AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene026143

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene026143.t1 MTR_1g040195 78.649 459 49 2 1 433 1 436 0.0 723
MS.gene026143.t1 MTR_1g040215 71.150 461 105 3 1 433 1 461 0.0 667
MS.gene026143.t1 MTR_1g040175 70.065 461 107 3 1 433 1 458 0.0 652
MS.gene026143.t1 MTR_1g040320 73.041 434 107 2 1 433 1 425 0.0 650
MS.gene026143.t1 MTR_1g040315 66.083 457 91 4 1 433 1 417 0.0 589
MS.gene026143.t1 MTR_7g114550 55.430 442 163 6 2 412 3 441 6.15e-177 502
MS.gene026143.t1 MTR_7g114560 55.385 455 168 7 5 428 6 456 7.08e-177 502
MS.gene026143.t1 MTR_5g076700 54.846 454 173 5 5 428 6 457 1.32e-176 501
MS.gene026143.t1 MTR_7g114470 54.725 455 173 5 5 428 7 459 2.48e-174 496
MS.gene026143.t1 MTR_1g081660 57.534 438 155 6 4 412 13 448 3.88e-174 495
MS.gene026143.t1 MTR_7g114490 56.148 431 155 6 5 404 6 433 2.48e-170 487
MS.gene026143.t1 MTR_7g114520 53.463 462 168 8 5 428 7 459 4.56e-170 485
MS.gene026143.t1 MTR_0042s0190 61.616 297 86 2 165 433 1 297 1.06e-125 366
MS.gene026143.t1 MTR_7g114510 47.649 319 121 7 147 428 8 317 7.94e-91 278
MS.gene026143.t1 MTR_0042s0190 59.914 232 65 2 230 433 1 232 6.35e-90 272
MS.gene026143.t1 MTR_7g114420 51.119 268 124 5 165 428 1 265 4.79e-89 271
MS.gene026143.t1 MTR_0042s0230 80.272 147 29 0 1 147 1 147 1.13e-82 251
MS.gene026143.t1 MTR_0502s0010 52.066 242 80 4 100 309 1 238 2.21e-80 248
MS.gene026143.t1 MTR_8g039950 90.698 129 12 0 1 129 1 129 8.78e-80 243
MS.gene026143.t1 MTR_3g035000 57.674 215 79 5 199 403 43 255 1.71e-72 230
MS.gene026143.t1 MTR_3g098980 30.607 428 252 8 9 404 14 428 2.68e-68 223
MS.gene026143.t1 MTR_8g096530 32.242 397 229 7 1 365 1 389 2.39e-66 219
MS.gene026143.t1 MTR_7g027175 32.300 387 222 8 12 365 19 398 1.52e-63 211
MS.gene026143.t1 MTR_7g114500 60.667 150 59 0 2 151 3 152 1.92e-63 201
MS.gene026143.t1 MTR_3g051790 59.589 146 59 0 2 147 6 151 2.90e-56 184
MS.gene026143.t1 MTR_3g112180 32.474 388 214 10 19 368 22 399 1.39e-50 177
MS.gene026143.t1 MTR_1g053315 29.571 443 260 15 17 412 26 463 8.19e-50 176
MS.gene026143.t1 MTR_4g055170 28.507 442 265 11 16 411 19 455 1.26e-47 170
MS.gene026143.t1 MTR_3g071320 29.195 435 251 14 17 407 13 434 8.70e-43 156
MS.gene026143.t1 MTR_7g110610 28.029 421 251 14 5 412 1 382 8.72e-43 155
MS.gene026143.t1 MTR_4g007540 28.027 446 255 14 5 404 1 426 3.24e-42 154
MS.gene026143.t1 MTR_2g105330 28.539 445 253 15 5 404 1 425 5.64e-42 154
MS.gene026143.t1 MTR_2g064495 28.315 445 254 15 5 404 1 425 7.26e-41 150
MS.gene026143.t1 MTR_8g075610 29.604 429 251 14 17 408 2 416 1.91e-40 149
MS.gene026143.t1 MTR_7g085930 27.872 470 247 17 9 406 6 455 1.50e-34 134
MS.gene026143.t1 MTR_7g084940 26.440 382 238 8 17 363 24 397 5.14e-33 129
MS.gene026143.t1 MTR_2g015430 27.470 415 260 12 30 408 25 434 1.58e-31 125
MS.gene026143.t1 MTR_7g085990 26.932 427 230 12 9 364 2 417 2.80e-31 125
MS.gene026143.t1 MTR_6g053810 28.079 406 234 15 57 411 64 462 1.63e-30 122
MS.gene026143.t1 MTR_4g088765 72.603 73 20 0 1 73 1 73 2.90e-30 113
MS.gene026143.t1 MTR_4g127650 26.444 450 258 16 17 408 18 452 1.07e-29 120
MS.gene026143.t1 MTR_3g465930 26.174 447 277 14 16 411 17 461 4.27e-29 119
MS.gene026143.t1 MTR_3g465990 25.612 449 273 14 16 411 17 457 3.91e-28 116
MS.gene026143.t1 MTR_7g084910 26.500 400 231 12 1 363 11 384 6.00e-28 115
MS.gene026143.t1 MTR_3g026950 24.757 412 242 12 13 364 6 409 9.46e-28 115
MS.gene026143.t1 MTR_3g465980 25.546 458 262 15 16 411 17 457 8.45e-27 112
MS.gene026143.t1 MTR_4g097090 25.828 453 260 16 16 408 16 452 2.81e-26 110
MS.gene026143.t1 MTR_3g465910 25.778 450 278 16 16 414 17 461 1.06e-25 109
MS.gene026143.t1 MTR_7g086000 25.189 397 224 15 61 396 57 441 8.86e-25 106
MS.gene026143.t1 MTR_3g465880 26.872 454 268 17 16 411 17 464 1.07e-24 106
MS.gene026143.t1 MTR_5g084870 21.719 442 272 15 15 411 9 421 3.54e-22 98.6
MS.gene026143.t1 MTR_3g465950 26.269 335 205 8 16 310 17 349 1.29e-21 97.1
MS.gene026143.t1 MTR_4g022800 25.858 437 235 20 23 402 25 429 1.60e-20 93.6
MS.gene026143.t1 MTR_3g450690 24.533 428 216 13 64 422 72 461 4.03e-20 92.8
MS.gene026143.t1 MTR_0190s0020 26.097 433 234 18 23 402 30 429 9.50e-20 91.3
MS.gene026143.t1 MTR_3g049150 23.114 411 254 11 6 362 1 403 1.16e-19 91.3
MS.gene026143.t1 MTR_5g084850 23.136 389 235 13 15 360 9 376 1.36e-19 90.9
MS.gene026143.t1 MTR_4g022290 25.316 395 235 14 23 375 31 407 2.55e-19 90.1
MS.gene026143.t1 MTR_3g101930 27.809 356 189 17 9 308 7 350 6.83e-19 89.0
MS.gene026143.t1 MTR_5g090830 23.261 460 254 16 7 399 8 435 7.78e-19 89.0
MS.gene026143.t1 MTR_3g088420 24.711 433 250 19 23 409 25 427 3.53e-18 86.7
MS.gene026143.t1 MTR_3g465870 31.053 190 121 4 16 197 19 206 5.69e-18 85.9
MS.gene026143.t1 MTR_4g094828 23.756 442 239 17 24 402 31 437 7.65e-18 85.9
MS.gene026143.t1 MTR_8g467590 24.304 395 234 19 15 360 9 387 8.89e-18 85.5
MS.gene026143.t1 MTR_8g079950 20.557 467 297 13 15 433 9 449 1.87e-17 84.7
MS.gene026143.t1 MTR_5g090880 22.943 401 220 14 61 399 64 437 3.40e-17 84.0
MS.gene026143.t1 MTR_8g079970 22.506 391 242 14 15 360 9 383 4.74e-17 83.2
MS.gene026143.t1 MTR_4g094838 24.471 425 262 16 23 412 29 429 6.45e-17 82.8
MS.gene026143.t1 MTR_4g013050 28.313 166 113 2 12 177 7 166 6.64e-17 82.8
MS.gene026143.t1 MTR_4g022670 25.400 437 236 20 23 402 25 428 7.37e-17 82.8
MS.gene026143.t1 MTR_4g094842 23.778 450 271 19 5 402 6 435 8.72e-17 82.4
MS.gene026143.t1 MTR_4g022720 24.356 427 247 17 23 402 25 422 1.14e-16 82.0
MS.gene026143.t1 MTR_3g101900 24.594 431 238 20 9 373 7 416 2.32e-16 81.3
MS.gene026143.t1 MTR_3g450710 25.441 397 204 16 64 397 65 432 2.40e-16 81.3
MS.gene026143.t1 MTR_7g026860 25.234 428 245 18 23 402 25 425 2.53e-16 80.9
MS.gene026143.t1 MTR_4g094832 26.136 352 198 16 94 402 85 417 2.08e-15 78.2
MS.gene026143.t1 MTR_3g102010 25.301 415 218 16 24 373 32 419 2.34e-15 78.2
MS.gene026143.t1 MTR_5g084900 22.039 363 204 13 64 391 9 327 1.42e-14 75.1
MS.gene026143.t1 MTR_4g022760 25.949 316 175 11 23 295 25 324 1.59e-14 75.5
MS.gene026143.t1 MTR_4g022825 24.888 446 226 21 23 402 25 427 1.36e-13 72.8
MS.gene026143.t1 MTR_7g114417 56.364 55 23 1 89 142 29 83 2.06e-13 65.9
MS.gene026143.t1 MTR_7g114417 65.000 40 14 0 2 41 3 42 8.57e-11 58.5
MS.gene026143.t1 MTR_3g051820 49.333 75 36 2 339 412 1 74 1.25e-12 63.9
MS.gene026143.t1 MTR_2g007880 21.921 406 249 16 17 371 25 413 4.08e-12 68.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene026143.t1 AT5G17540 54.506 466 174 9 1 433 1 461 3.32e-168 480
MS.gene026143.t1 AT3G03480 54.139 447 164 13 5 418 15 453 6.76e-152 439
MS.gene026143.t1 AT5G63560 32.045 440 253 11 1 409 1 425 4.61e-69 225
MS.gene026143.t1 AT5G41040 30.505 436 253 10 9 408 33 454 2.71e-67 221
MS.gene026143.t1 AT5G41040 30.505 436 253 10 9 408 17 438 2.80e-67 221
MS.gene026143.t1 AT3G48720 29.358 436 264 10 1 404 1 424 2.53e-64 213
MS.gene026143.t1 AT1G27620 28.833 437 258 11 10 409 10 430 7.05e-49 172
MS.gene026143.t1 AT3G62160 31.190 420 230 15 5 385 1 400 1.58e-46 166
MS.gene026143.t1 AT2G40230 32.041 387 213 12 17 362 13 390 1.48e-41 152
MS.gene026143.t1 AT1G03390 29.318 440 266 14 7 408 23 455 1.78e-40 150
MS.gene026143.t1 AT2G19070 28.736 435 233 15 35 408 29 447 2.26e-40 150
MS.gene026143.t1 AT1G28680 27.252 444 280 13 16 419 11 451 6.35e-39 146
MS.gene026143.t1 AT5G48930 27.816 435 256 13 17 408 11 430 1.26e-38 145
MS.gene026143.t1 AT5G07080 27.646 463 251 16 7 411 12 448 5.53e-37 140
MS.gene026143.t1 AT5G57840 25.968 439 259 11 17 406 11 432 1.87e-36 139
MS.gene026143.t1 AT3G47170 26.681 476 260 18 7 412 10 466 1.49e-35 137
MS.gene026143.t1 AT1G65450 26.339 448 268 13 1 404 12 441 9.09e-35 134
MS.gene026143.t1 AT1G28680 29.532 342 205 10 16 323 11 350 2.69e-34 132
MS.gene026143.t1 AT2G25150 30.023 443 259 18 15 413 19 454 6.79e-30 121
MS.gene026143.t1 AT2G23510 26.419 458 278 16 1 411 5 450 3.42e-28 116
MS.gene026143.t1 AT1G78990 26.209 393 225 12 62 407 65 439 3.46e-26 110
MS.gene026143.t1 AT1G31490 25.307 407 230 14 6 361 3 386 1.70e-24 105
MS.gene026143.t1 AT5G38130 26.087 391 232 15 23 370 48 424 2.40e-22 99.4
MS.gene026143.t1 AT3G50270 26.471 408 227 17 23 375 30 419 3.48e-20 92.8
MS.gene026143.t1 AT1G32910 24.870 386 212 14 62 397 63 420 3.59e-20 92.8
MS.gene026143.t1 AT3G26040 23.869 398 230 16 15 362 9 383 1.07e-19 91.3
MS.gene026143.t1 AT5G67160 26.531 392 233 16 58 409 50 426 2.61e-19 90.1
MS.gene026143.t1 AT3G50280 26.786 392 228 16 23 369 28 405 1.17e-18 88.2
MS.gene026143.t1 AT1G24430 23.632 457 263 17 12 419 8 427 1.51e-17 84.7
MS.gene026143.t1 AT1G24420 25.253 396 220 15 15 360 11 380 3.10e-17 84.0
MS.gene026143.t1 AT1G24420 25.253 396 220 15 15 360 11 380 3.10e-17 84.0
MS.gene026143.t1 AT4G15390 23.831 449 273 18 3 404 2 428 8.01e-17 82.8
MS.gene026143.t1 AT4G15390 23.831 449 273 18 3 404 2 428 8.01e-17 82.8
MS.gene026143.t1 AT5G16410 25.000 348 200 12 62 362 89 422 1.05e-16 82.4
MS.gene026143.t1 AT5G23970 28.736 174 110 6 13 184 7 168 2.63e-12 68.6

Find 88 sgRNAs with CRISPR-Local

Find 210 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGGTCTTTCCCTTCCATATT+TGG 0.169165 1.2:+24708567 None:intergenic
ATCCATTTGCAGGTAGATTA+AGG 0.198110 1.2:-24708497 MS.gene026143:CDS
TTTGATGGTCTTACAAATTC+AGG 0.203685 1.2:+24708684 None:intergenic
GAATTAATGATAGCATATTT+TGG 0.210015 1.2:+24705461 None:intergenic
GTATTCAGTTGCGGATTTAA+TGG 0.220815 1.2:-24705780 MS.gene026143:CDS
TTTGAAAACGTAACCCTTCT+TGG 0.271683 1.2:+24708619 None:intergenic
GGACTTAGAGATGTTGATTT+TGG 0.272907 1.2:-24705692 MS.gene026143:CDS
CACCCAAGGCACTCATGAAT+TGG 0.305268 1.2:+24706293 None:intergenic
CATTTCATCTAAGGGTATAA+TGG 0.312537 1.2:+24706141 None:intergenic
TTATAAATATGATCCAAATA+TGG 0.321793 1.2:-24708580 MS.gene026143:CDS
TTGGATCATCTTTAGTAGAT+TGG 0.332279 1.2:+24705480 None:intergenic
AAACTAATTGAAAATCCATT+AGG 0.336479 1.2:-24705857 MS.gene026143:CDS
GATGTTAGTTTGAAAGAATT+TGG 0.347283 1.2:-24708405 MS.gene026143:CDS
GCGTTTCCATAGTAACCTTT+TGG 0.359409 1.2:+24705914 None:intergenic
CCTGCAGTTGTAATTGCAAC+AGG 0.365928 1.2:+24705881 None:intergenic
AACTCAAGTGCATACCCTAA+TGG 0.368393 1.2:+24705842 None:intergenic
TGCTAAAGGAGAGGAAGGTT+TGG 0.383515 1.2:-24705582 MS.gene026143:CDS
AACTAATTGAAAATCCATTA+GGG 0.389241 1.2:-24705856 MS.gene026143:CDS
CCGTTGCCAAAAGGTTACTA+TGG 0.390644 1.2:-24705920 MS.gene026143:CDS
TCACTGTGAATAAAAGAGAT+TGG 0.393886 1.2:+24708718 None:intergenic
CATTATACCCTTAGATGAAA+TGG 0.396592 1.2:-24706140 MS.gene026143:CDS
GCGGTGGACCATTTCATCTA+AGG 0.404967 1.2:+24706132 None:intergenic
GTCCAATTCATGAGTGCCTT+GGG 0.406998 1.2:-24706295 MS.gene026143:CDS
TCCATTTGCAGGTAGATTAA+GGG 0.408450 1.2:-24708496 MS.gene026143:CDS
CCTTGGGTGAAATTTCTTGC+GGG 0.426188 1.2:-24706279 MS.gene026143:CDS
TGCGGATTTAATGGTTATCA+AGG 0.430701 1.2:-24705771 MS.gene026143:CDS
AGGTCCTGCTAGGAAACTTA+TGG 0.433584 1.2:-24708472 MS.gene026143:CDS
CCTGTTGCAATTACAACTGC+AGG 0.441218 1.2:-24705881 MS.gene026143:CDS
GATGAGCGATGCGACGGGTT+TGG 0.445821 1.2:-24706317 MS.gene026143:CDS
TATTTATAAAATTGTATCAC+TGG 0.450663 1.2:+24708594 None:intergenic
CACTCCAATCCTTCTTATCC+AGG 0.451699 1.2:-24708307 MS.gene026143:intron
TCCCTTAATCTACCTGCAAA+TGG 0.452547 1.2:+24708495 None:intergenic
GGTCCAATTCATGAGTGCCT+TGG 0.454709 1.2:-24706296 MS.gene026143:CDS
CACTGTGAATAAAAGAGATT+GGG 0.457495 1.2:+24708719 None:intergenic
AATAATATACCTGGATAAGA+AGG 0.480629 1.2:+24708298 None:intergenic
CCGTCGCATCGCTCATCGTA+TGG 0.490462 1.2:+24706323 None:intergenic
TTGATGGTCTTACAAATTCA+GGG 0.497631 1.2:+24708685 None:intergenic
AAACTTATGGTGGATTGCAC+TGG 0.500723 1.2:-24708459 MS.gene026143:CDS
AACTCGTCCAAACAAGGAAA+AGG 0.509960 1.2:+24708366 None:intergenic
CGATGAGTGCATGTTACTCT+TGG 0.517477 1.2:+24706196 None:intergenic
CCATACGATGAGCGATGCGA+CGG 0.520264 1.2:-24706323 MS.gene026143:CDS
TATACCTGGATAAGAAGGAT+TGG 0.520763 1.2:+24708303 None:intergenic
TTGTTTGCCAACTCAAGCCA+TGG 0.521796 1.2:-24705549 MS.gene026143:CDS
GAACAAGTTCCTGACACAAA+AGG 0.522484 1.2:-24706166 MS.gene026143:CDS
GTATATGGAGGACCAGCTAC+AGG 0.522562 1.2:-24705656 MS.gene026143:CDS
GCCTTGGGTGAAATTTCTTG+CGG 0.522636 1.2:-24706280 MS.gene026143:CDS
TGCCATACCGGTGAGATTGA+AGG 0.523692 1.2:+24706247 None:intergenic
ACACCAACTCCTCCTGTAGC+TGG 0.532688 1.2:+24705644 None:intergenic
AAATATGATCCAAATATGGA+AGG 0.544870 1.2:-24708576 MS.gene026143:CDS
GTGTCTGATGTTACACATGC+TGG 0.545058 1.2:-24705713 MS.gene026143:CDS
CGGTGGACCATTTCATCTAA+GGG 0.545372 1.2:+24706133 None:intergenic
TGAGTGCATGTTACTCTTGG+TGG 0.546616 1.2:+24706199 None:intergenic
AACCTCTCCATGGCTTGAGT+TGG 0.550792 1.2:+24705542 None:intergenic
AATATGATCCAAATATGGAA+GGG 0.552554 1.2:-24708575 MS.gene026143:CDS
ATAGAGAGCTTCTAAACGCA+AGG 0.554177 1.2:-24706225 MS.gene026143:CDS
CAGATATAGATGACCAAGAA+GGG 0.559168 1.2:-24708632 MS.gene026143:CDS
AACCTTCAATCTCACCGGTA+TGG 0.559901 1.2:-24706249 MS.gene026143:CDS
CTCTTTAACGAACCTCTCCA+TGG 0.560979 1.2:+24705532 None:intergenic
TCAGATATAGATGACCAAGA+AGG 0.565827 1.2:-24708633 MS.gene026143:CDS
AGAATACATGTATTCAGTTG+CGG 0.568895 1.2:-24705789 MS.gene026143:CDS
GGACCAGCTACAGGAGGAGT+TGG 0.569672 1.2:-24705647 MS.gene026143:CDS
TCCACCATAAGTTTCCTAGC+AGG 0.571714 1.2:+24708468 None:intergenic
CGAAGTGCAGATAACTCGGT+TGG 0.572288 1.2:+24706094 None:intergenic
AGAACGAAGTGCAGATAACT+CGG 0.585268 1.2:+24706090 None:intergenic
GCGGATTTAATGGTTATCAA+GGG 0.587368 1.2:-24705770 MS.gene026143:CDS
AGAAGCTCTCTATGCCATAC+CGG 0.587394 1.2:+24706235 None:intergenic
GAATGAACCTTCAATCTCAC+CGG 0.587572 1.2:-24706254 MS.gene026143:CDS
GATTAAGGGAAGGTCCTGCT+AGG 0.590882 1.2:-24708482 MS.gene026143:CDS
TGCCAACTCAAGCCATGGAG+AGG 0.591210 1.2:-24705544 MS.gene026143:CDS
AAAAGAAACTCGTCCAAACA+AGG 0.593076 1.2:+24708360 None:intergenic
CATACGATGAGCGATGCGAC+GGG 0.594236 1.2:-24706322 MS.gene026143:CDS
ATATAAAAGCTAGCAACACC+AGG 0.611199 1.2:+24705617 None:intergenic
CCCGCAAGAAATTTCACCCA+AGG 0.612458 1.2:+24706279 None:intergenic
TGATGGTCTTACAAATTCAG+GGG 0.623986 1.2:+24708686 None:intergenic
GGAGGAGTTGGTGTTACACC+TGG 0.626042 1.2:-24705635 MS.gene026143:CDS
GCTTGAGTTGGCAAACAAAG+TGG 0.628285 1.2:+24705554 None:intergenic
TCCTGCTAGGAAACTTATGG+TGG 0.635781 1.2:-24708469 MS.gene026143:CDS
TCGTCCAAACAAGGAAAAGG+AGG 0.640474 1.2:+24708369 None:intergenic
ATTCTCACCACGGTAAAATG+TGG 0.643343 1.2:+24705743 None:intergenic
ATGGTGGATTGCACTGGAGA+AGG 0.645652 1.2:-24708453 MS.gene026143:CDS
TAGAGAGCTTCTAAACGCAA+GGG 0.655440 1.2:-24706224 MS.gene026143:CDS
TTTGCAGGTAGATTAAGGGA+AGG 0.667024 1.2:-24708492 MS.gene026143:CDS
TATGGAGGACCAGCTACAGG+AGG 0.683939 1.2:-24705653 MS.gene026143:CDS
ATTACAACCAGATACGGACG+AGG 0.685001 1.2:-24705990 MS.gene026143:intron
TTAATCACATCTGAATAACC+AGG 0.690578 1.2:+24708330 None:intergenic
GTAACACGTCTCAAGTGTGG+TGG 0.692143 1.2:-24706370 MS.gene026143:CDS
CAGGTAACACGTCTCAAGTG+TGG 0.695040 1.2:-24706373 MS.gene026143:CDS
CACTAAGTACATTCTCACCA+CGG 0.698784 1.2:+24705733 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTTAAAAAAAAATTAATATT+CGG + chr1.2:24706453-24706472 None:intergenic 0.0%
!! ACTAGTTATTTAATTAAAAA+AGG - chr1.2:24706151-24706170 MS.gene026143:CDS 10.0%
!! ATCAAAATAAAATTATGATT+AGG - chr1.2:24707411-24707430 MS.gene026143:intron 10.0%
!! TATATAATATATGTAAAGTT+CGG + chr1.2:24706003-24706022 None:intergenic 10.0%
!!! CAAAATTGAATTTTAAATTA+AGG - chr1.2:24707184-24707203 MS.gene026143:intron 10.0%
!! AAAACTCAAAATACAAAATA+TGG + chr1.2:24706838-24706857 None:intergenic 15.0%
!! ATATAATATATGTAAAGTTC+GGG + chr1.2:24706002-24706021 None:intergenic 15.0%
!! TAGTTATTCAAATTTATTAC+TGG - chr1.2:24706295-24706314 MS.gene026143:CDS 15.0%
!! TATATATATATAGAAACAAG+TGG - chr1.2:24707148-24707167 MS.gene026143:intron 15.0%
!! TATTTATAAAATTGTATCAC+TGG + chr1.2:24705583-24705602 None:intergenic 15.0%
!! TTATAAATATGATCCAAATA+TGG - chr1.2:24705594-24705613 MS.gene026143:CDS 15.0%
!! TTGAATATAATTACTTCAAA+TGG + chr1.2:24706996-24707015 None:intergenic 15.0%
!!! AAGATTTGAGTTAATTAATT+AGG + chr1.2:24707343-24707362 None:intergenic 15.0%
!!! TAAGTTTGCTTATATTTTAT+TGG + chr1.2:24706107-24706126 None:intergenic 15.0%
!!! TTAAAATTTAAGATACGATA+CGG + chr1.2:24706902-24706921 None:intergenic 15.0%
!! AAACTAATTGAAAATCCATT+AGG - chr1.2:24708317-24708336 MS.gene026143:CDS 20.0%
!! AAACTCAAAAGCAAAAAAAA+TGG + chr1.2:24706811-24706830 None:intergenic 20.0%
!! AACTAATTGAAAATCCATTA+GGG - chr1.2:24708318-24708337 MS.gene026143:CDS 20.0%
!! ATGATTAGGAAAATACTAAA+TGG - chr1.2:24707425-24707444 MS.gene026143:intron 20.0%
!! GAAAATATCAATAATATACC+TGG + chr1.2:24705888-24705907 None:intergenic 20.0%
!! TATAAATGGATAGCATTTAA+AGG - chr1.2:24706251-24706270 MS.gene026143:CDS 20.0%
!! TATAATATATGTAAAGTTCG+GGG + chr1.2:24706001-24706020 None:intergenic 20.0%
!! TTCTTGTAAAAGAATAAATC+AGG + chr1.2:24707538-24707557 None:intergenic 20.0%
!!! AGTCTTTGATTTTCTTTTTA+TGG - chr1.2:24707679-24707698 MS.gene026143:intron 20.0%
!!! ATATTTTCATGATGTATCAA+AGG - chr1.2:24705900-24705919 MS.gene026143:CDS 20.0%
!!! CTTTTCTAATAATATCAACA+GGG + chr1.2:24705630-24705649 None:intergenic 20.0%
!!! GAATTAATGATAGCATATTT+TGG + chr1.2:24708716-24708735 None:intergenic 20.0%
!!! GTCTTTGATTTTCTTTTTAT+GGG - chr1.2:24707680-24707699 MS.gene026143:intron 20.0%
!!! TAATTATATTCAAAGTGTCT+TGG - chr1.2:24707003-24707022 MS.gene026143:intron 20.0%
!!! TGCTTATATTTTATTGGAAA+GGG + chr1.2:24706101-24706120 None:intergenic 20.0%
!!! TTGCTTATATTTTATTGGAA+AGG + chr1.2:24706102-24706121 None:intergenic 20.0%
! AAATATGATCCAAATATGGA+AGG - chr1.2:24705598-24705617 MS.gene026143:CDS 25.0%
! AATAATATACCTGGATAAGA+AGG + chr1.2:24705879-24705898 None:intergenic 25.0%
! AATATGATCCAAATATGGAA+GGG - chr1.2:24705599-24705618 MS.gene026143:CDS 25.0%
! ACAGACATAGAAAAACAATA+AGG + chr1.2:24706771-24706790 None:intergenic 25.0%
! ATACCTTTCAAAAATGCTAA+AGG - chr1.2:24708578-24708597 MS.gene026143:CDS 25.0%
! CAATCACAAGTGTTTAATTA+TGG - chr1.2:24707370-24707389 MS.gene026143:intron 25.0%
! CCAAATATAATAGAAACATC+AGG + chr1.2:24706551-24706570 None:intergenic 25.0%
! TATCAAACAAGACAAAACAT+CGG + chr1.2:24707607-24707626 None:intergenic 25.0%
! TCGAATAGAATTGCTATAAA+TGG - chr1.2:24706237-24706256 MS.gene026143:CDS 25.0%
! TCGATATTCAAACATTAACT+CGG + chr1.2:24706221-24706240 None:intergenic 25.0%
!! CAGATGTATTTGAAAAGTAT+CGG + chr1.2:24706485-24706504 None:intergenic 25.0%
!! CCTGATGTTTCTATTATATT+TGG - chr1.2:24706548-24706567 MS.gene026143:intron 25.0%
!! GATACTTTTCAAATACATCT+GGG - chr1.2:24706484-24706503 MS.gene026143:intron 25.0%
!! GATGTTAGTTTGAAAGAATT+TGG - chr1.2:24705769-24705788 MS.gene026143:CDS 25.0%
!! GCTTTTCTAATAATATCAAC+AGG + chr1.2:24705631-24705650 None:intergenic 25.0%
!!! AATTTTATTTCATGAGGTGT+TGG + chr1.2:24705517-24705536 None:intergenic 25.0%
!!! ATTGTTTTTCTATGTCTGTT+TGG - chr1.2:24706772-24706791 MS.gene026143:intron 25.0%
!!! CTATTGTTTTATTGTGTGAA+GGG - chr1.2:24706730-24706749 MS.gene026143:intron 25.0%
!!! GAGAGTAATTTTATTTCATG+AGG + chr1.2:24705523-24705542 None:intergenic 25.0%
!!! TCAATCATTTTGAAGTATCT+AGG + chr1.2:24706361-24706380 None:intergenic 25.0%
ACCAACAATCCAATACTTAA+TGG - chr1.2:24707626-24707645 MS.gene026143:intron 30.0%
AGAATACATGTATTCAGTTG+CGG - chr1.2:24708385-24708404 MS.gene026143:CDS 30.0%
ATACTTTCCTGATACGTATT+GGG + chr1.2:24706430-24706449 None:intergenic 30.0%
ATCATATATCTAGGCTTCAT+AGG - chr1.2:24706968-24706987 MS.gene026143:intron 30.0%
CAACAATCCAATACTTAATG+GGG - chr1.2:24707628-24707647 MS.gene026143:intron 30.0%
CACTGTGAATAAAAGAGATT+GGG + chr1.2:24705458-24705477 None:intergenic 30.0%
CATTATACCCTTAGATGAAA+TGG - chr1.2:24708034-24708053 MS.gene026143:intron 30.0%
CCAACAATCCAATACTTAAT+GGG - chr1.2:24707627-24707646 MS.gene026143:intron 30.0%
CCTAGATATATGATACGATA+AGG + chr1.2:24706962-24706981 None:intergenic 30.0%
CCTTATCGTATCATATATCT+AGG - chr1.2:24706959-24706978 MS.gene026143:intron 30.0%
GAAACTTGCATGTTGTTAAA+GGG - chr1.2:24707702-24707721 MS.gene026143:intron 30.0%
GATACGATAAGGATATGATA+TGG + chr1.2:24706951-24706970 None:intergenic 30.0%
TCACTGTGAATAAAAGAGAT+TGG + chr1.2:24705459-24705478 None:intergenic 30.0%
TGGTCACCACAAAAAAAAAT+CGG + chr1.2:24705969-24705988 None:intergenic 30.0%
TGTAAGAGATGTGATATATG+TGG + chr1.2:24707760-24707779 None:intergenic 30.0%
TTAATCACATCTGAATAACC+AGG + chr1.2:24705847-24705866 None:intergenic 30.0%
TTGGATCATCTTTAGTAGAT+TGG + chr1.2:24708697-24708716 None:intergenic 30.0%
TTTCAAAAATGCTAAAGGAG+AGG - chr1.2:24708583-24708602 MS.gene026143:CDS 30.0%
! CATTTCATCTAAGGGTATAA+TGG + chr1.2:24708036-24708055 None:intergenic 30.0%
! CGAATTTGGATTGTTGTTAT+AGG + chr1.2:24708124-24708143 None:intergenic 30.0%
! CGATACTTTTCAAATACATC+TGG - chr1.2:24706483-24706502 MS.gene026143:intron 30.0%
! CTTTTAACCCCATTAAGTAT+TGG + chr1.2:24707638-24707657 None:intergenic 30.0%
! TCTCCTTTAGCATTTTTGAA+AGG + chr1.2:24708584-24708603 None:intergenic 30.0%
! TTGATGGTCTTACAAATTCA+GGG + chr1.2:24705492-24705511 None:intergenic 30.0%
! TTTGATGGTCTTACAAATTC+AGG + chr1.2:24705493-24705512 None:intergenic 30.0%
!! ATTGATTTGTAACTATGTGC+AGG - chr1.2:24707782-24707801 MS.gene026143:intron 30.0%
!! GCTATTGTTTTATTGTGTGA+AGG - chr1.2:24706729-24706748 MS.gene026143:intron 30.0%
!! GTGTTTTATTATCCATTTGC+AGG - chr1.2:24705667-24705686 MS.gene026143:CDS 30.0%
!!! ATAGCACCGATTTTTTTTTG+TGG - chr1.2:24705960-24705979 MS.gene026143:CDS 30.0%
!!! TAGAGATGTTGATTTTGGTT+GGG - chr1.2:24708487-24708506 MS.gene026143:CDS 30.0%
!!! TTAGAGATGTTGATTTTGGT+TGG - chr1.2:24708486-24708505 MS.gene026143:CDS 30.0%
AAAAATGCTAAAGGAGAGGA+AGG - chr1.2:24708587-24708606 MS.gene026143:CDS 35.0%
AAAAGAAACTCGTCCAAACA+AGG + chr1.2:24705817-24705836 None:intergenic 35.0%
AACGAAGCAATGTTATAGCA+TGG + chr1.2:24707056-24707075 None:intergenic 35.0%
AATCGCATTACAACCAGATA+CGG - chr1.2:24708178-24708197 MS.gene026143:intron 35.0%
AGTGTCTTGGACACTAAATA+TGG - chr1.2:24707016-24707035 MS.gene026143:intron 35.0%
ATATAAAAGCTAGCAACACC+AGG + chr1.2:24708560-24708579 None:intergenic 35.0%
ATCCATTTGCAGGTAGATTA+AGG - chr1.2:24705677-24705696 MS.gene026143:CDS 35.0%
CAGATATAGATGACCAAGAA+GGG - chr1.2:24705542-24705561 MS.gene026143:CDS 35.0%
GATACTTTCCTGATACGTAT+TGG + chr1.2:24706431-24706450 None:intergenic 35.0%
GCGGATTTAATGGTTATCAA+GGG - chr1.2:24708404-24708423 MS.gene026143:CDS 35.0%
GGAAACTTGCATGTTGTTAA+AGG - chr1.2:24707701-24707720 MS.gene026143:intron 35.0%
GTATTCAGTTGCGGATTTAA+TGG - chr1.2:24708394-24708413 MS.gene026143:CDS 35.0%
TATACCTGGATAAGAAGGAT+TGG + chr1.2:24705874-24705893 None:intergenic 35.0%
TCAGATATAGATGACCAAGA+AGG - chr1.2:24705541-24705560 MS.gene026143:CDS 35.0%
TCCATTTGCAGGTAGATTAA+GGG - chr1.2:24705678-24705697 MS.gene026143:CDS 35.0%
TGCAGTGATGATTTCGAATT+TGG + chr1.2:24708138-24708157 None:intergenic 35.0%
TGCGGATTTAATGGTTATCA+AGG - chr1.2:24708403-24708422 MS.gene026143:CDS 35.0%
TTAAAAAAGGTTCAGTCCAG+TGG - chr1.2:24706164-24706183 MS.gene026143:CDS 35.0%
TTTCTATGTCTGTTTGGTCT+AGG - chr1.2:24706778-24706797 MS.gene026143:intron 35.0%
TTTGAAAACGTAACCCTTCT+TGG + chr1.2:24705558-24705577 None:intergenic 35.0%
! ATAATGGTTCCTTTTGTGTC+AGG + chr1.2:24708020-24708039 None:intergenic 35.0%
! CAAATACATCTGGGATACAA+GGG - chr1.2:24706493-24706512 MS.gene026143:intron 35.0%
! TCAAATACATCTGGGATACA+AGG - chr1.2:24706492-24706511 MS.gene026143:intron 35.0%
! TGATGGTCTTACAAATTCAG+GGG + chr1.2:24705491-24705510 None:intergenic 35.0%
!! CCCATTAAGTATTGGATTGT+TGG + chr1.2:24707630-24707649 None:intergenic 35.0%
!!! AGAGATGTTGATTTTGGTTG+GGG - chr1.2:24708488-24708507 MS.gene026143:CDS 35.0%
!!! GGACTTAGAGATGTTGATTT+TGG - chr1.2:24708482-24708501 MS.gene026143:CDS 35.0%
!!! TTTTTTGTGGTGACCAGAAT+TGG - chr1.2:24705973-24705992 MS.gene026143:CDS 35.0%
AAATCATCACTGCATGCCTT+TGG - chr1.2:24708144-24708163 MS.gene026143:intron 40.0%
AACTCAAGTGCATACCCTAA+TGG + chr1.2:24708335-24708354 None:intergenic 40.0%
AACTCGTCCAAACAAGGAAA+AGG + chr1.2:24705811-24705830 None:intergenic 40.0%
AAGACAAAACATCGGAGAAG+TGG + chr1.2:24707599-24707618 None:intergenic 40.0%
ACACAGAGACACAAAACAGA+CGG + chr1.2:24706694-24706713 None:intergenic 40.0%
AGAACGAAGTGCAGATAACT+CGG + chr1.2:24708087-24708106 None:intergenic 40.0%
ATAGAGAGCTTCTAAACGCA+AGG - chr1.2:24707949-24707968 MS.gene026143:intron 40.0%
ATCTAGGCTTCATCAGAGAA+TGG + chr1.2:24706345-24706364 None:intergenic 40.0%
ATTCTCACCACGGTAAAATG+TGG + chr1.2:24708434-24708453 None:intergenic 40.0%
CACTAAGTACATTCTCACCA+CGG + chr1.2:24708444-24708463 None:intergenic 40.0%
CTGGTTGTAATGCGATTGTA+CGG + chr1.2:24708175-24708194 None:intergenic 40.0%
GAACAAGTTCCTGACACAAA+AGG - chr1.2:24708008-24708027 MS.gene026143:intron 40.0%
GAATGAACCTTCAATCTCAC+CGG - chr1.2:24707920-24707939 MS.gene026143:intron 40.0%
GATACTTCCCAATACGTATC+AGG - chr1.2:24706420-24706439 MS.gene026143:intron 40.0%
GATGTTGAGTCTAGTGAAAG+AGG + chr1.2:24707096-24707115 None:intergenic 40.0%
TAAACTCTAACCTCATCCAC+TGG + chr1.2:24706183-24706202 None:intergenic 40.0%
TAGAGAGCTTCTAAACGCAA+GGG - chr1.2:24707950-24707969 MS.gene026143:intron 40.0%
TCCCTTAATCTACCTGCAAA+TGG + chr1.2:24705682-24705701 None:intergenic 40.0%
TTGGACCGAAGAAAAAAGAG+CGG + chr1.2:24708064-24708083 None:intergenic 40.0%
TTTGCAGGTAGATTAAGGGA+AGG - chr1.2:24705682-24705701 MS.gene026143:CDS 40.0%
! ATAGTAACCTTTTGGCAACG+GGG + chr1.2:24708255-24708274 None:intergenic 40.0%
! CATAGTAACCTTTTGGCAAC+GGG + chr1.2:24708256-24708275 None:intergenic 40.0%
! CCATAGTAACCTTTTGGCAA+CGG + chr1.2:24708257-24708276 None:intergenic 40.0%
! GAGTTTCTTTTCGATGTTCC+TGG - chr1.2:24705826-24705845 MS.gene026143:CDS 40.0%
! GATTGTTGTTATAGGTGACG+TGG + chr1.2:24708116-24708135 None:intergenic 40.0%
! GCGTTTCCATAGTAACCTTT+TGG + chr1.2:24708263-24708282 None:intergenic 40.0%
! GTATCGGTATAGGATACACA+GGG + chr1.2:24706394-24706413 None:intergenic 40.0%
! TATCGAGCATGTATCGGTAT+AGG + chr1.2:24706404-24706423 None:intergenic 40.0%
! TCAACCTCCTTTTCCTTGTT+TGG - chr1.2:24705801-24705820 MS.gene026143:CDS 40.0%
! TGTATCGGTATAGGATACAC+AGG + chr1.2:24706395-24706414 None:intergenic 40.0%
!! AAACTTATGGTGGATTGCAC+TGG - chr1.2:24705715-24705734 MS.gene026143:CDS 40.0%
!!! GAGATGTTGATTTTGGTTGG+GGG - chr1.2:24708489-24708508 MS.gene026143:CDS 40.0%
!!! TCATGAGGTGTTGGTTTTGA+TGG + chr1.2:24705508-24705527 None:intergenic 40.0%
AAAGTTCGGGGTTCCAATTC+TGG + chr1.2:24705989-24706008 None:intergenic 45.0%
AACCTTCAATCTCACCGGTA+TGG - chr1.2:24707925-24707944 MS.gene026143:intron 45.0%
AGAAGCTCTCTATGCCATAC+CGG + chr1.2:24707942-24707961 None:intergenic 45.0%
AGGTCCTGCTAGGAAACTTA+TGG - chr1.2:24705702-24705721 MS.gene026143:CDS 45.0%
ATTACAACCAGATACGGACG+AGG - chr1.2:24708184-24708203 MS.gene026143:intron 45.0%
CACTCCAATCCTTCTTATCC+AGG - chr1.2:24705867-24705886 MS.gene026143:CDS 45.0%
CCGTTGCCAAAAGGTTACTA+TGG - chr1.2:24708254-24708273 MS.gene026143:intron 45.0%
CCTGCAGTTGTAATTGCAAC+AGG + chr1.2:24708296-24708315 None:intergenic 45.0%
CCTGTTGCAATTACAACTGC+AGG - chr1.2:24708293-24708312 MS.gene026143:intron 45.0%
CCTTGGGTGAAATTTCTTGC+GGG - chr1.2:24707895-24707914 MS.gene026143:intron 45.0%
CGATGAGTGCATGTTACTCT+TGG + chr1.2:24707981-24708000 None:intergenic 45.0%
CGGTGGACCATTTCATCTAA+GGG + chr1.2:24708044-24708063 None:intergenic 45.0%
CTCTTTAACGAACCTCTCCA+TGG + chr1.2:24708645-24708664 None:intergenic 45.0%
GCCTTGGGTGAAATTTCTTG+CGG - chr1.2:24707894-24707913 MS.gene026143:intron 45.0%
GGGTCTTTCCCTTCCATATT+TGG + chr1.2:24705610-24705629 None:intergenic 45.0%
GTCCAATTCATGAGTGCCTT+GGG - chr1.2:24707879-24707898 MS.gene026143:intron 45.0%
GTGTCTGATGTTACACATGC+TGG - chr1.2:24708461-24708480 MS.gene026143:CDS 45.0%
TCCACCATAAGTTTCCTAGC+AGG + chr1.2:24705709-24705728 None:intergenic 45.0%
TCCTGCTAGGAAACTTATGG+TGG - chr1.2:24705705-24705724 MS.gene026143:CDS 45.0%
TCGTCCAAACAAGGAAAAGG+AGG + chr1.2:24705808-24705827 None:intergenic 45.0%
TGAGTGCATGTTACTCTTGG+TGG + chr1.2:24707978-24707997 None:intergenic 45.0%
TGCTAAAGGAGAGGAAGGTT+TGG - chr1.2:24708592-24708611 MS.gene026143:CDS 45.0%
TTGTTTGCCAACTCAAGCCA+TGG - chr1.2:24708625-24708644 MS.gene026143:CDS 45.0%
! TAGTAACCTTTTGGCAACGG+GGG + chr1.2:24708254-24708273 None:intergenic 45.0%
! TCTGGGATACAAGGGATATG+CGG - chr1.2:24706501-24706520 MS.gene026143:intron 45.0%
! TGAGCTTAGCTCAGTTGGTA+TGG + chr1.2:24706030-24706049 None:intergenic 45.0%
!! GCTTGAGTTGGCAAACAAAG+TGG + chr1.2:24708623-24708642 None:intergenic 45.0%
!! GGGAAGTATCGAGCATGTAT+CGG + chr1.2:24706410-24706429 None:intergenic 45.0%
!!! GTCCACCGCTCTTTTTTCTT+CGG - chr1.2:24708056-24708075 MS.gene026143:intron 45.0%
!! TTTGATAAATTAATTAAAAT+TGG + chr1.2:24707397-24707416 None:intergenic 5.0%
!!! AACTATTTTATTTTATTTTT+TGG + chr1.2:24706280-24706299 None:intergenic 5.0%
AACCTCTCCATGGCTTGAGT+TGG + chr1.2:24708635-24708654 None:intergenic 50.0%
AAGGTTCAGTCCAGTGGATG+AGG - chr1.2:24706170-24706189 MS.gene026143:CDS 50.0%
ATCAGGTAGCCCGCACATAT+CGG + chr1.2:24706534-24706553 None:intergenic 50.0%
CAGAGACACAAAACAGACGG+CGG + chr1.2:24706691-24706710 None:intergenic 50.0%
CAGGTAACACGTCTCAAGTG+TGG - chr1.2:24707801-24707820 MS.gene026143:intron 50.0%
CCCGCAAGAAATTTCACCCA+AGG + chr1.2:24707898-24707917 None:intergenic 50.0%
CGAAGTGCAGATAACTCGGT+TGG + chr1.2:24708083-24708102 None:intergenic 50.0%
CGGTGGAAAACCGATATGTG+CGG - chr1.2:24706521-24706540 MS.gene026143:intron 50.0%
GACCGAAGAAAAAAGAGCGG+TGG + chr1.2:24708061-24708080 None:intergenic 50.0%
GATTAAGGGAAGGTCCTGCT+AGG - chr1.2:24705692-24705711 MS.gene026143:CDS 50.0%
GCGGTGGACCATTTCATCTA+AGG + chr1.2:24708045-24708064 None:intergenic 50.0%
GGTCCAATTCATGAGTGCCT+TGG - chr1.2:24707878-24707897 MS.gene026143:intron 50.0%
GGTGGAAAACCGATATGTGC+GGG - chr1.2:24706522-24706541 MS.gene026143:intron 50.0%
GGTTGGGGGAAAGCTGTATA+TGG - chr1.2:24708503-24708522 MS.gene026143:CDS 50.0%
GTAACACGTCTCAAGTGTGG+TGG - chr1.2:24707804-24707823 MS.gene026143:intron 50.0%
GTATATGGAGGACCAGCTAC+AGG - chr1.2:24708518-24708537 MS.gene026143:CDS 50.0%
TCTCGTGAGCTTAGCTCAGT+TGG + chr1.2:24706035-24706054 None:intergenic 50.0%
TGCCATACCGGTGAGATTGA+AGG + chr1.2:24707930-24707949 None:intergenic 50.0%
TGGGGGAAAGCTGTATATGG+AGG - chr1.2:24708506-24708525 MS.gene026143:CDS 50.0%
TTCAATCCCCCGTTGCCAAA+AGG - chr1.2:24708245-24708264 MS.gene026143:intron 50.0%
! CACCCAAGGCACTCATGAAT+TGG + chr1.2:24707884-24707903 None:intergenic 50.0%
!! ATGGTGGATTGCACTGGAGA+AGG - chr1.2:24705721-24705740 MS.gene026143:CDS 50.0%
!! TGGCATCGATACGCAGATAC+AGG + chr1.2:24706931-24706950 None:intergenic 50.0%
ACACCAACTCCTCCTGTAGC+TGG + chr1.2:24708533-24708552 None:intergenic 55.0%
CATACGATGAGCGATGCGAC+GGG - chr1.2:24707852-24707871 MS.gene026143:intron 55.0%
CCATACGATGAGCGATGCGA+CGG - chr1.2:24707851-24707870 MS.gene026143:intron 55.0%
CGAACTTCCTCGTCCGTATC+TGG + chr1.2:24708194-24708213 None:intergenic 55.0%
CGATTGTACGGCAACGCCAA+AGG + chr1.2:24708163-24708182 None:intergenic 55.0%
GGGATACAAGGGATATGCGG+TGG - chr1.2:24706504-24706523 MS.gene026143:intron 55.0%
TATGGAGGACCAGCTACAGG+AGG - chr1.2:24708521-24708540 MS.gene026143:CDS 55.0%
TGCCAACTCAAGCCATGGAG+AGG - chr1.2:24708630-24708649 MS.gene026143:CDS 55.0%
! GGGTCGACCACATTTTACCG+TGG - chr1.2:24708424-24708443 MS.gene026143:CDS 55.0%
!! GGAGGAGTTGGTGTTACACC+TGG - chr1.2:24708539-24708558 MS.gene026143:CDS 55.0%
CCGTCGCATCGCTCATCGTA+TGG + chr1.2:24707854-24707873 None:intergenic 60.0%
GGACCAGCTACAGGAGGAGT+TGG - chr1.2:24708527-24708546 MS.gene026143:CDS 60.0%
! GATGAGCGATGCGACGGGTT+TGG - chr1.2:24707857-24707876 MS.gene026143:intron 60.0%


Chromosome Type Strat End Strand Name
chr1.2 gene 24705451 24708745 24705451 ID=MS.gene026143
chr1.2 mRNA 24705451 24708745 24705451 ID=MS.gene026143.t1;Parent=MS.gene026143
chr1.2 exon 24708308 24708745 24708308 ID=MS.gene026143.t1.exon1;Parent=MS.gene026143.t1
chr1.2 CDS 24708308 24708745 24708308 ID=cds.MS.gene026143.t1;Parent=MS.gene026143.t1
chr1.2 exon 24706080 24706392 24706080 ID=MS.gene026143.t1.exon2;Parent=MS.gene026143.t1
chr1.2 CDS 24706080 24706392 24706080 ID=cds.MS.gene026143.t1;Parent=MS.gene026143.t1
chr1.2 exon 24705451 24706001 24705451 ID=MS.gene026143.t1.exon3;Parent=MS.gene026143.t1
chr1.2 CDS 24705451 24706001 24705451 ID=cds.MS.gene026143.t1;Parent=MS.gene026143.t1
Gene Sequence

>MS.gene026143

ATGGCCCAATCTCTTTTATTCACAGTGAAGAGAAGTGCCCCTGAATTTGTAAGACCATCAAAACCAACACCTCATGAAATAAAATTACTCTCAGATATAGATGACCAAGAAGGGTTACGTTTTCAAATTCCAGTGATACAATTTTATAAATATGATCCAAATATGGAAGGGAAAGACCCTGTTGATATTATTAGAAAAGCATTAGCAAAAACACTTGTGTTTTATTATCCATTTGCAGGTAGATTAAGGGAAGGTCCTGCTAGGAAACTTATGGTGGATTGCACTGGAGAAGGTGTTTTGTTCATTGAAGCTGATGCTGATGTTAGTTTGAAAGAATTTGGTGACGCTCTTCAACCTCCTTTTCCTTGTTTGGACGAGTTTCTTTTCGATGTTCCTGGTTATTCAGATGTGATTAACACTCCAATCCTTCTTATCCAGGTATATTATTGATATTTTCATGATGTATCAAAGGTCTCTTAATTTCTCAAAAGAAATAGAGAAATTTATTTATAGCACCGATTTTTTTTTGTGGTGACCAGAATTGGAACCCCGAACTTTACATATATTATATATTGTCCATACCAACTGAGCTAAGCTCACGAGATCATAACACAAATCATTTGAAATTACAGTTTCATTTACTTAATCCCTTTCCAATAAAATATAAGCAAACTTAATTAGTTACACACTTATTAATATAACTAGTTATTTAATTAAAAAAGGTTCAGTCCAGTGGATGAGGTTAGAGTTTAGATTTATATATTGTACCGAGTTAATGTTTGAATATCGAATAGAATTGCTATAAATGGATAGCATTTAAAGGAAGCCAAAAAATAAAATAAAATAGTTATTCAAATTTATTACTGGATTCTTATATTTGATATATTCGTTCCATTCTCTGATGAAGCCTAGATACTTCAAAATGATTGACGTATCATATCCCTGTGTATCCTATACCGATACATGCTCGATACTTCCCAATACGTATCAGGAAAGTATCCGAATATTAATTTTTTTTTAAAAACAATTATCCGATACTTTTCAAATACATCTGGGATACAAGGGATATGCGGTGGAAAACCGATATGTGCGGGCTACCTGATGTTTCTATTATATTTGGTACATATGTAATTGACTAAGTAATGATGCTTTTTATTTATGATATATCATATATGTAATTAACTAATTGTCGCTTTCTTTATTATCAATATTATTTACATTTATATTTCTATTGTTGCCGCCGTCTGTTTTGTGTCTCTGTGTTTGTTTGAAAACAATGCTATTGTTTTATTGTGTGAAGGGAATTTCATTGTTGTGCCTTATTGTTTTTCTATGTCTGTTTGGTCTAGGTTTTGCGCCATTTTTTTTGCTTTTGAGTTTTAGTCCATATTTTGTATTTTGAGTTTTAATATGTAGTTTAAATTTAATTTTTTATTGAAGTATCTCAGCCGTATCGTATCTTAAATTTTAAAATGTTCCTGTATCTGCGTATCGATGCCATATCATATCCTTATCGTATCATATATCTAGGCTTCATAGGTTCCATTTGAAGTAATTATATTCAAAGTGTCTTGGACACTAAATATGGATATATCATTCGATCCATGCTATAACATTGCTTCGTTATGCTGAAAGAGTTTAACCTCTTTCACTAGACTCAACATCTATACTTACATTGCACTTTCATTTTATTTAACTATATATATATAGAAACAAGTGGACATTTAATTTAACAAAATTGAATTTTAAATTAAGGACATCTTTAATATACTATCATTGAATAGATGTATTTCTCAAAAAAAAAAAATATCATTGAATATTGAATAGATGCATTTGTCAACAAAAAAAAATCATTGAATAGATGTAGAAAAGTCGAAATTTGTTTATAACCTAATTAATTAACTCAAATCTTGTATTCACAATCACAAGTGTTTAATTATGGTCCAATTTTAATTAATTTATCAAAATAAAATTATGATTAGGAAAATACTAAATGGTACGACAATGTTTTCGCTTTAATTGCACGACACTACTAACTTGCTTCTTTTTTAATTTAAATATAACTTAAAATAATGCATTCAATTCCTGATTTATTCTTTTACAAGAAATCACAAGTTATAAATTACTAGTACATCATATTTCTTGCCACTTCTCCGATGTTTTGTCTTGTTTGATACCAACAATCCAATACTTAATGGGGTTAAAAGAGTTTTGAGTTTTGATCTTAAAGTCTTTGATTTTCTTTTTATGGGAAACTTGCATGTTGTTAAAGGGTTCGTGCGTATTCGTGTGTCAAGTATGTCGCACCACATATATCACATCTCTTACATAATTGATTTGTAACTATGTGCAGGTAACACGTCTCAAGTGTGGTGGTTTCATATTTGCTCTTCGTCTAAACCATACGATGAGCGATGCGACGGGTTTGGTCCAATTCATGAGTGCCTTGGGTGAAATTTCTTGCGGGATGAATGAACCTTCAATCTCACCGGTATGGCATAGAGAGCTTCTAAACGCAAGGGATCCACCAAGAGTAACATGCACTCATCGTGAATACGAACAAGTTCCTGACACAAAAGGAACCATTATACCCTTAGATGAAATGGTCCACCGCTCTTTTTTCTTCGGTCCAACCGAGTTATCTGCACTTCGTTCTCTATTTCCACGTCACCTATAACAACAATCCAAATTCGAAATCATCACTGCATGCCTTTGGCGTTGCCGTACAATCGCATTACAACCAGATACGGACGAGGAAGTTCGCATAATTTGCTTATACAATGCACGTCGCAAGTTCAATCCCCCGTTGCCAAAAGGTTACTATGGAAACGCTTTTGCGTTTCCTGTTGCAATTACAACTGCAGGAAAACTAATTGAAAATCCATTAGGGTATGCACTTGAGTTAGTTAAAAAAGCTAAATCAGATGTCGCTCAAGAATACATGTATTCAGTTGCGGATTTAATGGTTATCAAGGGTCGACCACATTTTACCGTGGTGAGAATGTACTTAGTGTCTGATGTTACACATGCTGGACTTAGAGATGTTGATTTTGGTTGGGGGAAAGCTGTATATGGAGGACCAGCTACAGGAGGAGTTGGTGTTACACCTGGTGTTGCTAGCTTTTATATACCTTTCAAAAATGCTAAAGGAGAGGAAGGTTTGGTTATACCACTTTGTTTGCCAACTCAAGCCATGGAGAGGTTCGTTAAAGAGTTAGATAGTTTGCTTAAGAGAAACATTAGCCAATCTACTAAAGATGATCCAAAATATGCTATCATTAATTCTTCGTTGTAG
Protein sequence

>MS.gene026143.t1

MAQSLLFTVKRSAPEFVRPSKPTPHEIKLLSDIDDQEGLRFQIPVIQFYKYDPNMEGKDPVDIIRKALAKTLVFYYPFAGRLREGPARKLMVDCTGEGVLFIEADADVSLKEFGDALQPPFPCLDEFLFDVPGYSDVINTPILLIQVTRLKCGGFIFALRLNHTMSDATGLVQFMSALGEISCGMNEPSISPVWHRELLNARDPPRVTCTHREYEQVPDTKGTIIPLDEMVHRSFFFGPTELSALRSLFPHTDEEVRIICLYNARRKFNPPLPKGYYGNAFAFPVAITTAGKLIENPLGYALELVKKAKSDVAQEYMYSVADLMVIKGRPHFTVVRMYLVSDVTHAGLRDVDFGWGKAVYGGPATGGVGVTPGVASFYIPFKNAKGEEGLVIPLCLPTQAMERFVKELDSLLKRNISQSTKDDPKYAIINSSL