Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1119440 | XP_003624548.1 | 87.413 | 143 | 15 | 1 | 36 | 175 | 151 | 293 | 4.99e-84 | 259 |
| Msa1119440 | XP_003624548.1 | 95.918 | 49 | 2 | 0 | 1 | 49 | 1 | 49 | 4.17e-23 | 103 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1119440 | sp|Q39857|XTH1_SOYBN | 82.639 | 144 | 21 | 2 | 36 | 175 | 153 | 296 | 9.93e-81 | 244 |
| Msa1119440 | sp|Q39857|XTH1_SOYBN | 77.083 | 48 | 11 | 0 | 2 | 49 | 4 | 51 | 8.68e-12 | 65.1 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1119440 | A0A6A6LJX5 | 63.014 | 219 | 37 | 1 | 1 | 175 | 1 | 219 | 2.68e-92 | 277 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0037180 | Msa1119440 | 0.827763 | 1.307138e-54 | -8.615850e-47 |
| Msa0045810 | Msa1119440 | 0.817338 | 3.473066e-52 | -8.615850e-47 |
| Msa0092220 | Msa1119440 | 0.826606 | 2.473333e-54 | -8.615850e-47 |
| Msa0610700 | Msa1119440 | -0.801874 | 7.327903e-49 | -8.615850e-47 |
| Msa0617940 | Msa1119440 | 0.805556 | 1.260668e-49 | -8.615850e-47 |
| Msa0692790 | Msa1119440 | 0.807274 | 5.476242e-50 | -8.615850e-47 |
| Msa0703950 | Msa1119440 | 0.811941 | 5.441816e-51 | -8.615850e-47 |
| Msa0745140 | Msa1119440 | 0.818915 | 1.527560e-52 | -8.615850e-47 |
| Msa0746650 | Msa1119440 | 0.804579 | 2.018731e-49 | -8.615850e-47 |
| Msa0776640 | Msa1119440 | 0.817541 | 3.126733e-52 | -8.615850e-47 |
| Msa0825920 | Msa1119440 | 0.818278 | 2.130270e-52 | -8.615850e-47 |
| Msa0124910 | Msa1119440 | 0.801071 | 1.070279e-48 | -8.615850e-47 |
| Msa0139500 | Msa1119440 | 0.820972 | 5.171950e-53 | -8.615850e-47 |
| Msa0143590 | Msa1119440 | 0.811679 | 6.206781e-51 | -8.615850e-47 |
| Msa0177320 | Msa1119440 | 0.830698 | 2.536683e-55 | -8.615850e-47 |
| Msa0195230 | Msa1119440 | 0.821696 | 3.519771e-53 | -8.615850e-47 |
| Msa0195260 | Msa1119440 | 0.821128 | 4.759007e-53 | -8.615850e-47 |
| Msa0440350 | Msa1119440 | 0.807880 | 4.072998e-50 | -8.615850e-47 |
| Msa0982730 | Msa1119440 | 0.801952 | 7.061474e-49 | -8.615850e-47 |
| Msa1013190 | Msa1119440 | 0.815014 | 1.148601e-51 | -8.615850e-47 |
| Msa1019200 | Msa1119440 | 0.805516 | 1.285516e-49 | -8.615850e-47 |
| Msa1031170 | Msa1119440 | 0.882266 | 1.203486e-70 | -8.615850e-47 |
| Msa1068940 | Msa1119440 | 0.801896 | 7.253038e-49 | -8.615850e-47 |
| Msa1078830 | Msa1119440 | 0.827516 | 1.498847e-54 | -8.615850e-47 |
| Msa1078890 | Msa1119440 | 0.818065 | 2.381196e-52 | -8.615850e-47 |
| Msa1104110 | Msa1119440 | 0.814887 | 1.225129e-51 | -8.615850e-47 |
| Msa0256540 | Msa1119440 | 0.801166 | 1.023759e-48 | -8.615850e-47 |
| Msa0279000 | Msa1119440 | 0.804875 | 1.751265e-49 | -8.615850e-47 |
| Msa0354840 | Msa1119440 | 0.806381 | 8.455792e-50 | -8.615850e-47 |
| Msa1118800 | Msa1119440 | 0.813299 | 2.746695e-51 | -8.615850e-47 |
| Msa1119430 | Msa1119440 | 0.812171 | 4.848303e-51 | -8.615850e-47 |
| Msa1119440 | Msa1119450 | 0.804703 | 1.902120e-49 | -8.615850e-47 |
| Msa1119440 | Msa1147700 | 0.846508 | 2.078131e-59 | -8.615850e-47 |
| Msa1119440 | Msa1158200 | 0.821365 | 4.196780e-53 | -8.615850e-47 |
| Msa1119440 | Msa1158210 | 0.903082 | 5.008013e-79 | -8.615850e-47 |
| Msa1119440 | Msa1168310 | 0.816739 | 4.734754e-52 | -8.615850e-47 |
| Msa1119440 | Msa1169660 | 0.805626 | 1.219064e-49 | -8.615850e-47 |
| Msa1119440 | Msa1175410 | 0.808643 | 2.799852e-50 | -8.615850e-47 |
| Msa1119440 | Msa1257570 | 0.829348 | 5.413608e-55 | -8.615850e-47 |
| Msa1119440 | Msa1322980 | 0.812291 | 4.564341e-51 | -8.615850e-47 |
| Msa1119440 | Msa1323070 | 0.812751 | 3.621180e-51 | -8.615850e-47 |
| Msa1119440 | Msa1347390 | 0.808798 | 2.594893e-50 | -8.615850e-47 |
| Msa1119440 | Msa1383820 | 0.800839 | 1.194078e-48 | -8.615850e-47 |
| Msa1119440 | Msa1407840 | 0.803291 | 3.739256e-49 | -8.615850e-47 |
| Msa1119440 | Msa1437810 | 0.805673 | 1.191842e-49 | -8.615850e-47 |
| Msa1119440 | Msa1454500 | 0.809027 | 2.318251e-50 | -8.615850e-47 |
| Msa1119440 | Msa1458790 | 0.801860 | 7.375319e-49 | -8.615850e-47 |
| Msa0865420 | Msa1119440 | 0.830476 | 2.873990e-55 | -8.615850e-47 |
| Msa0945900 | Msa1119440 | 0.814994 | 1.160419e-51 | -8.615850e-47 |
| Msa0967780 | Msa1119440 | 0.802784 | 4.759101e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1119440 | MtrunA17_Chr7g0252621 | 87.413 | 143 | 15 | 1 | 36 | 175 | 151 | 293 | 4.59e-88 | 259 |
| Msa1119440 | MtrunA17_Chr7g0252621 | 95.918 | 49 | 2 | 0 | 1 | 49 | 1 | 49 | 3.83e-27 | 103 |
| Msa1119440 | MtrunA17_Chr7g0252631 | 86.713 | 143 | 16 | 1 | 36 | 175 | 151 | 293 | 1.21e-87 | 258 |
| Msa1119440 | MtrunA17_Chr7g0252631 | 93.878 | 49 | 3 | 0 | 1 | 49 | 1 | 49 | 3.27e-26 | 101 |
| Msa1119440 | MtrunA17_Chr7g0252601 | 75.524 | 143 | 32 | 1 | 36 | 175 | 151 | 293 | 1.56e-79 | 238 |
| Msa1119440 | MtrunA17_Chr7g0252601 | 72.000 | 50 | 14 | 0 | 1 | 50 | 1 | 50 | 2.09e-17 | 77.4 |
| Msa1119440 | MtrunA17_Chr6g0461731 | 77.622 | 143 | 29 | 1 | 36 | 175 | 174 | 316 | 3.78e-78 | 235 |
| Msa1119440 | MtrunA17_Chr6g0461731 | 63.265 | 49 | 18 | 0 | 1 | 49 | 24 | 72 | 1.62e-15 | 72.8 |
| Msa1119440 | MtrunA17_Chr6g0461761 | 76.224 | 143 | 31 | 1 | 36 | 175 | 151 | 293 | 2.53e-77 | 232 |
| Msa1119440 | MtrunA17_Chr6g0461761 | 59.184 | 49 | 20 | 0 | 1 | 49 | 1 | 49 | 4.21e-13 | 65.9 |
| Msa1119440 | MtrunA17_Chr2g0323161 | 48.062 | 129 | 59 | 2 | 53 | 173 | 162 | 290 | 4.39e-37 | 129 |
| Msa1119440 | MtrunA17_Chr4g0072611 | 54.167 | 120 | 49 | 3 | 54 | 170 | 165 | 281 | 1.04e-36 | 128 |
| Msa1119440 | MtrunA17_Chr4g0054431 | 44.604 | 139 | 73 | 2 | 34 | 169 | 150 | 287 | 1.47e-36 | 128 |
| Msa1119440 | MtrunA17_Chr4g0054451 | 44.604 | 139 | 73 | 2 | 34 | 169 | 152 | 289 | 1.57e-36 | 128 |
| Msa1119440 | MtrunA17_Chr4g0023961 | 47.200 | 125 | 58 | 2 | 53 | 169 | 164 | 288 | 1.29e-35 | 125 |
| Msa1119440 | MtrunA17_Chr3g0122031 | 47.222 | 144 | 65 | 3 | 34 | 173 | 145 | 281 | 1.39e-34 | 122 |
| Msa1119440 | MtrunA17_Chr3g0122021 | 47.222 | 144 | 65 | 3 | 34 | 173 | 145 | 281 | 1.57e-34 | 122 |
| Msa1119440 | MtrunA17_Chr8g0377841 | 48.592 | 142 | 63 | 4 | 34 | 171 | 148 | 283 | 3.07e-34 | 122 |
| Msa1119440 | MtrunA17_Chr4g0072681 | 52.033 | 123 | 54 | 2 | 54 | 171 | 123 | 245 | 1.17e-33 | 119 |
| Msa1119440 | MtrunA17_Chr7g0258911 | 52.941 | 119 | 50 | 3 | 54 | 169 | 164 | 279 | 2.48e-33 | 119 |
| Msa1119440 | MtrunA17_Chr6g0486581 | 41.958 | 143 | 76 | 4 | 34 | 169 | 141 | 283 | 3.42e-33 | 119 |
| Msa1119440 | MtrunA17_Chr4g0072641 | 50.427 | 117 | 42 | 3 | 54 | 169 | 47 | 148 | 3.65e-33 | 115 |
| Msa1119440 | MtrunA17_Chr4g0072671 | 50.000 | 126 | 51 | 3 | 54 | 171 | 166 | 287 | 4.07e-32 | 116 |
| Msa1119440 | MtrunA17_Chr4g0072601 | 47.059 | 119 | 57 | 3 | 54 | 169 | 168 | 283 | 2.61e-31 | 114 |
| Msa1119440 | MtrunA17_Chr4g0071341 | 48.760 | 121 | 53 | 3 | 54 | 169 | 165 | 281 | 6.59e-31 | 113 |
| Msa1119440 | MtrunA17_Chr1g0206081 | 41.844 | 141 | 78 | 2 | 34 | 170 | 155 | 295 | 1.59e-30 | 112 |
| Msa1119440 | MtrunA17_Chr1g0206681 | 40.426 | 141 | 79 | 3 | 34 | 169 | 151 | 291 | 3.05e-30 | 111 |
| Msa1119440 | MtrunA17_Chr8g0390201 | 40.690 | 145 | 75 | 5 | 34 | 169 | 67 | 209 | 5.30e-30 | 108 |
| Msa1119440 | MtrunA17_Chr2g0299061 | 47.200 | 125 | 53 | 3 | 54 | 169 | 166 | 286 | 5.83e-29 | 108 |
| Msa1119440 | MtrunA17_Chr8g0340001 | 35.252 | 139 | 86 | 2 | 34 | 169 | 94 | 231 | 4.04e-26 | 99.8 |
| Msa1119440 | MtrunA17_Chr8g0374231 | 45.098 | 102 | 55 | 1 | 70 | 170 | 1 | 102 | 6.15e-26 | 95.5 |
| Msa1119440 | MtrunA17_Chr3g0096651 | 35.606 | 132 | 72 | 3 | 49 | 175 | 165 | 288 | 5.52e-22 | 89.7 |
| Msa1119440 | MtrunA17_Chr8g0389641 | 38.525 | 122 | 31 | 2 | 53 | 173 | 168 | 246 | 3.43e-21 | 87.0 |
| Msa1119440 | MtrunA17_Chr5g0443391 | 35.833 | 120 | 70 | 2 | 53 | 171 | 167 | 280 | 9.35e-20 | 84.0 |
| Msa1119440 | MtrunA17_Chr7g0235541 | 36.441 | 118 | 69 | 3 | 53 | 170 | 97 | 208 | 1.43e-19 | 82.0 |
| Msa1119440 | MtrunA17_Chr2g0303721 | 36.879 | 141 | 76 | 8 | 34 | 170 | 140 | 271 | 1.09e-17 | 78.2 |
| Msa1119440 | MtrunA17_Chr4g0028221 | 34.314 | 102 | 63 | 2 | 68 | 169 | 207 | 304 | 4.02e-15 | 71.2 |
| Msa1119440 | MtrunA17_Chr8g0365231 | 29.630 | 108 | 71 | 1 | 68 | 170 | 204 | 311 | 1.73e-14 | 69.7 |
| Msa1119440 | MtrunA17_Chr2g0303861 | 34.615 | 130 | 76 | 6 | 34 | 159 | 147 | 271 | 5.36e-14 | 68.2 |
| Msa1119440 | MtrunA17_Chr5g0410621 | 28.571 | 119 | 78 | 3 | 57 | 170 | 190 | 306 | 7.33e-14 | 68.2 |
| Msa1119440 | MtrunA17_Chr7g0264731 | 34.906 | 106 | 64 | 3 | 64 | 169 | 191 | 291 | 1.28e-13 | 67.0 |
| Msa1119440 | MtrunA17_Chr1g0180451 | 29.861 | 144 | 80 | 4 | 42 | 169 | 156 | 294 | 5.85e-13 | 65.5 |
| Msa1119440 | MtrunA17_Chr2g0327411 | 28.777 | 139 | 90 | 4 | 34 | 169 | 177 | 309 | 9.02e-13 | 65.1 |
| Msa1119440 | MtrunA17_Chr8g0382041 | 27.660 | 141 | 90 | 4 | 36 | 169 | 159 | 294 | 1.24e-11 | 62.0 |
| Msa1119440 | MtrunA17_Chr8g0375981 | 30.769 | 117 | 72 | 4 | 57 | 169 | 179 | 290 | 6.31e-11 | 59.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1119440 | AT5G13870.2 | 71.034 | 145 | 39 | 1 | 34 | 175 | 149 | 293 | 2.21e-74 | 225 |
| Msa1119440 | AT5G13870.2 | 60.465 | 43 | 17 | 0 | 7 | 49 | 7 | 49 | 7.60e-13 | 65.5 |
| Msa1119440 | AT5G13870.1 | 71.034 | 145 | 39 | 1 | 34 | 175 | 149 | 293 | 2.21e-74 | 225 |
| Msa1119440 | AT5G13870.1 | 60.465 | 43 | 17 | 0 | 7 | 49 | 7 | 49 | 7.60e-13 | 65.5 |
| Msa1119440 | AT5G13870.3 | 71.034 | 145 | 39 | 1 | 34 | 175 | 149 | 293 | 2.21e-74 | 225 |
| Msa1119440 | AT5G13870.3 | 60.465 | 43 | 17 | 0 | 7 | 49 | 7 | 49 | 7.60e-13 | 65.5 |
| Msa1119440 | AT2G06850.2 | 70.139 | 144 | 40 | 1 | 34 | 174 | 92 | 235 | 6.14e-73 | 219 |
| Msa1119440 | AT2G06850.1 | 70.139 | 144 | 40 | 1 | 34 | 174 | 152 | 295 | 9.31e-73 | 221 |
| Msa1119440 | AT3G23730.1 | 50.340 | 147 | 66 | 3 | 34 | 173 | 144 | 290 | 2.20e-41 | 140 |
| Msa1119440 | AT5G65730.1 | 45.714 | 140 | 72 | 2 | 34 | 170 | 153 | 291 | 1.74e-39 | 135 |
| Msa1119440 | AT4G14130.1 | 49.660 | 147 | 64 | 4 | 34 | 173 | 145 | 288 | 1.49e-38 | 133 |
| Msa1119440 | AT4G03210.2 | 48.000 | 125 | 63 | 1 | 53 | 175 | 138 | 262 | 2.73e-37 | 129 |
| Msa1119440 | AT4G03210.1 | 48.000 | 125 | 63 | 1 | 53 | 175 | 166 | 290 | 5.80e-37 | 129 |
| Msa1119440 | AT5G57560.1 | 52.846 | 123 | 47 | 3 | 54 | 169 | 163 | 281 | 9.71e-37 | 128 |
| Msa1119440 | AT5G57550.1 | 47.183 | 142 | 67 | 3 | 34 | 171 | 147 | 284 | 5.04e-36 | 127 |
| Msa1119440 | AT5G48070.1 | 53.846 | 117 | 48 | 3 | 54 | 169 | 170 | 281 | 5.51e-35 | 124 |
| Msa1119440 | AT4G37800.1 | 42.857 | 140 | 76 | 2 | 34 | 170 | 152 | 290 | 4.53e-34 | 122 |
| Msa1119440 | AT4G30270.1 | 51.282 | 117 | 41 | 3 | 54 | 169 | 164 | 265 | 2.14e-33 | 119 |
| Msa1119440 | AT4G25810.1 | 50.000 | 122 | 51 | 4 | 54 | 169 | 166 | 283 | 2.41e-33 | 120 |
| Msa1119440 | AT4G30290.1 | 50.427 | 117 | 52 | 3 | 54 | 169 | 165 | 276 | 3.45e-33 | 119 |
| Msa1119440 | AT1G65310.1 | 51.282 | 117 | 51 | 3 | 54 | 169 | 170 | 281 | 1.26e-32 | 118 |
| Msa1119440 | AT1G65310.2 | 51.282 | 117 | 51 | 3 | 54 | 169 | 192 | 303 | 1.42e-32 | 118 |
| Msa1119440 | AT4G30280.1 | 49.573 | 117 | 53 | 3 | 54 | 169 | 170 | 281 | 2.82e-32 | 117 |
| Msa1119440 | AT5G57540.1 | 48.387 | 124 | 56 | 4 | 53 | 172 | 165 | 284 | 5.53e-31 | 114 |
| Msa1119440 | AT5G57530.1 | 47.581 | 124 | 57 | 4 | 53 | 172 | 166 | 285 | 1.83e-29 | 109 |
| Msa1119440 | AT2G14620.2 | 38.298 | 141 | 82 | 3 | 34 | 169 | 104 | 244 | 1.33e-28 | 106 |
| Msa1119440 | AT1G11545.1 | 40.559 | 143 | 79 | 3 | 34 | 170 | 158 | 300 | 1.47e-28 | 107 |
| Msa1119440 | AT2G14620.3 | 38.298 | 141 | 82 | 3 | 34 | 169 | 93 | 233 | 1.88e-28 | 106 |
| Msa1119440 | AT2G18800.1 | 38.065 | 155 | 74 | 5 | 34 | 169 | 145 | 296 | 2.39e-28 | 107 |
| Msa1119440 | AT2G14620.1 | 38.298 | 141 | 82 | 3 | 34 | 169 | 154 | 294 | 3.13e-28 | 107 |
| Msa1119440 | AT4G28850.1 | 37.838 | 148 | 84 | 4 | 34 | 173 | 144 | 291 | 5.46e-28 | 106 |
| Msa1119440 | AT4G13090.1 | 43.802 | 121 | 63 | 3 | 53 | 170 | 171 | 289 | 1.57e-27 | 105 |
| Msa1119440 | AT4G25820.1 | 45.902 | 122 | 58 | 3 | 53 | 170 | 169 | 286 | 2.23e-26 | 101 |
| Msa1119440 | AT4G13080.1 | 38.136 | 118 | 71 | 2 | 53 | 170 | 177 | 292 | 3.03e-24 | 96.3 |
| Msa1119440 | AT3G25050.1 | 40.000 | 120 | 65 | 4 | 53 | 169 | 174 | 289 | 4.33e-22 | 90.5 |
| Msa1119440 | AT1G32170.1 | 31.250 | 112 | 74 | 2 | 60 | 169 | 183 | 293 | 4.70e-16 | 74.7 |
| Msa1119440 | AT3G44990.1 | 32.609 | 138 | 85 | 4 | 34 | 169 | 162 | 293 | 7.95e-15 | 70.9 |
| Msa1119440 | AT1G10550.1 | 27.027 | 148 | 95 | 4 | 34 | 169 | 163 | 309 | 1.31e-13 | 67.8 |
| Msa1119440 | AT1G14720.1 | 25.180 | 139 | 100 | 2 | 34 | 169 | 153 | 290 | 1.59e-13 | 67.4 |
| Msa1119440 | AT2G36870.1 | 32.520 | 123 | 78 | 2 | 49 | 171 | 182 | 299 | 2.56e-13 | 66.6 |
| Msa1119440 | AT2G01850.1 | 26.619 | 139 | 98 | 2 | 34 | 169 | 153 | 290 | 2.66e-12 | 63.9 |
| Msa1119440 | AT4G18990.2 | 27.826 | 115 | 70 | 1 | 68 | 169 | 124 | 238 | 4.06e-12 | 63.2 |
| Msa1119440 | AT4G18990.1 | 29.310 | 116 | 67 | 2 | 68 | 169 | 198 | 312 | 6.53e-12 | 63.2 |
Find 45 sgRNAs with CRISPR-Local
Find 176 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACAAAATGAATTCTTCATTT+TGG | 0.155254 | 7_3:-68336066 | None:intergenic |
| TGAAGATATACAACAGTTTA+TGG | 0.169467 | 7_3:-68335058 | Msa1119440:CDS |
| ATCAGTGCAATAGTTGTAAA+TGG | 0.324527 | 7_3:+68334815 | None:intergenic |
| ATCTTCATTGGTTGGTCAAA+TGG | 0.328683 | 7_3:+68335074 | None:intergenic |
| GCATCAAGATCACGAAATTC+AGG | 0.366582 | 7_3:+68334879 | None:intergenic |
| AAACTGTTGTATATCTTCAT+TGG | 0.377706 | 7_3:+68335062 | None:intergenic |
| TACAAAGGTTTCCACATTGA+TGG | 0.385031 | 7_3:-68334963 | Msa1119440:CDS |
| GCCTGCTATGAATGGTGCTT+TGG | 0.386418 | 7_3:+68334986 | None:intergenic |
| GATCATATCAAATACTTCAA+TGG | 0.398017 | 7_3:-68335935 | Msa1119440:intron |
| GTTTATGGAATGCAGATGAT+TGG | 0.401396 | 7_3:-68335043 | Msa1119440:CDS |
| TTGGGCCACAAGAGGTGGTT+TGG | 0.402579 | 7_3:-68335024 | Msa1119440:CDS |
| TCTTCATTGGTTGGTCAAAT+GGG | 0.444373 | 7_3:+68335075 | None:intergenic |
| CTGCCAAATGGTACATCCAC+TGG | 0.465672 | 7_3:+68335983 | None:intergenic |
| CTCAATGGCGTAGACTAAGA+TGG | 0.467350 | 7_3:-68334854 | Msa1119440:CDS |
| GGGTAATAGTTTCTGCCAAA+TGG | 0.469874 | 7_3:+68335971 | None:intergenic |
| TTTATGGAATGCAGATGATT+GGG | 0.473254 | 7_3:-68335042 | Msa1119440:CDS |
| AAGCCAGTGGATGTACCATT+TGG | 0.479457 | 7_3:-68335986 | Msa1119440:CDS |
| GTGATCTTGATGCTGCTCAA+TGG | 0.483264 | 7_3:-68334869 | Msa1119440:CDS |
| TGTTGTATATCTTCATTGGT+TGG | 0.483857 | 7_3:+68335066 | None:intergenic |
| TTGCATTCTGGTGGAACTTG+AGG | 0.515049 | 7_3:+68334780 | None:intergenic |
| GCAGAAACTATTACCCCACT+TGG | 0.516801 | 7_3:-68335964 | Msa1119440:CDS |
| TTTCTCCAAACCACCTCTTG+TGG | 0.522277 | 7_3:+68335019 | None:intergenic |
| GGTACATCCACTGGCTTACG+TGG | 0.536614 | 7_3:+68335992 | None:intergenic |
| CCTTTGTAGCCTGCTATGAA+TGG | 0.547075 | 7_3:+68334978 | None:intergenic |
| TGCAAAGTTCTGTGCAACAC+AGG | 0.566307 | 7_3:-68334922 | Msa1119440:CDS |
| TCCAAAGCACCATTCATAGC+AGG | 0.568617 | 7_3:-68334987 | Msa1119440:CDS |
| GTGGTTTGGAGAAAACAGAT+TGG | 0.570318 | 7_3:-68335010 | Msa1119440:CDS |
| CCATTCATAGCAGGCTACAA+AGG | 0.570384 | 7_3:-68334978 | Msa1119440:CDS |
| CAGAAACTATTACCCCACTT+GGG | 0.575217 | 7_3:-68335963 | Msa1119440:CDS |
| GATGATTGGGCCACAAGAGG+TGG | 0.580281 | 7_3:-68335029 | Msa1119440:CDS |
| TCAATGGCGTAGACTAAGAT+GGG | 0.582539 | 7_3:-68334853 | Msa1119440:CDS |
| CAACACAGGGTAAAAGATGG+TGG | 0.587332 | 7_3:-68334908 | Msa1119440:CDS |
| CGATGAACATTTAAATGTCA+CGG | 0.595421 | 7_3:+68334751 | None:intergenic |
| GCAGATGATTGGGCCACAAG+AGG | 0.605501 | 7_3:-68335032 | Msa1119440:CDS |
| GCAAAGTTCTGTGCAACACA+GGG | 0.617237 | 7_3:-68334921 | Msa1119440:CDS |
| GTGCAACACAGGGTAAAAGA+TGG | 0.618331 | 7_3:-68334911 | Msa1119440:CDS |
| TACATCCACTGGCTTACGTG+GGG | 0.628936 | 7_3:+68335994 | None:intergenic |
| GTACATCCACTGGCTTACGT+GGG | 0.631735 | 7_3:+68335993 | None:intergenic |
| AACACAGGGTAAAAGATGGT+GGG | 0.641505 | 7_3:-68334907 | Msa1119440:CDS |
| ATATGATCAAAAGCCCAAGT+GGG | 0.644752 | 7_3:+68335950 | None:intergenic |
| GATATGATCAAAAGCCCAAG+TGG | 0.646471 | 7_3:+68335949 | None:intergenic |
| ACATCCACTGGCTTACGTGG+GGG | 0.655353 | 7_3:+68335995 | None:intergenic |
| ACAGAACTTTGCATTAACAG+AGG | 0.661986 | 7_3:+68334932 | None:intergenic |
| TATGATCAAAAGCCCAAGTG+GGG | 0.682880 | 7_3:+68335951 | None:intergenic |
| AGGATTCACAACCATCAATG+TGG | 0.698159 | 7_3:+68334952 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTAATTAATTACTCAAATT+TGG | + | chr7_3:68335637-68335656 | None:intergenic | 10.0% |
| !! | ATTAATTAATTACTCAAATT+TGG | + | chr7_3:68335637-68335656 | None:intergenic | 10.0% |
| !!! | TGAAAAAACTTTAATTTGTT+AGG | + | chr7_3:68335291-68335310 | None:intergenic | 15.0% |
| !!! | AATTTTTTTGAAACTATGAT+TGG | - | chr7_3:68335654-68335673 | Msa1119440:intron | 15.0% |
| !!! | TGAAAAAACTTTAATTTGTT+AGG | + | chr7_3:68335291-68335310 | None:intergenic | 15.0% |
| !!! | AATTTTTTTGAAACTATGAT+TGG | - | chr7_3:68335654-68335673 | Msa1119440:intron | 15.0% |
| !!! | TTTCTAACTACTTTTTTAAC+AGG | - | chr7_3:68335158-68335177 | Msa1119440:intron | 20.0% |
| !! | ACATTTGTTTGTAAAATGTA+AGG | + | chr7_3:68335436-68335455 | None:intergenic | 20.0% |
| !!! | TTTACTTTTTAGTTAGATCA+GGG | + | chr7_3:68335602-68335621 | None:intergenic | 20.0% |
| !!! | TTTTACTTTTTAGTTAGATC+AGG | + | chr7_3:68335603-68335622 | None:intergenic | 20.0% |
| !! | CTAAAAAGTAAAAACTATTG+TGG | - | chr7_3:68335610-68335629 | Msa1119440:intron | 20.0% |
| !!! | TTTCTAACTACTTTTTTAAC+AGG | - | chr7_3:68335158-68335177 | Msa1119440:intron | 20.0% |
| !! | ACATTTGTTTGTAAAATGTA+AGG | + | chr7_3:68335436-68335455 | None:intergenic | 20.0% |
| !!! | TTTACTTTTTAGTTAGATCA+GGG | + | chr7_3:68335602-68335621 | None:intergenic | 20.0% |
| !!! | TTTTACTTTTTAGTTAGATC+AGG | + | chr7_3:68335603-68335622 | None:intergenic | 20.0% |
| !! | CTAAAAAGTAAAAACTATTG+TGG | - | chr7_3:68335610-68335629 | Msa1119440:intron | 20.0% |
| ! | GATCATATCAAATACTTCAA+TGG | - | chr7_3:68334887-68334906 | Msa1119440:CDS | 25.0% |
| !! | TAGTACGAGTTTAAAACTAA+GGG | + | chr7_3:68335127-68335146 | None:intergenic | 25.0% |
| ! | TTTCAGTATGAACATTAAGA+TGG | - | chr7_3:68335220-68335239 | Msa1119440:intron | 25.0% |
| ! | AAACTGTTGTATATCTTCAT+TGG | + | chr7_3:68335763-68335782 | None:intergenic | 25.0% |
| ! | TGAAGATATACAACAGTTTA+TGG | - | chr7_3:68335764-68335783 | Msa1119440:intron | 25.0% |
| ! | GATCATATCAAATACTTCAA+TGG | - | chr7_3:68334887-68334906 | Msa1119440:CDS | 25.0% |
| !! | TAGTACGAGTTTAAAACTAA+GGG | + | chr7_3:68335127-68335146 | None:intergenic | 25.0% |
| ! | TTTCAGTATGAACATTAAGA+TGG | - | chr7_3:68335220-68335239 | Msa1119440:intron | 25.0% |
| ! | AAACTGTTGTATATCTTCAT+TGG | + | chr7_3:68335763-68335782 | None:intergenic | 25.0% |
| ! | TGAAGATATACAACAGTTTA+TGG | - | chr7_3:68335764-68335783 | Msa1119440:intron | 25.0% |
| CATATCAAATACTTCAATGG+TGG | - | chr7_3:68334890-68334909 | Msa1119440:CDS | 30.0% | |
| TGTACTTATCAAGATGAAGT+TGG | + | chr7_3:68334925-68334944 | None:intergenic | 30.0% | |
| ! | GTAGTACGAGTTTAAAACTA+AGG | + | chr7_3:68335128-68335147 | None:intergenic | 30.0% |
| !!! | ACTACTTTTTTAACAGGTAC+TGG | - | chr7_3:68335164-68335183 | Msa1119440:intron | 30.0% |
| !!! | TGAGATAGATTTTGAGTTCT+TGG | - | chr7_3:68335393-68335412 | Msa1119440:intron | 30.0% |
| !!! | GAGATAGATTTTGAGTTCTT+GGG | - | chr7_3:68335394-68335413 | Msa1119440:intron | 30.0% |
| !!! | AGATAGATTTTGAGTTCTTG+GGG | - | chr7_3:68335395-68335414 | Msa1119440:intron | 30.0% |
| TTACAAACAAATGTGTTCAC+TGG | - | chr7_3:68335442-68335461 | Msa1119440:intron | 30.0% | |
| AAGAACAAAGGATCTTTCTT+TGG | - | chr7_3:68335479-68335498 | Msa1119440:intron | 30.0% | |
| ! | TATCTGTGAAACTCTTTTGT+TGG | + | chr7_3:68335511-68335530 | None:intergenic | 30.0% |
| !!! | ATTGGTTTGCAGATTTTTTG+TGG | - | chr7_3:68335672-68335691 | Msa1119440:intron | 30.0% |
| !!! | CTGTTTTTGAACACTCTTAT+TGG | + | chr7_3:68335706-68335725 | None:intergenic | 30.0% |
| TGTTGTATATCTTCATTGGT+TGG | + | chr7_3:68335759-68335778 | None:intergenic | 30.0% | |
| TTTATGGAATGCAGATGATT+GGG | - | chr7_3:68335780-68335799 | Msa1119440:intron | 30.0% | |
| ATCAGTGCAATAGTTGTAAA+TGG | + | chr7_3:68336010-68336029 | None:intergenic | 30.0% | |
| CATATCAAATACTTCAATGG+TGG | - | chr7_3:68334890-68334909 | Msa1119440:CDS | 30.0% | |
| TGTACTTATCAAGATGAAGT+TGG | + | chr7_3:68334925-68334944 | None:intergenic | 30.0% | |
| ! | GTAGTACGAGTTTAAAACTA+AGG | + | chr7_3:68335128-68335147 | None:intergenic | 30.0% |
| !!! | ACTACTTTTTTAACAGGTAC+TGG | - | chr7_3:68335164-68335183 | Msa1119440:intron | 30.0% |
| !!! | TGAGATAGATTTTGAGTTCT+TGG | - | chr7_3:68335393-68335412 | Msa1119440:intron | 30.0% |
| !!! | GAGATAGATTTTGAGTTCTT+GGG | - | chr7_3:68335394-68335413 | Msa1119440:intron | 30.0% |
| !!! | AGATAGATTTTGAGTTCTTG+GGG | - | chr7_3:68335395-68335414 | Msa1119440:intron | 30.0% |
| TTACAAACAAATGTGTTCAC+TGG | - | chr7_3:68335442-68335461 | Msa1119440:intron | 30.0% | |
| AAGAACAAAGGATCTTTCTT+TGG | - | chr7_3:68335479-68335498 | Msa1119440:intron | 30.0% | |
| ! | TATCTGTGAAACTCTTTTGT+TGG | + | chr7_3:68335511-68335530 | None:intergenic | 30.0% |
| !!! | ATTGGTTTGCAGATTTTTTG+TGG | - | chr7_3:68335672-68335691 | Msa1119440:intron | 30.0% |
| !!! | CTGTTTTTGAACACTCTTAT+TGG | + | chr7_3:68335706-68335725 | None:intergenic | 30.0% |
| TGTTGTATATCTTCATTGGT+TGG | + | chr7_3:68335759-68335778 | None:intergenic | 30.0% | |
| TTTATGGAATGCAGATGATT+GGG | - | chr7_3:68335780-68335799 | Msa1119440:intron | 30.0% | |
| ATCAGTGCAATAGTTGTAAA+TGG | + | chr7_3:68336010-68336029 | None:intergenic | 30.0% | |
| ATATGATCAAAAGCCCAAGT+GGG | + | chr7_3:68334875-68334894 | None:intergenic | 35.0% | |
| CTTCATCTTGATAAGTACAC+TGG | - | chr7_3:68334926-68334945 | Msa1119440:CDS | 35.0% | |
| !! | TTTTCTATTTAGCTCGTGCT+CGG | - | chr7_3:68334973-68334992 | Msa1119440:CDS | 35.0% |
| TCCAAAGGTTCATACTTGTT+TGG | - | chr7_3:68335194-68335213 | Msa1119440:intron | 35.0% | |
| ACCAAACAAGTATGAACCTT+TGG | + | chr7_3:68335198-68335217 | None:intergenic | 35.0% | |
| GACAAGGTAACAAAGAACAA+AGG | - | chr7_3:68335467-68335486 | Msa1119440:intron | 35.0% | |
| TTCACAGATACTCCATTCTA+TGG | - | chr7_3:68335521-68335540 | Msa1119440:intron | 35.0% | |
| CAAGTAGTACTTACACAATC+TGG | + | chr7_3:68335555-68335574 | None:intergenic | 35.0% | |
| !! | AAGAGTGTTCAAAAACAGCA+AGG | - | chr7_3:68335708-68335727 | Msa1119440:intron | 35.0% |
| TTCAAAAACAGCAAGGACTT+AGG | - | chr7_3:68335715-68335734 | Msa1119440:intron | 35.0% | |
| ! | TCTTCATTGGTTGGTCAAAT+GGG | + | chr7_3:68335750-68335769 | None:intergenic | 35.0% |
| ! | ATCTTCATTGGTTGGTCAAA+TGG | + | chr7_3:68335751-68335770 | None:intergenic | 35.0% |
| GTTTATGGAATGCAGATGAT+TGG | - | chr7_3:68335779-68335798 | Msa1119440:intron | 35.0% | |
| TACAAAGGTTTCCACATTGA+TGG | - | chr7_3:68335859-68335878 | Msa1119440:intron | 35.0% | |
| ACAGAACTTTGCATTAACAG+AGG | + | chr7_3:68335893-68335912 | None:intergenic | 35.0% | |
| ATATGATCAAAAGCCCAAGT+GGG | + | chr7_3:68334875-68334894 | None:intergenic | 35.0% | |
| CTTCATCTTGATAAGTACAC+TGG | - | chr7_3:68334926-68334945 | Msa1119440:CDS | 35.0% | |
| !! | TTTTCTATTTAGCTCGTGCT+CGG | - | chr7_3:68334973-68334992 | Msa1119440:CDS | 35.0% |
| TCCAAAGGTTCATACTTGTT+TGG | - | chr7_3:68335194-68335213 | Msa1119440:intron | 35.0% | |
| ACCAAACAAGTATGAACCTT+TGG | + | chr7_3:68335198-68335217 | None:intergenic | 35.0% | |
| GACAAGGTAACAAAGAACAA+AGG | - | chr7_3:68335467-68335486 | Msa1119440:intron | 35.0% | |
| TTCACAGATACTCCATTCTA+TGG | - | chr7_3:68335521-68335540 | Msa1119440:intron | 35.0% | |
| CAAGTAGTACTTACACAATC+TGG | + | chr7_3:68335555-68335574 | None:intergenic | 35.0% | |
| !! | AAGAGTGTTCAAAAACAGCA+AGG | - | chr7_3:68335708-68335727 | Msa1119440:intron | 35.0% |
| TTCAAAAACAGCAAGGACTT+AGG | - | chr7_3:68335715-68335734 | Msa1119440:intron | 35.0% | |
| ! | TCTTCATTGGTTGGTCAAAT+GGG | + | chr7_3:68335750-68335769 | None:intergenic | 35.0% |
| ! | ATCTTCATTGGTTGGTCAAA+TGG | + | chr7_3:68335751-68335770 | None:intergenic | 35.0% |
| GTTTATGGAATGCAGATGAT+TGG | - | chr7_3:68335779-68335798 | Msa1119440:intron | 35.0% | |
| TACAAAGGTTTCCACATTGA+TGG | - | chr7_3:68335859-68335878 | Msa1119440:intron | 35.0% | |
| ACAGAACTTTGCATTAACAG+AGG | + | chr7_3:68335893-68335912 | None:intergenic | 35.0% | |
| GGGTAATAGTTTCTGCCAAA+TGG | + | chr7_3:68334854-68334873 | None:intergenic | 40.0% | |
| CAGAAACTATTACCCCACTT+GGG | - | chr7_3:68334859-68334878 | Msa1119440:CDS | 40.0% | |
| TATGATCAAAAGCCCAAGTG+GGG | + | chr7_3:68334874-68334893 | None:intergenic | 40.0% | |
| GATATGATCAAAAGCCCAAG+TGG | + | chr7_3:68334876-68334895 | None:intergenic | 40.0% | |
| AGCGCTTGTGTATAAGCTAT+AGG | - | chr7_3:68335043-68335062 | Msa1119440:CDS | 40.0% | |
| ! | CGAGTTTAAAACTAAGGGCA+TGG | + | chr7_3:68335122-68335141 | None:intergenic | 40.0% |
| !!! | GGTACTGGTTTTCAATCCAA+AGG | - | chr7_3:68335179-68335198 | Msa1119440:intron | 40.0% |
| ATGAACATTAAGATGGTCCC+TGG | - | chr7_3:68335227-68335246 | Msa1119440:intron | 40.0% | |
| CAAACAAATGTGTTCACTGG+TGG | - | chr7_3:68335445-68335464 | Msa1119440:intron | 40.0% | |
| CTGGTACATGTTCCATAGAA+TGG | + | chr7_3:68335536-68335555 | None:intergenic | 40.0% | |
| ! | GTGGTTTGGAGAAAACAGAT+TGG | - | chr7_3:68335812-68335831 | Msa1119440:intron | 40.0% |
| AGGATTCACAACCATCAATG+TGG | + | chr7_3:68335873-68335892 | None:intergenic | 40.0% | |
| AACACAGGGTAAAAGATGGT+GGG | - | chr7_3:68335915-68335934 | Msa1119440:intron | 40.0% | |
| GCATCAAGATCACGAAATTC+AGG | + | chr7_3:68335946-68335965 | None:intergenic | 40.0% | |
| TCAATGGCGTAGACTAAGAT+GGG | - | chr7_3:68335969-68335988 | Msa1119440:CDS | 40.0% | |
| GGGTAATAGTTTCTGCCAAA+TGG | + | chr7_3:68334854-68334873 | None:intergenic | 40.0% | |
| CAGAAACTATTACCCCACTT+GGG | - | chr7_3:68334859-68334878 | Msa1119440:CDS | 40.0% | |
| TATGATCAAAAGCCCAAGTG+GGG | + | chr7_3:68334874-68334893 | None:intergenic | 40.0% | |
| GATATGATCAAAAGCCCAAG+TGG | + | chr7_3:68334876-68334895 | None:intergenic | 40.0% | |
| AGCGCTTGTGTATAAGCTAT+AGG | - | chr7_3:68335043-68335062 | Msa1119440:CDS | 40.0% | |
| ! | CGAGTTTAAAACTAAGGGCA+TGG | + | chr7_3:68335122-68335141 | None:intergenic | 40.0% |
| !!! | GGTACTGGTTTTCAATCCAA+AGG | - | chr7_3:68335179-68335198 | Msa1119440:intron | 40.0% |
| ATGAACATTAAGATGGTCCC+TGG | - | chr7_3:68335227-68335246 | Msa1119440:intron | 40.0% | |
| CAAACAAATGTGTTCACTGG+TGG | - | chr7_3:68335445-68335464 | Msa1119440:intron | 40.0% | |
| CTGGTACATGTTCCATAGAA+TGG | + | chr7_3:68335536-68335555 | None:intergenic | 40.0% | |
| ! | GTGGTTTGGAGAAAACAGAT+TGG | - | chr7_3:68335812-68335831 | Msa1119440:intron | 40.0% |
| AGGATTCACAACCATCAATG+TGG | + | chr7_3:68335873-68335892 | None:intergenic | 40.0% | |
| AACACAGGGTAAAAGATGGT+GGG | - | chr7_3:68335915-68335934 | Msa1119440:intron | 40.0% | |
| GCATCAAGATCACGAAATTC+AGG | + | chr7_3:68335946-68335965 | None:intergenic | 40.0% | |
| TCAATGGCGTAGACTAAGAT+GGG | - | chr7_3:68335969-68335988 | Msa1119440:CDS | 40.0% | |
| AAGCCAGTGGATGTACCATT+TGG | - | chr7_3:68334836-68334855 | Msa1119440:CDS | 45.0% | |
| GCAGAAACTATTACCCCACT+TGG | - | chr7_3:68334858-68334877 | Msa1119440:CDS | 45.0% | |
| ! | AATGTGTTCACTGGTGGACA+AGG | - | chr7_3:68335451-68335470 | Msa1119440:intron | 45.0% |
| TTTCTCCAAACCACCTCTTG+TGG | + | chr7_3:68335806-68335825 | None:intergenic | 45.0% | |
| ! | TCCAAAGCACCATTCATAGC+AGG | - | chr7_3:68335835-68335854 | Msa1119440:intron | 45.0% |
| CCTTTGTAGCCTGCTATGAA+TGG | + | chr7_3:68335847-68335866 | None:intergenic | 45.0% | |
| CCATTCATAGCAGGCTACAA+AGG | - | chr7_3:68335844-68335863 | Msa1119440:intron | 45.0% | |
| TGCAAAGTTCTGTGCAACAC+AGG | - | chr7_3:68335900-68335919 | Msa1119440:intron | 45.0% | |
| GCAAAGTTCTGTGCAACACA+GGG | - | chr7_3:68335901-68335920 | Msa1119440:intron | 45.0% | |
| GTGCAACACAGGGTAAAAGA+TGG | - | chr7_3:68335911-68335930 | Msa1119440:intron | 45.0% | |
| CAACACAGGGTAAAAGATGG+TGG | - | chr7_3:68335914-68335933 | Msa1119440:intron | 45.0% | |
| GTGATCTTGATGCTGCTCAA+TGG | - | chr7_3:68335953-68335972 | Msa1119440:CDS | 45.0% | |
| CTCAATGGCGTAGACTAAGA+TGG | - | chr7_3:68335968-68335987 | Msa1119440:CDS | 45.0% | |
| TTGCATTCTGGTGGAACTTG+AGG | + | chr7_3:68336045-68336064 | None:intergenic | 45.0% | |
| ! | TCACGGTCTCTTTTGCATTC+TGG | + | chr7_3:68336057-68336076 | None:intergenic | 45.0% |
| AAGCCAGTGGATGTACCATT+TGG | - | chr7_3:68334836-68334855 | Msa1119440:CDS | 45.0% | |
| GCAGAAACTATTACCCCACT+TGG | - | chr7_3:68334858-68334877 | Msa1119440:CDS | 45.0% | |
| ! | AATGTGTTCACTGGTGGACA+AGG | - | chr7_3:68335451-68335470 | Msa1119440:intron | 45.0% |
| TTTCTCCAAACCACCTCTTG+TGG | + | chr7_3:68335806-68335825 | None:intergenic | 45.0% | |
| ! | TCCAAAGCACCATTCATAGC+AGG | - | chr7_3:68335835-68335854 | Msa1119440:intron | 45.0% |
| CCTTTGTAGCCTGCTATGAA+TGG | + | chr7_3:68335847-68335866 | None:intergenic | 45.0% | |
| CCATTCATAGCAGGCTACAA+AGG | - | chr7_3:68335844-68335863 | Msa1119440:intron | 45.0% | |
| TGCAAAGTTCTGTGCAACAC+AGG | - | chr7_3:68335900-68335919 | Msa1119440:intron | 45.0% | |
| GCAAAGTTCTGTGCAACACA+GGG | - | chr7_3:68335901-68335920 | Msa1119440:intron | 45.0% | |
| GTGCAACACAGGGTAAAAGA+TGG | - | chr7_3:68335911-68335930 | Msa1119440:intron | 45.0% | |
| CAACACAGGGTAAAAGATGG+TGG | - | chr7_3:68335914-68335933 | Msa1119440:intron | 45.0% | |
| GTGATCTTGATGCTGCTCAA+TGG | - | chr7_3:68335953-68335972 | Msa1119440:CDS | 45.0% | |
| CTCAATGGCGTAGACTAAGA+TGG | - | chr7_3:68335968-68335987 | Msa1119440:CDS | 45.0% | |
| TTGCATTCTGGTGGAACTTG+AGG | + | chr7_3:68336045-68336064 | None:intergenic | 45.0% | |
| ! | TCACGGTCTCTTTTGCATTC+TGG | + | chr7_3:68336057-68336076 | None:intergenic | 45.0% |
| !! | TACATCCACTGGCTTACGTG+GGG | + | chr7_3:68334831-68334850 | None:intergenic | 50.0% |
| !! | GTACATCCACTGGCTTACGT+GGG | + | chr7_3:68334832-68334851 | None:intergenic | 50.0% |
| CTGCCAAATGGTACATCCAC+TGG | + | chr7_3:68334842-68334861 | None:intergenic | 50.0% | |
| CTGTTCCAGCTGAATCACCA+GGG | + | chr7_3:68335247-68335266 | None:intergenic | 50.0% | |
| ACTGTTCCAGCTGAATCACC+AGG | + | chr7_3:68335248-68335267 | None:intergenic | 50.0% | |
| GAGTTCTTGGGGAACAGAAC+AGG | - | chr7_3:68335406-68335425 | Msa1119440:intron | 50.0% | |
| GCCTGCTATGAATGGTGCTT+TGG | + | chr7_3:68335839-68335858 | None:intergenic | 50.0% | |
| ! | CGGTCTCTTTTGCATTCTGG+TGG | + | chr7_3:68336054-68336073 | None:intergenic | 50.0% |
| !! | TACATCCACTGGCTTACGTG+GGG | + | chr7_3:68334831-68334850 | None:intergenic | 50.0% |
| !! | GTACATCCACTGGCTTACGT+GGG | + | chr7_3:68334832-68334851 | None:intergenic | 50.0% |
| CTGCCAAATGGTACATCCAC+TGG | + | chr7_3:68334842-68334861 | None:intergenic | 50.0% | |
| CTGTTCCAGCTGAATCACCA+GGG | + | chr7_3:68335247-68335266 | None:intergenic | 50.0% | |
| ACTGTTCCAGCTGAATCACC+AGG | + | chr7_3:68335248-68335267 | None:intergenic | 50.0% | |
| GAGTTCTTGGGGAACAGAAC+AGG | - | chr7_3:68335406-68335425 | Msa1119440:intron | 50.0% | |
| GCCTGCTATGAATGGTGCTT+TGG | + | chr7_3:68335839-68335858 | None:intergenic | 50.0% | |
| ! | CGGTCTCTTTTGCATTCTGG+TGG | + | chr7_3:68336054-68336073 | None:intergenic | 50.0% |
| !! | ACATCCACTGGCTTACGTGG+GGG | + | chr7_3:68334830-68334849 | None:intergenic | 55.0% |
| !! | GGTACATCCACTGGCTTACG+TGG | + | chr7_3:68334833-68334852 | None:intergenic | 55.0% |
| ATGGTCCCTGGTGATTCAGC+TGG | - | chr7_3:68335239-68335258 | Msa1119440:intron | 55.0% | |
| GCAGATGATTGGGCCACAAG+AGG | - | chr7_3:68335790-68335809 | Msa1119440:intron | 55.0% | |
| GATGATTGGGCCACAAGAGG+TGG | - | chr7_3:68335793-68335812 | Msa1119440:intron | 55.0% | |
| TTGGGCCACAAGAGGTGGTT+TGG | - | chr7_3:68335798-68335817 | Msa1119440:intron | 55.0% | |
| !! | ACATCCACTGGCTTACGTGG+GGG | + | chr7_3:68334830-68334849 | None:intergenic | 55.0% |
| !! | GGTACATCCACTGGCTTACG+TGG | + | chr7_3:68334833-68334852 | None:intergenic | 55.0% |
| ATGGTCCCTGGTGATTCAGC+TGG | - | chr7_3:68335239-68335258 | Msa1119440:intron | 55.0% | |
| GCAGATGATTGGGCCACAAG+AGG | - | chr7_3:68335790-68335809 | Msa1119440:intron | 55.0% | |
| GATGATTGGGCCACAAGAGG+TGG | - | chr7_3:68335793-68335812 | Msa1119440:intron | 55.0% | |
| TTGGGCCACAAGAGGTGGTT+TGG | - | chr7_3:68335798-68335817 | Msa1119440:intron | 55.0% | |
| TGCTCCCCCACGTAAGCCAG+TGG | - | chr7_3:68334823-68334842 | Msa1119440:CDS | 65.0% | |
| TGCTCCCCCACGTAAGCCAG+TGG | - | chr7_3:68334823-68334842 | Msa1119440:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_3 | gene | 68334761 | 68336083 | 68334761 | ID=Msa1119440;Name=Msa1119440 |
| chr7_3 | mRNA | 68334761 | 68336083 | 68334761 | ID=Msa1119440-mRNA-1;Parent=Msa1119440;Name=Msa1119440-mRNA-1;_AED=0.43;_eAED=0.43;_QI=0|0|0|1|0|0|3|0|175 |
| chr7_3 | exon | 68335936 | 68336083 | 68335936 | ID=Msa1119440-mRNA-1:exon:17151;Parent=Msa1119440-mRNA-1 |
| chr7_3 | exon | 68335154 | 68335160 | 68335154 | ID=Msa1119440-mRNA-1:exon:17150;Parent=Msa1119440-mRNA-1 |
| chr7_3 | exon | 68334761 | 68335133 | 68334761 | ID=Msa1119440-mRNA-1:exon:17149;Parent=Msa1119440-mRNA-1 |
| chr7_3 | CDS | 68335936 | 68336083 | 68335936 | ID=Msa1119440-mRNA-1:cds;Parent=Msa1119440-mRNA-1 |
| chr7_3 | CDS | 68335154 | 68335160 | 68335154 | ID=Msa1119440-mRNA-1:cds;Parent=Msa1119440-mRNA-1 |
| chr7_3 | CDS | 68334761 | 68335133 | 68334761 | ID=Msa1119440-mRNA-1:cds;Parent=Msa1119440-mRNA-1 |
| Gene Sequence |
| Protein sequence |
