Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0402770 | XP_003601304.1 | 98.876 | 267 | 3 | 0 | 1 | 267 | 1 | 267 | 0.0 | 541 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0402770 | sp|F4IK01|AUG1_ARATH | 74.621 | 264 | 66 | 1 | 5 | 267 | 13 | 276 | 8.88e-142 | 404 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0402770 | G7J611 | 98.876 | 267 | 3 | 0 | 1 | 267 | 1 | 267 | 0.0 | 541 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0001800 | Msa0402770 | 0.819847 | 9.365756e-53 | -8.615850e-47 |
| Msa0013270 | Msa0402770 | 0.817647 | 2.959160e-52 | -8.615850e-47 |
| Msa0037180 | Msa0402770 | 0.808861 | 2.515237e-50 | -8.615850e-47 |
| Msa0037680 | Msa0402770 | 0.828224 | 1.012509e-54 | -8.615850e-47 |
| Msa0039750 | Msa0402770 | 0.822666 | 2.096698e-53 | -8.615850e-47 |
| Msa0040860 | Msa0402770 | -0.811010 | 8.670917e-51 | -8.615850e-47 |
| Msa0044530 | Msa0402770 | -0.804221 | 2.396893e-49 | -8.615850e-47 |
| Msa0044780 | Msa0402770 | -0.831764 | 1.387168e-55 | -8.615850e-47 |
| Msa0045810 | Msa0402770 | 0.805601 | 1.233608e-49 | -8.615850e-47 |
| Msa0046200 | Msa0402770 | 0.805786 | 1.128012e-49 | -8.615850e-47 |
| Msa0046970 | Msa0402770 | 0.848031 | 7.940365e-60 | -8.615850e-47 |
| Msa0091090 | Msa0402770 | -0.805988 | 1.023068e-49 | -8.615850e-47 |
| Msa0091240 | Msa0402770 | -0.800947 | 1.134924e-48 | -8.615850e-47 |
| Msa0092220 | Msa0402770 | 0.800797 | 1.217793e-48 | -8.615850e-47 |
| Msa0106540 | Msa0402770 | 0.806628 | 7.499589e-50 | -8.615850e-47 |
| Msa0139500 | Msa0402770 | 0.802363 | 5.812850e-49 | -8.615850e-47 |
| Msa0177320 | Msa0402770 | 0.805542 | 1.269273e-49 | -8.615850e-47 |
| Msa0195230 | Msa0402770 | 0.855224 | 7.282094e-62 | -8.615850e-47 |
| Msa0195260 | Msa0402770 | 0.855024 | 8.327010e-62 | -8.615850e-47 |
| Msa0211460 | Msa0402770 | 0.812265 | 4.624018e-51 | -8.615850e-47 |
| Msa0225070 | Msa0402770 | -0.812080 | 5.074659e-51 | -8.615850e-47 |
| Msa0234170 | Msa0402770 | 0.829001 | 6.570783e-55 | -8.615850e-47 |
| Msa0371350 | Msa0402770 | -0.814942 | 1.191151e-51 | -8.615850e-47 |
| Msa0386880 | Msa0402770 | 0.834789 | 2.445483e-56 | -8.615850e-47 |
| Msa0387740 | Msa0402770 | -0.800739 | 1.251405e-48 | -8.615850e-47 |
| Msa0402770 | Msa0412580 | -0.808097 | 3.661353e-50 | -8.615850e-47 |
| Msa0402770 | Msa0438680 | -0.805972 | 1.031212e-49 | -8.615850e-47 |
| Msa0402770 | Msa0457070 | -0.811996 | 5.294823e-51 | -8.615850e-47 |
| Msa0402770 | Msa0467170 | 0.835924 | 1.263848e-56 | -8.615850e-47 |
| Msa0402770 | Msa0467330 | 0.848718 | 5.125675e-60 | -8.615850e-47 |
| Msa0402770 | Msa0473910 | 0.800315 | 1.526479e-48 | -8.615850e-47 |
| Msa0402770 | Msa0484210 | -0.806149 | 9.461981e-50 | -8.615850e-47 |
| Msa0402770 | Msa0506750 | 0.813619 | 2.335083e-51 | -8.615850e-47 |
| Msa0402770 | Msa0518530 | 0.818549 | 1.849958e-52 | -8.615850e-47 |
| Msa0402770 | Msa0521510 | 0.800746 | 1.247189e-48 | -8.615850e-47 |
| Msa0402770 | Msa0521530 | 0.816107 | 6.556918e-52 | -8.615850e-47 |
| Msa0402770 | Msa0525880 | 0.827192 | 1.791458e-54 | -8.615850e-47 |
| Msa0402770 | Msa0555280 | 0.838151 | 3.409676e-57 | -8.615850e-47 |
| Msa0402770 | Msa0567330 | 0.805353 | 1.390478e-49 | -8.615850e-47 |
| Msa0402770 | Msa0567610 | 0.808417 | 3.129027e-50 | -8.615850e-47 |
| Msa0402770 | Msa0574900 | 0.818676 | 1.731086e-52 | -8.615850e-47 |
| Msa0402770 | Msa0605530 | 0.810808 | 9.587242e-51 | -8.615850e-47 |
| Msa0402770 | Msa0606820 | 0.804948 | 1.690862e-49 | -8.615850e-47 |
| Msa0402770 | Msa0608820 | 0.862049 | 6.671174e-64 | -8.615850e-47 |
| Msa0402770 | Msa0610700 | -0.821181 | 4.627984e-53 | -8.615850e-47 |
| Msa0402770 | Msa0618840 | 0.813915 | 2.009630e-51 | -8.615850e-47 |
| Msa0402770 | Msa0618990 | 0.809767 | 1.608305e-50 | -8.615850e-47 |
| Msa0402770 | Msa0661480 | 0.806588 | 7.648823e-50 | -8.615850e-47 |
| Msa0402770 | Msa0685020 | 0.826224 | 3.051333e-54 | -8.615850e-47 |
| Msa0402770 | Msa0689830 | 0.840188 | 1.010845e-57 | -8.615850e-47 |
| Msa0402770 | Msa0691610 | 0.854492 | 1.187060e-61 | -8.615850e-47 |
| Msa0402770 | Msa0701090 | -0.803001 | 4.293584e-49 | -8.615850e-47 |
| Msa0402770 | Msa0704690 | 0.800277 | 1.554515e-48 | -8.615850e-47 |
| Msa0402770 | Msa0708980 | 0.807137 | 5.854781e-50 | -8.615850e-47 |
| Msa0402770 | Msa0719270 | 0.827383 | 1.612458e-54 | -8.615850e-47 |
| Msa0402770 | Msa0732970 | 0.843811 | 1.113709e-58 | -8.615850e-47 |
| Msa0402770 | Msa0745140 | 0.856070 | 4.124082e-62 | -8.615850e-47 |
| Msa0402770 | Msa0746650 | 0.962433 | 7.161756e-121 | -8.615850e-47 |
| Msa0402770 | Msa0761830 | 0.800021 | 1.751762e-48 | -8.615850e-47 |
| Msa0402770 | Msa0772220 | 0.824171 | 9.324118e-54 | -8.615850e-47 |
| Msa0402770 | Msa0773960 | 0.854296 | 1.352920e-61 | -8.615850e-47 |
| Msa0402770 | Msa0775660 | 0.809747 | 1.623887e-50 | -8.615850e-47 |
| Msa0402770 | Msa0776640 | 0.858700 | 6.881607e-63 | -8.615850e-47 |
| Msa0402770 | Msa0790650 | -0.803246 | 3.819576e-49 | -8.615850e-47 |
| Msa0402770 | Msa0804170 | 0.825946 | 3.552244e-54 | -8.615850e-47 |
| Msa0402770 | Msa0825920 | 0.851607 | 7.949738e-61 | -8.615850e-47 |
| Msa0402770 | Msa0837710 | 0.800590 | 1.341715e-48 | -8.615850e-47 |
| Msa0402770 | Msa0838620 | -0.808624 | 2.826110e-50 | -8.615850e-47 |
| Msa0402770 | Msa0840520 | 0.827922 | 1.197091e-54 | -8.615850e-47 |
| Msa0402770 | Msa0846900 | 0.801292 | 9.647041e-49 | -8.615850e-47 |
| Msa0402770 | Msa0865420 | 0.848999 | 4.284641e-60 | -8.615850e-47 |
| Msa0402770 | Msa0866530 | 0.815969 | 7.039087e-52 | -8.615850e-47 |
| Msa0402770 | Msa0880910 | 0.805140 | 1.541413e-49 | -8.615850e-47 |
| Msa0402770 | Msa0903340 | 0.808434 | 3.103391e-50 | -8.615850e-47 |
| Msa0402770 | Msa0930770 | 0.845529 | 3.837344e-59 | -8.615850e-47 |
| Msa0402770 | Msa0945030 | 0.834784 | 2.453627e-56 | -8.615850e-47 |
| Msa0402770 | Msa0967780 | 0.811427 | 7.038612e-51 | -8.615850e-47 |
| Msa0402770 | Msa0967900 | -0.804732 | 1.875512e-49 | -8.615850e-47 |
| Msa0402770 | Msa0970270 | 0.801196 | 1.009024e-48 | -8.615850e-47 |
| Msa0402770 | Msa0981670 | 0.825089 | 5.668230e-54 | -8.615850e-47 |
| Msa0402770 | Msa0982730 | 0.966226 | 1.222441e-125 | -8.615850e-47 |
| Msa0402770 | Msa1041170 | 0.809916 | 1.493222e-50 | -8.615850e-47 |
| Msa0402770 | Msa1050260 | 0.810954 | 8.913371e-51 | -8.615850e-47 |
| Msa0402770 | Msa1068940 | 0.802247 | 6.142686e-49 | -8.615850e-47 |
| Msa0402770 | Msa1124210 | 0.820684 | 6.022643e-53 | -8.615850e-47 |
| Msa0402770 | Msa1147700 | 0.817791 | 2.746010e-52 | -8.615850e-47 |
| Msa0402770 | Msa1165460 | 0.819822 | 9.489988e-53 | -8.615850e-47 |
| Msa0402770 | Msa1201170 | 0.834028 | 3.798593e-56 | -8.615850e-47 |
| Msa0402770 | Msa1205270 | -0.829559 | 4.810680e-55 | -8.615850e-47 |
| Msa0402770 | Msa1206040 | 0.810081 | 1.376253e-50 | -8.615850e-47 |
| Msa0402770 | Msa1217890 | 0.805308 | 1.421043e-49 | -8.615850e-47 |
| Msa0402770 | Msa1255030 | -0.812250 | 4.659272e-51 | -8.615850e-47 |
| Msa0402770 | Msa1266120 | -0.820976 | 5.160360e-53 | -8.615850e-47 |
| Msa0402770 | Msa1286860 | -0.803230 | 3.849481e-49 | -8.615850e-47 |
| Msa0402770 | Msa1294280 | 0.819408 | 1.180008e-52 | -8.615850e-47 |
| Msa0402770 | Msa1295210 | -0.807786 | 4.264396e-50 | -8.615850e-47 |
| Msa0402770 | Msa1297220 | -0.836774 | 7.681871e-57 | -8.615850e-47 |
| Msa0402770 | Msa1315500 | 0.805159 | 1.526965e-49 | -8.615850e-47 |
| Msa0402770 | Msa1322980 | 0.804664 | 1.937945e-49 | -8.615850e-47 |
| Msa0402770 | Msa1323260 | -0.832934 | 7.118598e-56 | -8.615850e-47 |
| Msa0402770 | Msa1328280 | 0.803896 | 2.800303e-49 | -8.615850e-47 |
| Msa0402770 | Msa1328870 | 0.811622 | 6.384504e-51 | -8.615850e-47 |
| Msa0402770 | Msa1343450 | -0.827337 | 1.653903e-54 | -8.615850e-47 |
| Msa0402770 | Msa1347390 | 0.981243 | 4.060261e-152 | -8.615850e-47 |
| Msa0402770 | Msa1361990 | 0.805298 | 1.428153e-49 | -8.615850e-47 |
| Msa0402770 | Msa1365820 | 0.824956 | 6.094991e-54 | -8.615850e-47 |
| Msa0402770 | Msa1368390 | 0.818021 | 2.435818e-52 | -8.615850e-47 |
| Msa0402770 | Msa1375000 | -0.822118 | 2.810455e-53 | -8.615850e-47 |
| Msa0402770 | Msa1382830 | 0.808949 | 2.408904e-50 | -8.615850e-47 |
| Msa0402770 | Msa1402010 | 0.800440 | 1.439648e-48 | -8.615850e-47 |
| Msa0402770 | Msa1405830 | 0.806963 | 6.371250e-50 | -8.615850e-47 |
| Msa0402770 | Msa1413020 | 0.824441 | 8.056821e-54 | -8.615850e-47 |
| Msa0402770 | Msa1414780 | -0.804046 | 2.606602e-49 | -8.615850e-47 |
| Msa0402770 | Msa1436620 | 0.824749 | 6.818740e-54 | -8.615850e-47 |
| Msa0402770 | Msa1457770 | 0.801214 | 1.000864e-48 | -8.615850e-47 |
| Msa0402770 | Msa1458790 | 0.812264 | 4.626351e-51 | -8.615850e-47 |
| Msa0240540 | Msa0402770 | 0.823254 | 1.529218e-53 | -8.615850e-47 |
| Msa0240590 | Msa0402770 | -0.809652 | 1.702157e-50 | -8.615850e-47 |
| Msa0267450 | Msa0402770 | -0.822656 | 2.108045e-53 | -8.615850e-47 |
| Msa0267510 | Msa0402770 | -0.825520 | 4.482804e-54 | -8.615850e-47 |
| Msa0276850 | Msa0402770 | 0.811418 | 7.072232e-51 | -8.615850e-47 |
| Msa0276860 | Msa0402770 | 0.836339 | 9.918618e-57 | -8.615850e-47 |
| Msa0279000 | Msa0402770 | 0.850818 | 1.327675e-60 | -8.615850e-47 |
| Msa0307430 | Msa0402770 | 0.802638 | 5.101803e-49 | -8.615850e-47 |
| Msa0316000 | Msa0402770 | 0.820915 | 5.330518e-53 | -8.615850e-47 |
| Msa0326710 | Msa0402770 | 0.805056 | 1.604661e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0402770 | MtrunA17_Chr3g0118481 | 98.876 | 267 | 3 | 0 | 1 | 267 | 1 | 267 | 0.0 | 541 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0402770 | AT2G41350.1 | 74.905 | 263 | 66 | 0 | 5 | 267 | 13 | 275 | 2.83e-144 | 407 |
| Msa0402770 | AT2G41350.2 | 74.621 | 264 | 66 | 1 | 5 | 267 | 13 | 276 | 9.03e-143 | 404 |
| Msa0402770 | AT2G21980.1 | 77.500 | 40 | 9 | 0 | 228 | 267 | 1 | 40 | 2.46e-14 | 66.6 |
Find 94 sgRNAs with CRISPR-Local
Find 330 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACCTGCAACTTCGAAGGTTT+TGG | 0.267923 | 3_2:-31406356 | None:intergenic |
| GAGACGAGCGGCTTCGTCTT+TGG | 0.285848 | 3_2:-31406452 | None:intergenic |
| TCAGTCTCCACAGAAGTTTC+TGG | 0.296590 | 3_2:+31406307 | Msa0402770:CDS |
| TGCAAGGATTAGAGAGATTC+TGG | 0.305262 | 3_2:+31406610 | Msa0402770:CDS |
| AGAGATTAGCCATAGGGTTT+TGG | 0.308633 | 3_2:+31409734 | Msa0402770:CDS |
| TGGACCCGGTTTATTTATCT+TGG | 0.314175 | 3_2:+31406121 | None:intergenic |
| TCCAAAACCTTCGAAGTTGC+AGG | 0.358974 | 3_2:+31406355 | Msa0402770:CDS |
| TGCCTACAACAATGATATAT+TGG | 0.367113 | 3_2:+31410135 | Msa0402770:three_prime_UTR |
| GCGTGGTGTGTATTCGAATT+CGG | 0.370925 | 3_2:-31406389 | None:intergenic |
| ATCTATATTCTGCGGCTTTG+AGG | 0.378929 | 3_2:-31406492 | None:intergenic |
| GAGCTACTTCATCTTCCAAT+TGG | 0.383390 | 3_2:-31407303 | None:intergenic |
| TTGAACCAAGATAAATAAAC+CGG | 0.390870 | 3_2:-31406126 | None:intergenic |
| TTTAGCTTTCTTGTGGCAAT+GGG | 0.405983 | 3_2:+31406819 | Msa0402770:intron |
| CGTGGTGTGTATTCGAATTC+GGG | 0.408134 | 3_2:-31406388 | None:intergenic |
| CGAGGTTAACATATTTGAAA+AGG | 0.410169 | 3_2:+31406937 | Msa0402770:CDS |
| GCGACGGTGGTGATTGGAAA+TGG | 0.413115 | 3_2:-31406202 | None:intergenic |
| TATTTAGCGACGGTGGTGAT+TGG | 0.415970 | 3_2:-31406208 | None:intergenic |
| AAAACCCTATGGCTAATCTC+TGG | 0.417355 | 3_2:-31409732 | None:intergenic |
| TCTTCTCGATTATACTAGAA+AGG | 0.427173 | 3_2:+31406908 | Msa0402770:CDS |
| GTGCAGAACACTAGCCCAAT+TGG | 0.431088 | 3_2:+31407288 | Msa0402770:intron |
| GTGTATTCGAATTCGGGAAC+GGG | 0.431311 | 3_2:-31406382 | None:intergenic |
| GATTCTGGAGAATGTAGGTT+TGG | 0.441568 | 3_2:+31406625 | Msa0402770:CDS |
| AGAGAGATTCTGGAGAATGT+AGG | 0.442677 | 3_2:+31406620 | Msa0402770:CDS |
| GAAATACCGGAGGCAAATCT+TGG | 0.443503 | 3_2:-31409827 | None:intergenic |
| CAATGTGGTTGCGTCGGCGC+AGG | 0.443838 | 3_2:+31406667 | Msa0402770:CDS |
| AGACCGGTGTGGAGGAGAAA+AGG | 0.446370 | 3_2:+31406859 | Msa0402770:CDS |
| CACCAATATATCATTGTTGT+AGG | 0.454100 | 3_2:-31410137 | None:intergenic |
| GGTAACTTCTTAGAGTATCA+AGG | 0.454855 | 3_2:-31409806 | None:intergenic |
| TTGGTGGTTCAGTTGATGAA+TGG | 0.466511 | 3_2:+31410154 | Msa0402770:three_prime_UTR |
| AGCTACTTCATCTTCCAATT+GGG | 0.469118 | 3_2:-31407302 | None:intergenic |
| GAAAAGGGCTAAAGTGCATA+AGG | 0.474248 | 3_2:+31406875 | Msa0402770:CDS |
| TGTGTATTCGAATTCGGGAA+CGG | 0.481161 | 3_2:-31406383 | None:intergenic |
| TAAGAGATACTGAACTTAGT+AGG | 0.497045 | 3_2:+31406720 | Msa0402770:CDS |
| AAACCCTATGGCTAATCTCT+GGG | 0.498715 | 3_2:-31409731 | None:intergenic |
| AAATAAACTAACCTCATAGT+TGG | 0.499847 | 3_2:-31407407 | None:intergenic |
| GGACATTGATTCTCGAAGTC+AGG | 0.503089 | 3_2:-31406272 | None:intergenic |
| GGAGAATGTAGGTTTGGCTC+AGG | 0.504384 | 3_2:+31406631 | Msa0402770:CDS |
| GATTATCCAGGATAAAGCTC+TGG | 0.506748 | 3_2:+31409936 | Msa0402770:intron |
| ACCGTCCAATGTGGTTGCGT+CGG | 0.519517 | 3_2:+31406661 | Msa0402770:CDS |
| GGCTGAGCATAGGAAGGAGC+TGG | 0.522874 | 3_2:+31409764 | Msa0402770:CDS |
| GACCGGTGTGGAGGAGAAAA+GGG | 0.529132 | 3_2:+31406860 | Msa0402770:CDS |
| CTGCGCCGACGCAACCACAT+TGG | 0.532875 | 3_2:-31406666 | None:intergenic |
| GCAAGCAGCTCTTCTAAATG+AGG | 0.535611 | 3_2:+31410025 | Msa0402770:exon |
| AGCTCCGTGTGAGGCTCAGA+TGG | 0.536186 | 3_2:+31407321 | Msa0402770:CDS |
| GATATTTCATTGAGGAAGAC+CGG | 0.541804 | 3_2:+31406843 | Msa0402770:CDS |
| GTCAGGATCGGAGAGGTGGT+TGG | 0.543430 | 3_2:-31406255 | None:intergenic |
| GCAACAATGTGCCAACTATG+AGG | 0.550825 | 3_2:+31407396 | Msa0402770:CDS |
| CTTCTTAGAGTATCAAGGAT+GGG | 0.552403 | 3_2:-31409801 | None:intergenic |
| TAGGCAGCAGTATACAAGCC+TGG | 0.553223 | 3_2:-31410118 | None:intergenic |
| TACCCCAGAGATTAGCCATA+GGG | 0.553381 | 3_2:+31409728 | Msa0402770:CDS |
| GGGTTTACCTGCAACTTCGA+AGG | 0.554455 | 3_2:-31406362 | None:intergenic |
| GTGAGGCTCAGATGGAAAGT+TGG | 0.555194 | 3_2:+31407329 | Msa0402770:CDS |
| CAAGCAGCTCTTCTAAATGA+GGG | 0.558176 | 3_2:+31410026 | Msa0402770:exon |
| AGCATAGGAAGGAGCTGGAG+AGG | 0.563485 | 3_2:+31409769 | Msa0402770:CDS |
| GAATCAGCGAAGTAAAAGAA+TGG | 0.564127 | 3_2:+31406329 | Msa0402770:CDS |
| CCATGTCAACCAAAACCCTA+TGG | 0.565389 | 3_2:-31409743 | None:intergenic |
| TCGATCTGTGATGTGGTGGT+TGG | 0.568177 | 3_2:-31406172 | None:intergenic |
| ACCTTGGGATCTATATTCTG+CGG | 0.568417 | 3_2:-31406500 | None:intergenic |
| CTACAACAATGATATATTGG+TGG | 0.574874 | 3_2:+31410138 | Msa0402770:three_prime_UTR |
| TGGTTGACATGGCTGAGCAT+AGG | 0.579448 | 3_2:+31409754 | Msa0402770:CDS |
| GCAGACGAGGCTCAACCGTG+TGG | 0.588667 | 3_2:+31409701 | Msa0402770:intron |
| AAGTTACCAAGATTTGCCTC+CGG | 0.589613 | 3_2:+31409821 | Msa0402770:CDS |
| GCCGCAGAATATAGATCCCA+AGG | 0.591800 | 3_2:+31406499 | Msa0402770:CDS |
| CTTTCCATCTGAGCCTCACA+CGG | 0.596528 | 3_2:-31407325 | None:intergenic |
| ACTTCTTAGAGTATCAAGGA+TGG | 0.600198 | 3_2:-31409802 | None:intergenic |
| GCCGACGCAACCACATTGGA+CGG | 0.603040 | 3_2:-31406662 | None:intergenic |
| ATACAATATTTCTATATGAG+TGG | 0.605899 | 3_2:-31410196 | None:intergenic |
| TTGATTCTCGAAGTCAGGAT+CGG | 0.606465 | 3_2:-31406267 | None:intergenic |
| GGAGACTGATGCTTCTTGAT+CGG | 0.607951 | 3_2:-31406293 | None:intergenic |
| ATTGAGGAAGACCGGTGTGG+AGG | 0.608171 | 3_2:+31406851 | Msa0402770:CDS |
| ATACCCCAGAGATTAGCCAT+AGG | 0.609024 | 3_2:+31409727 | Msa0402770:CDS |
| CTTTAGAGAGAGTAACGAGA+TGG | 0.609598 | 3_2:-31406429 | None:intergenic |
| GCTGATTCCAGAAACTTCTG+TGG | 0.613746 | 3_2:-31406314 | None:intergenic |
| CGAAGTCAGGATCGGAGAGG+TGG | 0.616882 | 3_2:-31406259 | None:intergenic |
| TGACATGGCTGAGCATAGGA+AGG | 0.617304 | 3_2:+31409758 | Msa0402770:CDS |
| GCACGGTGGTTATTTAGCGA+CGG | 0.620879 | 3_2:-31406218 | None:intergenic |
| CAATGGGTGATATTTCATTG+AGG | 0.630300 | 3_2:+31406835 | Msa0402770:CDS |
| TCGCTAAATAACCACCGTGC+CGG | 0.630367 | 3_2:+31406221 | Msa0402770:five_prime_UTR |
| TTCAAGACGCTTCTCAGCAG+CGG | 0.631015 | 3_2:-31409994 | None:intergenic |
| CAGACGAGGCTCAACCGTGT+GGG | 0.631934 | 3_2:+31409702 | Msa0402770:intron |
| ATCACGAGCGACGAGACGAG+CGG | 0.645010 | 3_2:-31406464 | None:intergenic |
| GAGCAATTACTTGAATGTGA+TGG | 0.645492 | 3_2:+31407351 | Msa0402770:CDS |
| TTCATTGAGGAAGACCGGTG+TGG | 0.650963 | 3_2:+31406848 | Msa0402770:CDS |
| TCGATCGATCTGTGATGTGG+TGG | 0.654220 | 3_2:-31406176 | None:intergenic |
| AACCCTATGGCTAATCTCTG+GGG | 0.660250 | 3_2:-31409730 | None:intergenic |
| CGGTGGTTATTTAGCGACGG+TGG | 0.664949 | 3_2:-31406215 | None:intergenic |
| ATACTAGAAAGGCTATTGCG+AGG | 0.667502 | 3_2:+31406919 | Msa0402770:CDS |
| GGAGAGTTTACCGTCCAATG+TGG | 0.679839 | 3_2:+31406652 | Msa0402770:CDS |
| AAGCAGCTCTTCTAAATGAG+GGG | 0.682093 | 3_2:+31410027 | Msa0402770:exon |
| AGATGAAGTAGCTCCGTGTG+AGG | 0.688922 | 3_2:+31407312 | Msa0402770:CDS |
| TCTCTGGGGTATAGCCCACA+CGG | 0.692148 | 3_2:-31409716 | None:intergenic |
| AGATCGATCGATCTGTGATG+TGG | 0.700311 | 3_2:-31406179 | None:intergenic |
| TCTCGAAGTCAGGATCGGAG+AGG | 0.752484 | 3_2:-31406262 | None:intergenic |
| TGCAAGTGAGAGACACTGCG+TGG | 0.791418 | 3_2:-31406406 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TATTACTTTTTTATGAAATA+AGG | + | chr3_2:31408574-31408593 | Msa0402770:intron | 10.0% |
| !!! | ATGGAAATATTAATTATTTT+AGG | + | chr3_2:31409161-31409180 | Msa0402770:intron | 10.0% |
| !!! | TGGAAATATTAATTATTTTA+GGG | + | chr3_2:31409162-31409181 | Msa0402770:intron | 10.0% |
| !!! | TTTTGTTATTTCAATATTCT+AGG | - | chr3_2:31407637-31407656 | None:intergenic | 15.0% |
| !! | GTATATAAATAGGATAAATT+TGG | + | chr3_2:31408079-31408098 | Msa0402770:intron | 15.0% |
| !! | TATTATTAATGAAATTCTCT+GGG | + | chr3_2:31408197-31408216 | Msa0402770:intron | 15.0% |
| !!! | AAATGATGATAGTATTTTTT+AGG | + | chr3_2:31408451-31408470 | Msa0402770:intron | 15.0% |
| !!! | TTTTGTGATAAAATTCATTT+TGG | - | chr3_2:31408996-31409015 | None:intergenic | 15.0% |
| !!! | AATGAATTTTATCACAAAAT+TGG | + | chr3_2:31408997-31409016 | Msa0402770:intron | 15.0% |
| !!! | ATGAATTTTATCACAAAATT+GGG | + | chr3_2:31408998-31409017 | Msa0402770:intron | 15.0% |
| !!! | GCATTGTTATTTTTATATAT+TGG | + | chr3_2:31409645-31409664 | Msa0402770:intron | 15.0% |
| !! | TCTGTATAAGTTAAAAAAAT+TGG | + | chr3_2:31410226-31410245 | Msa0402770:three_prime_UTR | 15.0% |
| !!! | ATGTGTTAAAGTTTGAATTT+TGG | + | chr3_2:31406784-31406803 | Msa0402770:intron | 20.0% |
| !!! | TAAAGTTTGAATTTTGGAAT+TGG | + | chr3_2:31406790-31406809 | Msa0402770:intron | 20.0% |
| !!! | AAAGTTTGAATTTTGGAATT+GGG | + | chr3_2:31406791-31406810 | Msa0402770:intron | 20.0% |
| !! | TTAACATATTTGAAAAGGTA+TGG | + | chr3_2:31406942-31406961 | Msa0402770:intron | 20.0% |
| !!! | TGGTTTTGAACTAAAAATTT+AGG | + | chr3_2:31406962-31406981 | Msa0402770:intron | 20.0% |
| !! | GTAAAAATGTAAAATGAATG+TGG | + | chr3_2:31407137-31407156 | Msa0402770:intron | 20.0% |
| !! | TGAATTTGATGTTAGATAAA+AGG | + | chr3_2:31407510-31407529 | Msa0402770:intron | 20.0% |
| !!! | ATTTTAGCTGTAATTTTTGT+CGG | + | chr3_2:31407806-31407825 | Msa0402770:intron | 20.0% |
| !! | TCTTAATTGAAAACAATTCT+GGG | - | chr3_2:31408022-31408041 | None:intergenic | 20.0% |
| !! | TTCTTAATTGAAAACAATTC+TGG | - | chr3_2:31408023-31408042 | None:intergenic | 20.0% |
| !! | ATAAATAGGATAAATTTGGA+TGG | + | chr3_2:31408083-31408102 | Msa0402770:intron | 20.0% |
| !! | ATTTAGAAAATTTGTGTAGA+AGG | + | chr3_2:31408130-31408149 | Msa0402770:intron | 20.0% |
| !! | GAGAATTTCATTAATAATAC+TGG | - | chr3_2:31408196-31408215 | None:intergenic | 20.0% |
| !! | GTATTATTAATGAAATTCTC+TGG | + | chr3_2:31408196-31408215 | Msa0402770:intron | 20.0% |
| !!! | ACTTGAATTTGACAATTTTA+AGG | - | chr3_2:31408681-31408700 | None:intergenic | 20.0% |
| !!! | GATTAATACTTGTTAATGTT+CGG | + | chr3_2:31408712-31408731 | Msa0402770:intron | 20.0% |
| !! | AAGATCATCAAACATAAAAA+AGG | + | chr3_2:31408767-31408786 | Msa0402770:intron | 20.0% |
| !! | AGATCATCAAACATAAAAAA+GGG | + | chr3_2:31408768-31408787 | Msa0402770:intron | 20.0% |
| !!! | TGAATTTTATCACAAAATTG+GGG | + | chr3_2:31408999-31409018 | Msa0402770:intron | 20.0% |
| !!! | AATTTAATTTGTCCAATCAA+AGG | - | chr3_2:31409089-31409108 | None:intergenic | 20.0% |
| !! | AGAATATCATAACATAGATT+GGG | - | chr3_2:31409379-31409398 | None:intergenic | 20.0% |
| !! | AAGAATATCATAACATAGAT+TGG | - | chr3_2:31409380-31409399 | None:intergenic | 20.0% |
| !!! | TTTTTTATCTTCAATTGCTA+AGG | - | chr3_2:31409965-31409984 | None:intergenic | 20.0% |
| !! | TTAGCAATTGAAGATAAAAA+AGG | + | chr3_2:31409964-31409983 | Msa0402770:CDS | 20.0% |
| !!! | TAATTTCAAAGCACATTTTT+TGG | + | chr3_2:31410068-31410087 | Msa0402770:three_prime_UTR | 20.0% |
| !!! | AATTTCAAAGCACATTTTTT+GGG | + | chr3_2:31410069-31410088 | Msa0402770:three_prime_UTR | 20.0% |
| !!! | ATACAATATTTCTATATGAG+TGG | - | chr3_2:31410199-31410218 | None:intergenic | 20.0% |
| !!! | TTTAGCATTGATACATAACT+TGG | + | chr3_2:31406997-31407016 | Msa0402770:intron | 25.0% |
| ! | AGCTGTAAAAATTAATACTG+TGG | + | chr3_2:31407036-31407055 | Msa0402770:intron | 25.0% |
| ! | TAGTCAAATTAAAACTGTCT+AGG | - | chr3_2:31407176-31407195 | None:intergenic | 25.0% |
| ! | AAATAAACTAACCTCATAGT+TGG | - | chr3_2:31407410-31407429 | None:intergenic | 25.0% |
| !!! | AGGTTAGTTTATTTGTTTTG+AGG | + | chr3_2:31407416-31407435 | Msa0402770:intron | 25.0% |
| !!! | GGTTAGTTTATTTGTTTTGA+GGG | + | chr3_2:31407417-31407436 | Msa0402770:intron | 25.0% |
| !!! | GTTAGTTTATTTGTTTTGAG+GGG | + | chr3_2:31407418-31407437 | Msa0402770:intron | 25.0% |
| !!! | TTAGTTTATTTGTTTTGAGG+GGG | + | chr3_2:31407419-31407438 | Msa0402770:intron | 25.0% |
| ! | CAAGAGATATAGTTAGAAAA+AGG | + | chr3_2:31407554-31407573 | Msa0402770:intron | 25.0% |
| ! | TGCAATAAAACCAGTTTAAT+GGG | - | chr3_2:31407610-31407629 | None:intergenic | 25.0% |
| ! | ATGCAATAAAACCAGTTTAA+TGG | - | chr3_2:31407611-31407630 | None:intergenic | 25.0% |
| ! | TCAGTGTCTATCTTATAAAT+GGG | - | chr3_2:31408332-31408351 | None:intergenic | 25.0% |
| ! | AATCAAGAAAGAATGAGATT+TGG | + | chr3_2:31408481-31408500 | Msa0402770:intron | 25.0% |
| ! | ATCAAGAAAGAATGAGATTT+GGG | + | chr3_2:31408482-31408501 | Msa0402770:intron | 25.0% |
| ! | TAATAGATTGTAACACATGT+GGG | - | chr3_2:31408556-31408575 | None:intergenic | 25.0% |
| ! | ATAATAGATTGTAACACATG+TGG | - | chr3_2:31408557-31408576 | None:intergenic | 25.0% |
| !! | TTTATGTTTGATGATCTTGA+TGG | - | chr3_2:31408765-31408784 | None:intergenic | 25.0% |
| ! | GATCATCAAACATAAAAAAG+GGG | + | chr3_2:31408769-31408788 | Msa0402770:intron | 25.0% |
| ! | ATCATCAAACATAAAAAAGG+GGG | + | chr3_2:31408770-31408789 | Msa0402770:intron | 25.0% |
| !!! | GTGATAAAATTCATTTTGGT+AGG | - | chr3_2:31408992-31409011 | None:intergenic | 25.0% |
| !!! | TAATTATTTTAGGGTCTGTT+CGG | + | chr3_2:31409171-31409190 | Msa0402770:intron | 25.0% |
| !!! | TTAAGAGAGTCAGTTTTTTT+TGG | - | chr3_2:31409488-31409507 | None:intergenic | 25.0% |
| ! | ACGGATAACATATTATAAAC+TGG | + | chr3_2:31409596-31409615 | Msa0402770:intron | 25.0% |
| ! | GCATGAAAAATATGAAATAC+CGG | - | chr3_2:31409843-31409862 | None:intergenic | 25.0% |
| !!! | CTTTCTATTTGTTTTAGTTC+TGG | + | chr3_2:31409862-31409881 | Msa0402770:intron | 25.0% |
| ! | TAACCCTAATTGGTGATAAT+GGG | - | chr3_2:31406538-31406557 | None:intergenic | 30.0% |
| ATTATCACCAATTAGGGTTA+GGG | + | chr3_2:31406538-31406557 | Msa0402770:intron | 30.0% | |
| TAAGAGATACTGAACTTAGT+AGG | + | chr3_2:31406720-31406739 | Msa0402770:CDS | 30.0% | |
| !!! | GGTTTTTTTTAGCTTTCTTG+TGG | + | chr3_2:31406812-31406831 | Msa0402770:intron | 30.0% |
| TCTTCTCGATTATACTAGAA+AGG | + | chr3_2:31406908-31406927 | Msa0402770:CDS | 30.0% | |
| CGAGGTTAACATATTTGAAA+AGG | + | chr3_2:31406937-31406956 | Msa0402770:CDS | 30.0% | |
| TGTAAAATGAATGTGGAACT+TGG | + | chr3_2:31407144-31407163 | Msa0402770:intron | 30.0% | |
| ! | GAGCACATTATTGTAGTTTT+TGG | - | chr3_2:31407199-31407218 | None:intergenic | 30.0% |
| AAAACTACAATAATGTGCTC+AGG | + | chr3_2:31407199-31407218 | Msa0402770:intron | 30.0% | |
| AAACTACAATAATGTGCTCA+GGG | + | chr3_2:31407200-31407219 | Msa0402770:intron | 30.0% | |
| !!! | TAGTTTATTTGTTTTGAGGG+GGG | + | chr3_2:31407420-31407439 | Msa0402770:intron | 30.0% |
| ATGTTAGATAAAAGGCTGTA+GGG | + | chr3_2:31407518-31407537 | Msa0402770:intron | 30.0% | |
| AGTTAGAAAAAGGACAGAAA+AGG | + | chr3_2:31407564-31407583 | Msa0402770:intron | 30.0% | |
| ACTTGAACAAGAGAAACAAA+AGG | + | chr3_2:31407660-31407679 | Msa0402770:intron | 30.0% | |
| TTTCGTATAGCAATTCAGTT+TGG | - | chr3_2:31407844-31407863 | None:intergenic | 30.0% | |
| TTGTTAGGGTAAAGAAATGA+GGG | + | chr3_2:31407971-31407990 | Msa0402770:intron | 30.0% | |
| AGAAGGATGTTAAGTAAATC+AGG | + | chr3_2:31408147-31408166 | Msa0402770:intron | 30.0% | |
| !! | ATAATACTGGCTCTATTCAA+TGG | - | chr3_2:31408183-31408202 | None:intergenic | 30.0% |
| TAGAACACATAGAATTGAAG+TGG | + | chr3_2:31408240-31408259 | Msa0402770:intron | 30.0% | |
| AGAACACATAGAATTGAAGT+GGG | + | chr3_2:31408241-31408260 | Msa0402770:intron | 30.0% | |
| GTCAGTGTCTATCTTATAAA+TGG | - | chr3_2:31408333-31408352 | None:intergenic | 30.0% | |
| TACTATCATCATTTCGTCAA+TGG | - | chr3_2:31408445-31408464 | None:intergenic | 30.0% | |
| AAAGAATGAGATTTGGGAAT+TGG | + | chr3_2:31408488-31408507 | Msa0402770:intron | 30.0% | |
| AGATTTGGGAATTGGAAATT+GGG | + | chr3_2:31408496-31408515 | Msa0402770:intron | 30.0% | |
| GGGTAAAAGATCATAAAGTT+TGG | + | chr3_2:31408516-31408535 | Msa0402770:intron | 30.0% | |
| AATAGATTGTAACACATGTG+GGG | - | chr3_2:31408555-31408574 | None:intergenic | 30.0% | |
| AATAAGGAAATGTTGTTCAG+TGG | + | chr3_2:31408590-31408609 | Msa0402770:intron | 30.0% | |
| ATAAGGAAATGTTGTTCAGT+GGG | + | chr3_2:31408591-31408610 | Msa0402770:intron | 30.0% | |
| AAGGAGTAAATTTGATTCTG+AGG | + | chr3_2:31408620-31408639 | Msa0402770:intron | 30.0% | |
| AGGAGTAAATTTGATTCTGA+GGG | + | chr3_2:31408621-31408640 | Msa0402770:intron | 30.0% | |
| ATGTTCGGTATAAAATTCTC+AGG | + | chr3_2:31408727-31408746 | Msa0402770:intron | 30.0% | |
| !! | GATCTTGATGGATTAAAGAT+AGG | - | chr3_2:31408753-31408772 | None:intergenic | 30.0% |
| TCATCAAACATAAAAAAGGG+GGG | + | chr3_2:31408771-31408790 | Msa0402770:intron | 30.0% | |
| !!! | AATTATTTTAGGGTCTGTTC+GGG | + | chr3_2:31409172-31409191 | Msa0402770:intron | 30.0% |
| TGGAAGAAATTGAAGAATCT+GGG | + | chr3_2:31409239-31409258 | Msa0402770:intron | 30.0% | |
| TATCATTCTCTACAAATGAC+AGG | + | chr3_2:31409437-31409456 | Msa0402770:intron | 30.0% | |
| CAAAGACTAAGAGTCAATTT+GGG | - | chr3_2:31409576-31409595 | None:intergenic | 30.0% | |
| TCAAAGACTAAGAGTCAATT+TGG | - | chr3_2:31409577-31409596 | None:intergenic | 30.0% | |
| ! | AATTGACTCTTAGTCTTTGA+CGG | + | chr3_2:31409577-31409596 | Msa0402770:intron | 30.0% |
| TGAAAAATATGAAATACCGG+AGG | - | chr3_2:31409840-31409859 | None:intergenic | 30.0% | |
| ! | TAAGATTCTGTTTTCAAACC+AGG | + | chr3_2:31410100-31410119 | Msa0402770:three_prime_UTR | 30.0% |
| TGCCTACAACAATGATATAT+TGG | + | chr3_2:31410135-31410154 | Msa0402770:three_prime_UTR | 30.0% | |
| CACCAATATATCATTGTTGT+AGG | - | chr3_2:31410140-31410159 | None:intergenic | 30.0% | |
| CTACAACAATGATATATTGG+TGG | + | chr3_2:31410138-31410157 | Msa0402770:three_prime_UTR | 30.0% | |
| GAATCAGCGAAGTAAAAGAA+TGG | + | chr3_2:31406329-31406348 | Msa0402770:CDS | 35.0% | |
| ACTCCCATTATCACCAATTA+GGG | + | chr3_2:31406532-31406551 | Msa0402770:intron | 35.0% | |
| ! | CTAACCCTAATTGGTGATAA+TGG | - | chr3_2:31406539-31406558 | None:intergenic | 35.0% |
| CATTATCACCAATTAGGGTT+AGG | + | chr3_2:31406537-31406556 | Msa0402770:intron | 35.0% | |
| AGATACTGAACTTAGTAGGT+GGG | + | chr3_2:31406724-31406743 | Msa0402770:intron | 35.0% | |
| !!! | TTTTAGCTTTCTTGTGGCAA+TGG | + | chr3_2:31406818-31406837 | Msa0402770:intron | 35.0% |
| !! | TTTAGCTTTCTTGTGGCAAT+GGG | + | chr3_2:31406819-31406838 | Msa0402770:intron | 35.0% |
| CAATGGGTGATATTTCATTG+AGG | + | chr3_2:31406835-31406854 | Msa0402770:CDS | 35.0% | |
| GATATTTCATTGAGGAAGAC+CGG | + | chr3_2:31406843-31406862 | Msa0402770:CDS | 35.0% | |
| AACTACAATAATGTGCTCAG+GGG | + | chr3_2:31407201-31407220 | Msa0402770:intron | 35.0% | |
| CGATTCATACTAAACTAGTG+AGG | - | chr3_2:31407262-31407281 | None:intergenic | 35.0% | |
| AGCTACTTCATCTTCCAATT+GGG | - | chr3_2:31407305-31407324 | None:intergenic | 35.0% | |
| GAGCAATTACTTGAATGTGA+TGG | + | chr3_2:31407351-31407370 | Msa0402770:CDS | 35.0% | |
| !! | GGAGTAGGTGTTATTCAATT+TGG | + | chr3_2:31407441-31407460 | Msa0402770:intron | 35.0% |
| GATGTTAGATAAAAGGCTGT+AGG | + | chr3_2:31407517-31407536 | Msa0402770:intron | 35.0% | |
| AAAAAGGACAGAAAAGGAAG+CGG | + | chr3_2:31407570-31407589 | Msa0402770:intron | 35.0% | |
| TTATCCTGTACCCATTAAAC+TGG | + | chr3_2:31407597-31407616 | Msa0402770:intron | 35.0% | |
| ! | AAAACCAGTTTAATGGGTAC+AGG | - | chr3_2:31407604-31407623 | None:intergenic | 35.0% |
| ! | CTGTAATTTTTGTCGGATGA+TGG | + | chr3_2:31407813-31407832 | Msa0402770:intron | 35.0% |
| GTTGTTAGGGTAAAGAAATG+AGG | + | chr3_2:31407970-31407989 | Msa0402770:intron | 35.0% | |
| GAAAACAATTCTGGGTAAAC+TGG | - | chr3_2:31408014-31408033 | None:intergenic | 35.0% | |
| TAGAGAAGCTAAGTAGTTAG+AGG | + | chr3_2:31408047-31408066 | Msa0402770:intron | 35.0% | |
| AGAGAAGCTAAGTAGTTAGA+GGG | + | chr3_2:31408048-31408067 | Msa0402770:intron | 35.0% | |
| GGAGGGTCATGTATATAAAT+AGG | + | chr3_2:31408069-31408088 | Msa0402770:intron | 35.0% | |
| GGATAAATTTGGATGGAAGA+AGG | + | chr3_2:31408090-31408109 | Msa0402770:intron | 35.0% | |
| TTCTATGTGTTCTATCTCAG+CGG | - | chr3_2:31408234-31408253 | None:intergenic | 35.0% | |
| GTCTATCTTATAAATGGGAG+AGG | - | chr3_2:31408327-31408346 | None:intergenic | 35.0% | |
| GAGATTTGGGAATTGGAAAT+TGG | + | chr3_2:31408495-31408514 | Msa0402770:intron | 35.0% | |
| TAAGGAAATGTTGTTCAGTG+GGG | + | chr3_2:31408592-31408611 | Msa0402770:intron | 35.0% | |
| AACCTACATTTGCTCAAGAT+TGG | + | chr3_2:31408653-31408672 | Msa0402770:intron | 35.0% | |
| TATTTCGTAGCATGCAGATT+TGG | - | chr3_2:31408917-31408936 | None:intergenic | 35.0% | |
| AATTTGTCCAATCAAAGGTG+AGG | - | chr3_2:31409084-31409103 | None:intergenic | 35.0% | |
| AGATTATTCAGAATCTCAGC+AGG | + | chr3_2:31409118-31409137 | Msa0402770:intron | 35.0% | |
| AACCACAGTATAGAATCTCA+TGG | + | chr3_2:31409142-31409161 | Msa0402770:intron | 35.0% | |
| TTCCATGAGATTCTATACTG+TGG | - | chr3_2:31409147-31409166 | None:intergenic | 35.0% | |
| GTGGAAGAAATTGAAGAATC+TGG | + | chr3_2:31409238-31409257 | Msa0402770:intron | 35.0% | |
| GAACTCAAAAAATGTACTGG+AGG | + | chr3_2:31409320-31409339 | Msa0402770:intron | 35.0% | |
| TCAAAAAATGTACTGGAGGA+GGG | + | chr3_2:31409324-31409343 | Msa0402770:intron | 35.0% | |
| TTCTCTACAAATGACAGGTT+CGG | + | chr3_2:31409442-31409461 | Msa0402770:intron | 35.0% | |
| !!! | AGAGAGTCAGTTTTTTTTGG+TGG | - | chr3_2:31409485-31409504 | None:intergenic | 35.0% |
| AGTCAATTTGGGAGATTGAA+GGG | - | chr3_2:31409565-31409584 | None:intergenic | 35.0% | |
| ! | CTTCTTAGAGTATCAAGGAT+GGG | - | chr3_2:31409804-31409823 | None:intergenic | 35.0% |
| ! | ACTTCTTAGAGTATCAAGGA+TGG | - | chr3_2:31409805-31409824 | None:intergenic | 35.0% |
| ! | GGTAACTTCTTAGAGTATCA+AGG | - | chr3_2:31409809-31409828 | None:intergenic | 35.0% |
| !!! | CAAAGCACATTTTTTGGGTT+TGG | + | chr3_2:31410074-31410093 | Msa0402770:three_prime_UTR | 35.0% |
| ! | GTGGTTGGAATTTTGTTAGC+CGG | - | chr3_2:31406243-31406262 | None:intergenic | 40.0% |
| TTGATTCTCGAAGTCAGGAT+CGG | - | chr3_2:31406270-31406289 | None:intergenic | 40.0% | |
| TGTGTATTCGAATTCGGGAA+CGG | - | chr3_2:31406386-31406405 | None:intergenic | 40.0% | |
| ! | CTTTAGAGAGAGTAACGAGA+TGG | - | chr3_2:31406432-31406451 | None:intergenic | 40.0% |
| ATCTATATTCTGCGGCTTTG+AGG | - | chr3_2:31406495-31406514 | None:intergenic | 40.0% | |
| ACCTTGGGATCTATATTCTG+CGG | - | chr3_2:31406503-31406522 | None:intergenic | 40.0% | |
| GGGAGTGATTATCTTACCTT+GGG | - | chr3_2:31406518-31406537 | None:intergenic | 40.0% | |
| TGGGAGTGATTATCTTACCT+TGG | - | chr3_2:31406519-31406538 | None:intergenic | 40.0% | |
| CACTCCCATTATCACCAATT+AGG | + | chr3_2:31406531-31406550 | Msa0402770:intron | 40.0% | |
| ACCAATTAGGGTTAGGGTTA+AGG | + | chr3_2:31406544-31406563 | Msa0402770:intron | 40.0% | |
| ACCTTAACCCTAACCCTAAT+TGG | - | chr3_2:31406548-31406567 | None:intergenic | 40.0% | |
| TTAGGGTTAGGGTTAAGGTT+TGG | + | chr3_2:31406549-31406568 | Msa0402770:intron | 40.0% | |
| ! | GATTTTGCATTGTAGCTGCA+AGG | + | chr3_2:31406594-31406613 | Msa0402770:intron | 40.0% |
| TGCAAGGATTAGAGAGATTC+TGG | + | chr3_2:31406610-31406629 | Msa0402770:CDS | 40.0% | |
| ! | AGAGAGATTCTGGAGAATGT+AGG | + | chr3_2:31406620-31406639 | Msa0402770:CDS | 40.0% |
| ! | GATTCTGGAGAATGTAGGTT+TGG | + | chr3_2:31406625-31406644 | Msa0402770:CDS | 40.0% |
| GAGATACTGAACTTAGTAGG+TGG | + | chr3_2:31406723-31406742 | Msa0402770:intron | 40.0% | |
| GAAAAGGGCTAAAGTGCATA+AGG | + | chr3_2:31406875-31406894 | Msa0402770:CDS | 40.0% | |
| ATACTAGAAAGGCTATTGCG+AGG | + | chr3_2:31406919-31406938 | Msa0402770:CDS | 40.0% | |
| ACTACAATAATGTGCTCAGG+GGG | + | chr3_2:31407202-31407221 | Msa0402770:intron | 40.0% | |
| GAGCTACTTCATCTTCCAAT+TGG | - | chr3_2:31407306-31407325 | None:intergenic | 40.0% | |
| ACTTGTATCATGCAAGACTG+TGG | + | chr3_2:31407747-31407766 | Msa0402770:intron | 40.0% | |
| TGAATTGACGATTCCCTTCA+TGG | + | chr3_2:31407945-31407964 | Msa0402770:intron | 40.0% | |
| ACAATTCTGGGTAAACTGGT+TGG | - | chr3_2:31408010-31408029 | None:intergenic | 40.0% | |
| AAGCTAAGTAGTTAGAGGGA+GGG | + | chr3_2:31408052-31408071 | Msa0402770:intron | 40.0% | |
| TGCAGAATTGACTGTTACCA+TGG | + | chr3_2:31408268-31408287 | Msa0402770:intron | 40.0% | |
| !! | ACCATGGTTATCGATTTGAC+AGG | + | chr3_2:31408284-31408303 | Msa0402770:intron | 40.0% |
| !! | CCATGGTTATCGATTTGACA+GGG | + | chr3_2:31408285-31408304 | Msa0402770:intron | 40.0% |
| CTTATAAATGGGAGAGGAAC+AGG | - | chr3_2:31408321-31408340 | None:intergenic | 40.0% | |
| ACAAAAGCCCAGAAGTTTCT+TGG | + | chr3_2:31408374-31408393 | Msa0402770:intron | 40.0% | |
| CAAAAGCCCAGAAGTTTCTT+GGG | + | chr3_2:31408375-31408394 | Msa0402770:intron | 40.0% | |
| AAGGAAATGTTGTTCAGTGG+GGG | + | chr3_2:31408593-31408612 | Msa0402770:intron | 40.0% | |
| AGCCAATCTTGAGCAAATGT+AGG | - | chr3_2:31408658-31408677 | None:intergenic | 40.0% | |
| AAATTGGGGAGTAAACATGC+AGG | + | chr3_2:31409013-31409032 | Msa0402770:intron | 40.0% | |
| GAGAAAAAGGAAGGAGAAAG+TGG | + | chr3_2:31409219-31409238 | Msa0402770:intron | 40.0% | |
| GAAATTGAAGAATCTGGGAG+AGG | + | chr3_2:31409244-31409263 | Msa0402770:intron | 40.0% | |
| TGATAACTCAAAACCCCCTA+CGG | + | chr3_2:31409292-31409311 | Msa0402770:intron | 40.0% | |
| GGGGAACTCAAAAAATGTAC+TGG | + | chr3_2:31409317-31409336 | Msa0402770:intron | 40.0% | |
| CTCAAAAAATGTACTGGAGG+AGG | + | chr3_2:31409323-31409342 | Msa0402770:intron | 40.0% | |
| TCTCTACAAATGACAGGTTC+GGG | + | chr3_2:31409443-31409462 | Msa0402770:intron | 40.0% | |
| !!! | GAGTCAGTTTTTTTTGGTGG+TGG | - | chr3_2:31409482-31409501 | None:intergenic | 40.0% |
| GTCAATTTGGGAGATTGAAG+GGG | - | chr3_2:31409564-31409583 | None:intergenic | 40.0% | |
| GAGTCAATTTGGGAGATTGA+AGG | - | chr3_2:31409566-31409585 | None:intergenic | 40.0% | |
| ! | AATAACATTTGCTGCAGACG+AGG | + | chr3_2:31409688-31409707 | Msa0402770:intron | 40.0% |
| AAACCCTATGGCTAATCTCT+GGG | - | chr3_2:31409734-31409753 | None:intergenic | 40.0% | |
| AAAACCCTATGGCTAATCTC+TGG | - | chr3_2:31409735-31409754 | None:intergenic | 40.0% | |
| !! | AGAGATTAGCCATAGGGTTT+TGG | + | chr3_2:31409734-31409753 | Msa0402770:CDS | 40.0% |
| AAGTTACCAAGATTTGCCTC+CGG | + | chr3_2:31409821-31409840 | Msa0402770:CDS | 40.0% | |
| ! | TTACATTTTGCCCGTGTGTT+TGG | + | chr3_2:31409914-31409933 | Msa0402770:intron | 40.0% |
| TCCTGGATAATCCAAACACA+CGG | - | chr3_2:31409928-31409947 | None:intergenic | 40.0% | |
| GATTATCCAGGATAAAGCTC+TGG | + | chr3_2:31409936-31409955 | Msa0402770:intron | 40.0% | |
| CAAGCAGCTCTTCTAAATGA+GGG | + | chr3_2:31410026-31410045 | Msa0402770:exon | 40.0% | |
| AAGCAGCTCTTCTAAATGAG+GGG | + | chr3_2:31410027-31410046 | Msa0402770:exon | 40.0% | |
| !! | TTGGTGGTTCAGTTGATGAA+TGG | + | chr3_2:31410154-31410173 | Msa0402770:three_prime_UTR | 40.0% |
| AGATCGATCGATCTGTGATG+TGG | - | chr3_2:31406182-31406201 | None:intergenic | 45.0% | |
| TATTTAGCGACGGTGGTGAT+TGG | - | chr3_2:31406211-31406230 | None:intergenic | 45.0% | |
| ! | TGGAATTTTGTTAGCCGGCA+CGG | - | chr3_2:31406238-31406257 | None:intergenic | 45.0% |
| !! | GGACATTGATTCTCGAAGTC+AGG | - | chr3_2:31406275-31406294 | None:intergenic | 45.0% |
| GGAGACTGATGCTTCTTGAT+CGG | - | chr3_2:31406296-31406315 | None:intergenic | 45.0% | |
| TCAGTCTCCACAGAAGTTTC+TGG | + | chr3_2:31406307-31406326 | Msa0402770:CDS | 45.0% | |
| ! | GCTGATTCCAGAAACTTCTG+TGG | - | chr3_2:31406317-31406336 | None:intergenic | 45.0% |
| TCCAAAACCTTCGAAGTTGC+AGG | + | chr3_2:31406355-31406374 | Msa0402770:CDS | 45.0% | |
| ! | ACCTGCAACTTCGAAGGTTT+TGG | - | chr3_2:31406359-31406378 | None:intergenic | 45.0% |
| GTGTATTCGAATTCGGGAAC+GGG | - | chr3_2:31406385-31406404 | None:intergenic | 45.0% | |
| CGTGGTGTGTATTCGAATTC+GGG | - | chr3_2:31406391-31406410 | None:intergenic | 45.0% | |
| GCGTGGTGTGTATTCGAATT+CGG | - | chr3_2:31406392-31406411 | None:intergenic | 45.0% | |
| GCAACAATGTGCCAACTATG+AGG | + | chr3_2:31407396-31407415 | Msa0402770:CDS | 45.0% | |
| !!! | ATTTGTTTTGAGGGGGGAGT+AGG | + | chr3_2:31407426-31407445 | Msa0402770:intron | 45.0% |
| TTTGAGAGCGACGCGAAAAA+TGG | + | chr3_2:31407482-31407501 | Msa0402770:intron | 45.0% | |
| TTGAGAGCGACGCGAAAAAT+GGG | + | chr3_2:31407483-31407502 | Msa0402770:intron | 45.0% | |
| GTGGTAGATACACTGCAATG+TGG | + | chr3_2:31407766-31407785 | Msa0402770:intron | 45.0% | |
| ATTGACGATTCCCTTCATGG+AGG | + | chr3_2:31407948-31407967 | Msa0402770:intron | 45.0% | |
| TTCCCTTCATGGAGGTTGTT+AGG | + | chr3_2:31407956-31407975 | Msa0402770:intron | 45.0% | |
| TCCCTTCATGGAGGTTGTTA+GGG | + | chr3_2:31407957-31407976 | Msa0402770:intron | 45.0% | |
| ACCCTAACAACCTCCATGAA+GGG | - | chr3_2:31407961-31407980 | None:intergenic | 45.0% | |
| TACCCTAACAACCTCCATGA+AGG | - | chr3_2:31407962-31407981 | None:intergenic | 45.0% | |
| GAAGCTAAGTAGTTAGAGGG+AGG | + | chr3_2:31408051-31408070 | Msa0402770:intron | 45.0% | |
| CCCTGTCAAATCGATAACCA+TGG | - | chr3_2:31408288-31408307 | None:intergenic | 45.0% | |
| ACACTGCCCAAGAAACTTCT+GGG | - | chr3_2:31408384-31408403 | None:intergenic | 45.0% | |
| TAACACATGTGGGGTGATGT+GGG | - | chr3_2:31408546-31408565 | None:intergenic | 45.0% | |
| CATTACGCCTCACCTTTGAT+TGG | + | chr3_2:31409074-31409093 | Msa0402770:intron | 45.0% | |
| GGAGGTTTGGAGAAAAAGGA+AGG | + | chr3_2:31409210-31409229 | Msa0402770:intron | 45.0% | |
| ATTGAAGAATCTGGGAGAGG+AGG | + | chr3_2:31409247-31409266 | Msa0402770:intron | 45.0% | |
| TTGAAGAATCTGGGAGAGGA+GGG | + | chr3_2:31409248-31409267 | Msa0402770:intron | 45.0% | |
| !!! | TTTTGAGTTCCCCTACCGTA+GGG | - | chr3_2:31409310-31409329 | None:intergenic | 45.0% |
| !!! | TTTTTGAGTTCCCCTACCGT+AGG | - | chr3_2:31409311-31409330 | None:intergenic | 45.0% |
| ! | AATGTACTGGAGGAGGGTTT+TGG | + | chr3_2:31409330-31409349 | Msa0402770:intron | 45.0% |
| ! | ATGTACTGGAGGAGGGTTTT+GGG | + | chr3_2:31409331-31409350 | Msa0402770:intron | 45.0% |
| CTCTACAAATGACAGGTTCG+GGG | + | chr3_2:31409444-31409463 | Msa0402770:intron | 45.0% | |
| !!! | AGTTTTTTTTGGTGGTGGCC+GGG | - | chr3_2:31409477-31409496 | None:intergenic | 45.0% |
| !!! | CAGTTTTTTTTGGTGGTGGC+CGG | - | chr3_2:31409478-31409497 | None:intergenic | 45.0% |
| AGGAGGGGATTAGAGGAAAA+GGG | - | chr3_2:31409529-31409548 | None:intergenic | 45.0% | |
| ATTTGGGAGATTGAAGGGGA+GGG | - | chr3_2:31409560-31409579 | None:intergenic | 45.0% | |
| AATTTGGGAGATTGAAGGGG+AGG | - | chr3_2:31409561-31409580 | None:intergenic | 45.0% | |
| ! | ATACCCCAGAGATTAGCCAT+AGG | + | chr3_2:31409727-31409746 | Msa0402770:CDS | 45.0% |
| ! | TACCCCAGAGATTAGCCATA+GGG | + | chr3_2:31409728-31409747 | Msa0402770:CDS | 45.0% |
| AACCCTATGGCTAATCTCTG+GGG | - | chr3_2:31409733-31409752 | None:intergenic | 45.0% | |
| CCATGTCAACCAAAACCCTA+TGG | - | chr3_2:31409746-31409765 | None:intergenic | 45.0% | |
| !!! | CCATAGGGTTTTGGTTGACA+TGG | + | chr3_2:31409743-31409762 | Msa0402770:CDS | 45.0% |
| GAAATACCGGAGGCAAATCT+TGG | - | chr3_2:31409830-31409849 | None:intergenic | 45.0% | |
| CCTGGATAATCCAAACACAC+GGG | - | chr3_2:31409927-31409946 | None:intergenic | 45.0% | |
| GCAAGCAGCTCTTCTAAATG+AGG | + | chr3_2:31410025-31410044 | Msa0402770:exon | 45.0% | |
| TCGATCTGTGATGTGGTGGT+TGG | - | chr3_2:31406175-31406194 | None:intergenic | 50.0% | |
| TCGATCGATCTGTGATGTGG+TGG | - | chr3_2:31406179-31406198 | None:intergenic | 50.0% | |
| GCACGGTGGTTATTTAGCGA+CGG | - | chr3_2:31406221-31406240 | None:intergenic | 50.0% | |
| TCGCTAAATAACCACCGTGC+CGG | + | chr3_2:31406221-31406240 | Msa0402770:five_prime_UTR | 50.0% | |
| ! | AATTTTGTTAGCCGGCACGG+TGG | - | chr3_2:31406235-31406254 | None:intergenic | 50.0% |
| GGGTTTACCTGCAACTTCGA+AGG | - | chr3_2:31406365-31406384 | None:intergenic | 50.0% | |
| GCCGCAGAATATAGATCCCA+AGG | + | chr3_2:31406499-31406518 | Msa0402770:CDS | 50.0% | |
| ! | GGAGAATGTAGGTTTGGCTC+AGG | + | chr3_2:31406631-31406650 | Msa0402770:CDS | 50.0% |
| GGAGAGTTTACCGTCCAATG+TGG | + | chr3_2:31406652-31406671 | Msa0402770:CDS | 50.0% | |
| TTCATTGAGGAAGACCGGTG+TGG | + | chr3_2:31406848-31406867 | Msa0402770:CDS | 50.0% | |
| GTGCAGAACACTAGCCCAAT+TGG | + | chr3_2:31407288-31407307 | Msa0402770:intron | 50.0% | |
| AGATGAAGTAGCTCCGTGTG+AGG | + | chr3_2:31407312-31407331 | Msa0402770:CDS | 50.0% | |
| CTTTCCATCTGAGCCTCACA+CGG | - | chr3_2:31407328-31407347 | None:intergenic | 50.0% | |
| GTGAGGCTCAGATGGAAAGT+TGG | + | chr3_2:31407329-31407348 | Msa0402770:CDS | 50.0% | |
| GACACTGCCCAAGAAACTTC+TGG | - | chr3_2:31408385-31408404 | None:intergenic | 50.0% | |
| GTAACACATGTGGGGTGATG+TGG | - | chr3_2:31408547-31408566 | None:intergenic | 50.0% | |
| TTAGGGTCTGTTCGGGAGAT+TGG | + | chr3_2:31409179-31409198 | Msa0402770:intron | 50.0% | |
| GAGGGGAGGTTTGGAGAAAA+AGG | + | chr3_2:31409206-31409225 | Msa0402770:intron | 50.0% | |
| AACTCAAAACCCCCTACGGT+AGG | + | chr3_2:31409296-31409315 | Msa0402770:intron | 50.0% | |
| ACTCAAAACCCCCTACGGTA+GGG | + | chr3_2:31409297-31409316 | Msa0402770:intron | 50.0% | |
| ! | TTTGAGTTCCCCTACCGTAG+GGG | - | chr3_2:31409309-31409328 | None:intergenic | 50.0% |
| !!! | GTTTTTTTTGGTGGTGGCCG+GGG | - | chr3_2:31409476-31409495 | None:intergenic | 50.0% |
| GAGGAGGGGATTAGAGGAAA+AGG | - | chr3_2:31409530-31409549 | None:intergenic | 50.0% | |
| TTTGGGAGATTGAAGGGGAG+GGG | - | chr3_2:31409559-31409578 | None:intergenic | 50.0% | |
| TGGTTGACATGGCTGAGCAT+AGG | + | chr3_2:31409754-31409773 | Msa0402770:CDS | 50.0% | |
| TGACATGGCTGAGCATAGGA+AGG | + | chr3_2:31409758-31409777 | Msa0402770:CDS | 50.0% | |
| CCCGTGTGTTTGGATTATCC+AGG | + | chr3_2:31409924-31409943 | Msa0402770:intron | 50.0% | |
| TTCAAGACGCTTCTCAGCAG+CGG | - | chr3_2:31409997-31410016 | None:intergenic | 50.0% | |
| TAGGCAGCAGTATACAAGCC+TGG | - | chr3_2:31410121-31410140 | None:intergenic | 50.0% | |
| GCGACGGTGGTGATTGGAAA+TGG | - | chr3_2:31406205-31406224 | None:intergenic | 55.0% | |
| CGGTGGTTATTTAGCGACGG+TGG | - | chr3_2:31406218-31406237 | None:intergenic | 55.0% | |
| TCTCGAAGTCAGGATCGGAG+AGG | - | chr3_2:31406265-31406284 | None:intergenic | 55.0% | |
| TGCAAGTGAGAGACACTGCG+TGG | - | chr3_2:31406409-31406428 | None:intergenic | 55.0% | |
| ACCGTCCAATGTGGTTGCGT+CGG | + | chr3_2:31406661-31406680 | Msa0402770:CDS | 55.0% | |
| ATTGAGGAAGACCGGTGTGG+AGG | + | chr3_2:31406851-31406870 | Msa0402770:CDS | 55.0% | |
| AGACCGGTGTGGAGGAGAAA+AGG | + | chr3_2:31406859-31406878 | Msa0402770:CDS | 55.0% | |
| GACCGGTGTGGAGGAGAAAA+GGG | + | chr3_2:31406860-31406879 | Msa0402770:CDS | 55.0% | |
| ! | AGCCCTTTTCTCCTCCACAC+CGG | - | chr3_2:31406865-31406884 | None:intergenic | 55.0% |
| ! | TCAGGGGGACAGAGAGCTTT+TGG | + | chr3_2:31407217-31407236 | Msa0402770:intron | 55.0% |
| GTTGTTCAGTGGGGGTTGCA+AGG | + | chr3_2:31408601-31408620 | Msa0402770:intron | 55.0% | |
| GGTCTGTTCGGGAGATTGGA+GGG | + | chr3_2:31409183-31409202 | Msa0402770:intron | 55.0% | |
| GTCTGTTCGGGAGATTGGAG+GGG | + | chr3_2:31409184-31409203 | Msa0402770:intron | 55.0% | |
| ATCTGGGAGAGGAGGGCTTT+AGG | + | chr3_2:31409255-31409274 | Msa0402770:intron | 55.0% | |
| TCTGGGAGAGGAGGGCTTTA+GGG | + | chr3_2:31409256-31409275 | Msa0402770:intron | 55.0% | |
| CTCAAAACCCCCTACGGTAG+GGG | + | chr3_2:31409298-31409317 | Msa0402770:intron | 55.0% | |
| TTGAGTTCCCCTACCGTAGG+GGG | - | chr3_2:31409308-31409327 | None:intergenic | 55.0% | |
| !!! | TACTGGAGGAGGGTTTTGGG+AGG | + | chr3_2:31409334-31409353 | Msa0402770:intron | 55.0% |
| ACAGGAGAGGAGGGGATTAG+AGG | - | chr3_2:31409536-31409555 | None:intergenic | 55.0% | |
| !! | TCTCTGGGGTATAGCCCACA+CGG | - | chr3_2:31409719-31409738 | None:intergenic | 55.0% |
| AGCATAGGAAGGAGCTGGAG+AGG | + | chr3_2:31409769-31409788 | Msa0402770:CDS | 55.0% | |
| ! | AGGCAGCCAGAGCTTTATCC+TGG | - | chr3_2:31409945-31409964 | None:intergenic | 55.0% |
| GTCAGGATCGGAGAGGTGGT+TGG | - | chr3_2:31406258-31406277 | None:intergenic | 60.0% | |
| CGAAGTCAGGATCGGAGAGG+TGG | - | chr3_2:31406262-31406281 | None:intergenic | 60.0% | |
| GAGACGAGCGGCTTCGTCTT+TGG | - | chr3_2:31406455-31406474 | None:intergenic | 60.0% | |
| ATCACGAGCGACGAGACGAG+CGG | - | chr3_2:31406467-31406486 | None:intergenic | 60.0% | |
| GCCGACGCAACCACATTGGA+CGG | - | chr3_2:31406665-31406684 | None:intergenic | 60.0% | |
| AGCTCCGTGTGAGGCTCAGA+TGG | + | chr3_2:31407321-31407340 | Msa0402770:CDS | 60.0% | |
| GGGTCTGTTCGGGAGATTGG+AGG | + | chr3_2:31409182-31409201 | Msa0402770:intron | 60.0% | |
| TGTTCGGGAGATTGGAGGGG+AGG | + | chr3_2:31409187-31409206 | Msa0402770:intron | 60.0% | |
| GTTCGGGAGATTGGAGGGGA+GGG | + | chr3_2:31409188-31409207 | Msa0402770:intron | 60.0% | |
| TTCGGGAGATTGGAGGGGAG+GGG | + | chr3_2:31409189-31409208 | Msa0402770:intron | 60.0% | |
| ATTGGAGGGGAGGGGAGGTT+TGG | + | chr3_2:31409197-31409216 | Msa0402770:intron | 60.0% | |
| ! | CTGGGAGAGGAGGGCTTTAG+GGG | + | chr3_2:31409257-31409276 | Msa0402770:intron | 60.0% |
| GAGATTGAAGGGGAGGGGAC+AGG | - | chr3_2:31409554-31409573 | None:intergenic | 60.0% | |
| CAGACGAGGCTCAACCGTGT+GGG | + | chr3_2:31409702-31409721 | Msa0402770:intron | 60.0% | |
| GGCTGAGCATAGGAAGGAGC+TGG | + | chr3_2:31409764-31409783 | Msa0402770:CDS | 60.0% | |
| ! | CTGCGCCGACGCAACCACAT+TGG | - | chr3_2:31406669-31406688 | None:intergenic | 65.0% |
| ! | CAATGTGGTTGCGTCGGCGC+AGG | + | chr3_2:31406667-31406686 | Msa0402770:CDS | 65.0% |
| CAGGTTCGGGGTTCGAACCC+CGG | + | chr3_2:31409456-31409475 | Msa0402770:intron | 65.0% | |
| TGAAGGGGAGGGGACAGGAG+AGG | - | chr3_2:31409549-31409568 | None:intergenic | 65.0% | |
| GCAGACGAGGCTCAACCGTG+TGG | + | chr3_2:31409701-31409720 | Msa0402770:intron | 65.0% | |
| GGGAGATTGGAGGGGAGGGG+AGG | + | chr3_2:31409192-31409211 | Msa0402770:intron | 70.0% | |
| GGGAGGGGACAGGAGAGGAG+GGG | - | chr3_2:31409544-31409563 | None:intergenic | 70.0% | |
| GGGGAGGGGACAGGAGAGGA+GGG | - | chr3_2:31409545-31409564 | None:intergenic | 70.0% | |
| AGGGGAGGGGACAGGAGAGG+AGG | - | chr3_2:31409546-31409565 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_2 | gene | 31406129 | 31410296 | 31406129 | ID=Msa0402770;Name=Msa0402770 |
| chr3_2 | mRNA | 31406129 | 31410296 | 31406129 | ID=Msa0402770-mRNA-1;Parent=Msa0402770;Name=Msa0402770-mRNA-1;_AED=0.09;_eAED=0.09;_QI=160|1|1|1|1|1|6|255|285 |
| chr3_2 | exon | 31406129 | 31406520 | 31406129 | ID=Msa0402770-mRNA-1:exon:6261;Parent=Msa0402770-mRNA-1 |
| chr3_2 | exon | 31406609 | 31406741 | 31406609 | ID=Msa0402770-mRNA-1:exon:6262;Parent=Msa0402770-mRNA-1 |
| chr3_2 | exon | 31406824 | 31406958 | 31406824 | ID=Msa0402770-mRNA-1:exon:6263;Parent=Msa0402770-mRNA-1 |
| chr3_2 | exon | 31407294 | 31407417 | 31407294 | ID=Msa0402770-mRNA-1:exon:6264;Parent=Msa0402770-mRNA-1 |
| chr3_2 | exon | 31409705 | 31409842 | 31409705 | ID=Msa0402770-mRNA-1:exon:6265;Parent=Msa0402770-mRNA-1 |
| chr3_2 | exon | 31409946 | 31410296 | 31409946 | ID=Msa0402770-mRNA-1:exon:6266;Parent=Msa0402770-mRNA-1 |
| chr3_2 | five_prime_UTR | 31406129 | 31406288 | 31406129 | ID=Msa0402770-mRNA-1:five_prime_utr;Parent=Msa0402770-mRNA-1 |
| chr3_2 | CDS | 31406289 | 31406520 | 31406289 | ID=Msa0402770-mRNA-1:cds;Parent=Msa0402770-mRNA-1 |
| chr3_2 | CDS | 31406609 | 31406741 | 31406609 | ID=Msa0402770-mRNA-1:cds;Parent=Msa0402770-mRNA-1 |
| chr3_2 | CDS | 31406824 | 31406958 | 31406824 | ID=Msa0402770-mRNA-1:cds;Parent=Msa0402770-mRNA-1 |
| chr3_2 | CDS | 31407294 | 31407417 | 31407294 | ID=Msa0402770-mRNA-1:cds;Parent=Msa0402770-mRNA-1 |
| chr3_2 | CDS | 31409705 | 31409842 | 31409705 | ID=Msa0402770-mRNA-1:cds;Parent=Msa0402770-mRNA-1 |
| chr3_2 | CDS | 31409946 | 31410041 | 31409946 | ID=Msa0402770-mRNA-1:cds;Parent=Msa0402770-mRNA-1 |
| chr3_2 | three_prime_UTR | 31410042 | 31410296 | 31410042 | ID=Msa0402770-mRNA-1:three_prime_utr;Parent=Msa0402770-mRNA-1 |
| Gene Sequence |
| Protein sequence |
