Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1347390 | XP_003601304.1 | 98.962 | 289 | 3 | 0 | 1 | 289 | 1 | 289 | 0.0 | 584 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1347390 | sp|F4IK01|AUG1_ARATH | 74.468 | 282 | 71 | 1 | 5 | 285 | 13 | 294 | 4.87e-151 | 427 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1347390 | G7J611 | 98.962 | 289 | 3 | 0 | 1 | 289 | 1 | 289 | 0.0 | 584 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0001800 | Msa1347390 | 0.820012 | 8.588038e-53 | -8.615850e-47 |
| Msa0013270 | Msa1347390 | 0.809969 | 1.455083e-50 | -8.615850e-47 |
| Msa0037180 | Msa1347390 | 0.806742 | 7.097351e-50 | -8.615850e-47 |
| Msa0037680 | Msa1347390 | 0.838778 | 2.349551e-57 | -8.615850e-47 |
| Msa0039750 | Msa1347390 | 0.825296 | 5.064746e-54 | -8.615850e-47 |
| Msa0040860 | Msa1347390 | -0.808328 | 3.269132e-50 | -8.615850e-47 |
| Msa0044530 | Msa1347390 | -0.810330 | 1.216319e-50 | -8.615850e-47 |
| Msa0044780 | Msa1347390 | -0.831084 | 2.039177e-55 | -8.615850e-47 |
| Msa0045810 | Msa1347390 | 0.817159 | 3.810257e-52 | -8.615850e-47 |
| Msa0046200 | Msa1347390 | 0.805918 | 1.058603e-49 | -8.615850e-47 |
| Msa0046970 | Msa1347390 | 0.841117 | 5.771912e-58 | -8.615850e-47 |
| Msa0091090 | Msa1347390 | -0.808682 | 2.747214e-50 | -8.615850e-47 |
| Msa0091240 | Msa1347390 | -0.808595 | 2.867187e-50 | -8.615850e-47 |
| Msa0092220 | Msa1347390 | 0.803610 | 3.211187e-49 | -8.615850e-47 |
| Msa0106540 | Msa1347390 | 0.807691 | 4.467100e-50 | -8.615850e-47 |
| Msa1347390 | Msa1361990 | 0.805453 | 1.325121e-49 | -8.615850e-47 |
| Msa1347390 | Msa1365820 | 0.833542 | 5.022968e-56 | -8.615850e-47 |
| Msa1347390 | Msa1368390 | 0.834038 | 3.774865e-56 | -8.615850e-47 |
| Msa1347390 | Msa1375000 | -0.817773 | 2.770917e-52 | -8.615850e-47 |
| Msa1347390 | Msa1382830 | 0.810587 | 1.070279e-50 | -8.615850e-47 |
| Msa1347390 | Msa1387440 | 0.802610 | 5.170817e-49 | -8.615850e-47 |
| Msa1347390 | Msa1391500 | 0.817090 | 3.949349e-52 | -8.615850e-47 |
| Msa1347390 | Msa1398810 | 0.804346 | 2.257127e-49 | -8.615850e-47 |
| Msa1347390 | Msa1402010 | 0.813432 | 2.566719e-51 | -8.615850e-47 |
| Msa1347390 | Msa1405830 | 0.807703 | 4.441499e-50 | -8.615850e-47 |
| Msa1347390 | Msa1406090 | 0.806720 | 7.171649e-50 | -8.615850e-47 |
| Msa1347390 | Msa1407840 | 0.812377 | 4.371467e-51 | -8.615850e-47 |
| Msa1347390 | Msa1413020 | 0.822542 | 2.240343e-53 | -8.615850e-47 |
| Msa1347390 | Msa1413130 | 0.808166 | 3.539338e-50 | -8.615850e-47 |
| Msa1347390 | Msa1436620 | 0.815122 | 1.086855e-51 | -8.615850e-47 |
| Msa1347390 | Msa1437810 | 0.814494 | 1.497140e-51 | -8.615850e-47 |
| Msa1347390 | Msa1454500 | 0.805690 | 1.181958e-49 | -8.615850e-47 |
| Msa1347390 | Msa1457770 | 0.819219 | 1.302763e-52 | -8.615850e-47 |
| Msa1347390 | Msa1458790 | 0.816678 | 4.886760e-52 | -8.615850e-47 |
| Msa0605530 | Msa1347390 | 0.822771 | 1.981532e-53 | -8.615850e-47 |
| Msa0606820 | Msa1347390 | 0.806282 | 8.872128e-50 | -8.615850e-47 |
| Msa0608820 | Msa1347390 | 0.858317 | 8.950955e-63 | -8.615850e-47 |
| Msa0610700 | Msa1347390 | -0.820800 | 5.662954e-53 | -8.615850e-47 |
| Msa0618840 | Msa1347390 | 0.825773 | 3.903643e-54 | -8.615850e-47 |
| Msa0618990 | Msa1347390 | 0.824919 | 6.218429e-54 | -8.615850e-47 |
| Msa0630440 | Msa1347390 | 0.808928 | 2.433571e-50 | -8.615850e-47 |
| Msa0642550 | Msa1347390 | 0.809402 | 1.926510e-50 | -8.615850e-47 |
| Msa0661480 | Msa1347390 | 0.812976 | 3.232893e-51 | -8.615850e-47 |
| Msa0681050 | Msa1347390 | 0.801129 | 1.041632e-48 | -8.615850e-47 |
| Msa0685020 | Msa1347390 | 0.818531 | 1.867112e-52 | -8.615850e-47 |
| Msa0689830 | Msa1347390 | 0.840221 | 9.906060e-58 | -8.615850e-47 |
| Msa0691610 | Msa1347390 | 0.849050 | 4.146600e-60 | -8.615850e-47 |
| Msa0692790 | Msa1347390 | 0.800521 | 1.386466e-48 | -8.615850e-47 |
| Msa0704690 | Msa1347390 | 0.800286 | 1.547923e-48 | -8.615850e-47 |
| Msa0705680 | Msa1347390 | 0.802188 | 6.317020e-49 | -8.615850e-47 |
| Msa0707360 | Msa1347390 | 0.818224 | 2.191424e-52 | -8.615850e-47 |
| Msa0708980 | Msa1347390 | 0.814556 | 1.450801e-51 | -8.615850e-47 |
| Msa0719270 | Msa1347390 | 0.825083 | 5.687339e-54 | -8.615850e-47 |
| Msa0732970 | Msa1347390 | 0.827715 | 1.342091e-54 | -8.615850e-47 |
| Msa0745140 | Msa1347390 | 0.856173 | 3.847437e-62 | -8.615850e-47 |
| Msa0746650 | Msa1347390 | 0.982620 | 1.452444e-155 | -8.615850e-47 |
| Msa0761830 | Msa1347390 | 0.801007 | 1.103339e-48 | -8.615850e-47 |
| Msa0772220 | Msa1347390 | 0.819274 | 1.265871e-52 | -8.615850e-47 |
| Msa0773960 | Msa1347390 | 0.846470 | 2.128815e-59 | -8.615850e-47 |
| Msa0775660 | Msa1347390 | 0.809153 | 2.178239e-50 | -8.615850e-47 |
| Msa0776640 | Msa1347390 | 0.858672 | 7.012750e-63 | -8.615850e-47 |
| Msa0804170 | Msa1347390 | 0.823191 | 1.581916e-53 | -8.615850e-47 |
| Msa0825920 | Msa1347390 | 0.851129 | 1.085056e-60 | -8.615850e-47 |
| Msa0837710 | Msa1347390 | 0.814913 | 1.209456e-51 | -8.615850e-47 |
| Msa0838620 | Msa1347390 | -0.822217 | 2.666449e-53 | -8.615850e-47 |
| Msa0840520 | Msa1347390 | 0.820156 | 7.961300e-53 | -8.615850e-47 |
| Msa0124910 | Msa1347390 | 0.807149 | 5.819599e-50 | -8.615850e-47 |
| Msa0139500 | Msa1347390 | 0.809681 | 1.678001e-50 | -8.615850e-47 |
| Msa0142430 | Msa1347390 | 0.811669 | 6.235700e-51 | -8.615850e-47 |
| Msa0169410 | Msa1347390 | 0.804868 | 1.757093e-49 | -8.615850e-47 |
| Msa0173250 | Msa1347390 | 0.809985 | 1.443539e-50 | -8.615850e-47 |
| Msa0195230 | Msa1347390 | 0.869298 | 3.439122e-66 | -8.615850e-47 |
| Msa0195260 | Msa1347390 | 0.868890 | 4.663874e-66 | -8.615850e-47 |
| Msa0204950 | Msa1347390 | 0.810876 | 9.269491e-51 | -8.615850e-47 |
| Msa0211460 | Msa1347390 | 0.803271 | 3.774664e-49 | -8.615850e-47 |
| Msa0234170 | Msa1347390 | 0.836724 | 7.914211e-57 | -8.615850e-47 |
| Msa1255030 | Msa1347390 | -0.801888 | 7.280931e-49 | -8.615850e-47 |
| Msa1257570 | Msa1347390 | 0.812215 | 4.741960e-51 | -8.615850e-47 |
| Msa1266120 | Msa1347390 | -0.814161 | 1.773700e-51 | -8.615850e-47 |
| Msa1294280 | Msa1347390 | 0.830144 | 3.465485e-55 | -8.615850e-47 |
| Msa1295210 | Msa1347390 | -0.802815 | 4.690588e-49 | -8.615850e-47 |
| Msa1297220 | Msa1347390 | -0.827370 | 1.624612e-54 | -8.615850e-47 |
| Msa1315500 | Msa1347390 | 0.816516 | 5.310839e-52 | -8.615850e-47 |
| Msa1322980 | Msa1347390 | 0.809964 | 1.458273e-50 | -8.615850e-47 |
| Msa1323260 | Msa1347390 | -0.821784 | 3.358635e-53 | -8.615850e-47 |
| Msa1328870 | Msa1347390 | 0.810415 | 1.165646e-50 | -8.615850e-47 |
| Msa1343450 | Msa1347390 | -0.815357 | 9.636414e-52 | -8.615850e-47 |
| Msa0371350 | Msa1347390 | -0.812693 | 3.728291e-51 | -8.615850e-47 |
| Msa0386880 | Msa1347390 | 0.843425 | 1.412801e-58 | -8.615850e-47 |
| Msa0388210 | Msa1347390 | 0.810281 | 1.245971e-50 | -8.615850e-47 |
| Msa0389690 | Msa1347390 | 0.819880 | 9.207499e-53 | -8.615850e-47 |
| Msa0402770 | Msa1347390 | 0.981243 | 4.060261e-152 | -8.615850e-47 |
| Msa0412580 | Msa1347390 | -0.800693 | 1.278551e-48 | -8.615850e-47 |
| Msa0433630 | Msa1347390 | 0.808848 | 2.531218e-50 | -8.615850e-47 |
| Msa0438680 | Msa1347390 | -0.803451 | 3.463940e-49 | -8.615850e-47 |
| Msa0457070 | Msa1347390 | -0.807064 | 6.065113e-50 | -8.615850e-47 |
| Msa0467170 | Msa1347390 | 0.829462 | 5.078373e-55 | -8.615850e-47 |
| Msa0467330 | Msa1347390 | 0.843537 | 1.318629e-58 | -8.615850e-47 |
| Msa0468620 | Msa1347390 | 0.812035 | 5.191218e-51 | -8.615850e-47 |
| Msa0473910 | Msa1347390 | 0.804134 | 2.499000e-49 | -8.615850e-47 |
| Msa0981670 | Msa1347390 | 0.834826 | 2.393895e-56 | -8.615850e-47 |
| Msa0982730 | Msa1347390 | 0.982558 | 2.108519e-155 | -8.615850e-47 |
| Msa1022420 | Msa1347390 | 0.809888 | 1.514732e-50 | -8.615850e-47 |
| Msa1041170 | Msa1347390 | 0.810668 | 1.028043e-50 | -8.615850e-47 |
| Msa1050260 | Msa1347390 | 0.820362 | 7.139010e-53 | -8.615850e-47 |
| Msa1068940 | Msa1347390 | 0.804815 | 1.802642e-49 | -8.615850e-47 |
| Msa1078830 | Msa1347390 | 0.803025 | 4.244442e-49 | -8.615850e-47 |
| Msa1104110 | Msa1347390 | 0.806547 | 7.801519e-50 | -8.615850e-47 |
| Msa0240540 | Msa1347390 | 0.828699 | 7.775624e-55 | -8.615850e-47 |
| Msa0249850 | Msa1347390 | 0.801402 | 9.157487e-49 | -8.615850e-47 |
| Msa0267450 | Msa1347390 | -0.816443 | 5.516910e-52 | -8.615850e-47 |
| Msa0267510 | Msa1347390 | -0.818834 | 1.594100e-52 | -8.615850e-47 |
| Msa0276850 | Msa1347390 | 0.812197 | 4.785667e-51 | -8.615850e-47 |
| Msa0276860 | Msa1347390 | 0.846941 | 1.582742e-59 | -8.615850e-47 |
| Msa0279000 | Msa1347390 | 0.855651 | 5.467513e-62 | -8.615850e-47 |
| Msa0298400 | Msa1347390 | 0.801122 | 1.044968e-48 | -8.615850e-47 |
| Msa0316000 | Msa1347390 | 0.815161 | 1.065309e-51 | -8.615850e-47 |
| Msa0320600 | Msa1347390 | 0.813873 | 2.052859e-51 | -8.615850e-47 |
| Msa0326710 | Msa1347390 | 0.809126 | 2.207429e-50 | -8.615850e-47 |
| Msa1119440 | Msa1347390 | 0.808798 | 2.594893e-50 | -8.615850e-47 |
| Msa1124210 | Msa1347390 | 0.820771 | 5.753046e-53 | -8.615850e-47 |
| Msa1147700 | Msa1347390 | 0.835714 | 1.429140e-56 | -8.615850e-47 |
| Msa1165460 | Msa1347390 | 0.828529 | 8.548714e-55 | -8.615850e-47 |
| Msa1190770 | Msa1347390 | 0.806356 | 8.557868e-50 | -8.615850e-47 |
| Msa1197720 | Msa1347390 | 0.800676 | 1.288673e-48 | -8.615850e-47 |
| Msa1201170 | Msa1347390 | 0.850895 | 1.263333e-60 | -8.615850e-47 |
| Msa1201780 | Msa1347390 | 0.808221 | 3.445494e-50 | -8.615850e-47 |
| Msa1205270 | Msa1347390 | -0.828052 | 1.114048e-54 | -8.615850e-47 |
| Msa1206040 | Msa1347390 | 0.809742 | 1.627757e-50 | -8.615850e-47 |
| Msa0484210 | Msa1347390 | -0.820720 | 5.909808e-53 | -8.615850e-47 |
| Msa0506750 | Msa1347390 | 0.828445 | 8.954046e-55 | -8.615850e-47 |
| Msa0514500 | Msa1347390 | 0.812592 | 3.922608e-51 | -8.615850e-47 |
| Msa0518530 | Msa1347390 | 0.809630 | 1.720604e-50 | -8.615850e-47 |
| Msa0521510 | Msa1347390 | 0.817141 | 3.846091e-52 | -8.615850e-47 |
| Msa0521530 | Msa1347390 | 0.817040 | 4.053233e-52 | -8.615850e-47 |
| Msa0525880 | Msa1347390 | 0.831698 | 1.440029e-55 | -8.615850e-47 |
| Msa0555280 | Msa1347390 | 0.826261 | 2.989780e-54 | -8.615850e-47 |
| Msa0567330 | Msa1347390 | 0.807672 | 4.508951e-50 | -8.615850e-47 |
| Msa0567610 | Msa1347390 | 0.812882 | 3.389564e-51 | -8.615850e-47 |
| Msa0574900 | Msa1347390 | 0.829288 | 5.596582e-55 | -8.615850e-47 |
| Msa0579080 | Msa1347390 | 0.822422 | 2.389331e-53 | -8.615850e-47 |
| Msa0846900 | Msa1347390 | 0.806971 | 6.348059e-50 | -8.615850e-47 |
| Msa0850690 | Msa1347390 | 0.810621 | 1.052251e-50 | -8.615850e-47 |
| Msa0865420 | Msa1347390 | 0.855324 | 6.812016e-62 | -8.615850e-47 |
| Msa0866530 | Msa1347390 | 0.812166 | 4.859463e-51 | -8.615850e-47 |
| Msa0880910 | Msa1347390 | 0.800298 | 1.539012e-48 | -8.615850e-47 |
| Msa0903340 | Msa1347390 | 0.800070 | 1.712338e-48 | -8.615850e-47 |
| Msa0930770 | Msa1347390 | 0.855110 | 7.857027e-62 | -8.615850e-47 |
| Msa0945030 | Msa1347390 | 0.836158 | 1.102254e-56 | -8.615850e-47 |
| Msa0967780 | Msa1347390 | 0.811048 | 8.506305e-51 | -8.615850e-47 |
| Msa0970270 | Msa1347390 | 0.801696 | 7.973042e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1347390 | MtrunA17_Chr3g0118481 | 98.962 | 289 | 3 | 0 | 1 | 289 | 1 | 289 | 0.0 | 584 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1347390 | AT2G41350.1 | 74.733 | 281 | 71 | 0 | 5 | 285 | 13 | 293 | 8.04e-154 | 432 |
| Msa1347390 | AT2G41350.2 | 74.468 | 282 | 71 | 1 | 5 | 285 | 13 | 294 | 4.95e-152 | 427 |
| Msa1347390 | AT2G21980.1 | 79.310 | 58 | 12 | 0 | 228 | 285 | 1 | 58 | 1.16e-24 | 94.4 |
Find 94 sgRNAs with CRISPR-Local
Find 330 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACCTGCAACTTCGAAGGTTT+TGG | 0.267923 | tig0009737:-6607 | Msa1347390:intergenic |
| GAGACGAGCGGCTTCGTCTT+TGG | 0.285848 | tig0009737:-6703 | Msa1347390:intergenic |
| TCAGTCTCCACAGAAGTTTC+TGG | 0.296590 | tig0009737:+6558 | Msa1347390:CDS |
| TGCAAGGATTAGAGAGATTC+TGG | 0.305262 | tig0009737:+6861 | Msa1347390:CDS |
| AGAGATTAGCCATAGGGTTT+TGG | 0.308633 | tig0009737:+9972 | Msa1347390:CDS |
| TGGACCCGGTTTATTTATCT+TGG | 0.314175 | tig0009737:+6372 | None:intergenic |
| TCCAAAACCTTCGAAGTTGC+AGG | 0.358974 | tig0009737:+6606 | Msa1347390:CDS |
| TGCCTACAACAATGATATAT+TGG | 0.367113 | tig0009737:+10374 | Msa1347390:three_prime_UTR |
| GCGTGGTGTGTATTCGAATT+CGG | 0.370925 | tig0009737:-6640 | Msa1347390:intergenic |
| ATCTATATTCTGCGGCTTTG+AGG | 0.378929 | tig0009737:-6743 | Msa1347390:intergenic |
| GAGCTACTTCATCTTCCAAT+TGG | 0.383390 | tig0009737:-7553 | Msa1347390:intergenic |
| TTGAACCAAGATAAATAAAC+CGG | 0.390870 | tig0009737:-6377 | Msa1347390:intergenic |
| TTTAGCTTTCTTGTGGCAAT+GGG | 0.405983 | tig0009737:+7068 | Msa1347390:intron |
| CGTGGTGTGTATTCGAATTC+GGG | 0.408134 | tig0009737:-6639 | Msa1347390:intergenic |
| CGAGGTTAACATATTTGAAA+AGG | 0.410169 | tig0009737:+7186 | Msa1347390:CDS |
| GCGACGGTGGTGATTGGAAA+TGG | 0.413115 | tig0009737:-6453 | Msa1347390:intergenic |
| TATTTAGCGACGGTGGTGAT+TGG | 0.415970 | tig0009737:-6459 | Msa1347390:intergenic |
| AAAACCCTATGGCTAATCTC+TGG | 0.417355 | tig0009737:-9970 | Msa1347390:intergenic |
| TCTTCTCGATTATACTAGAA+AGG | 0.427173 | tig0009737:+7157 | Msa1347390:CDS |
| GTGCAGAACACTAGCCCAAT+TGG | 0.431088 | tig0009737:+7538 | Msa1347390:intron |
| GTGTATTCGAATTCGGGAAC+GGG | 0.431311 | tig0009737:-6633 | Msa1347390:intergenic |
| GATTCTGGAGAATGTAGGTT+TGG | 0.441568 | tig0009737:+6876 | Msa1347390:CDS |
| AGAGAGATTCTGGAGAATGT+AGG | 0.442677 | tig0009737:+6871 | Msa1347390:CDS |
| GAAATACCGGAGGCAAATCT+TGG | 0.443503 | tig0009737:-10065 | Msa1347390:intergenic |
| CAATGTGGTTGCGTCGGCGC+AGG | 0.443838 | tig0009737:+6918 | Msa1347390:CDS |
| AGACCGGTGTGGAGGAGAAA+AGG | 0.446370 | tig0009737:+7108 | Msa1347390:CDS |
| CACCAATATATCATTGTTGT+AGG | 0.454100 | tig0009737:-10376 | Msa1347390:intergenic |
| GGTAACTTCTTAGAGTATCA+AGG | 0.454855 | tig0009737:-10044 | Msa1347390:intergenic |
| TTGGTGGTTCAGTTGATGAA+TGG | 0.466511 | tig0009737:+10393 | Msa1347390:three_prime_UTR |
| AGCTACTTCATCTTCCAATT+GGG | 0.469118 | tig0009737:-7552 | Msa1347390:intergenic |
| GAAAAGGGCTAAAGTGCATA+AGG | 0.474248 | tig0009737:+7124 | Msa1347390:CDS |
| TGTGTATTCGAATTCGGGAA+CGG | 0.481161 | tig0009737:-6634 | Msa1347390:intergenic |
| TAAGAGATACTGAACTTAGT+AGG | 0.497045 | tig0009737:+6971 | Msa1347390:CDS |
| AAACCCTATGGCTAATCTCT+GGG | 0.498715 | tig0009737:-9969 | Msa1347390:intergenic |
| AAATAAACTAACCTCATAGT+TGG | 0.499847 | tig0009737:-7657 | Msa1347390:intergenic |
| GGACATTGATTCTCGAAGTC+AGG | 0.503089 | tig0009737:-6523 | Msa1347390:intergenic |
| GGAGAATGTAGGTTTGGCTC+AGG | 0.504384 | tig0009737:+6882 | Msa1347390:CDS |
| GATTATCCAGGATAAAGCTC+TGG | 0.506748 | tig0009737:+10174 | Msa1347390:intron |
| ACCGTCCAATGTGGTTGCGT+CGG | 0.519517 | tig0009737:+6912 | Msa1347390:CDS |
| GGCTGAGCATAGGAAGGAGC+TGG | 0.522874 | tig0009737:+10002 | Msa1347390:CDS |
| GACCGGTGTGGAGGAGAAAA+GGG | 0.529132 | tig0009737:+7109 | Msa1347390:CDS |
| CTGCGCCGACGCAACCACAT+TGG | 0.532875 | tig0009737:-6917 | Msa1347390:intergenic |
| GCAAGCAGCTCTTCTAAATG+AGG | 0.535611 | tig0009737:+10264 | Msa1347390:CDS |
| AGCTCCGTGTGAGGCTCAGA+TGG | 0.536186 | tig0009737:+7571 | Msa1347390:CDS |
| GATATTTCATTGAGGAAGAC+CGG | 0.541804 | tig0009737:+7092 | Msa1347390:CDS |
| GTCAGGATCGGAGAGGTGGT+TGG | 0.543430 | tig0009737:-6506 | Msa1347390:intergenic |
| GCAACAATGTGCCAACTATG+AGG | 0.550825 | tig0009737:+7646 | Msa1347390:CDS |
| CTTCTTAGAGTATCAAGGAT+GGG | 0.552403 | tig0009737:-10039 | Msa1347390:intergenic |
| TAGGCAGCAGTATACAAGCC+TGG | 0.553223 | tig0009737:-10357 | Msa1347390:intergenic |
| TACCCCAGAGATTAGCCATA+GGG | 0.553381 | tig0009737:+9966 | Msa1347390:CDS |
| GGGTTTACCTGCAACTTCGA+AGG | 0.554455 | tig0009737:-6613 | Msa1347390:intergenic |
| GTGAGGCTCAGATGGAAAGT+TGG | 0.555194 | tig0009737:+7579 | Msa1347390:CDS |
| CAAGCAGCTCTTCTAAATGA+GGG | 0.558176 | tig0009737:+10265 | Msa1347390:CDS |
| AGCATAGGAAGGAGCTGGAG+AGG | 0.563485 | tig0009737:+10007 | Msa1347390:CDS |
| GAATCAGCGAAGTAAAAGAA+TGG | 0.564127 | tig0009737:+6580 | Msa1347390:CDS |
| CCATGTCAACCAAAACCCTA+TGG | 0.565389 | tig0009737:-9981 | Msa1347390:intergenic |
| TCGATCTGTGATGTGGTGGT+TGG | 0.568177 | tig0009737:-6423 | Msa1347390:intergenic |
| ACCTTGGGATCTATATTCTG+CGG | 0.568417 | tig0009737:-6751 | Msa1347390:intergenic |
| CTACAACAATGATATATTGG+TGG | 0.574874 | tig0009737:+10377 | Msa1347390:three_prime_UTR |
| TGGTTGACATGGCTGAGCAT+AGG | 0.579448 | tig0009737:+9992 | Msa1347390:CDS |
| GCAGACGAGGCTCAACCGTG+TGG | 0.588667 | tig0009737:+9939 | Msa1347390:intron |
| AAGTTACCAAGATTTGCCTC+CGG | 0.589613 | tig0009737:+10059 | Msa1347390:CDS |
| GCCGCAGAATATAGATCCCA+AGG | 0.591800 | tig0009737:+6750 | Msa1347390:CDS |
| CTTTCCATCTGAGCCTCACA+CGG | 0.596528 | tig0009737:-7575 | Msa1347390:intergenic |
| ACTTCTTAGAGTATCAAGGA+TGG | 0.600198 | tig0009737:-10040 | Msa1347390:intergenic |
| GCCGACGCAACCACATTGGA+CGG | 0.603040 | tig0009737:-6913 | Msa1347390:intergenic |
| ATACAATATTTCTATATGAG+TGG | 0.605899 | tig0009737:-10435 | Msa1347390:intergenic |
| TTGATTCTCGAAGTCAGGAT+CGG | 0.606465 | tig0009737:-6518 | Msa1347390:intergenic |
| GGAGACTGATGCTTCTTGAT+CGG | 0.607951 | tig0009737:-6544 | Msa1347390:intergenic |
| ATTGAGGAAGACCGGTGTGG+AGG | 0.608171 | tig0009737:+7100 | Msa1347390:CDS |
| ATACCCCAGAGATTAGCCAT+AGG | 0.609024 | tig0009737:+9965 | Msa1347390:CDS |
| CTTTAGAGAGAGTAACGAGA+TGG | 0.609598 | tig0009737:-6680 | Msa1347390:intergenic |
| GCTGATTCCAGAAACTTCTG+TGG | 0.613746 | tig0009737:-6565 | Msa1347390:intergenic |
| CGAAGTCAGGATCGGAGAGG+TGG | 0.616882 | tig0009737:-6510 | Msa1347390:intergenic |
| TGACATGGCTGAGCATAGGA+AGG | 0.617304 | tig0009737:+9996 | Msa1347390:CDS |
| GCACGGTGGTTATTTAGCGA+CGG | 0.620879 | tig0009737:-6469 | Msa1347390:intergenic |
| CAATGGGTGATATTTCATTG+AGG | 0.630300 | tig0009737:+7084 | Msa1347390:CDS |
| TCGCTAAATAACCACCGTGC+CGG | 0.630367 | tig0009737:+6472 | Msa1347390:five_prime_UTR |
| TTCAAGACGCTTCTCAGCAG+CGG | 0.631015 | tig0009737:-10233 | Msa1347390:intergenic |
| CAGACGAGGCTCAACCGTGT+GGG | 0.631934 | tig0009737:+9940 | Msa1347390:intron |
| ATCACGAGCGACGAGACGAG+CGG | 0.645010 | tig0009737:-6715 | Msa1347390:intergenic |
| GAGCAATTACTTGAATGTGA+TGG | 0.645492 | tig0009737:+7601 | Msa1347390:CDS |
| TTCATTGAGGAAGACCGGTG+TGG | 0.650963 | tig0009737:+7097 | Msa1347390:CDS |
| TCGATCGATCTGTGATGTGG+TGG | 0.654220 | tig0009737:-6427 | Msa1347390:intergenic |
| AACCCTATGGCTAATCTCTG+GGG | 0.660250 | tig0009737:-9968 | Msa1347390:intergenic |
| CGGTGGTTATTTAGCGACGG+TGG | 0.664949 | tig0009737:-6466 | Msa1347390:intergenic |
| ATACTAGAAAGGCTATTGCG+AGG | 0.667502 | tig0009737:+7168 | Msa1347390:CDS |
| GGAGAGTTTACCGTCCAATG+TGG | 0.679839 | tig0009737:+6903 | Msa1347390:CDS |
| AAGCAGCTCTTCTAAATGAG+GGG | 0.682093 | tig0009737:+10266 | Msa1347390:CDS |
| AGATGAAGTAGCTCCGTGTG+AGG | 0.688922 | tig0009737:+7562 | Msa1347390:CDS |
| TCTCTGGGGTATAGCCCACA+CGG | 0.692148 | tig0009737:-9954 | Msa1347380:intergenic |
| AGATCGATCGATCTGTGATG+TGG | 0.700311 | tig0009737:-6430 | Msa1347380:intergenic |
| TCTCGAAGTCAGGATCGGAG+AGG | 0.752484 | tig0009737:-6513 | Msa1347380:intergenic |
| TGCAAGTGAGAGACACTGCG+TGG | 0.791418 | tig0009737:-6657 | Msa1347380:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TATTACTTTTTTATGAAATA+AGG | + | tig0009737:8817-8836 | Msa1347390:intron | 10.0% |
| !!! | TTTTGTTATTTCAATATTCT+AGG | - | tig0009737:7881-7900 | Msa1347390:intergenic | 15.0% |
| !! | GTATATAAATAGGATAAATT+TGG | + | tig0009737:8322-8341 | Msa1347390:intron | 15.0% |
| !! | TATTATTAATGAAATTCTCT+GGG | + | tig0009737:8440-8459 | Msa1347390:intron | 15.0% |
| !!! | AAATGATGATAGTATTTTTT+AGG | + | tig0009737:8694-8713 | Msa1347390:intron | 15.0% |
| !!! | TTTTGTGATAAAATTCATTT+TGG | - | tig0009737:9242-9261 | Msa1347390:intergenic | 15.0% |
| !!! | AATGAATTTTATCACAAAAT+TGG | + | tig0009737:9243-9262 | Msa1347390:intron | 15.0% |
| !!! | ATGAATTTTATCACAAAATT+GGG | + | tig0009737:9244-9263 | Msa1347390:intron | 15.0% |
| !!! | GCATTGTTATTTTTATATAT+TGG | + | tig0009737:9883-9902 | Msa1347390:intron | 15.0% |
| !!! | TAAAGTTTGAATTTTGGAAT+TGG | + | tig0009737:7040-7059 | Msa1347390:intron | 20.0% |
| !!! | AAAGTTTGAATTTTGGAATT+GGG | + | tig0009737:7041-7060 | Msa1347390:intron | 20.0% |
| !! | TTAACATATTTGAAAAGGTA+TGG | + | tig0009737:7191-7210 | Msa1347390:intron | 20.0% |
| !!! | TGGTTTTGAACTAAAAATTT+AGG | + | tig0009737:7211-7230 | Msa1347390:intron | 20.0% |
| !! | GTAAAAATGTAAAATGAATG+TGG | + | tig0009737:7386-7405 | Msa1347390:intron | 20.0% |
| !! | TGAATTTGATGTTAGATAAA+AGG | + | tig0009737:7760-7779 | Msa1347390:intron | 20.0% |
| !!! | ATTTTAGCTGTAATTTTTGT+CGG | + | tig0009737:8051-8070 | Msa1347390:intron | 20.0% |
| !! | TCTTAATTGAAAACAATTCT+GGG | - | tig0009737:8265-8284 | Msa1347390:intergenic | 20.0% |
| !! | TTCTTAATTGAAAACAATTC+TGG | - | tig0009737:8266-8285 | Msa1347390:intergenic | 20.0% |
| !! | ATAAATAGGATAAATTTGGA+TGG | + | tig0009737:8326-8345 | Msa1347390:intron | 20.0% |
| !! | ATTTAGAAAATTTGTGTAGA+AGG | + | tig0009737:8373-8392 | Msa1347390:intron | 20.0% |
| !! | GAGAATTTCATTAATAATAC+TGG | - | tig0009737:8439-8458 | Msa1347390:intergenic | 20.0% |
| !! | GTATTATTAATGAAATTCTC+TGG | + | tig0009737:8439-8458 | Msa1347390:intron | 20.0% |
| !!! | ACTTGAATTTGACAATTTTA+AGG | - | tig0009737:8926-8945 | Msa1347390:intergenic | 20.0% |
| !!! | GATTAATACTTGTTAATGTT+CGG | + | tig0009737:8957-8976 | Msa1347390:intron | 20.0% |
| !! | AAGATCATCAAACATAAAAA+AGG | + | tig0009737:9012-9031 | Msa1347390:intron | 20.0% |
| !! | AGATCATCAAACATAAAAAA+GGG | + | tig0009737:9013-9032 | Msa1347390:intron | 20.0% |
| !!! | TGAATTTTATCACAAAATTG+GGG | + | tig0009737:9245-9264 | Msa1347390:intron | 20.0% |
| !!! | AATTTAATTTGTCCAATCAA+AGG | - | tig0009737:9335-9354 | Msa1347390:intergenic | 20.0% |
| !! | AAGAATATCATAACATAGAT+TGG | - | tig0009737:9618-9637 | Msa1347390:intergenic | 20.0% |
| !!! | TTTTTTATCTTCAATTGCTA+AGG | - | tig0009737:10203-10222 | Msa1347390:intergenic | 20.0% |
| !! | TAGCAATTGAAGATAAAAAA+AGG | + | tig0009737:10203-10222 | Msa1347390:CDS | 20.0% |
| !!! | TAATTTCAAAGCACATTTTT+TGG | + | tig0009737:10307-10326 | Msa1347390:three_prime_UTR | 20.0% |
| !!! | AATTTCAAAGCACATTTTTT+GGG | + | tig0009737:10308-10327 | Msa1347390:three_prime_UTR | 20.0% |
| !!! | ATACAATATTTCTATATGAG+TGG | - | tig0009737:10438-10457 | Msa1347390:intergenic | 20.0% |
| !! | CTGTGTTAAAGTTTGAATTT+TGG | + | tig0009737:7034-7053 | Msa1347390:intron | 25.0% |
| !!! | TTTAGCATTGATACATAACT+TGG | + | tig0009737:7246-7265 | Msa1347390:intron | 25.0% |
| ! | AGCTGTAAAAATTAATACTG+TGG | + | tig0009737:7285-7304 | Msa1347390:intron | 25.0% |
| ! | TAGTCAAATTAAAACTGTCT+AGG | - | tig0009737:7425-7444 | Msa1347390:intergenic | 25.0% |
| ! | AAATAAACTAACCTCATAGT+TGG | - | tig0009737:7660-7679 | Msa1347390:intergenic | 25.0% |
| !!! | AGGTTAGTTTATTTGTTTTG+AGG | + | tig0009737:7666-7685 | Msa1347390:intron | 25.0% |
| !!! | GGTTAGTTTATTTGTTTTGA+GGG | + | tig0009737:7667-7686 | Msa1347390:intron | 25.0% |
| !!! | GTTAGTTTATTTGTTTTGAG+GGG | + | tig0009737:7668-7687 | Msa1347390:intron | 25.0% |
| !!! | TTAGTTTATTTGTTTTGAGG+GGG | + | tig0009737:7669-7688 | Msa1347390:intron | 25.0% |
| ! | CAAGAGATATAGTTAGAAAA+AGG | + | tig0009737:7804-7823 | Msa1347390:intron | 25.0% |
| ! | GGTTTAAAAACCAGTTTAAT+GGG | - | tig0009737:7860-7879 | Msa1347390:intergenic | 25.0% |
| ! | AGGTTTAAAAACCAGTTTAA+TGG | - | tig0009737:7861-7880 | Msa1347390:intergenic | 25.0% |
| ! | TCAGTGTCTATCTTATAAAT+GGG | - | tig0009737:8575-8594 | Msa1347390:intergenic | 25.0% |
| ! | AATCAAGAAAGAATGAGATT+TGG | + | tig0009737:8724-8743 | Msa1347390:intron | 25.0% |
| ! | ATCAAGAAAGAATGAGATTT+GGG | + | tig0009737:8725-8744 | Msa1347390:intron | 25.0% |
| ! | TAATAGATTGTAACACATGT+GGG | - | tig0009737:8799-8818 | Msa1347390:intergenic | 25.0% |
| ! | ATAATAGATTGTAACACATG+TGG | - | tig0009737:8800-8819 | Msa1347390:intergenic | 25.0% |
| !! | TTTATGTTTGATGATCTTGA+TGG | - | tig0009737:9010-9029 | Msa1347390:intergenic | 25.0% |
| ! | GATCATCAAACATAAAAAAG+GGG | + | tig0009737:9014-9033 | Msa1347390:intron | 25.0% |
| ! | ATCATCAAACATAAAAAAGG+GGG | + | tig0009737:9015-9034 | Msa1347390:intron | 25.0% |
| !!! | GTGATAAAATTCATTTTGGT+AGG | - | tig0009737:9238-9257 | Msa1347390:intergenic | 25.0% |
| ! | GGAAATATTAATTGTCTGTT+CGG | + | tig0009737:9409-9428 | Msa1347390:intron | 25.0% |
| ! | GAAATATTAATTGTCTGTTC+GGG | + | tig0009737:9410-9429 | Msa1347390:intron | 25.0% |
| !!! | TTAAGAGAGTCAGTTTTTTT+TGG | - | tig0009737:9726-9745 | Msa1347390:intergenic | 25.0% |
| ! | ACGGATAACATATTATAAAC+TGG | + | tig0009737:9834-9853 | Msa1347390:intron | 25.0% |
| ! | GCATGAAAAATATGAAATAC+CGG | - | tig0009737:10081-10100 | Msa1347390:intergenic | 25.0% |
| !!! | CTTTCTATTTGTTTTAGTTC+TGG | + | tig0009737:10100-10119 | Msa1347390:intron | 25.0% |
| ! | TAACCCTAATTGGTGATAAT+GGG | - | tig0009737:6789-6808 | Msa1347390:intergenic | 30.0% |
| ATTATCACCAATTAGGGTTA+GGG | + | tig0009737:6789-6808 | Msa1347390:intron | 30.0% | |
| TAAGAGATACTGAACTTAGT+AGG | + | tig0009737:6971-6990 | Msa1347390:CDS | 30.0% | |
| TCTTCTCGATTATACTAGAA+AGG | + | tig0009737:7157-7176 | Msa1347390:CDS | 30.0% | |
| CGAGGTTAACATATTTGAAA+AGG | + | tig0009737:7186-7205 | Msa1347390:CDS | 30.0% | |
| TGTAAAATGAATGTGGAACT+TGG | + | tig0009737:7393-7412 | Msa1347390:intron | 30.0% | |
| ! | GAGCACATTATTGTAGTTTT+TGG | - | tig0009737:7448-7467 | Msa1347390:intergenic | 30.0% |
| AAACTACAATAATGTGCTCA+AGG | + | tig0009737:7449-7468 | Msa1347390:intron | 30.0% | |
| AACTACAATAATGTGCTCAA+GGG | + | tig0009737:7450-7469 | Msa1347390:intron | 30.0% | |
| !!! | TAGTTTATTTGTTTTGAGGG+GGG | + | tig0009737:7670-7689 | Msa1347390:intron | 30.0% |
| ATGTTAGATAAAAGGCTGTA+GGG | + | tig0009737:7768-7787 | Msa1347390:intron | 30.0% | |
| AGTTAGAAAAAGGACAGAAA+AGG | + | tig0009737:7814-7833 | Msa1347390:intron | 30.0% | |
| CTTGAACAAGAGAAACAAAA+AGG | + | tig0009737:7905-7924 | Msa1347390:intron | 30.0% | |
| TTTCGTATAGCAATTCAGTT+TGG | - | tig0009737:8089-8108 | Msa1347390:intergenic | 30.0% | |
| AGAAGGATGTTAAGTAAATC+AGG | + | tig0009737:8390-8409 | Msa1347390:intron | 30.0% | |
| !! | ATAATACTGGCTCTATTCAA+TGG | - | tig0009737:8426-8445 | Msa1347390:intergenic | 30.0% |
| TAGAACACATAGAATTGAAG+TGG | + | tig0009737:8483-8502 | Msa1347390:intron | 30.0% | |
| AGAACACATAGAATTGAAGT+GGG | + | tig0009737:8484-8503 | Msa1347390:intron | 30.0% | |
| GTCAGTGTCTATCTTATAAA+TGG | - | tig0009737:8576-8595 | Msa1347390:intergenic | 30.0% | |
| TACTATCATCATTTCGTCAA+TGG | - | tig0009737:8688-8707 | Msa1347390:intergenic | 30.0% | |
| AAAGAATGAGATTTGGGAAT+TGG | + | tig0009737:8731-8750 | Msa1347390:intron | 30.0% | |
| AGATTTGGGAATTGGAAATT+GGG | + | tig0009737:8739-8758 | Msa1347390:intron | 30.0% | |
| GGGTAAAAGATCATAAAGTT+TGG | + | tig0009737:8759-8778 | Msa1347390:intron | 30.0% | |
| AATAGATTGTAACACATGTG+GGG | - | tig0009737:8798-8817 | Msa1347390:intergenic | 30.0% | |
| AATAAGGAAATGTTGTTCAG+TGG | + | tig0009737:8833-8852 | Msa1347390:intron | 30.0% | |
| ATAAGGAAATGTTGTTCAGT+GGG | + | tig0009737:8834-8853 | Msa1347390:intron | 30.0% | |
| AAGGAGTAAATTTGATTCTG+AGG | + | tig0009737:8865-8884 | Msa1347390:intron | 30.0% | |
| AGGAGTAAATTTGATTCTGA+GGG | + | tig0009737:8866-8885 | Msa1347390:intron | 30.0% | |
| ATGTTCGGTATAAAATTCTC+AGG | + | tig0009737:8972-8991 | Msa1347390:intron | 30.0% | |
| !! | GATCTTGATGGATTAAAGAT+AGG | - | tig0009737:8998-9017 | Msa1347390:intergenic | 30.0% |
| TCATCAAACATAAAAAAGGG+GGG | + | tig0009737:9016-9035 | Msa1347390:intron | 30.0% | |
| TGGAAGAAATTGAAGAATCT+GGG | + | tig0009737:9478-9497 | Msa1347390:intron | 30.0% | |
| TATCATTCTCTACAAATGAC+AGG | + | tig0009737:9675-9694 | Msa1347390:intron | 30.0% | |
| CAAAGACTAAGAGTCAATTT+GGG | - | tig0009737:9814-9833 | Msa1347390:intergenic | 30.0% | |
| TCAAAGACTAAGAGTCAATT+TGG | - | tig0009737:9815-9834 | Msa1347390:intergenic | 30.0% | |
| ! | AATTGACTCTTAGTCTTTGA+CGG | + | tig0009737:9815-9834 | Msa1347390:intron | 30.0% |
| TGAAAAATATGAAATACCGG+AGG | - | tig0009737:10078-10097 | Msa1347390:intergenic | 30.0% | |
| ! | TAAGATTCTGTTTTCAAACC+AGG | + | tig0009737:10339-10358 | Msa1347390:three_prime_UTR | 30.0% |
| TGCCTACAACAATGATATAT+TGG | + | tig0009737:10374-10393 | Msa1347390:three_prime_UTR | 30.0% | |
| CACCAATATATCATTGTTGT+AGG | - | tig0009737:10379-10398 | Msa1347390:intergenic | 30.0% | |
| CTACAACAATGATATATTGG+TGG | + | tig0009737:10377-10396 | Msa1347390:three_prime_UTR | 30.0% | |
| GAATCAGCGAAGTAAAAGAA+TGG | + | tig0009737:6580-6599 | Msa1347390:CDS | 35.0% | |
| ACTCCCATTATCACCAATTA+GGG | + | tig0009737:6783-6802 | Msa1347390:intron | 35.0% | |
| ! | CTAACCCTAATTGGTGATAA+TGG | - | tig0009737:6790-6809 | Msa1347390:intergenic | 35.0% |
| CATTATCACCAATTAGGGTT+AGG | + | tig0009737:6788-6807 | Msa1347390:intron | 35.0% | |
| AGATACTGAACTTAGTAGGT+GGG | + | tig0009737:6975-6994 | Msa1347390:intron | 35.0% | |
| !!! | GGGTTTTTTTAGCTTTCTTG+TGG | + | tig0009737:7061-7080 | Msa1347390:intron | 35.0% |
| !!! | TTTTAGCTTTCTTGTGGCAA+TGG | + | tig0009737:7067-7086 | Msa1347390:intron | 35.0% |
| !! | TTTAGCTTTCTTGTGGCAAT+GGG | + | tig0009737:7068-7087 | Msa1347390:intron | 35.0% |
| CAATGGGTGATATTTCATTG+AGG | + | tig0009737:7084-7103 | Msa1347390:CDS | 35.0% | |
| GATATTTCATTGAGGAAGAC+CGG | + | tig0009737:7092-7111 | Msa1347390:CDS | 35.0% | |
| ACTACAATAATGTGCTCAAG+GGG | + | tig0009737:7451-7470 | Msa1347390:intron | 35.0% | |
| CGATTCATACTAAACTAGTG+AGG | - | tig0009737:7512-7531 | Msa1347390:intergenic | 35.0% | |
| AGCTACTTCATCTTCCAATT+GGG | - | tig0009737:7555-7574 | Msa1347390:intergenic | 35.0% | |
| GAGCAATTACTTGAATGTGA+TGG | + | tig0009737:7601-7620 | Msa1347390:CDS | 35.0% | |
| !! | GGAGTAGGTGTTATTCAATT+TGG | + | tig0009737:7691-7710 | Msa1347390:intron | 35.0% |
| GATGTTAGATAAAAGGCTGT+AGG | + | tig0009737:7767-7786 | Msa1347390:intron | 35.0% | |
| AAAAAGGACAGAAAAGGAAG+CGG | + | tig0009737:7820-7839 | Msa1347390:intron | 35.0% | |
| TTATCCTGTACCCATTAAAC+TGG | + | tig0009737:7847-7866 | Msa1347390:intron | 35.0% | |
| ! | AAAACCAGTTTAATGGGTAC+AGG | - | tig0009737:7854-7873 | Msa1347390:intergenic | 35.0% |
| ! | CTGTAATTTTTGTCGGATGA+TGG | + | tig0009737:8058-8077 | Msa1347390:intron | 35.0% |
| TTGTTAGGGTAAAGGAATGA+GGG | + | tig0009737:8214-8233 | Msa1347390:intron | 35.0% | |
| GAAAACAATTCTGGGTAAAC+TGG | - | tig0009737:8257-8276 | Msa1347390:intergenic | 35.0% | |
| TAGAGAAGCTAAGTAGTTAG+AGG | + | tig0009737:8290-8309 | Msa1347390:intron | 35.0% | |
| AGAGAAGCTAAGTAGTTAGA+GGG | + | tig0009737:8291-8310 | Msa1347390:intron | 35.0% | |
| GGAGGGTCATGTATATAAAT+AGG | + | tig0009737:8312-8331 | Msa1347390:intron | 35.0% | |
| GGATAAATTTGGATGGAAGA+AGG | + | tig0009737:8333-8352 | Msa1347390:intron | 35.0% | |
| TTCTATGTGTTCTATCTCAG+CGG | - | tig0009737:8477-8496 | Msa1347390:intergenic | 35.0% | |
| GTCTATCTTATAAATGGGAG+AGG | - | tig0009737:8570-8589 | Msa1347390:intergenic | 35.0% | |
| GAGATTTGGGAATTGGAAAT+TGG | + | tig0009737:8738-8757 | Msa1347390:intron | 35.0% | |
| TAAGGAAATGTTGTTCAGTG+GGG | + | tig0009737:8835-8854 | Msa1347390:intron | 35.0% | |
| AACCTACATTTGCTCAAGAT+TGG | + | tig0009737:8898-8917 | Msa1347390:intron | 35.0% | |
| CATCAAACATAAAAAAGGGG+GGG | + | tig0009737:9017-9036 | Msa1347390:intron | 35.0% | |
| TATTTCGTAGCATGCAGATT+TGG | - | tig0009737:9163-9182 | Msa1347390:intergenic | 35.0% | |
| AATTTGTCCAATCAAAGGTG+AGG | - | tig0009737:9330-9349 | Msa1347390:intergenic | 35.0% | |
| AGATTATTCAGAATCTCAGC+AGG | + | tig0009737:9364-9383 | Msa1347390:intron | 35.0% | |
| AACCACAGTATAGAATCTCA+TGG | + | tig0009737:9388-9407 | Msa1347390:intron | 35.0% | |
| TTCCATGAGATTCTATACTG+TGG | - | tig0009737:9393-9412 | Msa1347390:intergenic | 35.0% | |
| GAGGATTTGGAAAAAAAGGA+AGG | + | tig0009737:9449-9468 | Msa1347390:intron | 35.0% | |
| GAAAAAAAGGAAGGAGAAAG+TGG | + | tig0009737:9458-9477 | Msa1347390:intron | 35.0% | |
| GTGGAAGAAATTGAAGAATC+TGG | + | tig0009737:9477-9496 | Msa1347390:intron | 35.0% | |
| GAACTCAAAAAATGTACTGG+AGG | + | tig0009737:9559-9578 | Msa1347390:intron | 35.0% | |
| TCAAAAAATGTACTGGAGGA+GGG | + | tig0009737:9563-9582 | Msa1347390:intron | 35.0% | |
| TTCTCTACAAATGACAGGTT+CGG | + | tig0009737:9680-9699 | Msa1347390:intron | 35.0% | |
| !!! | AGAGAGTCAGTTTTTTTTGG+TGG | - | tig0009737:9723-9742 | Msa1347390:intergenic | 35.0% |
| AGTCAATTTGGGAGATTGAA+GGG | - | tig0009737:9803-9822 | Msa1347390:intergenic | 35.0% | |
| ! | CTTCTTAGAGTATCAAGGAT+GGG | - | tig0009737:10042-10061 | Msa1347390:intergenic | 35.0% |
| ! | ACTTCTTAGAGTATCAAGGA+TGG | - | tig0009737:10043-10062 | Msa1347390:intergenic | 35.0% |
| ! | GGTAACTTCTTAGAGTATCA+AGG | - | tig0009737:10047-10066 | Msa1347390:intergenic | 35.0% |
| !!! | CAAAGCACATTTTTTGGGTT+TGG | + | tig0009737:10313-10332 | Msa1347390:three_prime_UTR | 35.0% |
| ! | GTGGTTGGAATTTTGTTAGC+CGG | - | tig0009737:6494-6513 | Msa1347390:intergenic | 40.0% |
| TTGATTCTCGAAGTCAGGAT+CGG | - | tig0009737:6521-6540 | Msa1347390:intergenic | 40.0% | |
| TGTGTATTCGAATTCGGGAA+CGG | - | tig0009737:6637-6656 | Msa1347390:intergenic | 40.0% | |
| ! | CTTTAGAGAGAGTAACGAGA+TGG | - | tig0009737:6683-6702 | Msa1347390:intergenic | 40.0% |
| ATCTATATTCTGCGGCTTTG+AGG | - | tig0009737:6746-6765 | Msa1347390:intergenic | 40.0% | |
| ACCTTGGGATCTATATTCTG+CGG | - | tig0009737:6754-6773 | Msa1347390:intergenic | 40.0% | |
| GGGAGTGATTATCTTACCTT+GGG | - | tig0009737:6769-6788 | Msa1347390:intergenic | 40.0% | |
| TGGGAGTGATTATCTTACCT+TGG | - | tig0009737:6770-6789 | Msa1347390:intergenic | 40.0% | |
| CACTCCCATTATCACCAATT+AGG | + | tig0009737:6782-6801 | Msa1347390:intron | 40.0% | |
| ACCAATTAGGGTTAGGGTTA+AGG | + | tig0009737:6795-6814 | Msa1347390:intron | 40.0% | |
| ACCTTAACCCTAACCCTAAT+TGG | - | tig0009737:6799-6818 | Msa1347390:intergenic | 40.0% | |
| TTAGGGTTAGGGTTAAGGTT+TGG | + | tig0009737:6800-6819 | Msa1347390:intron | 40.0% | |
| ! | GATTTTGCATTGTAGCTGCA+AGG | + | tig0009737:6845-6864 | Msa1347390:intron | 40.0% |
| TGCAAGGATTAGAGAGATTC+TGG | + | tig0009737:6861-6880 | Msa1347390:CDS | 40.0% | |
| ! | AGAGAGATTCTGGAGAATGT+AGG | + | tig0009737:6871-6890 | Msa1347390:CDS | 40.0% |
| ! | GATTCTGGAGAATGTAGGTT+TGG | + | tig0009737:6876-6895 | Msa1347390:CDS | 40.0% |
| GAGATACTGAACTTAGTAGG+TGG | + | tig0009737:6974-6993 | Msa1347390:intron | 40.0% | |
| GAAAAGGGCTAAAGTGCATA+AGG | + | tig0009737:7124-7143 | Msa1347390:CDS | 40.0% | |
| ATACTAGAAAGGCTATTGCG+AGG | + | tig0009737:7168-7187 | Msa1347390:CDS | 40.0% | |
| CTACAATAATGTGCTCAAGG+GGG | + | tig0009737:7452-7471 | Msa1347390:intron | 40.0% | |
| GAGCTACTTCATCTTCCAAT+TGG | - | tig0009737:7556-7575 | Msa1347390:intergenic | 40.0% | |
| TTTGAGAGCGACACGAAAAA+TGG | + | tig0009737:7732-7751 | Msa1347390:intron | 40.0% | |
| TTGAGAGCGACACGAAAAAT+GGG | + | tig0009737:7733-7752 | Msa1347390:intron | 40.0% | |
| ACTTGTATCATGCAAGACTG+TGG | + | tig0009737:7992-8011 | Msa1347390:intron | 40.0% | |
| TGAATTGACGATTCCCTTCA+TGG | + | tig0009737:8188-8207 | Msa1347390:intron | 40.0% | |
| GTTGTTAGGGTAAAGGAATG+AGG | + | tig0009737:8213-8232 | Msa1347390:intron | 40.0% | |
| ACAATTCTGGGTAAACTGGT+TGG | - | tig0009737:8253-8272 | Msa1347390:intergenic | 40.0% | |
| AAGCTAAGTAGTTAGAGGGA+GGG | + | tig0009737:8295-8314 | Msa1347390:intron | 40.0% | |
| TGCAGAATTGACTGTTACCA+TGG | + | tig0009737:8511-8530 | Msa1347390:intron | 40.0% | |
| !! | ACCATGGTTATCGATTTGAC+AGG | + | tig0009737:8527-8546 | Msa1347390:intron | 40.0% |
| !! | CCATGGTTATCGATTTGACA+GGG | + | tig0009737:8528-8547 | Msa1347390:intron | 40.0% |
| CTTATAAATGGGAGAGGAAC+AGG | - | tig0009737:8564-8583 | Msa1347390:intergenic | 40.0% | |
| ACAAAAGCCCAGAAGTTTCT+TGG | + | tig0009737:8617-8636 | Msa1347390:intron | 40.0% | |
| CAAAAGCCCAGAAGTTTCTT+GGG | + | tig0009737:8618-8637 | Msa1347390:intron | 40.0% | |
| AAGGAAATGTTGTTCAGTGG+GGG | + | tig0009737:8836-8855 | Msa1347390:intron | 40.0% | |
| AGCCAATCTTGAGCAAATGT+AGG | - | tig0009737:8903-8922 | Msa1347390:intergenic | 40.0% | |
| AAATTGGGGAGTAAACATGC+AGG | + | tig0009737:9259-9278 | Msa1347390:intron | 40.0% | |
| TAATTGTCTGTTCGGGAGAT+TGG | + | tig0009737:9417-9436 | Msa1347390:intron | 40.0% | |
| AGGGGAGGATTTGGAAAAAA+AGG | + | tig0009737:9445-9464 | Msa1347390:intron | 40.0% | |
| GAAATTGAAGAATCTGGGAG+AGG | + | tig0009737:9483-9502 | Msa1347390:intron | 40.0% | |
| TGATAACTCAAAACCCCCTA+CGG | + | tig0009737:9531-9550 | Msa1347390:intron | 40.0% | |
| GGGGAACTCAAAAAATGTAC+TGG | + | tig0009737:9556-9575 | Msa1347390:intron | 40.0% | |
| CTCAAAAAATGTACTGGAGG+AGG | + | tig0009737:9562-9581 | Msa1347390:intron | 40.0% | |
| TCTCTACAAATGACAGGTTC+GGG | + | tig0009737:9681-9700 | Msa1347390:intron | 40.0% | |
| !!! | GAGTCAGTTTTTTTTGGTGG+TGG | - | tig0009737:9720-9739 | Msa1347390:intergenic | 40.0% |
| GTCAATTTGGGAGATTGAAG+GGG | - | tig0009737:9802-9821 | Msa1347390:intergenic | 40.0% | |
| GAGTCAATTTGGGAGATTGA+AGG | - | tig0009737:9804-9823 | Msa1347390:intergenic | 40.0% | |
| ! | AATAACATTTGCTGCAGACG+AGG | + | tig0009737:9926-9945 | Msa1347390:intron | 40.0% |
| AAACCCTATGGCTAATCTCT+GGG | - | tig0009737:9972-9991 | Msa1347390:intergenic | 40.0% | |
| AAAACCCTATGGCTAATCTC+TGG | - | tig0009737:9973-9992 | Msa1347390:intergenic | 40.0% | |
| !! | AGAGATTAGCCATAGGGTTT+TGG | + | tig0009737:9972-9991 | Msa1347390:CDS | 40.0% |
| AAGTTACCAAGATTTGCCTC+CGG | + | tig0009737:10059-10078 | Msa1347390:CDS | 40.0% | |
| ! | TTACATTTTGCCCGTGTGTT+TGG | + | tig0009737:10152-10171 | Msa1347390:intron | 40.0% |
| TCCTGGATAATCCAAACACA+CGG | - | tig0009737:10166-10185 | Msa1347390:intergenic | 40.0% | |
| GATTATCCAGGATAAAGCTC+TGG | + | tig0009737:10174-10193 | Msa1347390:intron | 40.0% | |
| CAAGCAGCTCTTCTAAATGA+GGG | + | tig0009737:10265-10284 | Msa1347390:CDS | 40.0% | |
| AAGCAGCTCTTCTAAATGAG+GGG | + | tig0009737:10266-10285 | Msa1347390:CDS | 40.0% | |
| !! | TTGGTGGTTCAGTTGATGAA+TGG | + | tig0009737:10393-10412 | Msa1347390:three_prime_UTR | 40.0% |
| AGATCGATCGATCTGTGATG+TGG | - | tig0009737:6433-6452 | Msa0653880:intergenic | 45.0% | |
| TATTTAGCGACGGTGGTGAT+TGG | - | tig0009737:6462-6481 | Msa0653880:intergenic | 45.0% | |
| ! | TGGAATTTTGTTAGCCGGCA+CGG | - | tig0009737:6489-6508 | Msa1347390:intergenic | 45.0% |
| !! | GGACATTGATTCTCGAAGTC+AGG | - | tig0009737:6526-6545 | Msa1347390:intergenic | 45.0% |
| GGAGACTGATGCTTCTTGAT+CGG | - | tig0009737:6547-6566 | Msa1347390:intergenic | 45.0% | |
| TCAGTCTCCACAGAAGTTTC+TGG | + | tig0009737:6558-6577 | Msa1347390:CDS | 45.0% | |
| ! | GCTGATTCCAGAAACTTCTG+TGG | - | tig0009737:6568-6587 | Msa1347390:intergenic | 45.0% |
| TCCAAAACCTTCGAAGTTGC+AGG | + | tig0009737:6606-6625 | Msa1347390:CDS | 45.0% | |
| ! | ACCTGCAACTTCGAAGGTTT+TGG | - | tig0009737:6610-6629 | Msa1347390:intergenic | 45.0% |
| GTGTATTCGAATTCGGGAAC+GGG | - | tig0009737:6636-6655 | Msa1347390:intergenic | 45.0% | |
| CGTGGTGTGTATTCGAATTC+GGG | - | tig0009737:6642-6661 | Msa1347390:intergenic | 45.0% | |
| GCGTGGTGTGTATTCGAATT+CGG | - | tig0009737:6643-6662 | Msa1347390:intergenic | 45.0% | |
| GCAACAATGTGCCAACTATG+AGG | + | tig0009737:7646-7665 | Msa1347390:CDS | 45.0% | |
| !!! | ATTTGTTTTGAGGGGGGAGT+AGG | + | tig0009737:7676-7695 | Msa1347390:intron | 45.0% |
| GTGGTAGATACACTGCAATG+TGG | + | tig0009737:8011-8030 | Msa1347390:intron | 45.0% | |
| ATTGACGATTCCCTTCATGG+AGG | + | tig0009737:8191-8210 | Msa1347390:intron | 45.0% | |
| TTCCCTTCATGGAGGTTGTT+AGG | + | tig0009737:8199-8218 | Msa1347390:intron | 45.0% | |
| TCCCTTCATGGAGGTTGTTA+GGG | + | tig0009737:8200-8219 | Msa1347390:intron | 45.0% | |
| ACCCTAACAACCTCCATGAA+GGG | - | tig0009737:8204-8223 | Msa1347390:intergenic | 45.0% | |
| TACCCTAACAACCTCCATGA+AGG | - | tig0009737:8205-8224 | Msa1347390:intergenic | 45.0% | |
| CATGGAGGTTGTTAGGGTAA+AGG | + | tig0009737:8206-8225 | Msa1347390:intron | 45.0% | |
| GAAGCTAAGTAGTTAGAGGG+AGG | + | tig0009737:8294-8313 | Msa1347390:intron | 45.0% | |
| CCCTGTCAAATCGATAACCA+TGG | - | tig0009737:8531-8550 | Msa1347390:intergenic | 45.0% | |
| ACACTGCCCAAGAAACTTCT+GGG | - | tig0009737:8627-8646 | Msa1347390:intergenic | 45.0% | |
| TAACACATGTGGGGTGATGT+GGG | - | tig0009737:8789-8808 | Msa1347390:intergenic | 45.0% | |
| AGGAAATGTTGTTCAGTGGG+GGG | + | tig0009737:8837-8856 | Msa1347390:intron | 45.0% | |
| CATTACGCCTCACCTTTGAT+TGG | + | tig0009737:9320-9339 | Msa1347390:intron | 45.0% | |
| ATTGAAGAATCTGGGAGAGG+AGG | + | tig0009737:9486-9505 | Msa1347390:intron | 45.0% | |
| TTGAAGAATCTGGGAGAGGA+GGG | + | tig0009737:9487-9506 | Msa1347390:intron | 45.0% | |
| !!! | TTTTGAGTTCCCCTACCGTA+GGG | - | tig0009737:9549-9568 | Msa1347390:intergenic | 45.0% |
| !!! | TTTTTGAGTTCCCCTACCGT+AGG | - | tig0009737:9550-9569 | Msa1347390:intergenic | 45.0% |
| ! | AATGTACTGGAGGAGGGTTT+TGG | + | tig0009737:9569-9588 | Msa1347390:intron | 45.0% |
| ! | ATGTACTGGAGGAGGGTTTT+GGG | + | tig0009737:9570-9589 | Msa1347390:intron | 45.0% |
| CTCTACAAATGACAGGTTCG+GGG | + | tig0009737:9682-9701 | Msa1347390:intron | 45.0% | |
| !!! | AGTTTTTTTTGGTGGTGGCC+GGG | - | tig0009737:9715-9734 | Msa1347390:intergenic | 45.0% |
| !!! | CAGTTTTTTTTGGTGGTGGC+CGG | - | tig0009737:9716-9735 | Msa1347390:intergenic | 45.0% |
| AGGAGGGGATTAGAGGAAAA+GGG | - | tig0009737:9767-9786 | Msa1347390:intergenic | 45.0% | |
| ATTTGGGAGATTGAAGGGGA+GGG | - | tig0009737:9798-9817 | Msa1347390:intergenic | 45.0% | |
| AATTTGGGAGATTGAAGGGG+AGG | - | tig0009737:9799-9818 | Msa1347390:intergenic | 45.0% | |
| ! | ATACCCCAGAGATTAGCCAT+AGG | + | tig0009737:9965-9984 | Msa1347390:CDS | 45.0% |
| ! | TACCCCAGAGATTAGCCATA+GGG | + | tig0009737:9966-9985 | Msa1347390:CDS | 45.0% |
| AACCCTATGGCTAATCTCTG+GGG | - | tig0009737:9971-9990 | Msa1347390:intergenic | 45.0% | |
| CCATGTCAACCAAAACCCTA+TGG | - | tig0009737:9984-10003 | Msa1347390:intergenic | 45.0% | |
| !!! | CCATAGGGTTTTGGTTGACA+TGG | + | tig0009737:9981-10000 | Msa1347390:CDS | 45.0% |
| GAAATACCGGAGGCAAATCT+TGG | - | tig0009737:10068-10087 | Msa1347390:intergenic | 45.0% | |
| CCTGGATAATCCAAACACAC+GGG | - | tig0009737:10165-10184 | Msa1347390:intergenic | 45.0% | |
| GCAAGCAGCTCTTCTAAATG+AGG | + | tig0009737:10264-10283 | Msa1347390:CDS | 45.0% | |
| !! | ATTAATAAGTTAAAAAAAAT+TGG | + | tig0009737:10470-10489 | Msa1347390:three_prime_UTR | 5.0% |
| TCGATCTGTGATGTGGTGGT+TGG | - | tig0009737:6426-6445 | Msa0653880:intergenic | 50.0% | |
| TCGATCGATCTGTGATGTGG+TGG | - | tig0009737:6430-6449 | Msa0653880:intergenic | 50.0% | |
| GCACGGTGGTTATTTAGCGA+CGG | - | tig0009737:6472-6491 | Msa0653880:intergenic | 50.0% | |
| TCGCTAAATAACCACCGTGC+CGG | + | tig0009737:6472-6491 | Msa1347390:five_prime_UTR | 50.0% | |
| ! | AATTTTGTTAGCCGGCACGG+TGG | - | tig0009737:6486-6505 | Msa1347390:intergenic | 50.0% |
| GGGTTTACCTGCAACTTCGA+AGG | - | tig0009737:6616-6635 | Msa1347390:intergenic | 50.0% | |
| GCCGCAGAATATAGATCCCA+AGG | + | tig0009737:6750-6769 | Msa1347390:CDS | 50.0% | |
| ! | GGAGAATGTAGGTTTGGCTC+AGG | + | tig0009737:6882-6901 | Msa1347390:CDS | 50.0% |
| GGAGAGTTTACCGTCCAATG+TGG | + | tig0009737:6903-6922 | Msa1347390:CDS | 50.0% | |
| TTCATTGAGGAAGACCGGTG+TGG | + | tig0009737:7097-7116 | Msa1347390:CDS | 50.0% | |
| GTGCAGAACACTAGCCCAAT+TGG | + | tig0009737:7538-7557 | Msa1347390:intron | 50.0% | |
| AGATGAAGTAGCTCCGTGTG+AGG | + | tig0009737:7562-7581 | Msa1347390:CDS | 50.0% | |
| CTTTCCATCTGAGCCTCACA+CGG | - | tig0009737:7578-7597 | Msa1347390:intergenic | 50.0% | |
| GTGAGGCTCAGATGGAAAGT+TGG | + | tig0009737:7579-7598 | Msa1347390:CDS | 50.0% | |
| GACACTGCCCAAGAAACTTC+TGG | - | tig0009737:8628-8647 | Msa1347390:intergenic | 50.0% | |
| GTAACACATGTGGGGTGATG+TGG | - | tig0009737:8790-8809 | Msa1347390:intergenic | 50.0% | |
| TTGTCTGTTCGGGAGATTGG+AGG | + | tig0009737:9420-9439 | Msa1347390:intron | 50.0% | |
| TGTCTGTTCGGGAGATTGGA+GGG | + | tig0009737:9421-9440 | Msa1347390:intron | 50.0% | |
| AACTCAAAACCCCCTACGGT+AGG | + | tig0009737:9535-9554 | Msa1347390:intron | 50.0% | |
| ACTCAAAACCCCCTACGGTA+GGG | + | tig0009737:9536-9555 | Msa1347390:intron | 50.0% | |
| ! | TTTGAGTTCCCCTACCGTAG+GGG | - | tig0009737:9548-9567 | Msa1347390:intergenic | 50.0% |
| !!! | GTTTTTTTTGGTGGTGGCCG+GGG | - | tig0009737:9714-9733 | Msa1347390:intergenic | 50.0% |
| GAGGAGGGGATTAGAGGAAA+AGG | - | tig0009737:9768-9787 | Msa1347390:intergenic | 50.0% | |
| TTTGGGAGATTGAAGGGGAG+GGG | - | tig0009737:9797-9816 | Msa1347390:intergenic | 50.0% | |
| TGGTTGACATGGCTGAGCAT+AGG | + | tig0009737:9992-10011 | Msa1347390:CDS | 50.0% | |
| TGACATGGCTGAGCATAGGA+AGG | + | tig0009737:9996-10015 | Msa1347390:CDS | 50.0% | |
| CCCGTGTGTTTGGATTATCC+AGG | + | tig0009737:10162-10181 | Msa1347390:intron | 50.0% | |
| TTCAAGACGCTTCTCAGCAG+CGG | - | tig0009737:10236-10255 | Msa1347390:intergenic | 50.0% | |
| TAGGCAGCAGTATACAAGCC+TGG | - | tig0009737:10360-10379 | Msa1347390:intergenic | 50.0% | |
| GCGACGGTGGTGATTGGAAA+TGG | - | tig0009737:6456-6475 | Msa0653880:intergenic | 55.0% | |
| CGGTGGTTATTTAGCGACGG+TGG | - | tig0009737:6469-6488 | Msa0653880:intergenic | 55.0% | |
| TCTCGAAGTCAGGATCGGAG+AGG | - | tig0009737:6516-6535 | Msa1347390:intergenic | 55.0% | |
| TGCAAGTGAGAGACACTGCG+TGG | - | tig0009737:6660-6679 | Msa1347390:intergenic | 55.0% | |
| ACCGTCCAATGTGGTTGCGT+CGG | + | tig0009737:6912-6931 | Msa1347390:CDS | 55.0% | |
| ATTGAGGAAGACCGGTGTGG+AGG | + | tig0009737:7100-7119 | Msa1347390:CDS | 55.0% | |
| AGACCGGTGTGGAGGAGAAA+AGG | + | tig0009737:7108-7127 | Msa1347390:CDS | 55.0% | |
| GACCGGTGTGGAGGAGAAAA+GGG | + | tig0009737:7109-7128 | Msa1347390:CDS | 55.0% | |
| ! | AGCCCTTTTCTCCTCCACAC+CGG | - | tig0009737:7114-7133 | Msa1347390:intergenic | 55.0% |
| ! | CAAGGGGGACAGAGAGCTTT+TGG | + | tig0009737:7467-7486 | Msa1347390:intron | 55.0% |
| TGTTCAGTGGGGGGATTGCA+AGG | + | tig0009737:8846-8865 | Msa1347390:intron | 55.0% | |
| GTCTGTTCGGGAGATTGGAG+GGG | + | tig0009737:9422-9441 | Msa1347390:intron | 55.0% | |
| ATCTGGGAGAGGAGGGCTTT+AGG | + | tig0009737:9494-9513 | Msa1347390:intron | 55.0% | |
| TCTGGGAGAGGAGGGCTTTA+GGG | + | tig0009737:9495-9514 | Msa1347390:intron | 55.0% | |
| CTCAAAACCCCCTACGGTAG+GGG | + | tig0009737:9537-9556 | Msa1347390:intron | 55.0% | |
| TTGAGTTCCCCTACCGTAGG+GGG | - | tig0009737:9547-9566 | Msa1347390:intergenic | 55.0% | |
| !!! | TACTGGAGGAGGGTTTTGGG+AGG | + | tig0009737:9573-9592 | Msa1347390:intron | 55.0% |
| ACAGGAGAGGAGGGGATTAG+AGG | - | tig0009737:9774-9793 | Msa1347390:intergenic | 55.0% | |
| !! | TCTCTGGGGTATAGCCCACA+CGG | - | tig0009737:9957-9976 | Msa1347390:intergenic | 55.0% |
| AGCATAGGAAGGAGCTGGAG+AGG | + | tig0009737:10007-10026 | Msa1347390:CDS | 55.0% | |
| ! | AGGCAGCCAGAGCTTTATCC+TGG | - | tig0009737:10183-10202 | Msa1347390:intergenic | 55.0% |
| GTCAGGATCGGAGAGGTGGT+TGG | - | tig0009737:6509-6528 | Msa1347390:intergenic | 60.0% | |
| CGAAGTCAGGATCGGAGAGG+TGG | - | tig0009737:6513-6532 | Msa1347390:intergenic | 60.0% | |
| GAGACGAGCGGCTTCGTCTT+TGG | - | tig0009737:6706-6725 | Msa1347390:intergenic | 60.0% | |
| ATCACGAGCGACGAGACGAG+CGG | - | tig0009737:6718-6737 | Msa1347390:intergenic | 60.0% | |
| GCCGACGCAACCACATTGGA+CGG | - | tig0009737:6916-6935 | Msa1347390:intergenic | 60.0% | |
| AGCTCCGTGTGAGGCTCAGA+TGG | + | tig0009737:7571-7590 | Msa1347390:CDS | 60.0% | |
| TGTTCGGGAGATTGGAGGGG+AGG | + | tig0009737:9425-9444 | Msa1347390:intron | 60.0% | |
| GTTCGGGAGATTGGAGGGGA+GGG | + | tig0009737:9426-9445 | Msa1347390:intron | 60.0% | |
| TTCGGGAGATTGGAGGGGAG+GGG | + | tig0009737:9427-9446 | Msa1347390:intron | 60.0% | |
| TTGGAGGGGAGGGGAGGATT+TGG | + | tig0009737:9436-9455 | Msa1347390:intron | 60.0% | |
| ! | CTGGGAGAGGAGGGCTTTAG+GGG | + | tig0009737:9496-9515 | Msa1347390:intron | 60.0% |
| GAGATTGAAGGGGAGGGGAC+AGG | - | tig0009737:9792-9811 | Msa1347390:intergenic | 60.0% | |
| CAGACGAGGCTCAACCGTGT+GGG | + | tig0009737:9940-9959 | Msa1347390:intron | 60.0% | |
| GGCTGAGCATAGGAAGGAGC+TGG | + | tig0009737:10002-10021 | Msa1347390:CDS | 60.0% | |
| ! | CTGCGCCGACGCAACCACAT+TGG | - | tig0009737:6920-6939 | Msa1347390:intergenic | 65.0% |
| ! | CAATGTGGTTGCGTCGGCGC+AGG | + | tig0009737:6918-6937 | Msa1347390:CDS | 65.0% |
| CAGGTTCGGGGTTCGAACCC+CGG | + | tig0009737:9694-9713 | Msa1347390:intron | 65.0% | |
| TGAAGGGGAGGGGACAGGAG+AGG | - | tig0009737:9787-9806 | Msa1347390:intergenic | 65.0% | |
| GCAGACGAGGCTCAACCGTG+TGG | + | tig0009737:9939-9958 | Msa1347390:intron | 65.0% | |
| GGGAGATTGGAGGGGAGGGG+AGG | + | tig0009737:9430-9449 | Msa1347390:intron | 70.0% | |
| GGGAGGGGACAGGAGAGGAG+GGG | - | tig0009737:9782-9801 | Msa1347390:intergenic | 70.0% | |
| GGGGAGGGGACAGGAGAGGA+GGG | - | tig0009737:9783-9802 | Msa1347390:intergenic | 70.0% | |
| AGGGGAGGGGACAGGAGAGG+AGG | - | tig0009737:9784-9803 | Msa1347390:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0009737 | gene | 6380 | 10541 | 6380 | ID=Msa1347390;Name=Msa1347390 |
| tig0009737 | mRNA | 6380 | 10541 | 6380 | ID=Msa1347390-mRNA-1;Parent=Msa1347390;Name=Msa1347390-mRNA-1;_AED=0.05;_eAED=0.05;_QI=160|1|1|1|1|1|6|250|289 |
| tig0009737 | exon | 6380 | 6771 | 6380 | ID=Msa1347390-mRNA-1:exon:5876;Parent=Msa1347390-mRNA-1 |
| tig0009737 | exon | 6860 | 6992 | 6860 | ID=Msa1347390-mRNA-1:exon:5877;Parent=Msa1347390-mRNA-1 |
| tig0009737 | exon | 7073 | 7207 | 7073 | ID=Msa1347390-mRNA-1:exon:5878;Parent=Msa1347390-mRNA-1 |
| tig0009737 | exon | 7544 | 7667 | 7544 | ID=Msa1347390-mRNA-1:exon:5879;Parent=Msa1347390-mRNA-1 |
| tig0009737 | exon | 9943 | 10080 | 9943 | ID=Msa1347390-mRNA-1:exon:5880;Parent=Msa1347390-mRNA-1 |
| tig0009737 | exon | 10184 | 10541 | 10184 | ID=Msa1347390-mRNA-1:exon:5881;Parent=Msa1347390-mRNA-1 |
| tig0009737 | five_prime_UTR | 6380 | 6539 | 6380 | ID=Msa1347390-mRNA-1:five_prime_utr;Parent=Msa1347390-mRNA-1 |
| tig0009737 | CDS | 6540 | 6771 | 6540 | ID=Msa1347390-mRNA-1:cds;Parent=Msa1347390-mRNA-1 |
| tig0009737 | CDS | 6860 | 6992 | 6860 | ID=Msa1347390-mRNA-1:cds;Parent=Msa1347390-mRNA-1 |
| tig0009737 | CDS | 7073 | 7207 | 7073 | ID=Msa1347390-mRNA-1:cds;Parent=Msa1347390-mRNA-1 |
| tig0009737 | CDS | 7544 | 7667 | 7544 | ID=Msa1347390-mRNA-1:cds;Parent=Msa1347390-mRNA-1 |
| tig0009737 | CDS | 9943 | 10080 | 9943 | ID=Msa1347390-mRNA-1:cds;Parent=Msa1347390-mRNA-1 |
| tig0009737 | CDS | 10184 | 10291 | 10184 | ID=Msa1347390-mRNA-1:cds;Parent=Msa1347390-mRNA-1 |
| tig0009737 | three_prime_UTR | 10292 | 10541 | 10292 | ID=Msa1347390-mRNA-1:three_prime_utr;Parent=Msa1347390-mRNA-1 |
| Gene Sequence |
| Protein sequence |
