Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0710800 | AES97364.1 | 97.826 | 184 | 4 | 0 | 1 | 184 | 1 | 184 | 1.39e-126 | 363 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0710800 | sp|Q9C540|ACFR4_ARATH | 70.370 | 189 | 51 | 2 | 1 | 184 | 48 | 236 | 4.63e-84 | 251 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0710800 | G7JX24 | 97.826 | 184 | 4 | 0 | 1 | 184 | 1 | 184 | 6.62e-127 | 363 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0000050 | Msa0710800 | 0.807821 | 4.192290e-50 | -8.615850e-47 |
Msa0000190 | Msa0710800 | 0.812018 | 5.235329e-51 | -8.615850e-47 |
Msa0003700 | Msa0710800 | 0.827276 | 1.710924e-54 | -8.615850e-47 |
Msa0017510 | Msa0710800 | 0.846731 | 1.806132e-59 | -8.615850e-47 |
Msa0024550 | Msa0710800 | 0.833907 | 4.071803e-56 | -8.615850e-47 |
Msa0025330 | Msa0710800 | 0.804106 | 2.532917e-49 | -8.615850e-47 |
Msa0028420 | Msa0710800 | 0.803675 | 3.113110e-49 | -8.615850e-47 |
Msa0028640 | Msa0710800 | 0.804796 | 1.818685e-49 | -8.615850e-47 |
Msa0031340 | Msa0710800 | 0.837011 | 6.683298e-57 | -8.615850e-47 |
Msa0032920 | Msa0710800 | -0.833896 | 4.097705e-56 | -8.615850e-47 |
Msa0032960 | Msa0710800 | -0.827101 | 1.884522e-54 | -8.615850e-47 |
Msa0046100 | Msa0710800 | 0.802158 | 6.406941e-49 | -8.615850e-47 |
Msa0051020 | Msa0710800 | 0.809434 | 1.896273e-50 | -8.615850e-47 |
Msa0054690 | Msa0710800 | 0.800826 | 1.201336e-48 | -8.615850e-47 |
Msa0061340 | Msa0710800 | 0.807786 | 4.263803e-50 | -8.615850e-47 |
Msa0063890 | Msa0710800 | 0.833043 | 6.690130e-56 | -8.615850e-47 |
Msa0069330 | Msa0710800 | 0.805118 | 1.557774e-49 | -8.615850e-47 |
Msa0072900 | Msa0710800 | 0.800916 | 1.151554e-48 | -8.615850e-47 |
Msa0074240 | Msa0710800 | 0.817035 | 4.063406e-52 | -8.615850e-47 |
Msa0081050 | Msa0710800 | 0.802174 | 6.356729e-49 | -8.615850e-47 |
Msa0081520 | Msa0710800 | 0.838261 | 3.194644e-57 | -8.615850e-47 |
Msa0089630 | Msa0710800 | 0.824308 | 8.659949e-54 | -8.615850e-47 |
Msa0092790 | Msa0710800 | 0.812231 | 4.703886e-51 | -8.615850e-47 |
Msa0094850 | Msa0710800 | 0.814969 | 1.174962e-51 | -8.615850e-47 |
Msa0101270 | Msa0710800 | 0.811025 | 8.604481e-51 | -8.615850e-47 |
Msa0101440 | Msa0710800 | 0.833967 | 3.933478e-56 | -8.615850e-47 |
Msa0104550 | Msa0710800 | 0.806041 | 9.973981e-50 | -8.615850e-47 |
Msa0110970 | Msa0710800 | 0.822035 | 2.938457e-53 | -8.615850e-47 |
Msa0114060 | Msa0710800 | 0.802429 | 5.634172e-49 | -8.615850e-47 |
Msa0118570 | Msa0710800 | 0.814613 | 1.409372e-51 | -8.615850e-47 |
Msa0120400 | Msa0710800 | 0.835723 | 1.421101e-56 | -8.615850e-47 |
Msa0602870 | Msa0710800 | 0.801896 | 7.253899e-49 | -8.615850e-47 |
Msa0615710 | Msa0710800 | 0.828234 | 1.006725e-54 | -8.615850e-47 |
Msa0616220 | Msa0710800 | 0.809918 | 1.492434e-50 | -8.615850e-47 |
Msa0623330 | Msa0710800 | 0.821054 | 4.949765e-53 | -8.615850e-47 |
Msa0626450 | Msa0710800 | 0.870182 | 1.769552e-66 | -8.615850e-47 |
Msa0626490 | Msa0710800 | 0.868670 | 5.492683e-66 | -8.615850e-47 |
Msa0626510 | Msa0710800 | 0.814787 | 1.289223e-51 | -8.615850e-47 |
Msa0627450 | Msa0710800 | 0.803466 | 3.440261e-49 | -8.615850e-47 |
Msa0637560 | Msa0710800 | 0.802033 | 6.798169e-49 | -8.615850e-47 |
Msa0638480 | Msa0710800 | 0.805334 | 1.403402e-49 | -8.615850e-47 |
Msa0639430 | Msa0710800 | 0.805676 | 1.189957e-49 | -8.615850e-47 |
Msa0643890 | Msa0710800 | 0.810164 | 1.320461e-50 | -8.615850e-47 |
Msa0663300 | Msa0710800 | 0.803216 | 3.874432e-49 | -8.615850e-47 |
Msa0663390 | Msa0710800 | 0.815496 | 8.973035e-52 | -8.615850e-47 |
Msa0664600 | Msa0710800 | 0.868271 | 7.393010e-66 | -8.615850e-47 |
Msa0677410 | Msa0710800 | 0.841614 | 4.269966e-58 | -8.615850e-47 |
Msa0682330 | Msa0710800 | 0.811805 | 5.824473e-51 | -8.615850e-47 |
Msa0683570 | Msa0710800 | 0.827181 | 1.803015e-54 | -8.615850e-47 |
Msa0693010 | Msa0710800 | -0.811733 | 6.039428e-51 | -8.615850e-47 |
Msa0702590 | Msa0710800 | 0.800894 | 1.163220e-48 | -8.615850e-47 |
Msa0708520 | Msa0710800 | 0.805607 | 1.230072e-49 | -8.615850e-47 |
Msa0710800 | Msa0725000 | 0.823095 | 1.665294e-53 | -8.615850e-47 |
Msa0710800 | Msa0727640 | 0.820293 | 7.405392e-53 | -8.615850e-47 |
Msa0710800 | Msa0729490 | 0.871675 | 5.705749e-67 | -8.615850e-47 |
Msa0710800 | Msa0729720 | 0.810565 | 1.082229e-50 | -8.615850e-47 |
Msa0710800 | Msa0730430 | 0.807272 | 5.480453e-50 | -8.615850e-47 |
Msa0710800 | Msa0741240 | 0.812425 | 4.268162e-51 | -8.615850e-47 |
Msa0710800 | Msa0765270 | 0.818100 | 2.337405e-52 | -8.615850e-47 |
Msa0710800 | Msa0765910 | 0.819596 | 1.068802e-52 | -8.615850e-47 |
Msa0710800 | Msa0767300 | 0.815457 | 9.154591e-52 | -8.615850e-47 |
Msa0710800 | Msa0769180 | 0.820861 | 5.482667e-53 | -8.615850e-47 |
Msa0710800 | Msa0770080 | 0.812574 | 3.958472e-51 | -8.615850e-47 |
Msa0710800 | Msa0770720 | 0.848586 | 5.578973e-60 | -8.615850e-47 |
Msa0710800 | Msa0785210 | 0.800365 | 1.491623e-48 | -8.615850e-47 |
Msa0710800 | Msa0807260 | 0.896982 | 2.185175e-76 | -8.615850e-47 |
Msa0710800 | Msa0807280 | 0.826183 | 3.120406e-54 | -8.615850e-47 |
Msa0710800 | Msa0807810 | 0.823519 | 1.326082e-53 | -8.615850e-47 |
Msa0710800 | Msa0807820 | 0.829683 | 4.487021e-55 | -8.615850e-47 |
Msa0710800 | Msa0821760 | 0.816774 | 4.650763e-52 | -8.615850e-47 |
Msa0710800 | Msa0826130 | 0.816973 | 4.194587e-52 | -8.615850e-47 |
Msa0710800 | Msa0828560 | 0.820937 | 5.266086e-53 | -8.615850e-47 |
Msa0710800 | Msa0829330 | 0.807400 | 5.149001e-50 | -8.615850e-47 |
Msa0710800 | Msa0833650 | 0.801590 | 8.380942e-49 | -8.615850e-47 |
Msa0710800 | Msa0838580 | 0.801058 | 1.076904e-48 | -8.615850e-47 |
Msa0710800 | Msa0845110 | 0.821633 | 3.640626e-53 | -8.615850e-47 |
Msa0710800 | Msa0861510 | 0.842904 | 1.944259e-58 | -8.615850e-47 |
Msa0710800 | Msa0861530 | 0.822113 | 2.817675e-53 | -8.615850e-47 |
Msa0710800 | Msa0861600 | 0.838110 | 3.494127e-57 | -8.615850e-47 |
Msa0710800 | Msa0861870 | 0.830344 | 3.096985e-55 | -8.615850e-47 |
Msa0710800 | Msa0866270 | 0.898652 | 4.302607e-77 | -8.615850e-47 |
Msa0710800 | Msa0866520 | 0.821065 | 4.922941e-53 | -8.615850e-47 |
Msa0710800 | Msa0871270 | 0.808493 | 3.015083e-50 | -8.615850e-47 |
Msa0710800 | Msa0875290 | 0.823037 | 1.718742e-53 | -8.615850e-47 |
Msa0710800 | Msa0876190 | 0.800919 | 1.149505e-48 | -8.615850e-47 |
Msa0710800 | Msa0880140 | 0.841382 | 4.914966e-58 | -8.615850e-47 |
Msa0710800 | Msa0880780 | 0.802820 | 4.679117e-49 | -8.615850e-47 |
Msa0710800 | Msa0884410 | -0.814465 | 1.519872e-51 | -8.615850e-47 |
Msa0710800 | Msa0893800 | 0.817059 | 4.013505e-52 | -8.615850e-47 |
Msa0710800 | Msa0897330 | 0.807716 | 4.412099e-50 | -8.615850e-47 |
Msa0710800 | Msa0938210 | 0.803150 | 3.998351e-49 | -8.615850e-47 |
Msa0710800 | Msa0938220 | 0.818940 | 1.507986e-52 | -8.615850e-47 |
Msa0710800 | Msa0945110 | 0.826609 | 2.470066e-54 | -8.615850e-47 |
Msa0710800 | Msa0960600 | 0.813166 | 2.936542e-51 | -8.615850e-47 |
Msa0710800 | Msa0963270 | 0.802018 | 6.845963e-49 | -8.615850e-47 |
Msa0710800 | Msa0966400 | 0.803863 | 2.845295e-49 | -8.615850e-47 |
Msa0710800 | Msa0967380 | 0.820495 | 6.657051e-53 | -8.615850e-47 |
Msa0710800 | Msa0967870 | 0.839040 | 2.009486e-57 | -8.615850e-47 |
Msa0710800 | Msa0972100 | 0.824549 | 7.598748e-54 | -8.615850e-47 |
Msa0710800 | Msa0975340 | 0.807322 | 5.349641e-50 | -8.615850e-47 |
Msa0710800 | Msa0980140 | 0.814682 | 1.360824e-51 | -8.615850e-47 |
Msa0710800 | Msa1004550 | 0.808915 | 2.449177e-50 | -8.615850e-47 |
Msa0710800 | Msa1005870 | 0.837642 | 4.609133e-57 | -8.615850e-47 |
Msa0710800 | Msa1009660 | 0.812306 | 4.531076e-51 | -8.615850e-47 |
Msa0710800 | Msa1013400 | 0.803205 | 3.896505e-49 | -8.615850e-47 |
Msa0710800 | Msa1019000 | 0.807067 | 6.056971e-50 | -8.615850e-47 |
Msa0710800 | Msa1019430 | 0.862965 | 3.486310e-64 | -8.615850e-47 |
Msa0710800 | Msa1019470 | 0.830633 | 2.631309e-55 | -8.615850e-47 |
Msa0710800 | Msa1020510 | 0.845370 | 4.236216e-59 | -8.615850e-47 |
Msa0710800 | Msa1020670 | 0.853373 | 2.494346e-61 | -8.615850e-47 |
Msa0710800 | Msa1023500 | 0.817486 | 3.216788e-52 | -8.615850e-47 |
Msa0710800 | Msa1031930 | 0.828777 | 7.445156e-55 | -8.615850e-47 |
Msa0710800 | Msa1040400 | 0.800526 | 1.382906e-48 | -8.615850e-47 |
Msa0710800 | Msa1043370 | 0.833497 | 5.155177e-56 | -8.615850e-47 |
Msa0710800 | Msa1044680 | 0.805211 | 1.489405e-49 | -8.615850e-47 |
Msa0710800 | Msa1045140 | 0.836411 | 9.504844e-57 | -8.615850e-47 |
Msa0710800 | Msa1047870 | 0.803050 | 4.193868e-49 | -8.615850e-47 |
Msa0710800 | Msa1047980 | 0.804680 | 1.923341e-49 | -8.615850e-47 |
Msa0710800 | Msa1051830 | 0.840641 | 7.694332e-58 | -8.615850e-47 |
Msa0710800 | Msa1065390 | 0.813709 | 2.230987e-51 | -8.615850e-47 |
Msa0710800 | Msa1078170 | 0.823300 | 1.492061e-53 | -8.615850e-47 |
Msa0710800 | Msa1084960 | 0.800228 | 1.590003e-48 | -8.615850e-47 |
Msa0710800 | Msa1085200 | 0.841386 | 4.904083e-58 | -8.615850e-47 |
Msa0710800 | Msa1092010 | 0.838001 | 3.726841e-57 | -8.615850e-47 |
Msa0710800 | Msa1096970 | 0.846322 | 2.335530e-59 | -8.615850e-47 |
Msa0710800 | Msa1113170 | 0.803195 | 3.913657e-49 | -8.615850e-47 |
Msa0710800 | Msa1113800 | 0.812551 | 4.005138e-51 | -8.615850e-47 |
Msa0710800 | Msa1121440 | 0.803283 | 3.753453e-49 | -8.615850e-47 |
Msa0710800 | Msa1123380 | 0.847113 | 1.419976e-59 | -8.615850e-47 |
Msa0710800 | Msa1124110 | 0.819335 | 1.225837e-52 | -8.615850e-47 |
Msa0710800 | Msa1125000 | 0.812595 | 3.917808e-51 | -8.615850e-47 |
Msa0710800 | Msa1135390 | 0.805499 | 1.296296e-49 | -8.615850e-47 |
Msa0710800 | Msa1137570 | 0.821723 | 3.469374e-53 | -8.615850e-47 |
Msa0710800 | Msa1140210 | 0.866884 | 2.056571e-65 | -8.615850e-47 |
Msa0710800 | Msa1142020 | 0.817088 | 3.952146e-52 | -8.615850e-47 |
Msa0710800 | Msa1147280 | 0.800860 | 1.182217e-48 | -8.615850e-47 |
Msa0710800 | Msa1147900 | 0.801171 | 1.021166e-48 | -8.615850e-47 |
Msa0710800 | Msa1151910 | 0.827654 | 1.388305e-54 | -8.615850e-47 |
Msa0710800 | Msa1168160 | 0.801109 | 1.051411e-48 | -8.615850e-47 |
Msa0710800 | Msa1181190 | 0.800675 | 1.289426e-48 | -8.615850e-47 |
Msa0710800 | Msa1182860 | 0.802837 | 4.640745e-49 | -8.615850e-47 |
Msa0710800 | Msa1189070 | 0.809478 | 1.854866e-50 | -8.615850e-47 |
Msa0710800 | Msa1192090 | 0.809387 | 1.940572e-50 | -8.615850e-47 |
Msa0710800 | Msa1193290 | 0.805689 | 1.182309e-49 | -8.615850e-47 |
Msa0710800 | Msa1196440 | 0.815082 | 1.109151e-51 | -8.615850e-47 |
Msa0710800 | Msa1199570 | 0.812855 | 3.435433e-51 | -8.615850e-47 |
Msa0710800 | Msa1199830 | -0.811550 | 6.618480e-51 | -8.615850e-47 |
Msa0710800 | Msa1200020 | 0.821703 | 3.507194e-53 | -8.615850e-47 |
Msa0710800 | Msa1205280 | 0.807937 | 3.959955e-50 | -8.615850e-47 |
Msa0710800 | Msa1208160 | 0.805453 | 1.325010e-49 | -8.615850e-47 |
Msa0710800 | Msa1208430 | 0.808520 | 2.974414e-50 | -8.615850e-47 |
Msa0710800 | Msa1209460 | 0.810204 | 1.294555e-50 | -8.615850e-47 |
Msa0710800 | Msa1218550 | 0.804395 | 2.205511e-49 | -8.615850e-47 |
Msa0710800 | Msa1221050 | 0.802490 | 5.474598e-49 | -8.615850e-47 |
Msa0710800 | Msa1225700 | 0.805804 | 1.118698e-49 | -8.615850e-47 |
Msa0710800 | Msa1229500 | 0.838598 | 2.614874e-57 | -8.615850e-47 |
Msa0710800 | Msa1232710 | 0.807574 | 4.729323e-50 | -8.615850e-47 |
Msa0710800 | Msa1236410 | 0.809362 | 1.964605e-50 | -8.615850e-47 |
Msa0710800 | Msa1238930 | 0.813550 | 2.418466e-51 | -8.615850e-47 |
Msa0710800 | Msa1239920 | 0.805997 | 1.018589e-49 | -8.615850e-47 |
Msa0710800 | Msa1243490 | 0.806163 | 9.399623e-50 | -8.615850e-47 |
Msa0710800 | Msa1271990 | 0.834618 | 2.700164e-56 | -8.615850e-47 |
Msa0710800 | Msa1276660 | 0.839098 | 1.940938e-57 | -8.615850e-47 |
Msa0710800 | Msa1279380 | 0.805603 | 1.232576e-49 | -8.615850e-47 |
Msa0710800 | Msa1284550 | 0.806738 | 7.110038e-50 | -8.615850e-47 |
Msa0710800 | Msa1297230 | 0.815451 | 9.181516e-52 | -8.615850e-47 |
Msa0710800 | Msa1298370 | 0.815036 | 1.135288e-51 | -8.615850e-47 |
Msa0710800 | Msa1303250 | 0.807517 | 4.863027e-50 | -8.615850e-47 |
Msa0710800 | Msa1309030 | 0.812081 | 5.073046e-51 | -8.615850e-47 |
Msa0710800 | Msa1313300 | 0.800140 | 1.656927e-48 | -8.615850e-47 |
Msa0710800 | Msa1315590 | 0.823247 | 1.535014e-53 | -8.615850e-47 |
Msa0710800 | Msa1328710 | 0.821824 | 3.287327e-53 | -8.615850e-47 |
Msa0710800 | Msa1330420 | 0.812313 | 4.515227e-51 | -8.615850e-47 |
Msa0710800 | Msa1343430 | 0.805713 | 1.168907e-49 | -8.615850e-47 |
Msa0710800 | Msa1345100 | 0.803452 | 3.463265e-49 | -8.615850e-47 |
Msa0710800 | Msa1346370 | 0.810432 | 1.156046e-50 | -8.615850e-47 |
Msa0710800 | Msa1353470 | 0.814976 | 1.171109e-51 | -8.615850e-47 |
Msa0710800 | Msa1353980 | 0.806012 | 1.011510e-49 | -8.615850e-47 |
Msa0710800 | Msa1356830 | 0.817802 | 2.730204e-52 | -8.615850e-47 |
Msa0710800 | Msa1360440 | 0.834066 | 3.716176e-56 | -8.615850e-47 |
Msa0710800 | Msa1360980 | 0.806343 | 8.612656e-50 | -8.615850e-47 |
Msa0710800 | Msa1366340 | 0.843339 | 1.489441e-58 | -8.615850e-47 |
Msa0710800 | Msa1367590 | 0.801152 | 1.030577e-48 | -8.615850e-47 |
Msa0710800 | Msa1369150 | 0.800290 | 1.544624e-48 | -8.615850e-47 |
Msa0710800 | Msa1373100 | 0.812725 | 3.668425e-51 | -8.615850e-47 |
Msa0710800 | Msa1374550 | 0.814216 | 1.725301e-51 | -8.615850e-47 |
Msa0710800 | Msa1375560 | 0.812713 | 3.692015e-51 | -8.615850e-47 |
Msa0710800 | Msa1382540 | 0.829818 | 4.160363e-55 | -8.615850e-47 |
Msa0710800 | Msa1382560 | 0.812539 | 4.029953e-51 | -8.615850e-47 |
Msa0710800 | Msa1385890 | 0.806511 | 7.937978e-50 | -8.615850e-47 |
Msa0710800 | Msa1386710 | 0.825504 | 4.521613e-54 | -8.615850e-47 |
Msa0710800 | Msa1387870 | 0.813535 | 2.436645e-51 | -8.615850e-47 |
Msa0710800 | Msa1400870 | -0.822403 | 2.413485e-53 | -8.615850e-47 |
Msa0710800 | Msa1409870 | 0.826715 | 2.329533e-54 | -8.615850e-47 |
Msa0710800 | Msa1409880 | 0.827859 | 1.239720e-54 | -8.615850e-47 |
Msa0710800 | Msa1413690 | 0.809675 | 1.682830e-50 | -8.615850e-47 |
Msa0710800 | Msa1419370 | 0.820723 | 5.898545e-53 | -8.615850e-47 |
Msa0710800 | Msa1422950 | 0.812495 | 4.120495e-51 | -8.615850e-47 |
Msa0710800 | Msa1423350 | 0.809820 | 1.565950e-50 | -8.615850e-47 |
Msa0710800 | Msa1423880 | 0.802815 | 4.690652e-49 | -8.615850e-47 |
Msa0710800 | Msa1429930 | 0.800022 | 1.751676e-48 | -8.615850e-47 |
Msa0710800 | Msa1436570 | 0.810019 | 1.419536e-50 | -8.615850e-47 |
Msa0710800 | Msa1437940 | 0.825421 | 4.730268e-54 | -8.615850e-47 |
Msa0710800 | Msa1440960 | 0.866885 | 2.055534e-65 | -8.615850e-47 |
Msa0710800 | Msa1445190 | 0.815186 | 1.051977e-51 | -8.615850e-47 |
Msa0710800 | Msa1446810 | 0.828646 | 8.007639e-55 | -8.615850e-47 |
Msa0710800 | Msa1451160 | 0.829474 | 5.044386e-55 | -8.615850e-47 |
Msa0710800 | Msa1464810 | 0.845772 | 3.296830e-59 | -8.615850e-47 |
Msa0124060 | Msa0710800 | 0.828015 | 1.136855e-54 | -8.615850e-47 |
Msa0124280 | Msa0710800 | 0.802775 | 4.779348e-49 | -8.615850e-47 |
Msa0131900 | Msa0710800 | 0.821051 | 4.959357e-53 | -8.615850e-47 |
Msa0136650 | Msa0710800 | 0.818904 | 1.536843e-52 | -8.615850e-47 |
Msa0145580 | Msa0710800 | 0.815333 | 9.755680e-52 | -8.615850e-47 |
Msa0152400 | Msa0710800 | 0.804014 | 2.646842e-49 | -8.615850e-47 |
Msa0157290 | Msa0710800 | 0.847662 | 1.003412e-59 | -8.615850e-47 |
Msa0160130 | Msa0710800 | 0.805567 | 1.254535e-49 | -8.615850e-47 |
Msa0164330 | Msa0710800 | 0.801832 | 7.476389e-49 | -8.615850e-47 |
Msa0166560 | Msa0710800 | 0.810637 | 1.043889e-50 | -8.615850e-47 |
Msa0168500 | Msa0710800 | 0.838251 | 3.212927e-57 | -8.615850e-47 |
Msa0171290 | Msa0710800 | 0.824958 | 6.087201e-54 | -8.615850e-47 |
Msa0171540 | Msa0710800 | 0.800789 | 1.222195e-48 | -8.615850e-47 |
Msa0173890 | Msa0710800 | 0.817787 | 2.751436e-52 | -8.615850e-47 |
Msa0211150 | Msa0710800 | 0.843495 | 1.353152e-58 | -8.615850e-47 |
Msa0212990 | Msa0710800 | 0.817878 | 2.623553e-52 | -8.615850e-47 |
Msa0218810 | Msa0710800 | 0.802000 | 6.903316e-49 | -8.615850e-47 |
Msa0221000 | Msa0710800 | 0.800415 | 1.457136e-48 | -8.615850e-47 |
Msa0223690 | Msa0710800 | 0.800151 | 1.648567e-48 | -8.615850e-47 |
Msa0225100 | Msa0710800 | 0.826579 | 2.510499e-54 | -8.615850e-47 |
Msa0225320 | Msa0710800 | 0.815158 | 1.066794e-51 | -8.615850e-47 |
Msa0225680 | Msa0710800 | 0.807690 | 4.468503e-50 | -8.615850e-47 |
Msa0365100 | Msa0710800 | 0.808243 | 3.407630e-50 | -8.615850e-47 |
Msa0366240 | Msa0710800 | 0.804040 | 2.614806e-49 | -8.615850e-47 |
Msa0367870 | Msa0710800 | 0.823467 | 1.363886e-53 | -8.615850e-47 |
Msa0376630 | Msa0710800 | 0.819740 | 9.908935e-53 | -8.615850e-47 |
Msa0378720 | Msa0710800 | 0.844727 | 6.320881e-59 | -8.615850e-47 |
Msa0380620 | Msa0710800 | 0.820673 | 6.058103e-53 | -8.615850e-47 |
Msa0392510 | Msa0710800 | 0.819264 | 1.272486e-52 | -8.615850e-47 |
Msa0395820 | Msa0710800 | 0.830764 | 2.444018e-55 | -8.615850e-47 |
Msa0405570 | Msa0710800 | 0.810623 | 1.051280e-50 | -8.615850e-47 |
Msa0410650 | Msa0710800 | 0.838760 | 2.374029e-57 | -8.615850e-47 |
Msa0417270 | Msa0710800 | 0.821788 | 3.352010e-53 | -8.615850e-47 |
Msa0417880 | Msa0710800 | 0.812269 | 4.615301e-51 | -8.615850e-47 |
Msa0422850 | Msa0710800 | 0.811294 | 7.522338e-51 | -8.615850e-47 |
Msa0422930 | Msa0710800 | 0.813132 | 2.988397e-51 | -8.615850e-47 |
Msa0425170 | Msa0710800 | 0.800145 | 1.653301e-48 | -8.615850e-47 |
Msa0428150 | Msa0710800 | 0.803777 | 2.964766e-49 | -8.615850e-47 |
Msa0430260 | Msa0710800 | 0.822711 | 2.046951e-53 | -8.615850e-47 |
Msa0436490 | Msa0710800 | -0.809574 | 1.768955e-50 | -8.615850e-47 |
Msa0437560 | Msa0710800 | 0.806844 | 6.752622e-50 | -8.615850e-47 |
Msa0440750 | Msa0710800 | 0.828774 | 7.456465e-55 | -8.615850e-47 |
Msa0450720 | Msa0710800 | 0.817041 | 4.050352e-52 | -8.615850e-47 |
Msa0460590 | Msa0710800 | 0.829824 | 4.146229e-55 | -8.615850e-47 |
Msa0461720 | Msa0710800 | 0.815228 | 1.029332e-51 | -8.615850e-47 |
Msa0462500 | Msa0710800 | 0.801782 | 7.653807e-49 | -8.615850e-47 |
Msa0464260 | Msa0710800 | 0.802303 | 5.981421e-49 | -8.615850e-47 |
Msa0464680 | Msa0710800 | 0.851399 | 9.104048e-61 | -8.615850e-47 |
Msa0469030 | Msa0710800 | 0.812920 | 3.324643e-51 | -8.615850e-47 |
Msa0471670 | Msa0710800 | 0.809599 | 1.747674e-50 | -8.615850e-47 |
Msa0474730 | Msa0710800 | 0.826222 | 3.053197e-54 | -8.615850e-47 |
Msa0479170 | Msa0710800 | 0.837704 | 4.443320e-57 | -8.615850e-47 |
Msa0481530 | Msa0710800 | 0.806651 | 7.416997e-50 | -8.615850e-47 |
Msa0239570 | Msa0710800 | 0.808895 | 2.473137e-50 | -8.615850e-47 |
Msa0244640 | Msa0710800 | 0.810423 | 1.161070e-50 | -8.615850e-47 |
Msa0244860 | Msa0710800 | 0.835581 | 1.543824e-56 | -8.615850e-47 |
Msa0248970 | Msa0710800 | 0.800299 | 1.538074e-48 | -8.615850e-47 |
Msa0249860 | Msa0710800 | 0.846631 | 1.924173e-59 | -8.615850e-47 |
Msa0255090 | Msa0710800 | 0.829757 | 4.304407e-55 | -8.615850e-47 |
Msa0258310 | Msa0710800 | 0.820254 | 7.558345e-53 | -8.615850e-47 |
Msa0259380 | Msa0710800 | 0.822719 | 2.038317e-53 | -8.615850e-47 |
Msa0259500 | Msa0710800 | 0.817394 | 3.374184e-52 | -8.615850e-47 |
Msa0261340 | Msa0710800 | 0.818603 | 1.798251e-52 | -8.615850e-47 |
Msa0264150 | Msa0710800 | 0.821643 | 3.621390e-53 | -8.615850e-47 |
Msa0266180 | Msa0710800 | 0.808337 | 3.254827e-50 | -8.615850e-47 |
Msa0266350 | Msa0710800 | 0.801003 | 1.105362e-48 | -8.615850e-47 |
Msa0266500 | Msa0710800 | 0.803766 | 2.980764e-49 | -8.615850e-47 |
Msa0267920 | Msa0710800 | 0.804502 | 2.094366e-49 | -8.615850e-47 |
Msa0277450 | Msa0710800 | 0.820428 | 6.896525e-53 | -8.615850e-47 |
Msa0283450 | Msa0710800 | 0.825078 | 5.701866e-54 | -8.615850e-47 |
Msa0283520 | Msa0710800 | 0.812834 | 3.472806e-51 | -8.615850e-47 |
Msa0287650 | Msa0710800 | 0.813319 | 2.718860e-51 | -8.615850e-47 |
Msa0287740 | Msa0710800 | 0.847581 | 1.056324e-59 | -8.615850e-47 |
Msa0292330 | Msa0710800 | 0.826754 | 2.280854e-54 | -8.615850e-47 |
Msa0292400 | Msa0710800 | 0.857260 | 1.842081e-62 | -8.615850e-47 |
Msa0294160 | Msa0710800 | 0.804389 | 2.211654e-49 | -8.615850e-47 |
Msa0295070 | Msa0710800 | 0.800044 | 1.733804e-48 | -8.615850e-47 |
Msa0297740 | Msa0710800 | 0.832975 | 6.956186e-56 | -8.615850e-47 |
Msa0297790 | Msa0710800 | 0.876397 | 1.443134e-68 | -8.615850e-47 |
Msa0300270 | Msa0710800 | 0.827421 | 1.579348e-54 | -8.615850e-47 |
Msa0300320 | Msa0710800 | 0.812704 | 3.708025e-51 | -8.615850e-47 |
Msa0300690 | Msa0710800 | 0.838501 | 2.769742e-57 | -8.615850e-47 |
Msa0302170 | Msa0710800 | 0.815267 | 1.009103e-51 | -8.615850e-47 |
Msa0305700 | Msa0710800 | 0.813069 | 3.084522e-51 | -8.615850e-47 |
Msa0317160 | Msa0710800 | 0.805400 | 1.359555e-49 | -8.615850e-47 |
Msa0317280 | Msa0710800 | 0.804526 | 2.070790e-49 | -8.615850e-47 |
Msa0330340 | Msa0710800 | 0.819286 | 1.258030e-52 | -8.615850e-47 |
Msa0332000 | Msa0710800 | 0.819987 | 8.701779e-53 | -8.615850e-47 |
Msa0335800 | Msa0710800 | 0.851998 | 6.156556e-61 | -8.615850e-47 |
Msa0337700 | Msa0710800 | 0.822561 | 2.217968e-53 | -8.615850e-47 |
Msa0338210 | Msa0710800 | 0.833022 | 6.770097e-56 | -8.615850e-47 |
Msa0339500 | Msa0710800 | 0.815740 | 7.919724e-52 | -8.615850e-47 |
Msa0341050 | Msa0710800 | 0.802193 | 6.302357e-49 | -8.615850e-47 |
Msa0341540 | Msa0710800 | 0.812266 | 4.621922e-51 | -8.615850e-47 |
Msa0341690 | Msa0710800 | 0.804544 | 2.053192e-49 | -8.615850e-47 |
Msa0345330 | Msa0710800 | 0.807411 | 5.121403e-50 | -8.615850e-47 |
Msa0345410 | Msa0710800 | 0.802219 | 6.223767e-49 | -8.615850e-47 |
Msa0345970 | Msa0710800 | 0.800896 | 1.162531e-48 | -8.615850e-47 |
Msa0357340 | Msa0710800 | 0.814223 | 1.718403e-51 | -8.615850e-47 |
Msa0357990 | Msa0710800 | 0.802105 | 6.569683e-49 | -8.615850e-47 |
Msa0358890 | Msa0710800 | 0.809612 | 1.736407e-50 | -8.615850e-47 |
Msa0363070 | Msa0710800 | 0.807654 | 4.547620e-50 | -8.615850e-47 |
Msa0363200 | Msa0710800 | 0.822786 | 1.965609e-53 | -8.615850e-47 |
Msa0487420 | Msa0710800 | 0.821996 | 2.999963e-53 | -8.615850e-47 |
Msa0488560 | Msa0710800 | 0.806510 | 7.941457e-50 | -8.615850e-47 |
Msa0495320 | Msa0710800 | 0.807507 | 4.886931e-50 | -8.615850e-47 |
Msa0495330 | Msa0710800 | 0.806391 | 8.414111e-50 | -8.615850e-47 |
Msa0498060 | Msa0710800 | 0.806939 | 6.447660e-50 | -8.615850e-47 |
Msa0507680 | Msa0710800 | 0.839684 | 1.367994e-57 | -8.615850e-47 |
Msa0513160 | Msa0710800 | 0.815649 | 8.295856e-52 | -8.615850e-47 |
Msa0527550 | Msa0710800 | 0.801379 | 9.260059e-49 | -8.615850e-47 |
Msa0532990 | Msa0710800 | 0.812861 | 3.426704e-51 | -8.615850e-47 |
Msa0546500 | Msa0710800 | 0.810381 | 1.185521e-50 | -8.615850e-47 |
Msa0546680 | Msa0710800 | 0.805835 | 1.101596e-49 | -8.615850e-47 |
Msa0547170 | Msa0710800 | 0.806393 | 8.406326e-50 | -8.615850e-47 |
Msa0569200 | Msa0710800 | 0.813315 | 2.723643e-51 | -8.615850e-47 |
Msa0572840 | Msa0710800 | 0.833015 | 6.798112e-56 | -8.615850e-47 |
Msa0574890 | Msa0710800 | 0.832416 | 9.574532e-56 | -8.615850e-47 |
Msa0585560 | Msa0710800 | 0.809019 | 2.326516e-50 | -8.615850e-47 |
Msa0597790 | Msa0710800 | 0.816536 | 5.256792e-52 | -8.615850e-47 |
Msa0601750 | Msa0710800 | 0.813565 | 2.400248e-51 | -8.615850e-47 |
Msa0602240 | Msa0710800 | 0.811395 | 7.153434e-51 | -8.615850e-47 |
Msa0602250 | Msa0710800 | 0.815997 | 6.938274e-52 | -8.615850e-47 |
Msa0602460 | Msa0710800 | 0.807580 | 4.715637e-50 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0710800 | MtrunA17_Chr5g0422371 | 97.826 | 184 | 4 | 0 | 1 | 184 | 61 | 244 | 1.45e-130 | 365 |
Msa0710800 | MtrunA17_Chr6g0456901 | 49.112 | 169 | 85 | 1 | 1 | 168 | 55 | 223 | 6.55e-53 | 168 |
Msa0710800 | MtrunA17_Chr1g0203371 | 43.636 | 165 | 91 | 2 | 1 | 164 | 54 | 217 | 1.13e-39 | 134 |
Msa0710800 | MtrunA17_Chr1g0161921 | 42.515 | 167 | 90 | 2 | 1 | 166 | 56 | 217 | 5.42e-39 | 132 |
Msa0710800 | MtrunA17_Chr1g0161941 | 35.185 | 162 | 100 | 2 | 1 | 161 | 50 | 207 | 5.53e-29 | 106 |
Msa0710800 | MtrunA17_Chr8g0375991 | 37.736 | 159 | 92 | 4 | 1 | 158 | 50 | 202 | 2.67e-25 | 97.4 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0710800 | AT1G26100.1 | 70.370 | 189 | 51 | 2 | 1 | 184 | 48 | 236 | 4.70e-85 | 251 |
Msa0710800 | AT5G38630.1 | 49.714 | 175 | 82 | 3 | 1 | 170 | 55 | 228 | 2.07e-54 | 172 |
Msa0710800 | AT4G25570.1 | 43.558 | 163 | 90 | 2 | 1 | 162 | 54 | 215 | 5.08e-39 | 133 |
Msa0710800 | AT4G25570.2 | 43.558 | 163 | 90 | 2 | 1 | 162 | 95 | 256 | 1.81e-38 | 133 |
Msa0710800 | AT1G14730.1 | 32.184 | 174 | 105 | 3 | 1 | 173 | 61 | 222 | 1.27e-20 | 85.5 |
Find 70 sgRNAs with CRISPR-Local
Find 169 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GCTTTAGCTTCTGGGATATT+TGG | 0.112597 | 5_1:+2561281 | Msa0710800:CDS |
TAGCATTTCTTGTTCTCTTC+TGG | 0.118815 | 5_1:+2560841 | Msa0710800:five_prime_UTR |
CCTTAGTGGCTTTGTTATTC+TGG | 0.121532 | 5_1:+2563789 | Msa0710800:CDS |
CAAGGGGTGGCTTTAGCTTC+TGG | 0.175443 | 5_1:+2561272 | Msa0710800:CDS |
GAATGTTTGTGCAGCAATTT+TGG | 0.224729 | 5_1:+2561193 | Msa0710800:intron |
TTGATTTGTGTATCACTCTT+TGG | 0.246496 | 5_1:+2561374 | Msa0710800:CDS |
TAATAGGCTTCTTGAACTTT+TGG | 0.266466 | 5_1:+2563566 | Msa0710800:CDS |
CTTTAGCTTCTGGGATATTT+GGG | 0.267158 | 5_1:+2561282 | Msa0710800:CDS |
TTACCATGGCATGTATTTCT+TGG | 0.277630 | 5_1:+2563625 | Msa0710800:CDS |
CTTCTGGGATATTTGGGATT+TGG | 0.279862 | 5_1:+2561288 | Msa0710800:CDS |
TCCTGTTGAGGAAGAGAATT+AGG | 0.298620 | 5_1:-2560897 | None:intergenic |
ATTTCTACAGCCTTCATTCA+TGG | 0.299138 | 5_1:+2561345 | Msa0710800:CDS |
AAGGGGTGGCTTTAGCTTCT+GGG | 0.303519 | 5_1:+2561273 | Msa0710800:CDS |
AGCATTTCTTGTTCTCTTCT+GGG | 0.319777 | 5_1:+2560842 | Msa0710800:five_prime_UTR |
TACTACCTTCTCCACTTAAA+AGG | 0.321243 | 5_1:-2561060 | None:intergenic |
CCACAATCCCATCATTTACT+TGG | 0.326307 | 5_1:-2561319 | None:intergenic |
TCCATGGTTGTAAATTCTTT+AGG | 0.339651 | 5_1:+2563751 | Msa0710800:CDS |
CATCCTGTGCTCATGGTCAT+TGG | 0.339718 | 5_1:+2561031 | Msa0710800:exon |
ACATTTAGTTACAGTTGTTA+TGG | 0.357021 | 5_1:+2560759 | Msa0710800:five_prime_UTR |
GCAGTAGCAACGGCTGAAAC+TGG | 0.360280 | 5_1:+2563667 | Msa0710800:CDS |
TTAGGTCTTGCTCTCCTTAG+TGG | 0.363802 | 5_1:+2563775 | Msa0710800:CDS |
TTGTTAGAATTTAGATATCT+TGG | 0.364277 | 5_1:+2563933 | Msa0710800:three_prime_UTR |
GTTGTAAATTCTTTAGGCTT+AGG | 0.366014 | 5_1:+2563757 | Msa0710800:CDS |
ATTGTATTGCAGTGGCTAAT+AGG | 0.375849 | 5_1:+2563550 | Msa0710800:intron |
CCTAAGTATCAAATTCTTCA+AGG | 0.384117 | 5_1:+2563823 | Msa0710800:CDS |
CCTTGAAGAATTTGATACTT+AGG | 0.393626 | 5_1:-2563823 | None:intergenic |
TCCTAATTCTCTTCCTCAAC+AGG | 0.404001 | 5_1:+2560896 | Msa0710800:five_prime_UTR |
TGTATCACTCTTTGGAGCTC+AGG | 0.406685 | 5_1:+2561382 | Msa0710800:CDS |
TAGATGGTTGCCTGGGTCAA+GGG | 0.416984 | 5_1:+2561220 | Msa0710800:CDS |
CTGCCAATGCATAAGTGTAT+AGG | 0.426996 | 5_1:-2563648 | None:intergenic |
AAATGCGAACAGTGAGGATA+AGG | 0.435065 | 5_1:+2563599 | Msa0710800:CDS |
ACAAAATTCCAAGTAAATGA+TGG | 0.437217 | 5_1:+2561311 | Msa0710800:CDS |
TACAGCCTTCATTCATGGAT+GGG | 0.445813 | 5_1:+2561350 | Msa0710800:CDS |
CATGGACTCAGTGCTGTGTT+TGG | 0.448440 | 5_1:-2563734 | None:intergenic |
ATAGATGGTTGCCTGGGTCA+AGG | 0.449560 | 5_1:+2561219 | Msa0710800:CDS |
ACTACTAACTACTACACTCT+TGG | 0.453368 | 5_1:-2560694 | None:intergenic |
GAAGAGAATTAGGAGTATTG+AGG | 0.459271 | 5_1:-2560887 | None:intergenic |
TCGGTGCATTTATGTCTTCA+AGG | 0.466772 | 5_1:+2561254 | Msa0710800:CDS |
TTGGTGCATAGATGGTTGCC+TGG | 0.471390 | 5_1:+2561212 | Msa0710800:CDS |
GGTTCTCCATCCTGTGCTCA+TGG | 0.477323 | 5_1:+2561024 | Msa0710800:intron |
CTACAGCCTTCATTCATGGA+TGG | 0.480089 | 5_1:+2561349 | Msa0710800:CDS |
AGATGGTTGCCTGGGTCAAG+GGG | 0.483244 | 5_1:+2561221 | Msa0710800:CDS |
CCAGAATAACAAAGCCACTA+AGG | 0.497367 | 5_1:-2563789 | None:intergenic |
CGGTGCATTTATGTCTTCAA+GGG | 0.507370 | 5_1:+2561255 | Msa0710800:CDS |
TCACTGTTCGCATTTCTCCT+CGG | 0.512543 | 5_1:-2563591 | None:intergenic |
CAAACACAGCACTGAGTCCA+TGG | 0.530906 | 5_1:+2563735 | Msa0710800:CDS |
CAAAATTCCAAGTAAATGAT+GGG | 0.535853 | 5_1:+2561312 | Msa0710800:CDS |
CCAAGTAAATGATGGGATTG+TGG | 0.538655 | 5_1:+2561319 | Msa0710800:CDS |
TCAAACCCATCCATGAATGA+AGG | 0.539092 | 5_1:-2561355 | None:intergenic |
AACTCTCGCAAGAAAAGCAA+AGG | 0.541441 | 5_1:-2560805 | None:intergenic |
GCATTTATGTCTTCAAGGGG+TGG | 0.549961 | 5_1:+2561259 | Msa0710800:CDS |
TGGTCACAAGCGAATTAAGA+TGG | 0.551793 | 5_1:+2563953 | Msa0710800:three_prime_UTR |
TGGCCTATACACTTATGCAT+TGG | 0.552843 | 5_1:+2563645 | Msa0710800:CDS |
AAAAGCAAAGGGAGTAGTGA+GGG | 0.558333 | 5_1:-2560793 | None:intergenic |
AGGCCAAGAAATACATGCCA+TGG | 0.575316 | 5_1:-2563628 | None:intergenic |
TTATGCATTGGCAGTAGCAA+CGG | 0.579204 | 5_1:+2563657 | Msa0710800:CDS |
TGGTGCATAGATGGTTGCCT+GGG | 0.586545 | 5_1:+2561213 | Msa0710800:CDS |
GCCTAAAGAATTTACAACCA+TGG | 0.590393 | 5_1:-2563752 | None:intergenic |
CTAACTACTACACTCTTGGA+TGG | 0.593357 | 5_1:-2560690 | None:intergenic |
AATCCAATGACCATGAGCAC+AGG | 0.602677 | 5_1:-2561034 | None:intergenic |
CAATGACCATGAGCACAGGA+TGG | 0.614301 | 5_1:-2561030 | None:intergenic |
ACTCTCGCAAGAAAAGCAAA+GGG | 0.615668 | 5_1:-2560804 | None:intergenic |
GATGGTTGCCTGGGTCAAGG+GGG | 0.624454 | 5_1:+2561222 | Msa0710800:CDS |
GAAAAGCAAAGGGAGTAGTG+AGG | 0.632926 | 5_1:-2560794 | None:intergenic |
GTGAGTGAGTGACTAGTGAG+AGG | 0.642048 | 5_1:+2560715 | Msa0710800:five_prime_UTR |
GGTGCATTTATGTCTTCAAG+GGG | 0.646132 | 5_1:+2561256 | Msa0710800:CDS |
GCATAGATGAGATCCTGTTG+AGG | 0.669004 | 5_1:-2560909 | None:intergenic |
GAGTAGTGAGGGAAAGACAG+TGG | 0.669481 | 5_1:-2560782 | None:intergenic |
TGAGGATAAGGATCTTACCA+TGG | 0.703662 | 5_1:+2563611 | Msa0710800:CDS |
GAGGAGAAATGCGAACAGTG+AGG | 0.732322 | 5_1:+2563593 | Msa0710800:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TAAAATTTAAATAAATATTA+AGG | + | chr5_1:2561593-2561612 | Msa0710800:intron | 0.0% |
!! | TTGATGTAATTAAATAAAAA+GGG | - | chr5_1:2560965-2560984 | None:intergenic | 10.0% |
!! | TTTGATGTAATTAAATAAAA+AGG | - | chr5_1:2560966-2560985 | None:intergenic | 10.0% |
!!! | TTTAATTTTAATTTAATTGC+AGG | + | chr5_1:2561003-2561022 | Msa0710800:intron | 10.0% |
!!! | AAAAAATTCTGAAATTTTTT+TGG | + | chr5_1:2562176-2562195 | Msa0710800:intron | 10.0% |
!!! | AAATTTTAAATGAAATTGAA+AGG | - | chr5_1:2562678-2562697 | None:intergenic | 10.0% |
!! | TTAACTATTAATTTAAGAAT+TGG | + | chr5_1:2563292-2563311 | Msa0710800:intron | 10.0% |
!!! | TTCTAAGATTAATTTTTACT+TGG | + | chr5_1:2561450-2561469 | Msa0710800:intron | 15.0% |
!!! | TCTAAGATTAATTTTTACTT+GGG | + | chr5_1:2561451-2561470 | Msa0710800:intron | 15.0% |
!!! | TAGTGATTGAAAATTTTATA+GGG | - | chr5_1:2561978-2561997 | None:intergenic | 15.0% |
!!! | TGAAGATTGAAAATTTTATA+AGG | + | chr5_1:2562292-2562311 | Msa0710800:intron | 15.0% |
!! | AAAAAGTTGACATATTTATA+GGG | + | chr5_1:2562352-2562371 | Msa0710800:intron | 15.0% |
!! | AACCCAAAAATATTATGTAT+TGG | + | chr5_1:2561096-2561115 | Msa0710800:intron | 20.0% |
!! | ACCCAAAAATATTATGTATT+GGG | + | chr5_1:2561097-2561116 | Msa0710800:intron | 20.0% |
!!! | TCCCAATACATAATATTTTT+GGG | - | chr5_1:2561101-2561120 | None:intergenic | 20.0% |
!!! | ATCCCAATACATAATATTTT+TGG | - | chr5_1:2561102-2561121 | None:intergenic | 20.0% |
!! | AAATATTATGTATTGGGATT+AGG | + | chr5_1:2561103-2561122 | Msa0710800:intron | 20.0% |
!! | TAATGAAATCAAGTCATTAT+TGG | + | chr5_1:2561136-2561155 | Msa0710800:intron | 20.0% |
!!! | AATTTTATTTCCTGATGAAT+AGG | - | chr5_1:2561580-2561599 | None:intergenic | 20.0% |
!!! | TTAGCTTATGAAATGATTTT+TGG | + | chr5_1:2561652-2561671 | Msa0710800:intron | 20.0% |
!!! | ATTTTGTATTTTCCTTCTTT+GGG | - | chr5_1:2561813-2561832 | None:intergenic | 20.0% |
!!! | TAAAAAGAACATGAAAGTAT+AGG | - | chr5_1:2561875-2561894 | None:intergenic | 20.0% |
!!! | TATACTTTCATGTTCTTTTT+AGG | + | chr5_1:2561874-2561893 | Msa0710800:intron | 20.0% |
!!! | ATACTTTCATGTTCTTTTTA+GGG | + | chr5_1:2561875-2561894 | Msa0710800:intron | 20.0% |
!! | GAAAAGTTGACATATTTATA+GGG | - | chr5_1:2561918-2561937 | None:intergenic | 20.0% |
!!! | GTAGTGATTGAAAATTTTAT+AGG | - | chr5_1:2561979-2561998 | None:intergenic | 20.0% |
!!! | ATATGAGTTTACTTTAAAAG+AGG | + | chr5_1:2562260-2562279 | Msa0710800:intron | 20.0% |
!!! | TATGAGTTTACTTTAAAAGA+GGG | + | chr5_1:2562261-2562280 | Msa0710800:intron | 20.0% |
!!! | AAATTTTCAATCTTCACTTT+TGG | - | chr5_1:2562288-2562307 | None:intergenic | 20.0% |
!! | CAAAAAGTTGACATATTTAT+AGG | + | chr5_1:2562351-2562370 | Msa0710800:intron | 20.0% |
!!! | AGAATGGTTAAATATGTTTT+TGG | - | chr5_1:2562379-2562398 | None:intergenic | 20.0% |
!! | AATCGTGAAATTAAAAAGAA+TGG | - | chr5_1:2562395-2562414 | None:intergenic | 20.0% |
!! | AATTCTATTATTATCCCATA+TGG | + | chr5_1:2562502-2562521 | Msa0710800:intron | 20.0% |
!! | AATATTTATTCGATCCATAT+GGG | - | chr5_1:2562519-2562538 | None:intergenic | 20.0% |
!!! | TTGTCAAAAGTTTTTCAATT+AGG | + | chr5_1:2562557-2562576 | Msa0710800:intron | 20.0% |
!! | CAAAAAATTTGAACAAAAGA+GGG | + | chr5_1:2562786-2562805 | Msa0710800:intron | 20.0% |
!! | AAAAAATTTGAACAAAAGAG+GGG | + | chr5_1:2562787-2562806 | Msa0710800:intron | 20.0% |
!! | CTTATGCAAATTTATTAGTT+AGG | - | chr5_1:2562889-2562908 | None:intergenic | 20.0% |
!! | CTCAAATAATGATAACTAAT+TGG | - | chr5_1:2562915-2562934 | None:intergenic | 20.0% |
!!! | ATTCACAAATTAAGCTATTT+TGG | + | chr5_1:2562955-2562974 | Msa0710800:intron | 20.0% |
!!! | TTAGTGTATACATAATCTTT+TGG | + | chr5_1:2563448-2563467 | Msa0710800:intron | 20.0% |
!!! | TAGTGTATACATAATCTTTT+GGG | + | chr5_1:2563449-2563468 | Msa0710800:intron | 20.0% |
!!! | GTGTATAGATATTTTATGTA+TGG | + | chr5_1:2563482-2563501 | Msa0710800:intron | 20.0% |
!! | TTGTTAGAATTTAGATATCT+TGG | + | chr5_1:2563933-2563952 | Msa0710800:three_prime_UTR | 20.0% |
! | ACATTTAGTTACAGTTGTTA+TGG | + | chr5_1:2560759-2560778 | Msa0710800:five_prime_UTR | 25.0% |
!! | ATTGGATTTATCCTTTTAAG+TGG | + | chr5_1:2561049-2561068 | Msa0710800:CDS | 25.0% |
! | ACAAAATTCCAAGTAAATGA+TGG | + | chr5_1:2561311-2561330 | Msa0710800:CDS | 25.0% |
! | CAAAATTCCAAGTAAATGAT+GGG | + | chr5_1:2561312-2561331 | Msa0710800:CDS | 25.0% |
! | AATATGCACTAAATATGTGA+TGG | + | chr5_1:2561706-2561725 | Msa0710800:intron | 25.0% |
! | ATTGTACTAACTAGCTAAAT+TGG | - | chr5_1:2561768-2561787 | None:intergenic | 25.0% |
!! | CATTTTGTATTTTCCTTCTT+TGG | - | chr5_1:2561814-2561833 | None:intergenic | 25.0% |
!! | TCGTCTTGTTGTAAAAATTT+AGG | + | chr5_1:2561848-2561867 | Msa0710800:intron | 25.0% |
! | CGAAAAGTTGACATATTTAT+AGG | - | chr5_1:2561919-2561938 | None:intergenic | 25.0% |
! | TTATAAGGACTAAAAGTTGA+AGG | + | chr5_1:2562307-2562326 | Msa0710800:intron | 25.0% |
!! | AAGTTGAAGGAAAATTTTAG+AGG | + | chr5_1:2562320-2562339 | Msa0710800:intron | 25.0% |
! | CAATATTTATTCGATCCATA+TGG | - | chr5_1:2562520-2562539 | None:intergenic | 25.0% |
! | ATCATAAGAGAAAATATACG+AGG | - | chr5_1:2562646-2562665 | None:intergenic | 25.0% |
!! | CCTCTTTTGTTCAAATTTTT+TGG | - | chr5_1:2562788-2562807 | None:intergenic | 25.0% |
! | CCAAAAAATTTGAACAAAAG+AGG | + | chr5_1:2562785-2562804 | Msa0710800:intron | 25.0% |
!!! | TCAAAAAGTATTTTCCATGT+AGG | + | chr5_1:2562824-2562843 | Msa0710800:intron | 25.0% |
!!! | ATTACATTTTTTCTCCTACA+TGG | - | chr5_1:2562841-2562860 | None:intergenic | 25.0% |
! | ATGCAAATTTATTAGTTAGG+AGG | - | chr5_1:2562886-2562905 | None:intergenic | 25.0% |
!!! | CAAATTAAGCTATTTTGGTA+CGG | + | chr5_1:2562960-2562979 | Msa0710800:intron | 25.0% |
! | AACTCTCTATTTCATACAAA+TGG | - | chr5_1:2563012-2563031 | None:intergenic | 25.0% |
! | GATAATGCATAATATATGCA+AGG | + | chr5_1:2563339-2563358 | Msa0710800:intron | 25.0% |
!! | AGTGTATACATAATCTTTTG+GGG | + | chr5_1:2563450-2563469 | Msa0710800:intron | 25.0% |
AAAGGGAATGAAGAAAATAG+AGG | - | chr5_1:2560948-2560967 | None:intergenic | 30.0% | |
!! | TTTATCCTTTTAAGTGGAGA+AGG | + | chr5_1:2561055-2561074 | Msa0710800:CDS | 30.0% |
!! | TTGATTTGTGTATCACTCTT+TGG | + | chr5_1:2561374-2561393 | Msa0710800:CDS | 30.0% |
! | AGACTCTTTTGTATCAGTTT+TGG | + | chr5_1:2561625-2561644 | Msa0710800:intron | 30.0% |
AACTAGCTAAATTGGAAAGT+AGG | - | chr5_1:2561760-2561779 | None:intergenic | 30.0% | |
!! | AGTCGAAGGAATATTTTAGA+GGG | - | chr5_1:2561949-2561968 | None:intergenic | 30.0% |
!! | AAGTCGAAGGAATATTTTAG+AGG | - | chr5_1:2561950-2561969 | None:intergenic | 30.0% |
AGATTCTATGAGAGTTAACT+TGG | - | chr5_1:2562741-2562760 | None:intergenic | 30.0% | |
!!! | AATTTTTTGGCAGTTTTTCG+TGG | - | chr5_1:2562775-2562794 | None:intergenic | 30.0% |
ATGCATAATATATGCAAGGT+TGG | + | chr5_1:2563343-2563362 | Msa0710800:intron | 30.0% | |
TTCAACATATTGTATTGCAG+TGG | + | chr5_1:2563542-2563561 | Msa0710800:intron | 30.0% | |
! | TAATAGGCTTCTTGAACTTT+TGG | + | chr5_1:2563566-2563585 | Msa0710800:CDS | 30.0% |
TCCATGGTTGTAAATTCTTT+AGG | + | chr5_1:2563751-2563770 | Msa0710800:CDS | 30.0% | |
GTTGTAAATTCTTTAGGCTT+AGG | + | chr5_1:2563757-2563776 | Msa0710800:CDS | 30.0% | |
CCTTGAAGAATTTGATACTT+AGG | - | chr5_1:2563826-2563845 | None:intergenic | 30.0% | |
CCTAAGTATCAAATTCTTCA+AGG | + | chr5_1:2563823-2563842 | Msa0710800:CDS | 30.0% | |
! | AACTTTTGTACTCAGATTCT+AGG | + | chr5_1:2563848-2563867 | Msa0710800:CDS | 30.0% |
ACTACTAACTACTACACTCT+TGG | - | chr5_1:2560697-2560716 | None:intergenic | 35.0% | |
TAGCATTTCTTGTTCTCTTC+TGG | + | chr5_1:2560841-2560860 | Msa0710800:five_prime_UTR | 35.0% | |
AGCATTTCTTGTTCTCTTCT+GGG | + | chr5_1:2560842-2560861 | Msa0710800:five_prime_UTR | 35.0% | |
!! | GAAGAGAATTAGGAGTATTG+AGG | - | chr5_1:2560890-2560909 | None:intergenic | 35.0% |
TACTACCTTCTCCACTTAAA+AGG | - | chr5_1:2561063-2561082 | None:intergenic | 35.0% | |
! | GAATGTTTGTGCAGCAATTT+TGG | + | chr5_1:2561193-2561212 | Msa0710800:intron | 35.0% |
!! | CTTTAGCTTCTGGGATATTT+GGG | + | chr5_1:2561282-2561301 | Msa0710800:CDS | 35.0% |
ATTTCTACAGCCTTCATTCA+TGG | + | chr5_1:2561345-2561364 | Msa0710800:CDS | 35.0% | |
TATCTTGACACCTATTCATC+AGG | + | chr5_1:2561567-2561586 | Msa0710800:intron | 35.0% | |
TTGGGTCAGAATTCTCTAAT+TGG | - | chr5_1:2561795-2561814 | None:intergenic | 35.0% | |
TTATAGGGACTAAAAGTCGA+AGG | - | chr5_1:2561963-2561982 | None:intergenic | 35.0% | |
AACAAAAGAGGGGCAAAAAT+AGG | + | chr5_1:2562797-2562816 | Msa0710800:intron | 35.0% | |
TTTGAGTATGCGAGATTATG+CGG | + | chr5_1:2562929-2562948 | Msa0710800:intron | 35.0% | |
!!! | TTAAGCTATTTTGGTACGGT+TGG | + | chr5_1:2562964-2562983 | Msa0710800:intron | 35.0% |
TGGTTAGAGTTTAACTCAGT+TGG | + | chr5_1:2563312-2563331 | Msa0710800:intron | 35.0% | |
TTAGAGTTTAACTCAGTTGG+TGG | + | chr5_1:2563315-2563334 | Msa0710800:intron | 35.0% | |
TAGAGTTTAACTCAGTTGGT+GGG | + | chr5_1:2563316-2563335 | Msa0710800:intron | 35.0% | |
AATCCAGACACTACAAAGAT+TGG | + | chr5_1:2563372-2563391 | Msa0710800:intron | 35.0% | |
TAACCAATCTTTGTAGTGTC+TGG | - | chr5_1:2563378-2563397 | None:intergenic | 35.0% | |
ATTGTATTGCAGTGGCTAAT+AGG | + | chr5_1:2563550-2563569 | Msa0710800:intron | 35.0% | |
TTACCATGGCATGTATTTCT+TGG | + | chr5_1:2563625-2563644 | Msa0710800:CDS | 35.0% | |
GCCTAAAGAATTTACAACCA+TGG | - | chr5_1:2563755-2563774 | None:intergenic | 35.0% | |
CTAACTACTACACTCTTGGA+TGG | - | chr5_1:2560693-2560712 | None:intergenic | 40.0% | |
AAAAGCAAAGGGAGTAGTGA+GGG | - | chr5_1:2560796-2560815 | None:intergenic | 40.0% | |
ACTCTCGCAAGAAAAGCAAA+GGG | - | chr5_1:2560807-2560826 | None:intergenic | 40.0% | |
AACTCTCGCAAGAAAAGCAA+AGG | - | chr5_1:2560808-2560827 | None:intergenic | 40.0% | |
TCCTAATTCTCTTCCTCAAC+AGG | + | chr5_1:2560896-2560915 | Msa0710800:five_prime_UTR | 40.0% | |
TCCTGTTGAGGAAGAGAATT+AGG | - | chr5_1:2560900-2560919 | None:intergenic | 40.0% | |
!! | CAGCAATTTTGGTGCATAGA+TGG | + | chr5_1:2561204-2561223 | Msa0710800:intron | 40.0% |
TCGGTGCATTTATGTCTTCA+AGG | + | chr5_1:2561254-2561273 | Msa0710800:CDS | 40.0% | |
CGGTGCATTTATGTCTTCAA+GGG | + | chr5_1:2561255-2561274 | Msa0710800:CDS | 40.0% | |
GGTGCATTTATGTCTTCAAG+GGG | + | chr5_1:2561256-2561275 | Msa0710800:CDS | 40.0% | |
!! | GCTTTAGCTTCTGGGATATT+TGG | + | chr5_1:2561281-2561300 | Msa0710800:CDS | 40.0% |
!! | CTTCTGGGATATTTGGGATT+TGG | + | chr5_1:2561288-2561307 | Msa0710800:CDS | 40.0% |
CCACAATCCCATCATTTACT+TGG | - | chr5_1:2561322-2561341 | None:intergenic | 40.0% | |
! | CCAAGTAAATGATGGGATTG+TGG | + | chr5_1:2561319-2561338 | Msa0710800:CDS | 40.0% |
TACAGCCTTCATTCATGGAT+GGG | + | chr5_1:2561350-2561369 | Msa0710800:CDS | 40.0% | |
TCAAACCCATCCATGAATGA+AGG | - | chr5_1:2561358-2561377 | None:intergenic | 40.0% | |
!! | TGAATGATTGATGACGACCT+CGG | + | chr5_1:2561733-2561752 | Msa0710800:intron | 40.0% |
TAAATTGGAAAGTAGGTCCG+AGG | - | chr5_1:2561753-2561772 | None:intergenic | 40.0% | |
AGAGAATTCTGACCCAAAGA+AGG | + | chr5_1:2561798-2561817 | Msa0710800:intron | 40.0% | |
ACAAGACGAATGCTTCTGTT+GGG | - | chr5_1:2561837-2561856 | None:intergenic | 40.0% | |
AACAAGACGAATGCTTCTGT+TGG | - | chr5_1:2561838-2561857 | None:intergenic | 40.0% | |
! | AGAGTTTAACTCAGTTGGTG+GGG | + | chr5_1:2563317-2563336 | Msa0710800:intron | 40.0% |
AAATGCGAACAGTGAGGATA+AGG | + | chr5_1:2563599-2563618 | Msa0710800:CDS | 40.0% | |
TGAGGATAAGGATCTTACCA+TGG | + | chr5_1:2563611-2563630 | Msa0710800:CDS | 40.0% | |
TGGCCTATACACTTATGCAT+TGG | + | chr5_1:2563645-2563664 | Msa0710800:CDS | 40.0% | |
CTGCCAATGCATAAGTGTAT+AGG | - | chr5_1:2563651-2563670 | None:intergenic | 40.0% | |
! | TTATGCATTGGCAGTAGCAA+CGG | + | chr5_1:2563657-2563676 | Msa0710800:CDS | 40.0% |
CCAGAATAACAAAGCCACTA+AGG | - | chr5_1:2563792-2563811 | None:intergenic | 40.0% | |
!! | CCTTAGTGGCTTTGTTATTC+TGG | + | chr5_1:2563789-2563808 | Msa0710800:CDS | 40.0% |
TGGTCACAAGCGAATTAAGA+TGG | + | chr5_1:2563953-2563972 | Msa0710800:three_prime_UTR | 40.0% | |
GAAAAGCAAAGGGAGTAGTG+AGG | - | chr5_1:2560797-2560816 | None:intergenic | 45.0% | |
! | GCTTTTCTTGCGAGAGTTTG+TGG | + | chr5_1:2560810-2560829 | Msa0710800:five_prime_UTR | 45.0% |
GCATAGATGAGATCCTGTTG+AGG | - | chr5_1:2560912-2560931 | None:intergenic | 45.0% | |
AATCCAATGACCATGAGCAC+AGG | - | chr5_1:2561037-2561056 | None:intergenic | 45.0% | |
GTCAAGGGGGTTGAAGAAAT+CGG | + | chr5_1:2561235-2561254 | Msa0710800:CDS | 45.0% | |
GCATTTATGTCTTCAAGGGG+TGG | + | chr5_1:2561259-2561278 | Msa0710800:CDS | 45.0% | |
CTACAGCCTTCATTCATGGA+TGG | + | chr5_1:2561349-2561368 | Msa0710800:CDS | 45.0% | |
!! | TGTATCACTCTTTGGAGCTC+AGG | + | chr5_1:2561382-2561401 | Msa0710800:CDS | 45.0% |
! | TTCTTGAACTTTTGGCACCG+AGG | + | chr5_1:2563574-2563593 | Msa0710800:CDS | 45.0% |
TCACTGTTCGCATTTCTCCT+CGG | - | chr5_1:2563594-2563613 | None:intergenic | 45.0% | |
AGGCCAAGAAATACATGCCA+TGG | - | chr5_1:2563631-2563650 | None:intergenic | 45.0% | |
TTAGGTCTTGCTCTCCTTAG+TGG | + | chr5_1:2563775-2563794 | Msa0710800:CDS | 45.0% | |
!! | CAAAAATTAAATTAAAAATA+GGG | - | chr5_1:2562009-2562028 | None:intergenic | 5.0% |
!! | ACAAAAATTAAATTAAAAAT+AGG | - | chr5_1:2562010-2562029 | None:intergenic | 5.0% |
!!! | TAAAAATTCTAATTTTTTTT+AGG | - | chr5_1:2562082-2562101 | None:intergenic | 5.0% |
!!! | TATAATATTTTGAATTTTTT+TGG | + | chr5_1:2562208-2562227 | Msa0710800:intron | 5.0% |
GTGAGTGAGTGACTAGTGAG+AGG | + | chr5_1:2560715-2560734 | Msa0710800:five_prime_UTR | 50.0% | |
GAGTAGTGAGGGAAAGACAG+TGG | - | chr5_1:2560785-2560804 | None:intergenic | 50.0% | |
CAATGACCATGAGCACAGGA+TGG | - | chr5_1:2561033-2561052 | None:intergenic | 50.0% | |
CATCCTGTGCTCATGGTCAT+TGG | + | chr5_1:2561031-2561050 | Msa0710800:exon | 50.0% | |
TTGGTGCATAGATGGTTGCC+TGG | + | chr5_1:2561212-2561231 | Msa0710800:CDS | 50.0% | |
TGGTGCATAGATGGTTGCCT+GGG | + | chr5_1:2561213-2561232 | Msa0710800:CDS | 50.0% | |
ATAGATGGTTGCCTGGGTCA+AGG | + | chr5_1:2561219-2561238 | Msa0710800:CDS | 50.0% | |
TAGATGGTTGCCTGGGTCAA+GGG | + | chr5_1:2561220-2561239 | Msa0710800:CDS | 50.0% | |
!! | AAGGGGTGGCTTTAGCTTCT+GGG | + | chr5_1:2561273-2561292 | Msa0710800:CDS | 50.0% |
GAGGAGAAATGCGAACAGTG+AGG | + | chr5_1:2563593-2563612 | Msa0710800:CDS | 50.0% | |
CATGGACTCAGTGCTGTGTT+TGG | - | chr5_1:2563737-2563756 | None:intergenic | 50.0% | |
! | CAAACACAGCACTGAGTCCA+TGG | + | chr5_1:2563735-2563754 | Msa0710800:CDS | 50.0% |
GGTTCTCCATCCTGTGCTCA+TGG | + | chr5_1:2561024-2561043 | Msa0710800:intron | 55.0% | |
AGATGGTTGCCTGGGTCAAG+GGG | + | chr5_1:2561221-2561240 | Msa0710800:CDS | 55.0% | |
TTCTTCAACCCCCTTGACCC+AGG | - | chr5_1:2561233-2561252 | None:intergenic | 55.0% | |
!! | CAAGGGGTGGCTTTAGCTTC+TGG | + | chr5_1:2561272-2561291 | Msa0710800:CDS | 55.0% |
GCAGTAGCAACGGCTGAAAC+TGG | + | chr5_1:2563667-2563686 | Msa0710800:CDS | 55.0% | |
GATGGTTGCCTGGGTCAAGG+GGG | + | chr5_1:2561222-2561241 | Msa0710800:CDS | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr5_1 | gene | 2560682 | 2563989 | 2560682 | ID=Msa0710800;Name=Msa0710800 |
chr5_1 | mRNA | 2560682 | 2563989 | 2560682 | ID=Msa0710800-mRNA-1;Parent=Msa0710800;Name=Msa0710800-mRNA-1;_AED=0.11;_eAED=0.11;_QI=269|1|1|1|1|1|4|104|184 |
chr5_1 | exon | 2560682 | 2560932 | 2560682 | ID=Msa0710800-mRNA-1:exon:799;Parent=Msa0710800-mRNA-1 |
chr5_1 | exon | 2561025 | 2561076 | 2561025 | ID=Msa0710800-mRNA-1:exon:800;Parent=Msa0710800-mRNA-1 |
chr5_1 | exon | 2561207 | 2561403 | 2561207 | ID=Msa0710800-mRNA-1:exon:801;Parent=Msa0710800-mRNA-1 |
chr5_1 | exon | 2563562 | 2563989 | 2563562 | ID=Msa0710800-mRNA-1:exon:802;Parent=Msa0710800-mRNA-1 |
chr5_1 | five_prime_UTR | 2560682 | 2560932 | 2560682 | ID=Msa0710800-mRNA-1:five_prime_utr;Parent=Msa0710800-mRNA-1 |
chr5_1 | five_prime_UTR | 2561025 | 2561042 | 2561025 | ID=Msa0710800-mRNA-1:five_prime_utr;Parent=Msa0710800-mRNA-1 |
chr5_1 | CDS | 2561043 | 2561076 | 2561043 | ID=Msa0710800-mRNA-1:cds;Parent=Msa0710800-mRNA-1 |
chr5_1 | CDS | 2561207 | 2561403 | 2561207 | ID=Msa0710800-mRNA-1:cds;Parent=Msa0710800-mRNA-1 |
chr5_1 | CDS | 2563562 | 2563885 | 2563562 | ID=Msa0710800-mRNA-1:cds;Parent=Msa0710800-mRNA-1 |
chr5_1 | three_prime_UTR | 2563886 | 2563989 | 2563886 | ID=Msa0710800-mRNA-1:three_prime_utr;Parent=Msa0710800-mRNA-1 |
Gene Sequence |
Protein sequence |