AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1458790

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1458790 MtrunA17_Chr7g0269871 98.903 638 7 0 42 679 134 771 0.0 1311
Msa1458790 MtrunA17_Chr1g0194841 83.725 639 101 2 42 679 129 765 0.0 1131
Msa1458790 MtrunA17_Chr2g0294751 70.206 631 178 4 42 670 133 755 0.0 929
Msa1458790 MtrunA17_Chr4g0050591 58.019 636 250 6 42 669 146 772 0.0 758
Msa1458790 MtrunA17_Chr2g0278761 57.978 633 257 5 42 670 147 774 0.0 757
Msa1458790 MtrunA17_Chr1g0207281 53.407 631 282 6 42 661 146 775 0.0 678
Msa1458790 MtrunA17_Chr5g0411571 47.920 649 309 10 46 670 138 781 0.0 648
Msa1458790 MtrunA17_Chr3g0115601 47.287 645 309 12 46 669 140 774 0.0 598
Msa1458790 MtrunA17_Chr5g0425471 46.894 644 321 10 42 669 142 780 0.0 595
Msa1458790 MtrunA17_Chr5g0425431 46.368 647 320 12 42 669 140 778 0.0 590
Msa1458790 MtrunA17_Chr5g0425451 46.319 652 323 12 42 674 142 785 0.0 587
Msa1458790 MtrunA17_Chr5g0425531 45.186 644 333 10 42 669 144 783 0.0 580
Msa1458790 MtrunA17_Chr3g0104081 28.294 463 275 22 55 487 154 589 4.91e-33 135
Msa1458790 MtrunA17_Chr6g0461221 27.096 513 303 22 46 530 153 622 6.00e-33 135
Msa1458790 MtrunA17_Chr6g0461231 28.770 504 289 22 55 530 160 621 1.33e-32 133
Msa1458790 MtrunA17_Chr6g0461191 27.922 462 278 19 55 487 160 595 2.37e-31 129
Msa1458790 MtrunA17_Chr5g0429581 26.078 464 284 19 55 487 138 573 8.10e-29 122
Msa1458790 MtrunA17_Chr5g0429541 26.211 454 267 20 62 487 146 559 1.97e-27 117
Msa1458790 MtrunA17_Chr7g0253561 25.391 512 296 24 55 530 136 597 1.24e-25 112
Msa1458790 MtrunA17_Chr2g0292341 28.235 510 284 27 55 530 162 623 3.09e-25 111
Msa1458790 MtrunA17_Chr3g0118971 27.680 513 283 28 55 530 160 621 4.33e-25 110
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1458790 AT1G02640.1 74.804 639 154 3 42 679 136 768 0.0 1009
Msa1458790 AT5G49360.1 70.283 636 181 7 42 672 141 773 0.0 907
Msa1458790 AT5G64570.1 60.126 637 242 7 42 670 151 783 0.0 769
Msa1458790 AT5G64570.2 59.777 629 241 7 50 670 1 625 0.0 757
Msa1458790 AT5G09730.1 57.165 635 261 6 42 669 141 771 0.0 745
Msa1458790 AT3G19620.1 52.932 631 281 6 42 661 133 758 0.0 694
Msa1458790 AT5G10560.1 46.828 662 313 10 43 670 135 791 0.0 619
Msa1458790 AT1G78060.1 47.096 637 313 10 42 662 130 758 0.0 613
Msa1458790 AT5G64570.3 66.441 444 144 3 42 482 151 592 0.0 604
Msa1458790 AT5G09700.1 52.549 510 221 8 176 669 20 524 5.28e-178 517
Msa1458790 AT3G47000.1 30.556 468 259 21 55 487 142 578 6.69e-36 144
Msa1458790 AT3G47050.1 29.476 458 266 18 61 489 149 578 7.39e-35 140
Msa1458790 AT3G47040.1 27.586 464 269 18 61 489 174 605 1.63e-33 137
Msa1458790 AT3G47040.4 27.586 464 269 18 61 489 149 580 1.70e-33 136
Msa1458790 AT3G47010.1 26.957 460 286 19 55 487 143 579 1.97e-29 124
Msa1458790 AT3G47010.2 26.957 460 285 20 55 487 143 578 6.02e-28 119
Msa1458790 AT3G47000.2 28.873 426 245 18 93 487 3 401 1.31e-27 116
Msa1458790 AT3G62710.1 25.349 501 306 21 61 529 184 648 2.22e-27 118
Msa1458790 AT3G47040.2 26.562 448 262 18 77 489 198 613 1.52e-26 115
Msa1458790 AT3G47000.3 33.108 296 166 13 55 330 142 425 1.55e-26 113
Msa1458790 AT5G04885.2 27.932 469 268 20 55 487 179 613 1.23e-25 112
Msa1458790 AT5G04885.3 27.932 469 268 20 55 487 162 596 1.99e-25 112
Msa1458790 AT5G04885.1 27.932 469 268 20 55 487 162 596 1.99e-25 112
Msa1458790 AT3G47010.3 27.400 427 254 19 77 487 14 400 8.07e-25 108
Msa1458790 AT3G47040.3 30.000 290 170 11 61 330 149 425 1.88e-24 107
Msa1458790 AT5G20950.3 28.205 507 287 25 55 530 236 696 8.50e-23 103
Msa1458790 AT5G20950.2 28.205 507 287 25 55 530 158 618 1.40e-22 103
Msa1458790 AT5G20950.1 28.205 507 287 25 55 530 158 618 1.40e-22 103
Msa1458790 AT3G47010.4 28.344 314 191 12 55 347 143 443 1.84e-21 98.6
Msa1458790 AT5G20940.1 26.044 503 299 21 55 529 164 621 2.49e-21 99.4
Msa1458790 AT3G47050.2 29.911 224 135 7 61 269 149 365 1.73e-16 82.4

Find 201 sgRNAs with CRISPR-Local

Find 538 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGTATTCTCCCATTTCTTTC+TGG 0.085241 tig0039788:-7964 Msa1458790:three_prime_UTR
CAGCTTATGATGTTGATAAT+TGG 0.194676 tig0039788:-12930 Msa1458790:CDS
CATATTGTGGGCGGGTTATC+CGG 0.194753 tig0039788:-8901 Msa1458790:CDS
TGTAGAGATGATAAACAATT+TGG 0.195462 tig0039788:-9152 Msa1458790:CDS
TTAATAAAACTTCTAGCTTT+TGG 0.207770 tig0039788:-7921 Msa1458790:three_prime_UTR
CACAATATGCCAGCAACTTT+GGG 0.214900 tig0039788:+8915 Msa1458790:intergenic
ATCAAAGGGACCAACTATTT+TGG 0.216528 tig0039788:-8985 Msa1458790:CDS
GAGCAGCAGGGTTAACTTAT+TGG 0.223733 tig0039788:-13116 Msa1458790:CDS
AAGCATCAACTGTGAGATTT+TGG 0.226166 tig0039788:-14922 Msa1458790:intron
AGAAATTTGTTGATATATAT+TGG 0.229876 tig0039788:-8101 Msa1458790:three_prime_UTR
GCTGGTTTACACACATCTTT+AGG 0.235705 tig0039788:+9620 Msa1458790:intergenic
CATTTCTTTCTGGTTTGTTT+AGG 0.247030 tig0039788:-7954 Msa1458790:three_prime_UTR
AGAAAACAGTTCGTGGAGTA+TGG 0.252637 tig0039788:-10389 Msa1458790:CDS
ACACATTTGATGTACCATTT+AGG 0.259080 tig0039788:-10503 Msa1458790:CDS
CTTAGTGTAGTTGATAAATC+TGG 0.274887 tig0039788:-8248 Msa1458790:CDS
TTGAATACTATGATGGCTTT+TGG 0.279747 tig0039788:-7888 Msa1458790:three_prime_UTR
CACCGAACTGTGGCTGTCAT+TGG 0.298747 tig0039788:-9509 Msa1458790:CDS
GAGCCATCAGCTCAAGCTTA+TGG 0.309828 tig0039788:-9653 Msa1458790:CDS
TAGAATCTATATGTTCTTCC+TGG 0.310906 tig0039788:+8638 Msa1458790:intergenic
TCCTTCACACACATCCTAAA+TGG 0.314863 tig0039788:+10489 Msa1458790:intergenic
CCACAGTTCGGTGGCGTTGT+GGG 0.316217 tig0039788:+9519 Msa1458790:intergenic
GCATCAGCAGCAGCTTCTTC+TGG 0.323818 tig0039788:+10185 Msa1458790:intergenic
AAACTTGGCCATGACAAATA+TGG 0.327012 tig0039788:-8687 Msa1458790:CDS
GGTAACCGTGACATCGGAAT+TGG 0.330315 tig0039788:+9484 Msa1458790:intergenic
TGATGTTGCAGGTTTGGATT+TGG 0.335227 tig0039788:-9804 Msa1458790:intron
CCACAATATGCCAGCAACTT+TGG 0.338607 tig0039788:+8914 Msa1458790:intergenic
ATGGAACTAGCCTGCTTTGA+TGG 0.341997 tig0039788:+10163 Msa1458790:intergenic
TCAACAAATTTCTCTTTGAA+TGG 0.350820 tig0039788:+8111 Msa1458790:intergenic
CTGGTTTACACACATCTTTA+GGG 0.352334 tig0039788:+9621 Msa1458790:intergenic
CCTGGGTACCCTACTTTGCT+TGG 0.352787 tig0039788:+8656 Msa1458790:intergenic
TCTCTGAAAATGTTCACATT+TGG 0.361641 tig0039788:+13090 Msa1458790:intergenic
ATATCTTCCTATTCCTTGTA+AGG 0.364137 tig0039788:+9214 Msa1458790:intergenic
GATGTCACGGTTACCATGAT+TGG 0.364588 tig0039788:-9476 Msa1458790:CDS
CTGCATGACGAGCTGCATCC+AGG 0.369023 tig0039788:+9123 Msa1458790:intergenic
TTGAAGGTGCAAATGAGATT+AGG 0.389022 tig0039788:-9689 Msa1458790:CDS
TGAAGGTGCAAATGAGATTA+GGG 0.389563 tig0039788:-9688 Msa1458790:CDS
CGTGGAGTATGGGGTCTTGA+TGG 0.390124 tig0039788:-10378 Msa1458790:CDS
CAGGTTTGGATTTGGATTGT+GGG 0.390524 tig0039788:-9796 Msa1458790:CDS
ATATGCTGCTAGTTATGTTA+AGG 0.395057 tig0039788:-13010 Msa1458790:CDS
CATTGGTGATGTTAAGCATT+CGG 0.398561 tig0039788:-8189 Msa1458790:CDS
CAGTTTCAGCTTCTATAGAT+TGG 0.401045 tig0039788:+9072 Msa1458790:intergenic
TTCCTTGTCTAGCAGCTTCA+AGG 0.402963 tig0039788:+9582 Msa1458790:intergenic
TCCTATTCCTTGTAAGGGGC+TGG 0.406262 tig0039788:+9220 Msa1458790:intergenic
TTGGATTGTGGGCCTTTCCT+AGG 0.413334 tig0039788:-9785 Msa1458790:CDS
CTAAACAAACCAGAAAGAAA+TGG 0.414032 tig0039788:+7955 Msa1458790:intergenic
TATCTGATTGTGACTCTGTC+GGG 0.415127 tig0039788:-10241 Msa1458790:CDS
AAGAATGACCCCAAAGTTGC+TGG 0.415236 tig0039788:-8924 Msa1458790:CDS
ATATTGTGGGCGGGTTATCC+GGG 0.415597 tig0039788:-8900 Msa1458790:CDS
TGCTAAGACTATTCATCAGC+TGG 0.416662 tig0039788:-9192 Msa1458790:CDS
GTGTTCTCTGCTCCACCTAA+TGG 0.418795 tig0039788:-8377 Msa1458790:CDS
GTAGAGATGATAAACAATTT+GGG 0.420072 tig0039788:-9151 Msa1458790:CDS
ACCCTTTGCTTAGTCTTGGC+AGG 0.421505 tig0039788:+8299 Msa1458790:intergenic
ACCAGCATAGTTTCCAATCA+TGG 0.422540 tig0039788:+9463 Msa1458790:intergenic
TCTACTCCTTTCTGTCCCTT+CGG 0.422734 tig0039788:+14999 Msa1458790:intergenic
GGACCAGTCGTGTATCCATT+TGG 0.427074 tig0039788:-8611 Msa1458790:CDS
ATGAGATTAGGGATGTTTGA+TGG 0.429107 tig0039788:-9677 Msa1458790:CDS
TCTTGAAGAGAAGACATGTT+AGG 0.429216 tig0039788:-8072 Msa1458790:three_prime_UTR
ATCAATATTGAATACTATGA+TGG 0.430187 tig0039788:-7895 Msa1458790:three_prime_UTR
ACCGAACTGTGGCTGTCATT+GGG 0.431191 tig0039788:-9508 Msa1458790:CDS
CCCTAGGTGGGGTCGTGGAC+AGG 0.431303 tig0039788:-13067 Msa1458790:CDS
ATCAAATTATTTGACAGTAA+TGG 0.436277 tig0039788:+8040 Msa1458790:intergenic
TAGTTATGTTAAGGGGCTAC+AGG 0.438276 tig0039788:-13001 Msa1458790:CDS
ATGTACAATGGAGGAGCAGC+AGG 0.438394 tig0039788:-13129 Msa1458790:CDS
GTTCTTACAATCAAGTGAAT+GGG 0.439277 tig0039788:-10443 Msa1458790:CDS
TGTTCTTACAATCAAGTGAA+TGG 0.443382 tig0039788:-10444 Msa1458790:CDS
TAGTTGATAAATCTGGGATT+AGG 0.446021 tig0039788:-8241 Msa1458790:CDS
AGGGCTAGCTCTTGATGAGC+TGG 0.446584 tig0039788:+9602 Msa1458790:intergenic
TATGCTGCTAGTTATGTTAA+GGG 0.454987 tig0039788:-13009 Msa1458790:CDS
GCAGGTTTGGATTTGGATTG+TGG 0.455155 tig0039788:-9797 Msa1458790:intron
TAGAAGCTGAAACTGTTGAT+AGG 0.459634 tig0039788:-9064 Msa1458790:CDS
CCAAAGTTGCTGGCATATTG+TGG 0.466892 tig0039788:-8914 Msa1458790:CDS
GCGGGTTATCCGGGCCAAGC+TGG 0.466906 tig0039788:-8891 Msa1458790:CDS
ACCCACAGTGGTGTCAGTTC+CGG 0.467398 tig0039788:-8543 Msa1458790:CDS
TAAACAAACCAGAAAGAAAT+GGG 0.467943 tig0039788:+7956 Msa1458790:intergenic
CACCTAATGGAGGTAACCAT+TGG 0.473068 tig0039788:-8364 Msa1458790:CDS
GCCACAGTTCGGTGGCGTTG+TGG 0.473664 tig0039788:+9518 Msa1458790:intergenic
TCGCTTTCACTTTAATGCAC+TGG 0.473826 tig0039788:-12896 Msa1458790:intron
GCTGCTGATGCCATCAAAGC+AGG 0.474540 tig0039788:-10173 Msa1458790:intron
GGCTAGCACAGGGTCTTCAC+CGG 0.476107 tig0039788:+13038 Msa1458790:intergenic
TGACGAGCTGCATCCAGGGC+AGG 0.482328 tig0039788:+9128 Msa1458790:intergenic
AACGATTTGTTAAAATCGAA+AGG 0.482576 tig0039788:-14968 Msa1458790:CDS
GAAAACAGTTCGTGGAGTAT+GGG 0.482826 tig0039788:-10388 Msa1458790:CDS
TCTAACCCTTTGCTTAGTCT+TGG 0.483430 tig0039788:+8295 Msa1458790:intergenic
CTTCCATAAGCTTGAGCTGA+TGG 0.483514 tig0039788:+9650 Msa1458790:intergenic
TTAGTGTAGTTGATAAATCT+GGG 0.485145 tig0039788:-8247 Msa1458790:CDS
AAAGGTGGCAGCTGCATCAA+AGG 0.485467 tig0039788:-9000 Msa1458790:CDS
TCACTTCAAGCAGAAGCACT+TGG 0.485778 tig0039788:-8164 Msa1458790:CDS
ACAAGATCTTGTTGATGTCC+AGG 0.487972 tig0039788:+9026 Msa1458790:intergenic
CTCTTAAAGAAAACAGTTCG+TGG 0.489484 tig0039788:-10396 Msa1458790:CDS
GTAACCGTGACATCGGAATT+GGG 0.491717 tig0039788:+9485 Msa1458790:intergenic
GACATCAAAACCAAAATAGT+TGG 0.492876 tig0039788:+8975 Msa1458790:intergenic
GCAATGAGACCAAGCAAAGT+AGG 0.495961 tig0039788:-8665 Msa1458790:CDS
GACATCAACGTGAAGGGCAA+TGG 0.500448 tig0039788:+8439 Msa1458790:intergenic
CATCCTGTGTGTGCACTCCT+AGG 0.502179 tig0039788:+9768 Msa1458790:intergenic
TCTCATTGCCATATTTGTCA+TGG 0.504005 tig0039788:+8679 Msa1458790:intergenic
TCAACAAGATCTTGTTTCAA+AGG 0.504548 tig0039788:-9018 Msa1458790:CDS
CACTTCAAGCAGAAGCACTT+GGG 0.508608 tig0039788:-8163 Msa1458790:CDS
GCTCAAGCTTATGGAAGATT+AGG 0.511835 tig0039788:-9644 Msa1458790:CDS
AGGTTGTCTCGGACGAAGCA+AGG 0.514943 tig0039788:-13155 Msa1458790:CDS
TAAACAATTTGGGCCTGCCC+TGG 0.515041 tig0039788:-9141 Msa1458790:CDS
CACAGTTCGGTGGCGTTGTG+GGG 0.518272 tig0039788:+9520 Msa1458790:intergenic
GCCCAATGACAGCCACAGTT+CGG 0.519148 tig0039788:+9507 Msa1458790:intergenic
GCAGCACCACCAGCTTGGCC+CGG 0.519379 tig0039788:+8882 Msa1458790:intergenic
AGAGACCCTAGGTGGGGTCG+TGG 0.519726 tig0039788:-13072 Msa1458790:CDS
CAAAGTTGCTGGCATATTGT+GGG 0.520314 tig0039788:-8913 Msa1458790:CDS
ACGATTTGTTAAAATCGAAA+GGG 0.520607 tig0039788:-14967 Msa1458790:CDS
TATGTTAATCCATGTCCAAA+TGG 0.521339 tig0039788:+8596 Msa1458790:intergenic
TGGTAATGTGCAGGTTGTCT+CGG 0.521800 tig0039788:-13166 Msa1458790:intron
CAATTGCAGCACCACCAGCT+TGG 0.522386 tig0039788:+8877 Msa1458790:intergenic
ACCAGCCCCTTACAAGGAAT+AGG 0.526197 tig0039788:-9221 Msa1458790:CDS
GTATCTGATTGTGACTCTGT+CGG 0.526814 tig0039788:-10242 Msa1458790:CDS
AGCAGATGTGAATAATGCTT+TGG 0.527568 tig0039788:-9720 Msa1458790:CDS
TCCTTGTCTAGCAGCTTCAA+GGG 0.531276 tig0039788:+9583 Msa1458790:intergenic
GTGGAGTATGGGGTCTTGAT+GGG 0.536335 tig0039788:-10377 Msa1458790:intron
TGAAGACTATGTTCTCCCAT+TGG 0.537870 tig0039788:+8212 Msa1458790:intergenic
GGTTATCCGGGCCAAGCTGG+TGG 0.539763 tig0039788:-8888 Msa1458790:CDS
ACCATGATTGGAAACTATGC+TGG 0.540156 tig0039788:-9464 Msa1458790:intron
ATCTTCCTATTCCTTGTAAG+GGG 0.540564 tig0039788:+9216 Msa1458790:intergenic
TGCTTTGGTGAATACATTGA+AGG 0.541919 tig0039788:-9705 Msa1458790:CDS
GGTGAAGACCCTGTGCTAGC+CGG 0.542174 tig0039788:-13036 Msa1458790:CDS
GAACTTTCTCAAAAGCAACT+AGG 0.543425 tig0039788:+8327 Msa1458790:intergenic
ACCTAATGGAGGTAACCATT+GGG 0.543629 tig0039788:-8363 Msa1458790:CDS
CCAAGCAAAGTAGGGTACCC+AGG 0.543790 tig0039788:-8656 Msa1458790:CDS
GCCCTTGAAGCTGCTAGACA+AGG 0.546317 tig0039788:-9584 Msa1458790:CDS
GGATATACCAGCCCCTTACA+AGG 0.548943 tig0039788:-9227 Msa1458790:CDS
ACCCAATGGTTACCTCCATT+AGG 0.549144 tig0039788:+8362 Msa1458790:intergenic
AGATGCAACTATTCTAGTGA+TGG 0.551163 tig0039788:-9102 Msa1458790:CDS
TTTGATGTCTGGTGGGCCTG+TGG 0.554424 tig0039788:-8961 Msa1458790:CDS
GCTGAAACTGTTGATAGGAC+TGG 0.555249 tig0039788:-9059 Msa1458790:CDS
AACTATTCTAGTGATGGGCT+TGG 0.555622 tig0039788:-9096 Msa1458790:CDS
AGAATCTATATGTTCTTCCT+GGG 0.555805 tig0039788:+8639 Msa1458790:intergenic
CGGTGGCGTTGTGGGGAGAG+AGG 0.555922 tig0039788:+9527 Msa1458790:intergenic
TATCTTCCTATTCCTTGTAA+GGG 0.556757 tig0039788:+9215 Msa1458790:intergenic
TCTTGTGGGTACCATGTCAC+TGG 0.557428 tig0039788:+8719 Msa1458790:intergenic
GTGGTGTCAGTTCCGGTGCA+TGG 0.558892 tig0039788:-8536 Msa1458790:CDS
CCTGTCCACGACCCCACCTA+GGG 0.559266 tig0039788:+13067 Msa1458790:intergenic
GTTGCTGGCATATTGTGGGC+GGG 0.561514 tig0039788:-8909 Msa1458790:CDS
AAGGTGGCAGCTGCATCAAA+GGG 0.563006 tig0039788:-8999 Msa1458790:CDS
CACAGTTGATGCTTCCTGTG+CGG 0.564132 tig0039788:+14931 Msa1458790:intergenic
TGCATGACGAGCTGCATCCA+GGG 0.565292 tig0039788:+9124 Msa1458790:intergenic
GGTTGTCTCGGACGAAGCAA+GGG 0.566041 tig0039788:-13154 Msa1458790:CDS
GGTTTGGATCAGCACATGTA+GGG 0.567867 tig0039788:+10418 Msa1458790:intergenic
TCCTGCCAAGACTAAGCAAA+GGG 0.568141 tig0039788:-8300 Msa1458790:CDS
CTGGCGTTGATGCATAATGC+TGG 0.569194 tig0039788:+10204 Msa1458790:intergenic
CAATGAGACCAAGCAAAGTA+GGG 0.570464 tig0039788:-8664 Msa1458790:CDS
AGTTGCTGGCATATTGTGGG+CGG 0.571075 tig0039788:-8910 Msa1458790:CDS
AGGTTTGGATCAGCACATGT+AGG 0.572366 tig0039788:+10417 Msa1458790:intergenic
TGGGATTAGGAGAATTCCAA+TGG 0.575301 tig0039788:-8228 Msa1458790:CDS
AACAGACGGTAACAAGTTGA+AGG 0.575857 tig0039788:-12977 Msa1458790:CDS
ACAAGATCTTGTTTCAAAGG+TGG 0.576713 tig0039788:-9015 Msa1458790:CDS
TTTAGGATGTGTGTGAAGGA+AGG 0.580245 tig0039788:-10486 Msa1458790:CDS
TGTGGGGAGAGAGGCAAAGT+AGG 0.580629 tig0039788:+9536 Msa1458790:intergenic
GAGAAGAGAGAAAACCGCAC+AGG 0.582840 tig0039788:-14945 Msa1458790:CDS
TCCTGTCCACGACCCCACCT+AGG 0.586492 tig0039788:+13066 Msa1458790:intergenic
TTTGCAAAAGTAATGTCCAC+AGG 0.587976 tig0039788:+8945 Msa1458790:intergenic
AAGAACACTCTTAATACCGA+AGG 0.589835 tig0039788:-15015 Msa1458790:CDS
GATGCAACTATTCTAGTGAT+GGG 0.593173 tig0039788:-9101 Msa1458790:CDS
TATGATGTTGATAATTGGAA+TGG 0.597120 tig0039788:-12925 Msa1458790:CDS
GCTAGCACAGGGTCTTCACC+GGG 0.600172 tig0039788:+13039 Msa1458790:intergenic
GGTCGTGGACAGGAAACTCC+CGG 0.600572 tig0039788:-13057 Msa1458790:CDS
ATAACTAGCAGCATATCTAC+CGG 0.601845 tig0039788:+13017 Msa1458790:intergenic
AAAACAGTTCGTGGAGTATG+GGG 0.604096 tig0039788:-10387 Msa1458790:CDS
CCGGTGCATGGTCATCGACA+TGG 0.604267 tig0039788:-8524 Msa1458790:CDS
CCATGTCGATGACCATGCAC+CGG 0.604288 tig0039788:+8524 Msa1458790:intergenic
TTAATACCGAAGGGACAGAA+AGG 0.604841 tig0039788:-15005 Msa1458790:CDS
GGGATTAGGAGAATTCCAAT+GGG 0.606939 tig0039788:-8227 Msa1458790:CDS
TGGGCCCAATTCCGATGTCA+CGG 0.607511 tig0039788:-9489 Msa1458790:CDS
AGTTATGTTAAGGGGCTACA+GGG 0.608059 tig0039788:-13000 Msa1458790:CDS
GAAGCAAGGGCAATGTACAA+TGG 0.608620 tig0039788:-13141 Msa1458790:CDS
GCTAAGACTATTCATCAGCT+GGG 0.609180 tig0039788:-9191 Msa1458790:CDS
CCCACAACGCCACCGAACTG+TGG 0.609536 tig0039788:-9519 Msa1458790:CDS
TTATTTGGAACTGCTAACCC+AGG 0.613155 tig0039788:-8846 Msa1458790:intron
CATATCTACCGGCTAGCACA+GGG 0.613295 tig0039788:+13028 Msa1458790:intergenic
TGTCCAAATGGATACACGAC+TGG 0.615694 tig0039788:+8608 Msa1458790:intergenic
GTCGTGTATCCATTTGGACA+TGG 0.617686 tig0039788:-8605 Msa1458790:CDS
AATCATGGTAACCGTGACAT+CGG 0.617822 tig0039788:+9478 Msa1458790:intergenic
TGTGTGTGCACTCCTAGGAA+AGG 0.626000 tig0039788:+9773 Msa1458790:intergenic
TTCCTGCCAAGACTAAGCAA+AGG 0.628706 tig0039788:-8301 Msa1458790:CDS
ATGCTGCTAGTTATGTTAAG+GGG 0.628737 tig0039788:-13008 Msa1458790:CDS
AGAACACTCTTAATACCGAA+GGG 0.630338 tig0039788:-15014 Msa1458790:CDS
CAATGGTTACCTCCATTAGG+TGG 0.633526 tig0039788:+8365 Msa1458790:intergenic
ACAATATGCCAGCAACTTTG+GGG 0.637083 tig0039788:+8916 Msa1458790:intergenic
AGAGTGACACATGCAAGATG+TGG 0.638729 tig0039788:-8470 Msa1458790:CDS
CAATGACAGCCACAGTTCGG+TGG 0.639734 tig0039788:+9510 Msa1458790:intergenic
TTCTTACAATCAAGTGAATG+GGG 0.643775 tig0039788:-10442 Msa1458790:CDS
TTCTCTGCTCCACCTAATGG+AGG 0.650493 tig0039788:-8374 Msa1458790:CDS
AAGAACATATAGATTCTACA+AGG 0.651377 tig0039788:-8633 Msa1458790:CDS
AAGGGGCTACAGGGAACAGA+CGG 0.652426 tig0039788:-12991 Msa1458790:CDS
TGTTGATAATTGGAATGGTG+TGG 0.652811 tig0039788:-12920 Msa1458790:CDS
GCAAGGGCAATGTACAATGG+AGG 0.657866 tig0039788:-13138 Msa1458790:CDS
ACCATTTAGGATGTGTGTGA+AGG 0.662576 tig0039788:-10490 Msa1458790:CDS
ATCTGATTGTGACTCTGTCG+GGG 0.668063 tig0039788:-10240 Msa1458790:CDS
GGAGAACATAGTCTTCACAT+TGG 0.674389 tig0039788:-8206 Msa1458790:CDS
ACCGGAACTGACACCACTGT+GGG 0.678978 tig0039788:+8542 Msa1458790:intergenic
GAGGCAAGCTACCAGTGACA+TGG 0.683941 tig0039788:-8730 Msa1458790:CDS
TGTACAATGGAGGAGCAGCA+GGG 0.698546 tig0039788:-13128 Msa1458790:CDS
AGACGGTAACAAGTTGAAGG+TGG 0.701591 tig0039788:-12974 Msa1458790:CDS
AGAACATATAGATTCTACAA+GGG 0.708494 tig0039788:-8632 Msa1458790:CDS
ATTATCTAGTGCACCCACAG+TGG 0.712988 tig0039788:-8555 Msa1458790:CDS
TTTCCTAGGAGTGCACACAC+AGG 0.714417 tig0039788:-9771 Msa1458790:CDS
CACCGGAACTGACACCACTG+TGG 0.731462 tig0039788:+8541 Msa1458780:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AGTTAATATAATAAACTTTT+TGG + tig0039788:10128-10147 Msa1458790:intergenic 10.0%
!!! TTGTTTTTCAATTTTTTTTA+TGG - tig0039788:10896-10915 Msa1458790:intron 10.0%
!!! GATTTAATTAATTTGTATTT+TGG - tig0039788:11307-11326 Msa1458790:intron 10.0%
!!! TGATTTAATATTTTTTTAAG+TGG + tig0039788:11552-11571 Msa1458790:intergenic 10.0%
!!! TAAAATATTTTTGAATAAGA+GGG + tig0039788:12894-12913 Msa1458790:intergenic 10.0%
!!! TAATAATTGTATTAGTTTAT+AGG + tig0039788:13995-14014 Msa1458790:intergenic 10.0%
!!! AATTACATTTTATTACTTAG+GGG + tig0039788:8397-8416 Msa1458790:intergenic 15.0%
!!! GAATTACATTTTATTACTTA+GGG + tig0039788:8398-8417 Msa1458790:intergenic 15.0%
!!! TGAATTACATTTTATTACTT+AGG + tig0039788:8399-8418 Msa1458790:intergenic 15.0%
!!! ATGTTTTTTTTTTTACTTGT+TGG + tig0039788:9522-9541 Msa1458790:intergenic 15.0%
!! AAAACTAATTAAAATTGAAC+AGG + tig0039788:9902-9921 Msa1458790:intergenic 15.0%
!!! AAAATTTATTAGTCTGAATT+TGG - tig0039788:10465-10484 Msa1458790:CDS 15.0%
!! TATCATTAATCACTTAAAAT+AGG - tig0039788:10582-10601 Msa1458790:intron 15.0%
!!! TTATTAATTTTTATTTGACC+AGG + tig0039788:10838-10857 Msa1458790:intergenic 15.0%
!! AAAATGGTTTAAATATTGTT+TGG - tig0039788:11257-11276 Msa1458790:intron 15.0%
!!! TTAATATTTTTTTAAGTGGA+TGG + tig0039788:11548-11567 Msa1458790:intergenic 15.0%
!!! CATGTTTTTTATTTTTGAAA+AGG - tig0039788:11862-11881 Msa1458790:intron 15.0%
!! TAATTGAATAACAGTTAATA+TGG + tig0039788:12633-12652 Msa1458790:intergenic 15.0%
!! AATTATCATATTAAATGTTG+AGG - tig0039788:12648-12667 Msa1458790:intron 15.0%
!!! TGGATGATATTTTTAATATT+TGG - tig0039788:12703-12722 Msa1458790:intron 15.0%
!!! GTAAAATATTTTTGAATAAG+AGG + tig0039788:12895-12914 Msa1458790:intergenic 15.0%
!!! ATAAGAAAACATGTTTTTAT+AGG - tig0039788:13507-13526 Msa1458790:intron 15.0%
!!! AGAAATTTGTTGATATATAT+TGG - tig0039788:14666-14685 Msa1458790:intron 15.0%
!!! ATAAAATTGTTTGCAATTTT+TGG - tig0039788:14748-14767 Msa1458790:intron 15.0%
!!! TAAAATTGTTTGCAATTTTT+GGG - tig0039788:14749-14768 Msa1458790:intron 15.0%
!! ATCTTATAAAAATGATAGAA+AGG + tig0039788:14934-14953 Msa1458790:intergenic 15.0%
!!! TTTCTATCATTTTTATAAGA+TGG - tig0039788:14933-14952 Msa1458790:CDS 15.0%
!!! TTCTATCATTTTTATAAGAT+GGG - tig0039788:14934-14953 Msa1458790:CDS 15.0%
!!! TTTTCTTAATTGGAAATATC+CGG - tig0039788:8001-8020 Msa1458790:three_prime_UTR 20.0%
!! ACTAGTAAGTGTTTATATAT+GGG + tig0039788:8233-8252 Msa1458790:intergenic 20.0%
!! AACTAGTAAGTGTTTATATA+TGG + tig0039788:8234-8253 Msa1458790:intergenic 20.0%
!! ATATATAAACACTTACTAGT+TGG - tig0039788:8233-8252 Msa1458790:CDS 20.0%
!! TATATAAACACTTACTAGTT+GGG - tig0039788:8234-8253 Msa1458790:CDS 20.0%
!! TTAATTCTAGTGAAGAAAAT+TGG + tig0039788:8329-8348 Msa1458790:intergenic 20.0%
!!! TGAGAATCTTTTCAAATTAA+TGG - tig0039788:8619-8638 Msa1458790:CDS 20.0%
!! GTCTAAAAATTGTCATAAAA+TGG + tig0039788:8676-8695 Msa1458790:intergenic 20.0%
!! TATCATTGCTCTTATATAAA+AGG - tig0039788:8823-8842 Msa1458790:intron 20.0%
!! CTATATAAAAAATGGATGTA+CGG + tig0039788:8868-8887 Msa1458790:intergenic 20.0%
!!! GTACATCCATTTTTTATATA+GGG - tig0039788:8867-8886 Msa1458790:CDS 20.0%
!! CTAAAACCCTATATAAAAAA+TGG + tig0039788:8876-8895 Msa1458790:intergenic 20.0%
!! TCAAAATATCATTACTCTAT+TGG + tig0039788:9161-9180 Msa1458790:intergenic 20.0%
!! AAAATGTAAAATATTCAACG+AGG - tig0039788:9576-9595 Msa1458790:CDS 20.0%
!! AAATGTAAAATATTCAACGA+GGG - tig0039788:9577-9596 Msa1458790:CDS 20.0%
!!! ATATAATAAACTTTTTGGTC+AGG + tig0039788:10123-10142 Msa1458790:intergenic 20.0%
!!! TTTTCTTATCTGTTTGTTTT+TGG - tig0039788:10255-10274 Msa1458790:intron 20.0%
!!! AATGTTTTTGTTCATGTTTT+TGG + tig0039788:10381-10400 Msa1458790:intergenic 20.0%
!! ATTTACACCTAAATTTATGT+TGG - tig0039788:10519-10538 Msa1458790:CDS 20.0%
!!! TTTGTTAAGTTTTTCTACAA+AGG + tig0039788:10777-10796 Msa1458790:intergenic 20.0%
!!! AAATGGTGAATTGAATTTTT+GGG + tig0039788:11149-11168 Msa1458790:intergenic 20.0%
!!! AAAATGGTGAATTGAATTTT+TGG + tig0039788:11150-11169 Msa1458790:intergenic 20.0%
!!! ATTTTCGTTGATAGAAAAAA+TGG - tig0039788:11241-11260 Msa1458790:intron 20.0%
!! TAACTTTATATCATTTGAAG+AGG + tig0039788:11442-11461 Msa1458790:intergenic 20.0%
!! AAGTTATTTAATCCATATGT+AGG - tig0039788:11456-11475 Msa1458790:intron 20.0%
!! AGTTATTTAATCCATATGTA+GGG - tig0039788:11457-11476 Msa1458790:intron 20.0%
!!! AACCAATTTATTTTAAGAGT+GGG + tig0039788:11632-11651 Msa1458790:intergenic 20.0%
!! AAACATGTTTGTATATTCAT+GGG + tig0039788:11849-11868 Msa1458790:intergenic 20.0%
!! AAAACATGTTTGTATATTCA+TGG + tig0039788:11850-11869 Msa1458790:intergenic 20.0%
!!! TTTTACTTGATAATGAGATA+AGG + tig0039788:12460-12479 Msa1458790:intergenic 20.0%
!! ATAACAGTTAATATGGTTTA+TGG + tig0039788:12626-12645 Msa1458790:intergenic 20.0%
!!! AACATTGATTTTATACTTCT+TGG + tig0039788:12925-12944 Msa1458790:intergenic 20.0%
!!! TTTTTTAAAAATGATGTTGC+AGG - tig0039788:12952-12971 Msa1458790:CDS 20.0%
!!! TAAAAAATCGATTTGAACTT+AGG + tig0039788:13361-13380 Msa1458790:intergenic 20.0%
!! ATAATTACAATACGAATCAA+AGG + tig0039788:13476-13495 Msa1458790:intergenic 20.0%
!! ATCAAATTATTTGACAGTAA+TGG + tig0039788:14730-14749 Msa1458790:intergenic 20.0%
!!! TTAATAAAACTTCTAGCTTT+TGG - tig0039788:14846-14865 Msa1458790:intron 20.0%
!! ATCAATATTGAATACTATGA+TGG - tig0039788:14872-14891 Msa1458790:intron 20.0%
!!! AACGATTTGTTAAAATCGAA+AGG - tig0039788:7799-7818 Msa1458790:three_prime_UTR 25.0%
!!! ACGATTTGTTAAAATCGAAA+GGG - tig0039788:7800-7819 Msa1458790:three_prime_UTR 25.0%
!! TTAAGTTTGCTTAATCCTTA+AGG - tig0039788:7921-7940 Msa1458790:three_prime_UTR 25.0%
! ATATAAACACTTACTAGTTG+GGG - tig0039788:8235-8254 Msa1458790:CDS 25.0%
! AATTGGAAAGAAAAACACTA+TGG + tig0039788:8312-8331 Msa1458790:intergenic 25.0%
! CATTGAGAATAACTATATGT+TGG + tig0039788:8360-8379 Msa1458790:intergenic 25.0%
! AAAACAATGAAGAGAGAAAA+AGG + tig0039788:8741-8760 Msa1458790:intergenic 25.0%
!!! TTTTTTCTCTCTCTTTTCAT+TGG + tig0039788:8767-8786 Msa1458790:intergenic 25.0%
! AATGAAAAGAGAGAGAAAAA+AGG - tig0039788:8766-8785 Msa1458790:intron 25.0%
!!! CGTACATCCATTTTTTATAT+AGG - tig0039788:8866-8885 Msa1458790:CDS 25.0%
!! AAGAACATGAATTCGATTTT+TGG + tig0039788:8929-8948 Msa1458790:intergenic 25.0%
!!! GATACTTTGAAATGTCTATA+GGG - tig0039788:9001-9020 Msa1458790:CDS 25.0%
! GAGGTCAAAAATTCTAATAA+AGG - tig0039788:9023-9042 Msa1458790:CDS 25.0%
! GTCAAAAATTCTAATAAAGG+TGG - tig0039788:9026-9045 Msa1458790:CDS 25.0%
! ATTAATTTCTCACAAAGCAA+GGG + tig0039788:9105-9124 Msa1458790:intergenic 25.0%
! TATCATTACTCTATTGGATT+GGG + tig0039788:9155-9174 Msa1458790:intergenic 25.0%
! ATATCATTACTCTATTGGAT+TGG + tig0039788:9156-9175 Msa1458790:intergenic 25.0%
! AATAAGAAGTGAGAAAAACA+AGG + tig0039788:9213-9232 Msa1458790:intergenic 25.0%
!!! TTGTTTTTCTCACTTCTTAT+TGG - tig0039788:9212-9231 Msa1458790:CDS 25.0%
! TTCTTATTGGTCAAAAACAA+TGG - tig0039788:9225-9244 Msa1458790:CDS 25.0%
! GTTCAAAAATTGTCAAAAAG+TGG - tig0039788:9305-9324 Msa1458790:intron 25.0%
! ATTTCTCAATCCAATAATGA+TGG - tig0039788:9341-9360 Msa1458790:intron 25.0%
! TTTCTCAATCCAATAATGAT+GGG - tig0039788:9342-9361 Msa1458790:intron 25.0%
! AACTTGTCTATCAATTTAGT+GGG - tig0039788:9423-9442 Msa1458790:intron 25.0%
!!! TATGATGTTGATAATTGGAA+TGG - tig0039788:9842-9861 Msa1458790:intron 25.0%
!!! TATCTGTTTGTTTTTGGATA+AGG - tig0039788:10261-10280 Msa1458790:intron 25.0%
! AAAACAATATTACCTCATGA+CGG + tig0039788:10312-10331 Msa1458790:intergenic 25.0%
! ATTTAAAGAATCGAACTTTG+TGG + tig0039788:10501-10520 Msa1458790:intergenic 25.0%
! CATTAATCACTTAAAATAGG+TGG - tig0039788:10585-10604 Msa1458790:intron 25.0%
! AAAAAGAAAACTTTCCTATG+GGG + tig0039788:10640-10659 Msa1458790:intergenic 25.0%
! GAAAAAGAAAACTTTCCTAT+GGG + tig0039788:10641-10660 Msa1458790:intergenic 25.0%
! TGAAAAAGAAAACTTTCCTA+TGG + tig0039788:10642-10661 Msa1458790:intergenic 25.0%
!!! TAGGAAAGTTTTCTTTTTCA+TGG - tig0039788:10642-10661 Msa1458790:intron 25.0%
! TTGTGAATAATTAGATAACC+TGG - tig0039788:10817-10836 Msa1458790:intron 25.0%
!!! AATTGAATTTTTGGGTGTTA+TGG + tig0039788:11141-11160 Msa1458790:intergenic 25.0%
! TCTATCAACGAAAATAGTAA+AGG + tig0039788:11236-11255 Msa1458790:intergenic 25.0%
! ATGGTTTAAATATTGTTTGG+AGG - tig0039788:11260-11279 Msa1458790:intron 25.0%
!!! TTTCAGTATCTTCATTTTTC+TGG + tig0039788:11400-11419 Msa1458790:intergenic 25.0%
!!! AATGGTTTGAAACTTTTTGT+TGG + tig0039788:11506-11525 Msa1458790:intergenic 25.0%
! TTATTAAACTTTCCCATCAT+GGG - tig0039788:11579-11598 Msa1458790:intron 25.0%
!!! ACCAATTTATTTTAAGAGTG+GGG + tig0039788:11631-11650 Msa1458790:intergenic 25.0%
!!! CAACCAATTTATTTTAAGAG+TGG + tig0039788:11633-11652 Msa1458790:intergenic 25.0%
! TGATAGTATAAAATGCTTGA+CGG - tig0039788:11910-11929 Msa1458790:intron 25.0%
!! TGCAATTTTCATACAATTAC+AGG + tig0039788:11947-11966 Msa1458790:intergenic 25.0%
!! TTTTGCAACATCATATTGTT+AGG - tig0039788:12092-12111 Msa1458790:intron 25.0%
! TTAGGCCATATATAGAAATA+TGG - tig0039788:12110-12129 Msa1458790:intron 25.0%
! ATGCATAATTGTGAAGTAAA+AGG + tig0039788:12139-12158 Msa1458790:intergenic 25.0%
!!! TGCACATTAAGTTTTATGTT+AGG + tig0039788:12221-12240 Msa1458790:intergenic 25.0%
! TAACATAAAACTTAATGTGC+AGG - tig0039788:12220-12239 Msa1458790:intron 25.0%
! TTGAACTTAGGCTTATAATT+GGG + tig0039788:13349-13368 Msa1458790:intergenic 25.0%
! TTTGAACTTAGGCTTATAAT+TGG + tig0039788:13350-13369 Msa1458790:intergenic 25.0%
!!! TCAAATCGATTTTTTAAACG+CGG - tig0039788:13365-13384 Msa1458790:intron 25.0%
! TGTAGAGATGATAAACAATT+TGG - tig0039788:13615-13634 Msa1458790:intron 25.0%
! GTAGAGATGATAAACAATTT+GGG - tig0039788:13616-13635 Msa1458790:intron 25.0%
! TTTATAGGCTATTTGCAATT+GGG + tig0039788:13980-13999 Msa1458790:intergenic 25.0%
! AAGAACATATAGATTCTACA+AGG - tig0039788:14134-14153 Msa1458790:intron 25.0%
! AGAACATATAGATTCTACAA+GGG - tig0039788:14135-14154 Msa1458790:intron 25.0%
!!! TTAGTGTAGTTGATAAATCT+GGG - tig0039788:14520-14539 Msa1458790:intron 25.0%
!! TTATCAAGTCTTGAATTTTC+AGG - tig0039788:14628-14647 Msa1458790:intron 25.0%
! TCAACAAATTTCTCTTTGAA+TGG + tig0039788:14659-14678 Msa1458790:intergenic 25.0%
! TAAACAAACCAGAAAGAAAT+GGG + tig0039788:14814-14833 Msa1458790:intergenic 25.0%
! ATAAAAATGATAGAAAGGAG+AGG + tig0039788:14929-14948 Msa1458790:intergenic 25.0%
! TTTTATAGGCAGAGTTACTT+GGG - tig0039788:7896-7915 Msa1458790:three_prime_UTR 30.0%
! AGCAAACGTGTTTTCTTAAT+TGG - tig0039788:7991-8010 Msa1458790:three_prime_UTR 30.0%
TAAAAATGTCCCACATTGAA+CGG + tig0039788:8264-8283 Msa1458790:intergenic 30.0%
TATGGAAAAAACTAGTGTGT+GGG + tig0039788:8294-8313 Msa1458790:intergenic 30.0%
CTTGCTAGCAATAATAATCA+GGG - tig0039788:8465-8484 Msa1458790:CDS 30.0%
ATCCCATGATCACAAAAATT+AGG + tig0039788:8587-8606 Msa1458790:intergenic 30.0%
! AATTTTTGTGATCATGGGAT+TGG - tig0039788:8587-8606 Msa1458790:CDS 30.0%
! ATTTTTGTGATCATGGGATT+GGG - tig0039788:8588-8607 Msa1458790:CDS 30.0%
GAGAAAAAAGGTTGTCAAAT+AGG - tig0039788:8778-8797 Msa1458790:intron 30.0%
GTCAAATAGGTTGTACTAAA+TGG - tig0039788:8791-8810 Msa1458790:intron 30.0%
! GAATGTGGTATTGAAAATGT+TGG + tig0039788:8975-8994 Msa1458790:intergenic 30.0%
!! GGATACTTTGAAATGTCTAT+AGG - tig0039788:9000-9019 Msa1458790:CDS 30.0%
GATTAATTTCTCACAAAGCA+AGG + tig0039788:9106-9125 Msa1458790:intergenic 30.0%
TGCTTTGTGAGAAATTAATC+AGG - tig0039788:9106-9125 Msa1458790:CDS 30.0%
TCAACAAAGTTGTCATCAAA+TGG + tig0039788:9187-9206 Msa1458790:intergenic 30.0%
AAAACAATGGAGAGAGAAAA+AGG - tig0039788:9238-9257 Msa1458790:CDS 30.0%
! ATTTTGTTCTGCTCACTTAT+TGG - tig0039788:9388-9407 Msa1458790:intron 30.0%
CAACTTGTCTATCAATTTAG+TGG - tig0039788:9422-9441 Msa1458790:intron 30.0%
CAAATTTGGAAAATTGTGAC+TGG + tig0039788:9493-9512 Msa1458790:intergenic 30.0%
! TCTCTGAAAATGTTCACATT+TGG + tig0039788:9680-9699 Msa1458790:intergenic 30.0%
ATATGCTGCTAGTTATGTTA+AGG - tig0039788:9757-9776 Msa1458790:CDS 30.0%
TATGCTGCTAGTTATGTTAA+GGG - tig0039788:9758-9777 Msa1458790:CDS 30.0%
!! CAGCTTATGATGTTGATAAT+TGG - tig0039788:9837-9856 Msa1458790:intron 30.0%
! TACTATAGTACACTTTTCCT+GGG + tig0039788:9988-10007 Msa1458790:intergenic 30.0%
ACTAGTAATTAAGCAGTTGA+TGG - tig0039788:10145-10164 Msa1458790:intron 30.0%
TGAAAGATCAATAGATAGAG+TGG - tig0039788:10188-10207 Msa1458790:CDS 30.0%
!!! TTTGTTCATGTTTTTGGTAC+AGG + tig0039788:10375-10394 Msa1458790:intergenic 30.0%
!! CTAATAAATTTTGACACACC+AGG + tig0039788:10457-10476 Msa1458790:intergenic 30.0%
GTAACTGCCAACATAAATTT+AGG + tig0039788:10529-10548 Msa1458790:intergenic 30.0%
AAATTTATGTTGGCAGTTAC+TGG - tig0039788:10529-10548 Msa1458790:intron 30.0%
AAAAGAAAACTTTCCTATGG+GGG + tig0039788:10639-10658 Msa1458790:intergenic 30.0%
AATCATAATTTCACCTACCA+TGG - tig0039788:11047-11066 Msa1458790:intron 30.0%
! TGACTTTTCACATGCAAAAA+TGG + tig0039788:11166-11185 Msa1458790:intergenic 30.0%
!!! GAGTTTTTTACAGAACAACA+TGG + tig0039788:11348-11367 Msa1458790:intergenic 30.0%
AAACTCATAAGAACAACACT+AGG - tig0039788:11362-11381 Msa1458790:intron 30.0%
TGGCTATTGTGTAACAAAAA+AGG + tig0039788:11486-11505 Msa1458790:intergenic 30.0%
AAAAGTTTCAAACCATTACC+AGG - tig0039788:11509-11528 Msa1458790:intron 30.0%
GTTATTAAACTTTCCCATCA+TGG - tig0039788:11578-11597 Msa1458790:intron 30.0%
ACCCCACTCTTAAAATAAAT+TGG - tig0039788:11627-11646 Msa1458790:intron 30.0%
TTATTGCACTTACATCAAGT+TGG - tig0039788:11738-11757 Msa1458790:intron 30.0%
GGTAAGCAAAATTACTATGT+AGG - tig0039788:11770-11789 Msa1458790:intron 30.0%
AAATTGCAGTGTTTGTGAAT+TGG - tig0039788:11959-11978 Msa1458790:intron 30.0%
AATTGCAGTGTTTGTGAATT+GGG - tig0039788:11960-11979 Msa1458790:intron 30.0%
TGGGAGAAACATAACATTAA+TGG - tig0039788:11979-11998 Msa1458790:intron 30.0%
GGGAGAAACATAACATTAAT+GGG - tig0039788:11980-11999 Msa1458790:intron 30.0%
ATAACATTAATGGGAGAAAG+CGG - tig0039788:11989-12008 Msa1458790:intron 30.0%
GCTCTTCAACTGAATTAAAA+TGG - tig0039788:12048-12067 Msa1458790:intron 30.0%
! GGCATCCATATTTCTATATA+TGG + tig0039788:12118-12137 Msa1458790:intergenic 30.0%
ATGCTCATAGACTATAACAT+AGG + tig0039788:12184-12203 Msa1458790:intergenic 30.0%
TATGTTATAGTCTATGAGCA+TGG - tig0039788:12183-12202 Msa1458790:intron 30.0%
ATGTTATAGTCTATGAGCAT+GGG - tig0039788:12184-12203 Msa1458790:intron 30.0%
ACACATTTGATGTACCATTT+AGG - tig0039788:12264-12283 Msa1458790:intron 30.0%
TGTTCTTACAATCAAGTGAA+TGG - tig0039788:12323-12342 Msa1458790:intron 30.0%
GTTCTTACAATCAAGTGAAT+GGG - tig0039788:12324-12343 Msa1458790:intron 30.0%
TTCTTACAATCAAGTGAATG+GGG - tig0039788:12325-12344 Msa1458790:intron 30.0%
!! ACTGTTTTCTTTAAGAGGTT+TGG + tig0039788:12368-12387 Msa1458790:intergenic 30.0%
! TCATCTCTTTTGCTTTACTT+GGG - tig0039788:12486-12505 Msa1458790:intron 30.0%
TGATGAATGTGATGACAAAT+TGG - tig0039788:12677-12696 Msa1458790:intron 30.0%
GATGAATGTGATGACAAATT+GGG - tig0039788:12678-12697 Msa1458790:intron 30.0%
TTCAGCAAATCAATGATTGT+TGG - tig0039788:12751-12770 Msa1458790:intron 30.0%
TAAAAATGATGTTGCAGGTT+TGG - tig0039788:12957-12976 Msa1458790:CDS 30.0%
ATTGTGCTTCTCAAAAACAA+TGG - tig0039788:13207-13226 Msa1458790:intron 30.0%
!! GTTTTTATAGGTATTGCATG+TGG - tig0039788:13519-13538 Msa1458790:intron 30.0%
TATCTTCCTATTCCTTGTAA+GGG + tig0039788:13555-13574 Msa1458790:intergenic 30.0%
ATATCTTCCTATTCCTTGTA+AGG + tig0039788:13556-13575 Msa1458790:intergenic 30.0%
! TCAACAAGATCTTGTTTCAA+AGG - tig0039788:13749-13768 Msa1458790:intron 30.0%
GACATCAAAACCAAAATAGT+TGG + tig0039788:13795-13814 Msa1458790:intergenic 30.0%
!!! ACTATTTTGGTTTTGATGTC+TGG - tig0039788:13795-13814 Msa1458790:intron 30.0%
! GCAATTGCTGACATTTTATT+TGG - tig0039788:13906-13925 Msa1458790:intron 30.0%
GTTTATAGGCTATTTGCAAT+TGG + tig0039788:13981-14000 Msa1458790:intergenic 30.0%
!!! AGTTTTTTAGGTACTCTTGT+GGG + tig0039788:14065-14084 Msa1458790:intergenic 30.0%
!!! AAGTTTTTTAGGTACTCTTG+TGG + tig0039788:14066-14085 Msa1458790:intergenic 30.0%
!! ACAAGAGTACCTAAAAAACT+TGG - tig0039788:14065-14084 Msa1458790:intron 30.0%
AGAATCTATATGTTCTTCCT+GGG + tig0039788:14131-14150 Msa1458790:intergenic 30.0%
TAGAATCTATATGTTCTTCC+TGG + tig0039788:14132-14151 Msa1458790:intergenic 30.0%
TATGTTAATCCATGTCCAAA+TGG + tig0039788:14174-14193 Msa1458790:intergenic 30.0%
! ATTTTTGACATCAACGTGAA+GGG + tig0039788:14337-14356 Msa1458790:intergenic 30.0%
!! CTTAGTGTAGTTGATAAATC+TGG - tig0039788:14519-14538 Msa1458790:intron 30.0%
!! TAGTTGATAAATCTGGGATT+AGG - tig0039788:14526-14545 Msa1458790:intron 30.0%
CTAAACAAACCAGAAAGAAA+TGG + tig0039788:14815-14834 Msa1458790:intergenic 30.0%
!! CATTTCTTTCTGGTTTGTTT+AGG - tig0039788:14813-14832 Msa1458790:intron 30.0%
! TTGAATACTATGATGGCTTT+TGG - tig0039788:14879-14898 Msa1458790:intron 30.0%
AAGAACACTCTTAATACCGA+AGG - tig0039788:7752-7771 Msa1458790:three_prime_UTR 35.0%
AGAACACTCTTAATACCGAA+GGG - tig0039788:7753-7772 Msa1458790:three_prime_UTR 35.0%
! AAGCATCAACTGTGAGATTT+TGG - tig0039788:7845-7864 Msa1458790:three_prime_UTR 35.0%
!! ATTTTGGTGTGAAGAATGAG+TGG - tig0039788:7861-7880 Msa1458790:three_prime_UTR 35.0%
!! TTTTGGTGTGAAGAATGAGT+GGG - tig0039788:7862-7881 Msa1458790:three_prime_UTR 35.0%
CAAGTAACTCTGCCTATAAA+AGG + tig0039788:7897-7916 Msa1458790:intergenic 35.0%
! CTTTTATAGGCAGAGTTACT+TGG - tig0039788:7895-7914 Msa1458790:three_prime_UTR 35.0%
TTTATAGGCAGAGTTACTTG+GGG - tig0039788:7897-7916 Msa1458790:three_prime_UTR 35.0%
TAAGAAAACACGTTTGCTTG+AGG + tig0039788:7989-8008 Msa1458790:intergenic 35.0%
CTATGGAAAAAACTAGTGTG+TGG + tig0039788:8295-8314 Msa1458790:intergenic 35.0%
! GCTTGCTAGCAATAATAATC+AGG - tig0039788:8464-8483 Msa1458790:CDS 35.0%
CCATGATCACAAAAATTAGG+CGG + tig0039788:8584-8603 Msa1458790:intergenic 35.0%
! CGCCTAATTTTTGTGATCAT+GGG - tig0039788:8582-8601 Msa1458790:CDS 35.0%
TTTCAATACCACATTCACGA+TGG - tig0039788:8979-8998 Msa1458790:CDS 35.0%
!! ACTTTGAAATGTCTATAGGG+AGG - tig0039788:9004-9023 Msa1458790:CDS 35.0%
ACATATCCATTACATGCACT+TGG - tig0039788:9068-9087 Msa1458790:CDS 35.0%
AGATACGAACCCATCATTAT+TGG + tig0039788:9354-9373 Msa1458790:intergenic 35.0%
! CTTGTTGGTTAGCTCAAATT+TGG + tig0039788:9507-9526 Msa1458790:intergenic 35.0%
GTAAAATATTCAACGAGGGT+TGG - tig0039788:9581-9600 Msa1458790:CDS 35.0%
ATAACTAGCAGCATATCTAC+CGG + tig0039788:9753-9772 Msa1458790:intergenic 35.0%
ATGCTGCTAGTTATGTTAAG+GGG - tig0039788:9759-9778 Msa1458790:CDS 35.0%
!! TGTTGATAATTGGAATGGTG+TGG - tig0039788:9847-9866 Msa1458790:intron 35.0%
! GTACTATAGTACACTTTTCC+TGG + tig0039788:9989-10008 Msa1458790:intergenic 35.0%
!! ATAAACTTTTTGGTCAGGCA+GGG + tig0039788:10118-10137 Msa1458790:intergenic 35.0%
!! AATAAACTTTTTGGTCAGGC+AGG + tig0039788:10119-10138 Msa1458790:intergenic 35.0%
AGAAAAAAGATGCAGCAAAG+AGG + tig0039788:10241-10260 Msa1458790:intergenic 35.0%
!! ATGCGTTGATGATTATATCC+TGG - tig0039788:10436-10455 Msa1458790:CDS 35.0%
!! AAAAGTACTACTCCAAAAGC+AGG + tig0039788:10563-10582 Msa1458790:intergenic 35.0%
TCTACAAAGGATTTCTTCAG+AGG + tig0039788:10764-10783 Msa1458790:intergenic 35.0%
!!! ATCAACAACTTGGTTTTAGC+AGG - tig0039788:11074-11093 Msa1458790:intron 35.0%
!!! TCAACAACTTGGTTTTAGCA+GGG - tig0039788:11075-11094 Msa1458790:intron 35.0%
GTAAAGGAAAAGAACAAGAG+AGG + tig0039788:11220-11239 Msa1458790:intergenic 35.0%
AAAAAAGGTGACCCTACATA+TGG + tig0039788:11471-11490 Msa1458790:intergenic 35.0%
TTAAGAGTGGGGTTTAGTAT+GGG + tig0039788:11620-11639 Msa1458790:intergenic 35.0%
TTTAAGAGTGGGGTTTAGTA+TGG + tig0039788:11621-11640 Msa1458790:intergenic 35.0%
!! ACTTACATCAAGTTGGAGAT+TGG - tig0039788:11745-11764 Msa1458790:intron 35.0%
CTCATAGACTATAACATAGG+TGG + tig0039788:12181-12200 Msa1458790:intergenic 35.0%
! CACGAACTGTTTTCTTTAAG+AGG + tig0039788:12373-12392 Msa1458790:intergenic 35.0%
CTCTTAAAGAAAACAGTTCG+TGG - tig0039788:12371-12390 Msa1458790:intron 35.0%
TACAATTATCACATCCACGT+TGG - tig0039788:12427-12446 Msa1458790:intron 35.0%
! GTCATCTCTTTTGCTTTACT+TGG - tig0039788:12485-12504 Msa1458790:intron 35.0%
!! TGCTTTACTTGGGTTGATTT+AGG - tig0039788:12496-12515 Msa1458790:intron 35.0%
ATGTGATGACAAATTGGGAT+TGG - tig0039788:12683-12702 Msa1458790:intron 35.0%
GTTCGTTGGATCTATATTAG+AGG + tig0039788:12842-12861 Msa1458790:intergenic 35.0%
ATAAGGATATCAGTGTTCGT+TGG + tig0039788:12856-12875 Msa1458790:intergenic 35.0%
AGCAGATGTGAATAATGCTT+TGG - tig0039788:13047-13066 Msa1458790:CDS 35.0%
TGCTTTGGTGAATACATTGA+AGG - tig0039788:13062-13081 Msa1458790:CDS 35.0%
! TTGAAGGTGCAAATGAGATT+AGG - tig0039788:13078-13097 Msa1458790:CDS 35.0%
! TGAAGGTGCAAATGAGATTA+GGG - tig0039788:13079-13098 Msa1458790:CDS 35.0%
ATGAGATTAGGGATGTTTGA+TGG - tig0039788:13090-13109 Msa1458790:CDS 35.0%
CTGGTTTACACACATCTTTA+GGG + tig0039788:13149-13168 Msa1458790:intergenic 35.0%
ATCTTCCTATTCCTTGTAAG+GGG + tig0039788:13554-13573 Msa1458790:intergenic 35.0%
AGATGCAACTATTCTAGTGA+TGG - tig0039788:13665-13684 Msa1458790:intron 35.0%
GATGCAACTATTCTAGTGAT+GGG - tig0039788:13666-13685 Msa1458790:intron 35.0%
CAGTTTCAGCTTCTATAGAT+TGG + tig0039788:13698-13717 Msa1458790:intergenic 35.0%
TAGAAGCTGAAACTGTTGAT+AGG - tig0039788:13703-13722 Msa1458790:intron 35.0%
! ACAAGATCTTGTTTCAAAGG+TGG - tig0039788:13752-13771 Msa1458790:intron 35.0%
! ATCAAAGGGACCAACTATTT+TGG - tig0039788:13782-13801 Msa1458790:intron 35.0%
!!! ATTTTGGTTTTGATGTCTGG+TGG - tig0039788:13798-13817 Msa1458790:intron 35.0%
!!! TTTTGGTTTTGATGTCTGGT+GGG - tig0039788:13799-13818 Msa1458790:intron 35.0%
TTTGCAAAAGTAATGTCCAC+AGG + tig0039788:13825-13844 Msa1458790:intergenic 35.0%
!! GCAAGTTTTATGACAAACCT+GGG + tig0039788:13941-13960 Msa1458790:intergenic 35.0%
!! TGCAAGTTTTATGACAAACC+TGG + tig0039788:13942-13961 Msa1458790:intergenic 35.0%
!! CACTATTGTGTTTTGCTATC+AGG - tig0039788:14015-14034 Msa1458790:intron 35.0%
!! TATTGTGTTTTGCTATCAGG+AGG - tig0039788:14018-14037 Msa1458790:intron 35.0%
!!! TTGTCATGGCCAAGTTTTTT+AGG + tig0039788:14077-14096 Msa1458790:intergenic 35.0%
AAACTTGGCCATGACAAATA+TGG - tig0039788:14080-14099 Msa1458790:intron 35.0%
TCTCATTGCCATATTTGTCA+TGG + tig0039788:14091-14110 Msa1458790:intergenic 35.0%
! CATTTTTGACATCAACGTGA+AGG + tig0039788:14338-14357 Msa1458790:intergenic 35.0%
TCACGTTGATGTCAAAAATG+TGG - tig0039788:14338-14357 Msa1458790:intron 35.0%
CACGTTGATGTCAAAAATGT+GGG - tig0039788:14339-14358 Msa1458790:intron 35.0%
AAAAATGTGGGATCTAGAGA+TGG - tig0039788:14351-14370 Msa1458790:intron 35.0%
GAACTTTCTCAAAAGCAACT+AGG + tig0039788:14443-14462 Msa1458790:intergenic 35.0%
!! CATTGGTGATGTTAAGCATT+CGG - tig0039788:14578-14597 Msa1458790:intron 35.0%
TCTTGAAGAGAAGACATGTT+AGG - tig0039788:14695-14714 Msa1458790:intron 35.0%
!! TTTTGGGAGAGATGAGATTA+AGG - tig0039788:14765-14784 Msa1458790:intron 35.0%
TGTATTCTCCCATTTCTTTC+TGG - tig0039788:14803-14822 Msa1458790:intron 35.0%
TTAATACCGAAGGGACAGAA+AGG - tig0039788:7762-7781 Msa1458790:three_prime_UTR 40.0%
! TTTGGTGTGAAGAATGAGTG+GGG - tig0039788:7863-7882 Msa1458790:three_prime_UTR 40.0%
GTTCACCCGTTCACAAAATT+GGG - tig0039788:8174-8193 Msa1458790:CDS 40.0%
ATGGGAAAAGTGACCTCTAA+GGG + tig0039788:8215-8234 Msa1458790:intergenic 40.0%
TATGGGAAAAGTGACCTCTA+AGG + tig0039788:8216-8235 Msa1458790:intergenic 40.0%
! TACATTTTGCACGAGAGAGA+TGG - tig0039788:8531-8550 Msa1458790:CDS 40.0%
! CCGCCTAATTTTTGTGATCA+TGG - tig0039788:8581-8600 Msa1458790:CDS 40.0%
! CAAAGTATCCATCGTGAATG+TGG + tig0039788:8990-9009 Msa1458790:intergenic 40.0%
ATCCATTACATGCACTTGGA+TGG - tig0039788:9072-9091 Msa1458790:CDS 40.0%
TCTCACAAAGCAAGGGATAA+AGG + tig0039788:9098-9117 Msa1458790:intergenic 40.0%
TGCAAGTTGCTCAAGAAAGT+GGG + tig0039788:9462-9481 Msa1458790:intergenic 40.0%
! TGAACATTTTCAGAGACCCT+AGG - tig0039788:9684-9703 Msa1458790:CDS 40.0%
TAGTTATGTTAAGGGGCTAC+AGG - tig0039788:9766-9785 Msa1458790:CDS 40.0%
AGTTATGTTAAGGGGCTACA+GGG - tig0039788:9767-9786 Msa1458790:CDS 40.0%
! AACAGACGGTAACAAGTTGA+AGG - tig0039788:9790-9809 Msa1458790:CDS 40.0%
TCGCTTTCACTTTAATGCAC+TGG - tig0039788:9871-9890 Msa1458790:intron 40.0%
! AGTACACTTTTCCTGGGAAA+GGG + tig0039788:9982-10001 Msa1458790:intergenic 40.0%
! TAGTACACTTTTCCTGGGAA+AGG + tig0039788:9983-10002 Msa1458790:intergenic 40.0%
AATAGATAGAGTGGCCAAGT+TGG - tig0039788:10197-10216 Msa1458790:CDS 40.0%
ACAGATCCTACAAACCAACT+TGG + tig0039788:10214-10233 Msa1458790:intergenic 40.0%
!! AAGTTGGTTTGTAGGATCTG+TGG - tig0039788:10213-10232 Msa1458790:CDS 40.0%
!! AGTTGGTTTGTAGGATCTGT+GGG - tig0039788:10214-10233 Msa1458790:CDS 40.0%
ATAACTATGACTCAGCTGAG+TGG - tig0039788:10285-10304 Msa1458790:intron 40.0%
!! TCTTTCCTGCTTTTGCTTAG+AGG - tig0039788:10333-10352 Msa1458790:intron 40.0%
TTGTACCTCTAAGCAAAAGC+AGG + tig0039788:10341-10360 Msa1458790:intergenic 40.0%
AAAATAGGTGGCATTTAGCC+TGG - tig0039788:10597-10616 Msa1458790:intron 40.0%
AAATAGGTGGCATTTAGCCT+GGG - tig0039788:10598-10617 Msa1458790:intron 40.0%
! GGAAAGAAGTTTTCTTTCCC+AGG + tig0039788:10618-10637 Msa1458790:intergenic 40.0%
AGAAAACTTCTTTCCCCCAT+AGG - tig0039788:10623-10642 Msa1458790:intron 40.0%
GGATTTCTTCAGAGGAAAGA+GGG + tig0039788:10756-10775 Msa1458790:intergenic 40.0%
AGGATTTCTTCAGAGGAAAG+AGG + tig0039788:10757-10776 Msa1458790:intergenic 40.0%
! AAGAAATCAGCAAAAGCACG+AGG + tig0039788:10932-10951 Msa1458790:intergenic 40.0%
CATAATTTCACCTACCATGG+AGG - tig0039788:11050-11069 Msa1458790:intron 40.0%
ATGTGAAAAGTCAGTGAGAG+AGG - tig0039788:11173-11192 Msa1458790:intron 40.0%
TTGGAGGTTTCATGTGACAA+TGG - tig0039788:11276-11295 Msa1458790:intron 40.0%
CATTACCAGGTAACAGATCT+GGG - tig0039788:11522-11541 Msa1458790:intron 40.0%
GGAAACTTCTTTCCCATGAT+GGG + tig0039788:11594-11613 Msa1458790:intergenic 40.0%
AGGAAACTTCTTTCCCATGA+TGG + tig0039788:11595-11614 Msa1458790:intergenic 40.0%
!! ACATCAAGTTGGAGATTGGT+TGG - tig0039788:11749-11768 Msa1458790:intron 40.0%
GTTTAAACTCCCACATGTGT+GGG + tig0039788:11810-11829 Msa1458790:intergenic 40.0%
! ACCATTTAGGATGTGTGTGA+AGG - tig0039788:12277-12296 Msa1458790:intron 40.0%
TCCTTCACACACATCCTAAA+TGG + tig0039788:12281-12300 Msa1458790:intergenic 40.0%
! TTTAGGATGTGTGTGAAGGA+AGG - tig0039788:12281-12300 Msa1458790:intron 40.0%
AGAAAACAGTTCGTGGAGTA+TGG - tig0039788:12378-12397 Msa1458790:intron 40.0%
GAAAACAGTTCGTGGAGTAT+GGG - tig0039788:12379-12398 Msa1458790:intron 40.0%
AAAACAGTTCGTGGAGTATG+GGG - tig0039788:12380-12399 Msa1458790:intron 40.0%
GTATCTGATTGTGACTCTGT+CGG - tig0039788:12525-12544 Msa1458790:intron 40.0%
TATCTGATTGTGACTCTGTC+GGG - tig0039788:12526-12545 Msa1458790:intron 40.0%
TGATGTTGCAGGTTTGGATT+TGG - tig0039788:12963-12982 Msa1458790:CDS 40.0%
CAGGTTTGGATTTGGATTGT+GGG - tig0039788:12971-12990 Msa1458790:CDS 40.0%
ACACAGGATGCAGTGAAAAA+AGG - tig0039788:13012-13031 Msa1458790:CDS 40.0%
GCTCAAGCTTATGGAAGATT+AGG - tig0039788:13123-13142 Msa1458790:CDS 40.0%
! GCTGGTTTACACACATCTTT+AGG + tig0039788:13150-13169 Msa1458790:intergenic 40.0%
AATCATGGTAACCGTGACAT+CGG + tig0039788:13292-13311 Msa1458790:intergenic 40.0%
ACCATGATTGGAAACTATGC+TGG - tig0039788:13303-13322 Msa1458790:intron 40.0%
ACCAGCATAGTTTCCAATCA+TGG + tig0039788:13307-13326 Msa1458790:intergenic 40.0%
AATTGGGCCTGGAAGAATTT+GGG + tig0039788:13333-13352 Msa1458790:intergenic 40.0%
TAATTGGGCCTGGAAGAATT+TGG + tig0039788:13334-13353 Msa1458790:intergenic 40.0%
TGCTAAGACTATTCATCAGC+TGG - tig0039788:13575-13594 Msa1458790:intron 40.0%
GCTAAGACTATTCATCAGCT+GGG - tig0039788:13576-13595 Msa1458790:intron 40.0%
!! AACTATTCTAGTGATGGGCT+TGG - tig0039788:13671-13690 Msa1458790:intron 40.0%
ACAAGATCTTGTTGATGTCC+AGG + tig0039788:13744-13763 Msa1458790:intergenic 40.0%
ACAATATGCCAGCAACTTTG+GGG + tig0039788:13854-13873 Msa1458790:intergenic 40.0%
CACAATATGCCAGCAACTTT+GGG + tig0039788:13855-13874 Msa1458790:intergenic 40.0%
CAAAGTTGCTGGCATATTGT+GGG - tig0039788:13854-13873 Msa1458790:intron 40.0%
! TTATTTGGAACTGCTAACCC+AGG - tig0039788:13921-13940 Msa1458790:intron 40.0%
CAATGAGACCAAGCAAAGTA+GGG - tig0039788:14103-14122 Msa1458790:intron 40.0%
ACCTAATGGAGGTAACCATT+GGG - tig0039788:14404-14423 Msa1458790:intron 40.0%
! AAAGCAACTAGGCTTTTCTG+CGG + tig0039788:14432-14451 Msa1458790:intergenic 40.0%
TCTAACCCTTTGCTTAGTCT+TGG + tig0039788:14475-14494 Msa1458790:intergenic 40.0%
TGGGATTAGGAGAATTCCAA+TGG - tig0039788:14539-14558 Msa1458790:intron 40.0%
GGGATTAGGAGAATTCCAAT+GGG - tig0039788:14540-14559 Msa1458790:intron 40.0%
TGAAGACTATGTTCTCCCAT+TGG + tig0039788:14558-14577 Msa1458790:intergenic 40.0%
GGAGAACATAGTCTTCACAT+TGG - tig0039788:14561-14580 Msa1458790:intron 40.0%
TCTACTCCTTTCTGTCCCTT+CGG + tig0039788:7771-7790 Msa1458790:intergenic 45.0%
GCGTAAAACGCGTTTCCTTA+AGG + tig0039788:7939-7958 Msa1458790:intergenic 45.0%
TGGAAATATCCGGAAGCTTC+TGG - tig0039788:8011-8030 Msa1458790:three_prime_UTR 45.0%
TATCCGGAAGCTTCTGGATA+CGG - tig0039788:8017-8036 Msa1458790:three_prime_UTR 45.0%
TTCTGGATACGGGTTTGGAT+CGG - tig0039788:8028-8047 Msa1458790:three_prime_UTR 45.0%
CGTTCACCCGTTCACAAAAT+TGG - tig0039788:8173-8192 Msa1458790:CDS 45.0%
! GGGTACCCAATTTTGTGAAC+GGG + tig0039788:8182-8201 Msa1458790:intergenic 45.0%
!! GGGGTACCCAATTTTGTGAA+CGG + tig0039788:8183-8202 Msa1458790:intergenic 45.0%
TCACAAAATTGGGTACCCCA+AGG - tig0039788:8184-8203 Msa1458790:CDS 45.0%
CACAAAATTGGGTACCCCAA+GGG - tig0039788:8185-8204 Msa1458790:CDS 45.0%
AATAATCAGGGCGTGTGAAC+TGG - tig0039788:8477-8496 Msa1458790:CDS 45.0%
ATAATCAGGGCGTGTGAACT+GGG - tig0039788:8478-8497 Msa1458790:CDS 45.0%
CACACTTGTGCTCACACTTA+TGG - tig0039788:8501-8520 Msa1458790:CDS 45.0%
TTGTGATCATGGGATTGGGT+TGG - tig0039788:8592-8611 Msa1458790:CDS 45.0%
TGTGATCATGGGATTGGGTT+GGG - tig0039788:8593-8612 Msa1458790:CDS 45.0%
AAGAAAGTGGGGCAGTGAAA+GGG + tig0039788:9450-9469 Msa1458790:intergenic 45.0%
GCAAGTTGCTCAAGAAAGTG+GGG + tig0039788:9461-9480 Msa1458790:intergenic 45.0%
GTGCAAGTTGCTCAAGAAAG+TGG + tig0039788:9463-9482 Msa1458790:intergenic 45.0%
! TGGTAATGTGCAGGTTGTCT+CGG - tig0039788:9601-9620 Msa1458790:CDS 45.0%
GAAGCAAGGGCAATGTACAA+TGG - tig0039788:9626-9645 Msa1458790:CDS 45.0%
GAGCAGCAGGGTTAACTTAT+TGG - tig0039788:9651-9670 Msa1458790:CDS 45.0%
! ACATTTTCAGAGACCCTAGG+TGG - tig0039788:9687-9706 Msa1458790:CDS 45.0%
! CATTTTCAGAGACCCTAGGT+GGG - tig0039788:9688-9707 Msa1458790:CDS 45.0%
! ATTTTCAGAGACCCTAGGTG+GGG - tig0039788:9689-9708 Msa1458790:CDS 45.0%
! AGACGGTAACAAGTTGAAGG+TGG - tig0039788:9793-9812 Msa1458790:CDS 45.0%
TATAGTACCATCCCTTTCCC+AGG - tig0039788:9968-9987 Msa1458790:intron 45.0%
ACTACTCCAAAAGCAGGTGT+CGG + tig0039788:10557-10576 Msa1458790:intergenic 45.0%
TTTCTTCAGAGGAAAGAGGG+AGG + tig0039788:10753-10772 Msa1458790:intergenic 45.0%
!! GTTGTTGATTCCTCCATGGT+AGG + tig0039788:11063-11082 Msa1458790:intergenic 45.0%
!! CCAAGTTGTTGATTCCTCCA+TGG + tig0039788:11067-11086 Msa1458790:intergenic 45.0%
CCATGGAGGAATCAACAACT+TGG - tig0039788:11064-11083 Msa1458790:intron 45.0%
CCAGATCTGTTACCTGGTAA+TGG + tig0039788:11524-11543 Msa1458790:intergenic 45.0%
CCATTACCAGGTAACAGATC+TGG - tig0039788:11521-11540 Msa1458790:intron 45.0%
AGTGGGGTTTAGTATGGGAA+AGG + tig0039788:11615-11634 Msa1458790:intergenic 45.0%
TCAAATGTGTCCCACACATG+TGG - tig0039788:11797-11816 Msa1458790:intron 45.0%
CAAATGTGTCCCACACATGT+GGG - tig0039788:11798-11817 Msa1458790:intron 45.0%
CGTTTAAACTCCCACATGTG+TGG + tig0039788:11811-11830 Msa1458790:intergenic 45.0%
GCGGGGTGACAATTCAATTA+TGG - tig0039788:12026-12045 Msa1458790:intron 45.0%
GGTTTGGATCAGCACATGTA+GGG + tig0039788:12352-12371 Msa1458790:intergenic 45.0%
AGGTTTGGATCAGCACATGT+AGG + tig0039788:12353-12372 Msa1458790:intergenic 45.0%
GATAAGGCAATTGTCCAACG+TGG + tig0039788:12444-12463 Msa1458790:intergenic 45.0%
ATCTGATTGTGACTCTGTCG+GGG - tig0039788:12527-12546 Msa1458790:intron 45.0%
! ATGGAACTAGCCTGCTTTGA+TGG + tig0039788:12607-12626 Msa1458790:intergenic 45.0%
GGTCACACATTCGCACAATA+AGG + tig0039788:12873-12892 Msa1458790:intergenic 45.0%
GCAGGTTTGGATTTGGATTG+TGG - tig0039788:12970-12989 Msa1458790:CDS 45.0%
CTTCCATAAGCTTGAGCTGA+TGG + tig0039788:13120-13139 Msa1458790:intergenic 45.0%
TCCTTGTCTAGCAGCTTCAA+GGG + tig0039788:13187-13206 Msa1458790:intergenic 45.0%
TTCCTTGTCTAGCAGCTTCA+AGG + tig0039788:13188-13207 Msa1458790:intergenic 45.0%
GTAACCGTGACATCGGAATT+GGG + tig0039788:13285-13304 Msa1458790:intergenic 45.0%
GATGTCACGGTTACCATGAT+TGG - tig0039788:13291-13310 Msa1458790:intron 45.0%
TGGTAAGCCCAAATTCTTCC+AGG - tig0039788:13323-13342 Msa1458790:intron 45.0%
CTTAGGCTTATAATTGGGCC+TGG + tig0039788:13344-13363 Msa1458790:intergenic 45.0%
! GCTGAAACTGTTGATAGGAC+TGG - tig0039788:13708-13727 Msa1458790:intron 45.0%
AAGAATGACCCCAAAGTTGC+TGG - tig0039788:13843-13862 Msa1458790:intron 45.0%
CCACAATATGCCAGCAACTT+TGG + tig0039788:13856-13875 Msa1458790:intergenic 45.0%
CCAAAGTTGCTGGCATATTG+TGG - tig0039788:13853-13872 Msa1458790:intron 45.0%
GCAATGAGACCAAGCAAAGT+AGG - tig0039788:14102-14121 Msa1458790:intron 45.0%
TGTCCAAATGGATACACGAC+TGG + tig0039788:14162-14181 Msa1458790:intergenic 45.0%
GTCGTGTATCCATTTGGACA+TGG - tig0039788:14162-14181 Msa1458790:intron 45.0%
ATTATCTAGTGCACCCACAG+TGG - tig0039788:14212-14231 Msa1458790:intron 45.0%
AGAGTGACACATGCAAGATG+TGG - tig0039788:14297-14316 Msa1458790:intron 45.0%
CAATGGTTACCTCCATTAGG+TGG + tig0039788:14405-14424 Msa1458790:intergenic 45.0%
CACCTAATGGAGGTAACCAT+TGG - tig0039788:14403-14422 Msa1458790:intron 45.0%
ACCCAATGGTTACCTCCATT+AGG + tig0039788:14408-14427 Msa1458790:intergenic 45.0%
TTCCTGCCAAGACTAAGCAA+AGG - tig0039788:14466-14485 Msa1458790:intron 45.0%
TCCTGCCAAGACTAAGCAAA+GGG - tig0039788:14467-14486 Msa1458790:intron 45.0%
!! TCACTTCAAGCAGAAGCACT+TGG - tig0039788:14603-14622 Msa1458790:intron 45.0%
!! CACTTCAAGCAGAAGCACTT+GGG - tig0039788:14604-14623 Msa1458790:intron 45.0%
!! TATAATTATAATTAAATGAA+TGG + tig0039788:8557-8576 Msa1458790:intergenic 5.0%
!!! ATTTAATTAATTTGTATTTT+GGG - tig0039788:11308-11327 Msa1458790:intron 5.0%
!! TTAAAAAAATATTAAATCAA+TGG - tig0039788:11553-11572 Msa1458790:intron 5.0%
GAGAAGAGAGAAAACCGCAC+AGG - tig0039788:7822-7841 Msa1458790:three_prime_UTR 50.0%
! CACAGTTGATGCTTCCTGTG+CGG + tig0039788:7839-7858 Msa1458790:intergenic 50.0%
! AACGCGTTTTACGCGTGACT+TGG - tig0039788:7945-7964 Msa1458790:three_prime_UTR 50.0%
! ACGCGTTTTACGCGTGACTT+GGG - tig0039788:7946-7965 Msa1458790:three_prime_UTR 50.0%
ATCCGGAAGCTTCTGGATAC+GGG - tig0039788:8018-8037 Msa1458790:three_prime_UTR 50.0%
AACCCGTATCCAGAAGCTTC+CGG + tig0039788:8023-8042 Msa1458790:intergenic 50.0%
GAAGCTTCTGGATACGGGTT+TGG - tig0039788:8023-8042 Msa1458790:three_prime_UTR 50.0%
TCTGGATACGGGTTTGGATC+GGG - tig0039788:8029-8048 Msa1458790:three_prime_UTR 50.0%
TTGGGGTGACCGTTCAATGT+GGG - tig0039788:8252-8271 Msa1458790:CDS 50.0%
GGCCATCCAAGTGCATGTAA+TGG + tig0039788:9077-9096 Msa1458790:intergenic 50.0%
CAAGAAAGTGGGGCAGTGAA+AGG + tig0039788:9451-9470 Msa1458790:intergenic 50.0%
!! AACGAGGGTTGGTAATGTGC+AGG - tig0039788:9592-9611 Msa1458790:CDS 50.0%
GCAAGGGCAATGTACAATGG+AGG - tig0039788:9629-9648 Msa1458790:CDS 50.0%
ATGTACAATGGAGGAGCAGC+AGG - tig0039788:9638-9657 Msa1458790:CDS 50.0%
TGTACAATGGAGGAGCAGCA+GGG - tig0039788:9639-9658 Msa1458790:CDS 50.0%
! CATATCTACCGGCTAGCACA+GGG + tig0039788:9742-9761 Msa1458790:intergenic 50.0%
! CACTTTTCCTGGGAAAGGGA+TGG + tig0039788:9978-9997 Msa1458790:intergenic 50.0%
!! GAGTGGCCAAGTTGGTTTGT+AGG - tig0039788:10205-10224 Msa1458790:CDS 50.0%
TGGCAGCTGTCAATTGCAAC+AGG - tig0039788:10662-10681 Msa1458790:intron 50.0%
! AGCGGACCACACGATTTTTG+CGG - tig0039788:12007-12026 Msa1458790:intron 50.0%
GTGGAGTATGGGGTCTTGAT+GGG - tig0039788:12390-12409 Msa1458790:intron 50.0%
!! CTGGCGTTGATGCATAATGC+TGG + tig0039788:12566-12585 Msa1458790:intergenic 50.0%
TTGGATTGTGGGCCTTTCCT+AGG - tig0039788:12982-13001 Msa1458790:CDS 50.0%
TGTGTGTGCACTCCTAGGAA+AGG + tig0039788:12997-13016 Msa1458790:intergenic 50.0%
! TTTCCTAGGAGTGCACACAC+AGG - tig0039788:12996-13015 Msa1458790:CDS 50.0%
GAGCCATCAGCTCAAGCTTA+TGG - tig0039788:13114-13133 Msa1458790:CDS 50.0%
ACCGAACTGTGGCTGTCATT+GGG - tig0039788:13259-13278 Msa1458790:intron 50.0%
GGTAACCGTGACATCGGAAT+TGG + tig0039788:13286-13305 Msa1458790:intergenic 50.0%
GGATATACCAGCCCCTTACA+AGG - tig0039788:13540-13559 Msa1458790:intron 50.0%
ACCAGCCCCTTACAAGGAAT+AGG - tig0039788:13546-13565 Msa1458790:intron 50.0%
TCCTATTCCTTGTAAGGGGC+TGG + tig0039788:13550-13569 Msa1458790:intergenic 50.0%
TAAACAATTTGGGCCTGCCC+TGG - tig0039788:13626-13645 Msa1458790:intron 50.0%
AAAGGTGGCAGCTGCATCAA+AGG - tig0039788:13767-13786 Msa1458790:intron 50.0%
AAGGTGGCAGCTGCATCAAA+GGG - tig0039788:13768-13787 Msa1458790:intron 50.0%
AGTTGCTGGCATATTGTGGG+CGG - tig0039788:13857-13876 Msa1458790:intron 50.0%
!! CATATTGTGGGCGGGTTATC+CGG - tig0039788:13866-13885 Msa1458790:intron 50.0%
!! ATATTGTGGGCGGGTTATCC+GGG - tig0039788:13867-13886 Msa1458790:intron 50.0%
TCTTGTGGGTACCATGTCAC+TGG + tig0039788:14051-14070 Msa1458790:intergenic 50.0%
GGACCAGTCGTGTATCCATT+TGG - tig0039788:14156-14175 Msa1458790:intron 50.0%
GACATCAACGTGAAGGGCAA+TGG + tig0039788:14331-14350 Msa1458790:intergenic 50.0%
GTGTTCTCTGCTCCACCTAA+TGG - tig0039788:14390-14409 Msa1458790:intron 50.0%
TTCTCTGCTCCACCTAATGG+AGG - tig0039788:14393-14412 Msa1458790:intron 50.0%
!! ACCCTTTGCTTAGTCTTGGC+AGG + tig0039788:14471-14490 Msa1458790:intergenic 50.0%
! GGGGCGAGCTCTCCTTTTAT+AGG - tig0039788:7882-7901 Msa1458790:three_prime_UTR 55.0%
! CGCGTTTTACGCGTGACTTG+GGG - tig0039788:7947-7966 Msa1458790:three_prime_UTR 55.0%
GATACGGGTTTGGATCGGGT+CGG - tig0039788:8033-8052 Msa1458790:three_prime_UTR 55.0%
! ACCTCTAAGGGTGTGCCCTT+GGG + tig0039788:8203-8222 Msa1458790:intergenic 55.0%
GTTGGGGTGACCGTTCAATG+TGG - tig0039788:8251-8270 Msa1458790:CDS 55.0%
AGGTTGTCTCGGACGAAGCA+AGG - tig0039788:9612-9631 Msa1458790:CDS 55.0%
GGTTGTCTCGGACGAAGCAA+GGG - tig0039788:9613-9632 Msa1458790:CDS 55.0%
! GCATATCTACCGGCTAGCAC+AGG + tig0039788:9743-9762 Msa1458790:intergenic 55.0%
AAGGGGCTACAGGGAACAGA+CGG - tig0039788:9776-9795 Msa1458790:CDS 55.0%
GATGGCCCAGATCTGTTACC+TGG + tig0039788:11530-11549 Msa1458790:intergenic 55.0%
! GCGGACCACACGATTTTTGC+GGG - tig0039788:12008-12027 Msa1458790:intron 55.0%
! CGGACCACACGATTTTTGCG+GGG - tig0039788:12009-12028 Msa1458790:intron 55.0%
GTCACCCCGCAAAAATCGTG+TGG + tig0039788:12016-12035 Msa1458790:intergenic 55.0%
CGTGGAGTATGGGGTCTTGA+TGG - tig0039788:12389-12408 Msa1458790:intron 55.0%
GCATCAGCAGCAGCTTCTTC+TGG + tig0039788:12585-12604 Msa1458790:intergenic 55.0%
GCTGCTGATGCCATCAAAGC+AGG - tig0039788:12594-12613 Msa1458790:intron 55.0%
CATCCTGTGTGTGCACTCCT+AGG + tig0039788:13002-13021 Msa1458790:intergenic 55.0%
!! AGGGCTAGCTCTTGATGAGC+TGG + tig0039788:13168-13187 Msa1458790:intergenic 55.0%
GCCCTTGAAGCTGCTAGACA+AGG - tig0039788:13183-13202 Msa1458790:intron 55.0%
TGTGGGGAGAGAGGCAAAGT+AGG + tig0039788:13234-13253 Msa1458790:intergenic 55.0%
CAATGACAGCCACAGTTCGG+TGG + tig0039788:13260-13279 Msa1458790:intergenic 55.0%
CACCGAACTGTGGCTGTCAT+TGG - tig0039788:13258-13277 Msa1458790:intron 55.0%
GCCCAATGACAGCCACAGTT+CGG + tig0039788:13263-13282 Msa1458790:intergenic 55.0%
TGGGCCCAATTCCGATGTCA+CGG - tig0039788:13278-13297 Msa1458790:intron 55.0%
AACGACGTGAGTGATGCGAG+TGG + tig0039788:13432-13451 Msa1458790:intergenic 55.0%
TGCATGACGAGCTGCATCCA+GGG + tig0039788:13646-13665 Msa1458790:intergenic 55.0%
!!! AGGACTGGCTTGCTTTTGCC+TGG - tig0039788:13723-13742 Msa1458790:intron 55.0%
! TTTGATGTCTGGTGGGCCTG+TGG - tig0039788:13806-13825 Msa1458790:intron 55.0%
GTTGCTGGCATATTGTGGGC+GGG - tig0039788:13858-13877 Msa1458790:intron 55.0%
CAATTGCAGCACCACCAGCT+TGG + tig0039788:13893-13912 Msa1458790:intergenic 55.0%
GAGGCAAGCTACCAGTGACA+TGG - tig0039788:14037-14056 Msa1458790:intron 55.0%
CCTGGGTACCCTACTTTGCT+TGG + tig0039788:14114-14133 Msa1458790:intergenic 55.0%
! CCAAGCAAAGTAGGGTACCC+AGG - tig0039788:14111-14130 Msa1458790:intron 55.0%
! ACCCACAGTGGTGTCAGTTC+CGG - tig0039788:14224-14243 Msa1458790:intron 55.0%
ACCGGAACTGACACCACTGT+GGG + tig0039788:14228-14247 Msa1458790:intergenic 55.0%
CCATGTCGATGACCATGCAC+CGG + tig0039788:14246-14265 Msa1458790:intergenic 55.0%
! GGCTTTTCTGCGGTACCCAA+TGG + tig0039788:14422-14441 Msa1458790:intergenic 55.0%
! CCTCTAAGGGTGTGCCCTTG+GGG + tig0039788:8202-8221 Msa1458790:intergenic 60.0%
! GACCTCTAAGGGTGTGCCCT+TGG + tig0039788:8204-8223 Msa1458790:intergenic 60.0%
GGTCGTGGACAGGAAACTCC+CGG - tig0039788:9710-9729 Msa1458790:CDS 60.0%
GCTAGCACAGGGTCTTCACC+GGG + tig0039788:9731-9750 Msa1458790:intergenic 60.0%
GGCTAGCACAGGGTCTTCAC+CGG + tig0039788:9732-9751 Msa1458790:intergenic 60.0%
GGTGAAGACCCTGTGCTAGC+CGG - tig0039788:9731-9750 Msa1458790:CDS 60.0%
CAGCTGAGTGGACCGTCATG+AGG - tig0039788:10297-10316 Msa1458790:intron 60.0%
! CTGGCTCCGACACCTGCTTT+TGG - tig0039788:10548-10567 Msa1458790:intron 60.0%
! CACAGTTCGGTGGCGTTGTG+GGG + tig0039788:13250-13269 Msa1458790:intergenic 60.0%
! CCACAGTTCGGTGGCGTTGT+GGG + tig0039788:13251-13270 Msa1458790:intergenic 60.0%
CTGCATGACGAGCTGCATCC+AGG + tig0039788:13647-13666 Msa1458790:intergenic 60.0%
CACCGGAACTGACACCACTG+TGG + tig0039788:14229-14248 Msa1458790:intergenic 60.0%
! GTGGTGTCAGTTCCGGTGCA+TGG - tig0039788:14231-14250 Msa1458790:intron 60.0%
CCGGTGCATGGTCATCGACA+TGG - tig0039788:14243-14262 Msa1458790:intron 60.0%
! CCCCAAGGGCACACCCTTAG+AGG - tig0039788:8199-8218 Msa1458790:CDS 65.0%
AGAGACCCTAGGTGGGGTCG+TGG - tig0039788:9695-9714 Msa1458790:CDS 65.0%
CCTGTCCACGACCCCACCTA+GGG + tig0039788:9703-9722 Msa1458790:intergenic 65.0%
TCCTGTCCACGACCCCACCT+AGG + tig0039788:9704-9723 Msa1458790:intergenic 65.0%
CCCACAACGCCACCGAACTG+TGG - tig0039788:13248-13267 Msa1458790:intron 65.0%
! GCCACAGTTCGGTGGCGTTG+TGG + tig0039788:13252-13271 Msa1458790:intergenic 65.0%
TGACGAGCTGCATCCAGGGC+AGG + tig0039788:13642-13661 Msa1458790:intergenic 65.0%
GGTTATCCGGGCCAAGCTGG+TGG - tig0039788:13879-13898 Msa1458790:intron 65.0%
CCCTAGGTGGGGTCGTGGAC+AGG - tig0039788:9700-9719 Msa1458790:CDS 70.0%
CGGTGGCGTTGTGGGGAGAG+AGG + tig0039788:13243-13262 Msa1458790:intergenic 70.0%
! GCGGGTTATCCGGGCCAAGC+TGG - tig0039788:13876-13895 Msa1458790:intron 70.0%
GCAGCACCACCAGCTTGGCC+CGG + tig0039788:13888-13907 Msa1458790:intergenic 70.0%
Chromosome Type Strat End Strand Name
tig0039788 gene 7744 15045 7744 ID=Msa1458790;Name=Msa1458790
tig0039788 mRNA 7744 15045 7744 ID=Msa1458790-mRNA-1;Parent=Msa1458790;Name=Msa1458790-mRNA-1;_AED=0.05;_eAED=0.05;_QI=0|0.83|0.71|0.85|1|1|7|404|679
tig0039788 exon 7744 8752 7744 ID=Msa1458790-mRNA-1:exon:21930;Parent=Msa1458790-mRNA-1
tig0039788 exon 8847 9260 8847 ID=Msa1458790-mRNA-1:exon:21929;Parent=Msa1458790-mRNA-1
tig0039788 exon 9465 9815 9465 ID=Msa1458790-mRNA-1:exon:21928;Parent=Msa1458790-mRNA-1
tig0039788 exon 10174 10271 10174 ID=Msa1458790-mRNA-1:exon:21927;Parent=Msa1458790-mRNA-1
tig0039788 exon 10378 10547 10378 ID=Msa1458790-mRNA-1:exon:21926;Parent=Msa1458790-mRNA-1
tig0039788 exon 12897 13175 12897 ID=Msa1458790-mRNA-1:exon:21925;Parent=Msa1458790-mRNA-1
tig0039788 exon 14923 15045 14923 ID=Msa1458790-mRNA-1:exon:21924;Parent=Msa1458790-mRNA-1
tig0039788 CDS 14923 15045 14923 ID=Msa1458790-mRNA-1:cds;Parent=Msa1458790-mRNA-1
tig0039788 CDS 12897 13175 12897 ID=Msa1458790-mRNA-1:cds;Parent=Msa1458790-mRNA-1
tig0039788 CDS 10378 10547 10378 ID=Msa1458790-mRNA-1:cds;Parent=Msa1458790-mRNA-1
tig0039788 CDS 10174 10271 10174 ID=Msa1458790-mRNA-1:cds;Parent=Msa1458790-mRNA-1
tig0039788 CDS 9465 9815 9465 ID=Msa1458790-mRNA-1:cds;Parent=Msa1458790-mRNA-1
tig0039788 CDS 8847 9260 8847 ID=Msa1458790-mRNA-1:cds;Parent=Msa1458790-mRNA-1
tig0039788 CDS 8148 8752 8148 ID=Msa1458790-mRNA-1:cds;Parent=Msa1458790-mRNA-1
tig0039788 three_prime_UTR 7744 8147 7744 ID=Msa1458790-mRNA-1:three_prime_utr;Parent=Msa1458790-mRNA-1
Gene Sequence

>Msa1458790

ATGGTCTTAAGAACACTCTTAATACCGAAGGGACAGAAAGGAGTAGAAGAAGAAGAACGATTTGTTAAAATCGAAAGGGAGAAGAGAGAAAACCGCACAGGAAGCATCAACTGTGAGATTTTGGTTGTCTCGGACGAAGCAAGGGCAATGTACAATGGAGGAGCAGCAGGGTTAACTTATTGGAGTCCAAATGTGAACATTTTCAGAGACCCTAGGTGGGGTCGTGGACAGGAAACTCCCGGTGAAGACCCTGTGCTAGCCGGTAGATATGCTGCTAGTTATGTTAAGGGGCTACAGGGAACAGACGGTAACAAGTTGAAGGTGGCTGCTTGTTGCAAACATTTCACAGCTTATGATGTTGATAATTGGAATGGTGTGGATCGCTTTCACTTTAATGCACTGGTGAGTAAGCAAGACATAGAAGACACATTTGATGTACCATTTAGGATGTGTGTGAAGGAAGGAAAAGTAGCTAGTGTCATGTGTTCTTACAATCAAGTGAATGGGGTCCCTACATGTGCTGATCCAAACCTCTTAAAGAAAACAGTTCGTGGAGTATGGGGTCTTGATGGGTACATTGTATCTGATTGTGACTCTGTCGGGGTGCTTTACAATAGCCAGCATTATGCATCAACGCCAGAAGAAGCTGCTGCTGATGCCATCAAAGCAGGTTTGGATTTGGATTGTGGGCCTTTCCTAGGAGTGCACACACAGGATGCAGTGAAAAAAGGTTTGTTAACTGAAGCAGATGTGAATAATGCTTTGGTGAATACATTGAAGGTGCAAATGAGATTAGGGATGTTTGATGGAGAGCCATCAGCTCAAGCTTATGGAAGATTAGGCCCTAAAGATGTGTGTAAACCAGCTCATCAAGAGCTAGCCCTTGAAGCTGCTAGACAAGGAATTGTGCTTCTCAAAAACAATGGTCCTACTTTGCCTCTCTCCCCACAACGCCACCGAACTGTGGCTGTCATTGGGCCCAATTCCGATGTCACGGTTACCATGATTGGAAACTATGCTGGTATTGCATGTGGATATACCAGCCCCTTACAAGGAATAGGAAGATATGCTAAGACTATTCATCAGCTGGGTTGTTCAAATGTAGCTTGTAGAGATGATAAACAATTTGGGCCTGCCCTGGATGCAGCTCGTCATGCAGATGCAACTATTCTAGTGATGGGCTTGGACCAATCTATAGAAGCTGAAACTGTTGATAGGACTGGCTTGCTTTTGCCTGGACATCAACAAGATCTTGTTTCAAAGGTGGCAGCTGCATCAAAGGGACCAACTATTTTGGTTTTGATGTCTGGTGGGCCTGTGGACATTACTTTTGCAAAGAATGACCCCAAAGTTGCTGGCATATTGTGGGCGGGTTATCCGGGCCAAGCTGGTGGTGCTGCAATTGCTGACATTTTATTTGGAACTGCTAACCCAGGAGGCAAGCTACCAGTGACATGGTACCCACAAGAGTACCTAAAAAACTTGGCCATGACAAATATGGCAATGAGACCAAGCAAAGTAGGGTACCCAGGAAGAACATATAGATTCTACAAGGGACCAGTCGTGTATCCATTTGGACATGGATTAACATACACACATTTTGTTCACGAATTATCTAGTGCACCCACAGTGGTGTCAGTTCCGGTGCATGGTCATCGACATGGCAACAACACAAACATTTCAAACAAAGCAATTAGAGTGACACATGCAAGATGTGGCAAACTCTCCATTGCCCTTCACGTTGATGTCAAAAATGTGGGATCTAGAGATGGTACTCACACGCTGTTAGTGTTCTCTGCTCCACCTAATGGAGGTAACCATTGGGTACCGCAGAAAAGCCTAGTTGCTTTTGAGAAAGTTCATGTTCCTGCCAAGACTAAGCAAAGGGTTAGAGTTAATATTCATGTTTGTAAGTTGCTTAGTGTAGTTGATAAATCTGGGATTAGGAGAATTCCAATGGGAGAACATAGTCTTCACATTGGTGATGTTAAGCATTCGGTTTCACTTCAAGCAGAAGCACTTGGGATTATCAAGTCTTGA
Protein sequence

>Msa1458790

MVLRTLLIPKGQKGVEEEERFVKIEREKRENRTGSINCEILVVSDEARAMYNGGAAGLTYWSPNVNIFRDPRWGRGQETPGEDPVLAGRYAASYVKGLQGTDGNKLKVAACCKHFTAYDVDNWNGVDRFHFNALVSKQDIEDTFDVPFRMCVKEGKVASVMCSYNQVNGVPTCADPNLLKKTVRGVWGLDGYIVSDCDSVGVLYNSQHYASTPEEAAADAIKAGLDLDCGPFLGVHTQDAVKKGLLTEADVNNALVNTLKVQMRLGMFDGEPSAQAYGRLGPKDVCKPAHQELALEAARQGIVLLKNNGPTLPLSPQRHRTVAVIGPNSDVTVTMIGNYAGIACGYTSPLQGIGRYAKTIHQLGCSNVACRDDKQFGPALDAARHADATILVMGLDQSIEAETVDRTGLLLPGHQQDLVSKVAAASKGPTILVLMSGGPVDITFAKNDPKVAGILWAGYPGQAGGAAIADILFGTANPGGKLPVTWYPQEYLKNLAMTNMAMRPSKVGYPGRTYRFYKGPVVYPFGHGLTYTHFVHELSSAPTVVSVPVHGHRHGNNTNISNKAIRVTHARCGKLSIALHVDVKNVGSRDGTHTLLVFSAPPNGGNHWVPQKSLVAFEKVHVPAKTKQRVRVNIHVCKLLSVVDKSGIRRIPMGEHSLHIGDVKHSVSLQAEALGIIKS*