% | |
| GTTTCCCTAAATTACCAAGA+TGG | + | chr6_4:18102791-18102810 | None:intergenic | 35.0% | |
| TCAAGATTCATACTTCCAAG+TGG | + | chr6_4:18102813-18102832 | None:intergenic | 35.0% | |
| ! | AACTTGGTTTGAGTTCACAA+GGG | - | chr6_4:18102931-18102950 | Msa0980140:intron | 35.0% |
| ! | CATAACAATAAGGATGATGG+TGG | - | chr6_4:18103131-18103150 | Msa0980140:intron | 35.0% |
| ! | TTGATTCGAATGAGGATTCT+CGG | - | chr6_4:18103165-18103184 | Msa0980140:intron | 35.0% |
| TCTTCATTGGATGCAATATC+CGG | - | chr6_4:18103208-18103227 | Msa0980140:intron | 35.0% | |
| ! | GTATGAAAAGCATATGATGC+CGG | - | chr6_4:18103259-18103278 | Msa0980140:intron | 35.0% |
| ! | TATGAAAAGCATATGATGCC+GGG | - | chr6_4:18103260-18103279 | Msa0980140:intron | 35.0% |
| GATATCGCCATCTTCTTTAA+TGG | - | chr6_4:18103349-18103368 | Msa0980140:intron | 35.0% | |
| AGTGTACCCATTAAAGAAGA+TGG | + | chr6_4:18103359-18103378 | None:intergenic | 35.0% | |
| GGGAAATCAGGAAAAGAATA+AGG | + | chr6_4:18103468-18103487 | None:intergenic | 35.0% | |
| TGAGTCTATGTATCCCTATT+TGG | - | chr6_4:18103501-18103520 | Msa0980140:intron | 35.0% | |
| ! | TCTGATAATGTACCTGTTGA+AGG | + | chr6_4:18103895-18103914 | None:intergenic | 35.0% |
| ACAAACACTAGGTCGAAAAA+GGG | - | chr6_4:18103918-18103937 | Msa0980140:intron | 35.0% | |
| ! | GTTATACTCTTTTCTCTGTG+AGG | - | chr6_4:18104039-18104058 | Msa0980140:intron | 35.0% |
| TGCACATTTCATTGGCATAT+GGG | + | chr6_4:18104122-18104141 | None:intergenic | 35.0% | |
| TATAAGCCTGCACATTTCAT+TGG | + | chr6_4:18104130-18104149 | None:intergenic | 35.0% | |
| TAAAGTTTCGCGTTTAGAAG+AGG | - | chr6_4:18104166-18104185 | Msa0980140:intron | 35.0% | |
| CATTACAGAAAACTCCACTT+TGG | - | chr6_4:18104435-18104454 | Msa0980140:intron | 35.0% | |
| AAATATCAACATGGCCAAAG+TGG | + | chr6_4:18104452-18104471 | None:intergenic | 35.0% | |
| GTTTATTTAGACAGAGTGGT+TGG | - | chr6_4:18104558-18104577 | Msa0980140:intron | 35.0% | |
| TTAAACCTCTTAACCCCTAA+GGG | + | chr6_4:18104766-18104785 | None:intergenic | 35.0% | |
| TTTAAACCTCTTAACCCCTA+AGG | + | chr6_4:18104767-18104786 | None:intergenic | 35.0% | |
| AGGGGTTAAGAGGTTTAAAA+TGG | - | chr6_4:18104768-18104787 | Msa0980140:intron | 35.0% | |
| TTCATCAAACTGTAAGACCT+CGG | - | chr6_4:18104978-18104997 | Msa0980140:CDS | 35.0% | |
| TACCAATAACATGTCGTCTA+TGG | - | chr6_4:18105033-18105052 | Msa0980140:CDS | 35.0% | |
| CTCTTAAGTAGAGACATGAA+TGG | + | chr6_4:18105167-18105186 | None:intergenic | 35.0% | |
| TTAACACAACCCTACAAAAC+CGG | - | chr6_4:18105208-18105227 | Msa0980140:CDS | 35.0% | |
| !!! | GCTTTGAAATCAGTTTTGTG+AGG | + | chr6_4:18105296-18105315 | None:intergenic | 35.0% |
| TCACTAATCAAAGTGAGACT+TGG | - | chr6_4:18105355-18105374 | Msa0980140:CDS | 35.0% | |
| CACTAATCAAAGTGAGACTT+GGG | - | chr6_4:18105356-18105375 | Msa0980140:CDS | 35.0% | |
| AGATAGTTCATCTCTACTCA+CGG | - | chr6_4:18105508-18105527 | Msa0980140:CDS | 35.0% | |
| !! | GGTAACATTTTTGTTGTCAC+AGG | - | chr6_4:18105529-18105548 | Msa0980140:CDS | 35.0% |
| GTTGCAATGAAGACATCAAA+AGG | + | chr6_4:18105627-18105646 | None:intergenic | 35.0% | |
| ACAACTACCTTCAACTGTAA+CGG | + | chr6_4:18105718-18105737 | None:intergenic | 35.0% | |
| !! | TAGTTCGGTTGGTAAGTTAA+GGG | + | chr6_4:18105911-18105930 | None:intergenic | 35.0% |
| GACACAGGATCATAGTTTGA+TGG | + | chr6_4:18102264-18102283 | None:intergenic | 40.0% | |
| AAACTATGATCCTGTGTCTG+TGG | - | chr6_4:18102266-18102285 | Msa0980140:three_prime_UTR | 40.0% | |
| GAGCAAGATCAGTGTTCAAA+AGG | + | chr6_4:18102317-18102336 | None:intergenic | 40.0% | |
| AGAAGAAAAATGGGGTCACA+AGG | - | chr6_4:18102684-18102703 | Msa0980140:CDS | 40.0% | |
| GGTAATTTAGGGAAACCACT+TGG | - | chr6_4:18102795-18102814 | Msa0980140:intron | 40.0% | |
| ! | ATGAGTTGCTTAAGAGTGTG+TGG | - | chr6_4:18102832-18102851 | Msa0980140:intron | 40.0% |
| ! | CAACTTGGTTTGAGTTCACA+AGG | - | chr6_4:18102930-18102949 | Msa0980140:intron | 40.0% |
| ! | CAAGGGAGTTTAACTTTGTC+TGG | - | chr6_4:18102948-18102967 | Msa0980140:intron | 40.0% |
| ! | AGAAAACTGTTGATGAGGTG+TGG | - | chr6_4:18102982-18103001 | Msa0980140:intron | 40.0% |
| AGGTGTGGAAAGATATGCAA+GGG | - | chr6_4:18102997-18103016 | Msa0980140:intron | 40.0% | |
| AAGATATGCAAGGGAAGAAG+AGG | - | chr6_4:18103006-18103025 | Msa0980140:intron | 40.0% | |
| AGATATGCAAGGGAAGAAGA+GGG | - | chr6_4:18103007-18103026 | Msa0980140:intron | 40.0% | |
| CGTGAAAAACAACAGACACT+TGG | - | chr6_4:18103053-18103072 | Msa0980140:intron | 40.0% | |
| ! | GATGACTTTGGAGGATTTCT+TGG | - | chr6_4:18103079-18103098 | Msa0980140:intron | 40.0% |
| !! | AGGATGATGGTGGTTTGTTA+AGG | - | chr6_4:18103141-18103160 | Msa0980140:intron | 40.0% |
| !! | GGATGATGGTGGTTTGTTAA+GGG | - | chr6_4:18103142-18103161 | Msa0980140:intron | 40.0% |
| !! | GTTAAGGGTTGATTCGAATG+AGG | - | chr6_4:18103157-18103176 | Msa0980140:intron | 40.0% |
| TTTCGCAACATGGTCTTCAT+TGG | - | chr6_4:18103195-18103214 | Msa0980140:intron | 40.0% | |
| AACCTGAAAAGGCTGTTGAA+TGG | + | chr6_4:18103303-18103322 | None:intergenic | 40.0% | |
| TGCATCCAAAACTTGATTCC+CGG | + | chr6_4:18103327-18103346 | None:intergenic | 40.0% | |
| AGGAACTTGATCCTAGTAGT+AGG | + | chr6_4:18103448-18103467 | None:intergenic | 40.0% | |
| !!! | GCTGCTTTTATTAGCTATCC+TGG | - | chr6_4:18103626-18103645 | Msa0980140:intron | 40.0% |
| ! | AATGTACCTGTTGAAGGTGT+GGG | + | chr6_4:18103889-18103908 | None:intergenic | 40.0% |
| TAATGTACCTGTTGAAGGTG+TGG | + | chr6_4:18103890-18103909 | None:intergenic | 40.0% | |
| CACAAACACTAGGTCGAAAA+AGG | - | chr6_4:18103917-18103936 | Msa0980140:intron | 40.0% | |
| TAGTAGAGAAAACTGTCGAG+AGG | - | chr6_4:18103956-18103975 | Msa0980140:intron | 40.0% | |
| !!! | GTTTTTTTCGGTTTGACACG+AGG | - | chr6_4:18104091-18104110 | Msa0980140:CDS | 40.0% |
| CTGCACATTTCATTGGCATA+TGG | + | chr6_4:18104123-18104142 | None:intergenic | 40.0% | |
| CATATGCCAATGAAATGTGC+AGG | - | chr6_4:18104121-18104140 | Msa0980140:CDS | 40.0% | |
| GGATTTCAAGCAATGAGAGT+TGG | - | chr6_4:18104579-18104598 | Msa0980140:intron | 40.0% | |
| TCAAGCAATGAGAGTTGGAA+TGG | - | chr6_4:18104584-18104603 | Msa0980140:intron | 40.0% | |
| ! | GACATAATCCCAAAAGTGCA+GGG | + | chr6_4:18104632-18104651 | None:intergenic | 40.0% |
| ! | TGACATAATCCCAAAAGTGC+AGG | + | chr6_4:18104633-18104652 | None:intergenic | 40.0% |
| AAATGCTAACAAGTGCCCTT+AGG | - | chr6_4:18104748-18104767 | Msa0980140:intron | 40.0% | |
| AATGCTAACAAGTGCCCTTA+GGG | - | chr6_4:18104749-18104768 | Msa0980140:intron | 40.0% | |
| GTCCATAGACGACATGTTAT+TGG | + | chr6_4:18105038-18105057 | None:intergenic | 40.0% | |
| !! | CCTTACAAACCGGTTTTGTA+GGG | + | chr6_4:18105220-18105239 | None:intergenic | 40.0% |
| !! | ACCTTACAAACCGGTTTTGT+AGG | + | chr6_4:18105221-18105240 | None:intergenic | 40.0% |
| GCATTCTTCACCTTACAAAC+CGG | + | chr6_4:18105230-18105249 | None:intergenic | 40.0% | |
| !! | CAGTTTTGTGAGGTTGTCTT+CGG | + | chr6_4:18105286-18105305 | None:intergenic | 40.0% |
| !! | AGGATGCTGAATTAGTTCTG+CGG | + | chr6_4:18105607-18105626 | None:intergenic | 40.0% |
| ACAAGTTCCGTTACAGTTGA+AGG | - | chr6_4:18105708-18105727 | Msa0980140:intron | 40.0% | |
| !! | GTAGTTCGGTTGGTAAGTTA+AGG | + | chr6_4:18105912-18105931 | None:intergenic | 40.0% |
| GGGTTAGAACAGAACATACC+TGG | + | chr6_4:18102474-18102493 | None:intergenic | 45.0% | |
| AGAAAAATGGGGTCACAAGG+TGG | - | chr6_4:18102687-18102706 | Msa0980140:CDS | 45.0% | |
| GAGGTGTGGAAAGATATGCA+AGG | - | chr6_4:18102996-18103015 | Msa0980140:intron | 45.0% | |
| GATATGCAAGGGAAGAAGAG+GGG | - | chr6_4:18103008-18103027 | Msa0980140:intron | 45.0% | |
| !! | GAAGAAGAGGGGTGTTGATA+GGG | - | chr6_4:18103019-18103038 | Msa0980140:intron | 45.0% |
| ! | GACACTTGGTGAGATGACTT+TGG | - | chr6_4:18103067-18103086 | Msa0980140:intron | 45.0% |
| ! | ACTTGGTGAGATGACTTTGG+AGG | - | chr6_4:18103070-18103089 | Msa0980140:intron | 45.0% |
| GAGGATTTCTTGGTGAAAGC+TGG | - | chr6_4:18103089-18103108 | Msa0980140:intron | 45.0% | |
| TTGGTGAAAGCTGGAGTTGT+TGG | - | chr6_4:18103098-18103117 | Msa0980140:intron | 45.0% | |
| CGGCAAAATGTTTCGCAACA+TGG | - | chr6_4:18103185-18103204 | Msa0980140:intron | 45.0% | |
| GTTGTTGCTGCTGAACAGAA+TGG | + | chr6_4:18103235-18103254 | None:intergenic | 45.0% | |
| ! | TGCCATTCAACAGCCTTTTC+AGG | - | chr6_4:18103298-18103317 | Msa0980140:intron | 45.0% |
| CATACTTCAACAAGCTCTCC+AGG | + | chr6_4:18103647-18103666 | None:intergenic | 45.0% | |
| AAAACTCCCACACCTTCAAC+AGG | - | chr6_4:18103880-18103899 | Msa0980140:intron | 45.0% | |
| TAGAGAAAACTGTCGAGAGG+AGG | - | chr6_4:18103959-18103978 | Msa0980140:intron | 45.0% | |
| ! | ACTCTTTTCTCTGTGAGGTG+TGG | - | chr6_4:18104044-18104063 | Msa0980140:intron | 45.0% |
| GCAGGCTTATACACAAGAAC+TGG | - | chr6_4:18104139-18104158 | Msa0980140:intron | 45.0% | |
| GCACTTTGTTCTGTGAGCTT+TGG | - | chr6_4:18104278-18104297 | Msa0980140:CDS | 45.0% | |
| ! | ATCAGAATGCCCTGCACTTT+TGG | - | chr6_4:18104620-18104639 | Msa0980140:intron | 45.0% |
| ! | TCAGAATGCCCTGCACTTTT+GGG | - | chr6_4:18104621-18104640 | Msa0980140:intron | 45.0% |
| ATGCTAACAAGTGCCCTTAG+GGG | - | chr6_4:18104750-18104769 | Msa0980140:intron | 45.0% | |
| !! | CACTTGAAGGGCACTTGTTA+AGG | + | chr6_4:18104889-18104908 | None:intergenic | 45.0% |
| CTTGCTAACAAGTGCCCTTA+GGG | + | chr6_4:18104912-18104931 | None:intergenic | 45.0% | |
| TCTTGCTAACAAGTGCCCTT+AGG | + | chr6_4:18104913-18104932 | None:intergenic | 45.0% | |
| TCGTCTATGGACCAACCATA+TGG | - | chr6_4:18105046-18105065 | Msa0980140:CDS | 45.0% | |
| TGGACCAACCATATGGTATG+TGG | - | chr6_4:18105053-18105072 | Msa0980140:CDS | 45.0% | |
| ACCAACCATATGGTATGTGG+TGG | - | chr6_4:18105056-18105075 | Msa0980140:CDS | 45.0% | |
| TCCACCACATACCATATGGT+TGG | + | chr6_4:18105060-18105079 | None:intergenic | 45.0% | |
| TCAGTCCACCACATACCATA+TGG | + | chr6_4:18105064-18105083 | None:intergenic | 45.0% | |
| !! | CCCTACAAAACCGGTTTGTA+AGG | - | chr6_4:18105217-18105236 | Msa0980140:CDS | 45.0% |
| GTTGTCACAGGAGATAGAGA+AGG | - | chr6_4:18105541-18105560 | Msa0980140:CDS | 45.0% | |
| !! | GTTCTGCGGAGCTGATTTTT+AGG | + | chr6_4:18105593-18105612 | None:intergenic | 45.0% |
| TGCAATCAATTCTCCACAGC+AGG | - | chr6_4:18105751-18105770 | Msa0980140:intron | 45.0% | |
| TAGTAGAATAGAGCCTGCTG+TGG | + | chr6_4:18105767-18105786 | None:intergenic | 45.0% | |
| TCAGACTCGCGTAAGTAGTT+CGG | + | chr6_4:18105926-18105945 | None:intergenic | 45.0% | |
| AACAGATGCTCCACAGACAC+AGG | + | chr6_4:18102279-18102298 | None:intergenic | 50.0% | |
| !! | AGTGTGTGGAGTGTTGAAGC+TGG | - | chr6_4:18102846-18102865 | Msa0980140:intron | 50.0% |
| TGTTGAAGCTGGCGAGGTTT+CGG | - | chr6_4:18102857-18102876 | Msa0980140:intron | 50.0% | |
| !! | GGAAGAAGAGGGGTGTTGAT+AGG | - | chr6_4:18103018-18103037 | Msa0980140:intron | 50.0% |
| !! | AGAGGGGTGTTGATAGGGAT+AGG | - | chr6_4:18103024-18103043 | Msa0980140:intron | 50.0% |
| TGCTGCTGAACAGAATGGAC+CGG | + | chr6_4:18103230-18103249 | None:intergenic | 50.0% | |
| ! | GCATATGATGCCGGGTTTTG+CGG | - | chr6_4:18103268-18103287 | Msa0980140:intron | 50.0% |
| !!! | CAACAGCCTTTTCAGGTTGC+CGG | - | chr6_4:18103305-18103324 | Msa0980140:intron | 50.0% |
| !!! | AACAGCCTTTTCAGGTTGCC+GGG | - | chr6_4:18103306-18103325 | Msa0980140:intron | 50.0% |
| TGATTCCCGGCAACCTGAAA+AGG | + | chr6_4:18103314-18103333 | None:intergenic | 50.0% | |
| ! | GGTTGCCGGGAATCAAGTTT+TGG | - | chr6_4:18103319-18103338 | Msa0980140:intron | 50.0% |
| TCGTTCACGAGCAAGAAGAC+AGG | - | chr6_4:18104017-18104036 | Msa0980140:intron | 50.0% | |
| AAGTGCCCTTAGGGGTTAAG+AGG | - | chr6_4:18104758-18104777 | Msa0980140:intron | 50.0% | |
| CTGTAAGACCTCGGAACAAG+CGG | - | chr6_4:18104987-18105006 | Msa0980140:CDS | 50.0% | |
| GTCACAGGAGATAGAGAAGG+AGG | - | chr6_4:18105544-18105563 | Msa0980140:CDS | 50.0% | |
| !! | TGATTTTTAGGCTCGGGTGG+TGG | + | chr6_4:18105581-18105600 | None:intergenic | 50.0% |
| !! | AGCTGATTTTTAGGCTCGGG+TGG | + | chr6_4:18105584-18105603 | None:intergenic | 50.0% |
| !! | CGGAGCTGATTTTTAGGCTC+GGG | + | chr6_4:18105587-18105606 | None:intergenic | 50.0% |
| !! | GCGGAGCTGATTTTTAGGCT+CGG | + | chr6_4:18105588-18105607 | None:intergenic | 50.0% |
| TTTGAACCCGAGACCTCCTT+CGG | - | chr6_4:18105882-18105901 | Msa0980140:five_prime_UTR | 50.0% | |
| AAGTTAAGGGACACCGAAGG+AGG | + | chr6_4:18105898-18105917 | None:intergenic | 50.0% | |
| GGTAAGTTAAGGGACACCGA+AGG | + | chr6_4:18105901-18105920 | None:intergenic | 50.0% | |
| ACTCGCGTAAGTAGTTCGGT+TGG | + | chr6_4:18105922-18105941 | None:intergenic | 50.0% | |
| GCTGGCGAGGTTTCGGATTT+CGG | - | chr6_4:18102864-18102883 | Msa0980140:intron | 55.0% | |
| AGTGATGTTGCTGCTGCTGC+TGG | - | chr6_4:18102891-18102910 | Msa0980140:intron | 55.0% | |
| GCATGAACTGCCGCAAAACC+CGG | + | chr6_4:18103281-18103300 | None:intergenic | 55.0% | |
| GGTCGAAAAAGGGTTGCCTC+TGG | - | chr6_4:18103928-18103947 | Msa0980140:intron | 55.0% | |
| CTGTCGAGAGGAGGCAAAAG+AGG | - | chr6_4:18103968-18103987 | Msa0980140:intron | 55.0% | |
| AGTGCCCTTCAAGTGCCCTA+AGG | - | chr6_4:18104894-18104913 | Msa0980140:intron | 55.0% | |
| GTGCCCTTCAAGTGCCCTAA+GGG | - | chr6_4:18104895-18104914 | Msa0980140:intron | 55.0% | |
| ! | GTGCCCTTAGGGCACTTGAA+GGG | + | chr6_4:18104901-18104920 | None:intergenic | 55.0% |
| ! | AGTGCCCTTAGGGCACTTGA+AGG | + | chr6_4:18104902-18104921 | None:intergenic | 55.0% |
| GCTATGTACCGCTTGTTCCG+AGG | + | chr6_4:18104998-18105017 | None:intergenic | 55.0% | |
| !! | GTGGAGTGTTGAAGCTGGCG+AGG | - | chr6_4:18102851-18102870 | Msa0980140:intron | 60.0% |
| GGCGAGGTTTCGGATTTCGG+CGG | - | chr6_4:18102867-18102886 | Msa0980140:intron | 60.0% | |
| AGGGACACCGAAGGAGGTCT+CGG | + | chr6_4:18105892-18105911 | None:intergenic | 60.0% | |
| GGGACACCGAAGGAGGTCTC+GGG | + | chr6_4:18105891-18105910 | None:intergenic | 65.0% | |
| ! | GGCTCGGGTGGTGGCGCAGT+TGG | + | chr6_4:18105572-18105591 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_4 | gene | 18102244 | 18106055 | 18102244 | ID=Msa0980140;Name=Msa0980140 |
| chr6_4 | mRNA | 18102244 | 18106055 | 18102244 | ID=Msa0980140-mRNA-1;Parent=Msa0980140;Name=Msa0980140-mRNA-1;_AED=0.04;_eAED=0.04;_QI=343|1|1|1|0.75|0.6|5|424|322 |
| chr6_4 | exon | 18102244 | 18102748 | 18102244 | ID=Msa0980140-mRNA-1:exon:5614;Parent=Msa0980140-mRNA-1 |
| chr6_4 | exon | 18104085 | 18104156 | 18104085 | ID=Msa0980140-mRNA-1:exon:5613;Parent=Msa0980140-mRNA-1 |
| chr6_4 | exon | 18104261 | 18104397 | 18104261 | ID=Msa0980140-mRNA-1:exon:5612;Parent=Msa0980140-mRNA-1 |
| chr6_4 | exon | 18104928 | 18105718 | 18104928 | ID=Msa0980140-mRNA-1:exon:5611;Parent=Msa0980140-mRNA-1 |
| chr6_4 | exon | 18105825 | 18106055 | 18105825 | ID=Msa0980140-mRNA-1:exon:5610;Parent=Msa0980140-mRNA-1 |
| chr6_4 | five_prime_UTR | 18105825 | 18106055 | 18105825 | ID=Msa0980140-mRNA-1:five_prime_utr;Parent=Msa0980140-mRNA-1 |
| chr6_4 | five_prime_UTR | 18105607 | 18105718 | 18105607 | ID=Msa0980140-mRNA-1:five_prime_utr;Parent=Msa0980140-mRNA-1 |
| chr6_4 | CDS | 18104928 | 18105606 | 18104928 | ID=Msa0980140-mRNA-1:cds;Parent=Msa0980140-mRNA-1 |
| chr6_4 | CDS | 18104261 | 18104397 | 18104261 | ID=Msa0980140-mRNA-1:cds;Parent=Msa0980140-mRNA-1 |
| chr6_4 | CDS | 18104085 | 18104156 | 18104085 | ID=Msa0980140-mRNA-1:cds;Parent=Msa0980140-mRNA-1 |
| chr6_4 | CDS | 18102668 | 18102748 | 18102668 | ID=Msa0980140-mRNA-1:cds;Parent=Msa0980140-mRNA-1 |
| chr6_4 | three_prime_UTR | 18102244 | 18102667 | 18102244 | ID=Msa0980140-mRNA-1:three_prime_utr;Parent=Msa0980140-mRNA-1 |
| Gene Sequence |
| Protein sequence |
