Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene38363.t1 | XP_003603067.1 | 91.9 | 421 | 33 | 1 | 1 | 420 | 36 | 456 | 8.40E-231 | 809.3 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene38363.t1 | Q9SND9 | 36.9 | 417 | 243 | 12 | 1 | 409 | 34 | 438 | 4.2e-61 | 236.9 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene38363.t1 | G7J6X4 | 91.9 | 421 | 33 | 1 | 1 | 420 | 36 | 456 | 6.1e-231 | 809.3 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene049283 | MS.gene38363 | 0.803288 | 3.74E-49 | -1.69E-46 |
MS.gene049452 | MS.gene38363 | 0.821243 | 4.48E-53 | -1.69E-46 |
MS.gene051368 | MS.gene38363 | 0.818605 | 1.80E-52 | -1.69E-46 |
MS.gene05308 | MS.gene38363 | 0.802341 | 5.87E-49 | -1.69E-46 |
MS.gene053931 | MS.gene38363 | 0.826912 | 2.09E-54 | -1.69E-46 |
MS.gene054892 | MS.gene38363 | 0.800027 | 1.75E-48 | -1.69E-46 |
MS.gene054893 | MS.gene38363 | 0.80462 | 1.98E-49 | -1.69E-46 |
MS.gene055222 | MS.gene38363 | 0.807088 | 6.00E-50 | -1.69E-46 |
MS.gene055841 | MS.gene38363 | 0.812547 | 4.01E-51 | -1.69E-46 |
MS.gene05686 | MS.gene38363 | 0.811554 | 6.61E-51 | -1.69E-46 |
MS.gene057208 | MS.gene38363 | 0.862584 | 4.57E-64 | -1.69E-46 |
MS.gene058781 | MS.gene38363 | 0.807677 | 4.50E-50 | -1.69E-46 |
MS.gene058783 | MS.gene38363 | 0.807223 | 5.61E-50 | -1.69E-46 |
MS.gene060935 | MS.gene38363 | 0.80134 | 9.43E-49 | -1.69E-46 |
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene38363.t1 | MTR_3g101960 | 91.924 | 421 | 33 | 1 | 1 | 420 | 36 | 456 | 0.0 | 815 |
MS.gene38363.t1 | MTR_3g102020 | 86.618 | 411 | 53 | 1 | 1 | 409 | 36 | 446 | 0.0 | 751 |
MS.gene38363.t1 | MTR_3g101970 | 86.131 | 411 | 41 | 2 | 1 | 409 | 36 | 432 | 0.0 | 731 |
MS.gene38363.t1 | MTR_3g102010 | 80.918 | 414 | 70 | 3 | 1 | 409 | 37 | 446 | 0.0 | 694 |
MS.gene38363.t1 | MTR_3g101900 | 69.492 | 413 | 116 | 4 | 1 | 409 | 37 | 443 | 0.0 | 585 |
MS.gene38363.t1 | MTR_3g101930 | 66.826 | 419 | 124 | 5 | 1 | 409 | 37 | 450 | 0.0 | 577 |
MS.gene38363.t1 | MTR_3g102030 | 74.528 | 318 | 55 | 2 | 50 | 367 | 29 | 320 | 4.30e-174 | 489 |
MS.gene38363.t1 | MTR_4g015180 | 40.821 | 463 | 206 | 11 | 1 | 409 | 34 | 482 | 3.20e-100 | 307 |
MS.gene38363.t1 | MTR_3g070170 | 39.956 | 453 | 201 | 12 | 1 | 409 | 40 | 465 | 1.40e-99 | 305 |
MS.gene38363.t1 | MTR_5g081960 | 39.655 | 464 | 209 | 11 | 1 | 409 | 34 | 481 | 2.09e-97 | 300 |
MS.gene38363.t1 | MTR_4g094842 | 39.810 | 422 | 227 | 11 | 2 | 409 | 35 | 443 | 1.01e-87 | 274 |
MS.gene38363.t1 | MTR_8g041770 | 39.012 | 405 | 232 | 9 | 8 | 409 | 44 | 436 | 2.77e-86 | 270 |
MS.gene38363.t1 | MTR_4g022720 | 40.148 | 406 | 224 | 9 | 9 | 409 | 39 | 430 | 2.65e-85 | 267 |
MS.gene38363.t1 | MTR_4g094835 | 38.702 | 416 | 233 | 10 | 2 | 409 | 40 | 441 | 1.04e-83 | 263 |
MS.gene38363.t1 | MTR_4g094838 | 37.850 | 428 | 224 | 9 | 2 | 418 | 36 | 432 | 1.09e-83 | 263 |
MS.gene38363.t1 | MTR_4g022800 | 38.889 | 414 | 227 | 10 | 8 | 409 | 38 | 437 | 1.27e-83 | 263 |
MS.gene38363.t1 | MTR_0190s0020 | 37.931 | 406 | 237 | 8 | 8 | 409 | 43 | 437 | 4.76e-83 | 261 |
MS.gene38363.t1 | MTR_4g022825 | 37.530 | 413 | 232 | 10 | 8 | 409 | 38 | 435 | 4.14e-80 | 254 |
MS.gene38363.t1 | MTR_4g022670 | 38.499 | 413 | 229 | 10 | 8 | 409 | 38 | 436 | 1.84e-79 | 252 |
MS.gene38363.t1 | MTR_3g088420 | 37.990 | 408 | 230 | 10 | 8 | 409 | 38 | 428 | 1.03e-78 | 250 |
MS.gene38363.t1 | MTR_7g026860 | 37.440 | 414 | 229 | 12 | 8 | 409 | 38 | 433 | 7.23e-76 | 243 |
MS.gene38363.t1 | MTR_4g094828 | 37.931 | 406 | 219 | 13 | 7 | 395 | 42 | 431 | 1.42e-75 | 243 |
MS.gene38363.t1 | MTR_3g026310 | 37.288 | 413 | 222 | 12 | 9 | 401 | 39 | 434 | 6.93e-73 | 235 |
MS.gene38363.t1 | MTR_4g022290 | 35.750 | 400 | 226 | 10 | 7 | 393 | 43 | 424 | 2.27e-72 | 234 |
MS.gene38363.t1 | MTR_4g094832 | 39.833 | 359 | 200 | 7 | 65 | 418 | 83 | 430 | 2.40e-72 | 233 |
MS.gene38363.t1 | MTR_8g079710 | 36.919 | 409 | 226 | 16 | 1 | 395 | 36 | 426 | 4.61e-67 | 220 |
MS.gene38363.t1 | MTR_4g022760 | 37.349 | 332 | 186 | 8 | 8 | 328 | 38 | 358 | 2.43e-61 | 204 |
MS.gene38363.t1 | MTR_6g045553 | 32.360 | 445 | 247 | 11 | 2 | 409 | 43 | 470 | 1.62e-58 | 198 |
MS.gene38363.t1 | MTR_8g040780 | 36.406 | 217 | 134 | 3 | 198 | 411 | 14 | 229 | 3.73e-40 | 144 |
MS.gene38363.t1 | MTR_6g016815 | 29.820 | 389 | 197 | 10 | 24 | 409 | 61 | 376 | 7.35e-40 | 147 |
MS.gene38363.t1 | MTR_8g075610 | 27.296 | 392 | 242 | 15 | 32 | 404 | 47 | 414 | 1.77e-33 | 130 |
MS.gene38363.t1 | MTR_2g064495 | 26.221 | 389 | 253 | 14 | 32 | 404 | 56 | 426 | 1.19e-30 | 122 |
MS.gene38363.t1 | MTR_4g007540 | 27.342 | 395 | 242 | 15 | 32 | 404 | 56 | 427 | 1.74e-30 | 122 |
MS.gene38363.t1 | MTR_7g026850 | 43.919 | 148 | 73 | 4 | 8 | 154 | 21 | 159 | 3.51e-30 | 115 |
MS.gene38363.t1 | MTR_2g105330 | 25.964 | 389 | 254 | 14 | 32 | 404 | 56 | 426 | 4.22e-30 | 121 |
MS.gene38363.t1 | MTR_8g096530 | 28.889 | 315 | 193 | 11 | 26 | 326 | 53 | 350 | 7.04e-28 | 115 |
MS.gene38363.t1 | MTR_3g049150 | 26.316 | 418 | 252 | 15 | 20 | 404 | 46 | 440 | 1.45e-27 | 114 |
MS.gene38363.t1 | MTR_7g026770 | 36.723 | 177 | 91 | 3 | 119 | 295 | 132 | 287 | 2.41e-27 | 110 |
MS.gene38363.t1 | MTR_3g098980 | 27.667 | 300 | 196 | 7 | 32 | 322 | 66 | 353 | 8.95e-27 | 111 |
MS.gene38363.t1 | MTR_4g127650 | 26.847 | 406 | 224 | 16 | 32 | 395 | 66 | 440 | 1.74e-26 | 111 |
MS.gene38363.t1 | MTR_4g094825 | 30.263 | 228 | 144 | 4 | 191 | 418 | 179 | 391 | 1.31e-25 | 107 |
MS.gene38363.t1 | MTR_4g094825 | 31.050 | 219 | 121 | 9 | 7 | 208 | 105 | 310 | 1.61e-19 | 90.1 |
MS.gene38363.t1 | MTR_3g026950 | 25.701 | 428 | 245 | 18 | 26 | 409 | 48 | 446 | 2.39e-25 | 107 |
MS.gene38363.t1 | MTR_4g097090 | 27.000 | 400 | 232 | 15 | 32 | 395 | 65 | 440 | 6.01e-25 | 106 |
MS.gene38363.t1 | MTR_6g053810 | 31.379 | 290 | 173 | 13 | 33 | 308 | 72 | 349 | 4.41e-24 | 104 |
MS.gene38363.t1 | MTR_6g034495 | 43.220 | 118 | 63 | 3 | 43 | 157 | 45 | 161 | 2.30e-23 | 96.3 |
MS.gene38363.t1 | MTR_8g040760 | 35.359 | 181 | 107 | 5 | 8 | 187 | 41 | 212 | 5.22e-23 | 97.1 |
MS.gene38363.t1 | MTR_7g114470 | 26.253 | 419 | 260 | 18 | 8 | 400 | 38 | 433 | 4.24e-22 | 98.6 |
MS.gene38363.t1 | MTR_7g027175 | 26.257 | 358 | 229 | 13 | 20 | 363 | 56 | 392 | 6.40e-22 | 97.8 |
MS.gene38363.t1 | MTR_5g076700 | 25.000 | 412 | 273 | 15 | 8 | 400 | 37 | 431 | 6.95e-22 | 97.8 |
MS.gene38363.t1 | MTR_1g040175 | 28.261 | 368 | 225 | 17 | 29 | 383 | 61 | 402 | 1.67e-21 | 96.7 |
MS.gene38363.t1 | MTR_3g112180 | 27.378 | 347 | 226 | 11 | 29 | 363 | 58 | 390 | 6.31e-21 | 94.7 |
MS.gene38363.t1 | MTR_7g114550 | 25.659 | 417 | 263 | 18 | 8 | 400 | 37 | 430 | 5.75e-20 | 92.0 |
MS.gene38363.t1 | MTR_1g040195 | 24.752 | 404 | 266 | 14 | 15 | 400 | 21 | 404 | 7.94e-20 | 91.7 |
MS.gene38363.t1 | MTR_1g040215 | 28.866 | 291 | 187 | 11 | 29 | 311 | 61 | 339 | 3.17e-19 | 89.7 |
MS.gene38363.t1 | MTR_1g081660 | 26.598 | 391 | 246 | 17 | 29 | 401 | 70 | 437 | 3.97e-19 | 89.4 |
MS.gene38363.t1 | MTR_7g086000 | 26.799 | 403 | 233 | 18 | 35 | 397 | 63 | 443 | 6.69e-19 | 89.0 |
MS.gene38363.t1 | MTR_3g465980 | 26.471 | 306 | 186 | 12 | 12 | 298 | 49 | 334 | 1.20e-18 | 88.2 |
MS.gene38363.t1 | MTR_7g114560 | 26.077 | 418 | 260 | 18 | 8 | 400 | 37 | 430 | 1.40e-18 | 87.8 |
MS.gene38363.t1 | MTR_3g071320 | 26.184 | 359 | 205 | 13 | 31 | 359 | 59 | 387 | 5.27e-18 | 85.9 |
MS.gene38363.t1 | MTR_7g114960 | 26.010 | 396 | 266 | 12 | 29 | 409 | 60 | 443 | 5.42e-18 | 86.3 |
MS.gene38363.t1 | MTR_6g034485 | 34.646 | 127 | 76 | 2 | 169 | 291 | 2 | 125 | 1.56e-17 | 79.0 |
MS.gene38363.t1 | MTR_3g465930 | 27.599 | 279 | 174 | 9 | 32 | 295 | 69 | 334 | 1.40e-16 | 82.0 |
MS.gene38363.t1 | MTR_3g465990 | 26.384 | 307 | 185 | 13 | 12 | 298 | 49 | 334 | 1.52e-16 | 81.6 |
MS.gene38363.t1 | MTR_4g055170 | 24.555 | 281 | 185 | 8 | 32 | 298 | 69 | 336 | 2.81e-16 | 80.9 |
MS.gene38363.t1 | MTR_7g084940 | 24.359 | 312 | 205 | 10 | 28 | 324 | 65 | 360 | 5.75e-16 | 79.7 |
MS.gene38363.t1 | MTR_4g013050 | 23.441 | 401 | 233 | 15 | 30 | 404 | 51 | 403 | 1.13e-15 | 79.0 |
MS.gene38363.t1 | MTR_7g026830 | 47.500 | 80 | 40 | 2 | 65 | 143 | 19 | 97 | 1.37e-15 | 72.4 |
MS.gene38363.t1 | MTR_2g015430 | 25.166 | 302 | 202 | 10 | 32 | 322 | 58 | 346 | 1.70e-14 | 75.5 |
MS.gene38363.t1 | MTR_5g090830 | 24.149 | 323 | 192 | 15 | 13 | 306 | 49 | 347 | 5.21e-14 | 73.9 |
MS.gene38363.t1 | MTR_5g090810 | 23.529 | 323 | 194 | 15 | 13 | 306 | 49 | 347 | 1.34e-13 | 72.8 |
MS.gene38363.t1 | MTR_3g028210 | 24.638 | 414 | 258 | 14 | 23 | 400 | 58 | 453 | 2.09e-13 | 72.0 |
MS.gene38363.t1 | MTR_3g465950 | 26.277 | 274 | 183 | 7 | 33 | 295 | 69 | 334 | 2.25e-13 | 72.0 |
MS.gene38363.t1 | MTR_2g045540 | 35.227 | 88 | 49 | 1 | 206 | 293 | 27 | 106 | 5.65e-13 | 65.5 |
MS.gene38363.t1 | MTR_7g085990 | 25.588 | 340 | 206 | 14 | 12 | 327 | 39 | 355 | 1.01e-12 | 70.1 |
MS.gene38363.t1 | MTR_5g090880 | 23.784 | 370 | 230 | 16 | 28 | 363 | 63 | 414 | 1.20e-12 | 69.7 |
MS.gene38363.t1 | MTR_3g049140 | 24.242 | 198 | 136 | 4 | 206 | 389 | 27 | 224 | 1.44e-12 | 67.8 |
MS.gene38363.t1 | MTR_7g085930 | 25.145 | 346 | 208 | 14 | 12 | 331 | 43 | 363 | 3.33e-12 | 68.6 |
MS.gene38363.t1 | MTR_6g015315 | 24.038 | 416 | 274 | 16 | 11 | 400 | 42 | 441 | 3.73e-12 | 68.2 |
MS.gene38363.t1 | MTR_0502s0010 | 29.583 | 240 | 145 | 12 | 75 | 301 | 2 | 230 | 5.77e-12 | 65.9 |
MS.gene38363.t1 | MTR_8g079970 | 26.087 | 299 | 181 | 13 | 11 | 294 | 41 | 314 | 6.71e-12 | 67.4 |
MS.gene38363.t1 | MTR_7g084910 | 23.774 | 265 | 177 | 7 | 28 | 279 | 66 | 318 | 7.63e-12 | 67.0 |
MS.gene38363.t1 | MTR_6g015320 | 23.389 | 419 | 272 | 15 | 11 | 400 | 45 | 443 | 8.61e-12 | 67.0 |
MS.gene38363.t1 | MTR_2g089755 | 22.613 | 398 | 258 | 14 | 6 | 366 | 49 | 433 | 1.36e-11 | 66.6 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene38363.t1 | AT5G42830 | 57.452 | 416 | 162 | 4 | 1 | 409 | 37 | 444 | 7.73e-177 | 501 |
MS.gene38363.t1 | AT5G07850 | 55.961 | 411 | 179 | 2 | 1 | 409 | 38 | 448 | 2.79e-171 | 488 |
MS.gene38363.t1 | AT5G07860 | 54.831 | 414 | 175 | 5 | 1 | 409 | 38 | 444 | 2.92e-159 | 457 |
MS.gene38363.t1 | AT5G07870 | 51.537 | 423 | 187 | 3 | 1 | 409 | 38 | 456 | 3.13e-156 | 449 |
MS.gene38363.t1 | AT2G39980 | 41.485 | 458 | 201 | 9 | 1 | 409 | 36 | 475 | 2.35e-105 | 320 |
MS.gene38363.t1 | AT5G67150 | 41.587 | 416 | 224 | 12 | 2 | 409 | 37 | 441 | 1.74e-94 | 291 |
MS.gene38363.t1 | AT5G01210 | 40.716 | 447 | 211 | 10 | 1 | 409 | 34 | 464 | 1.99e-93 | 289 |
MS.gene38363.t1 | AT3G50270 | 36.993 | 419 | 243 | 12 | 1 | 409 | 36 | 443 | 1.43e-77 | 248 |
MS.gene38363.t1 | AT3G50280 | 36.817 | 421 | 246 | 12 | 1 | 413 | 34 | 442 | 2.90e-74 | 239 |
MS.gene38363.t1 | AT3G50300 | 36.476 | 403 | 238 | 9 | 1 | 396 | 34 | 425 | 6.08e-74 | 238 |
MS.gene38363.t1 | AT5G38130 | 35.980 | 403 | 238 | 11 | 1 | 396 | 54 | 443 | 4.37e-68 | 223 |
MS.gene38363.t1 | AT5G67160 | 34.963 | 409 | 241 | 11 | 6 | 410 | 41 | 428 | 1.62e-67 | 221 |
MS.gene38363.t1 | AT5G23940 | 33.255 | 424 | 258 | 10 | 2 | 409 | 33 | 447 | 1.06e-59 | 202 |
MS.gene38363.t1 | AT3G50280 | 37.987 | 308 | 180 | 7 | 108 | 409 | 6 | 308 | 3.81e-55 | 185 |
MS.gene38363.t1 | AT3G50290 | 39.689 | 257 | 146 | 6 | 111 | 360 | 15 | 269 | 3.88e-46 | 160 |
MS.gene38363.t1 | AT5G48930 | 27.536 | 414 | 251 | 16 | 13 | 404 | 41 | 427 | 4.62e-32 | 126 |
MS.gene38363.t1 | AT2G19070 | 26.969 | 419 | 246 | 16 | 12 | 395 | 42 | 435 | 1.46e-28 | 117 |
MS.gene38363.t1 | AT5G41040 | 28.205 | 312 | 194 | 9 | 26 | 322 | 63 | 359 | 1.94e-27 | 113 |
MS.gene38363.t1 | AT5G41040 | 28.013 | 307 | 201 | 7 | 26 | 322 | 79 | 375 | 2.42e-27 | 113 |
MS.gene38363.t1 | AT2G40230 | 26.933 | 375 | 215 | 13 | 27 | 373 | 54 | 397 | 1.12e-21 | 97.1 |
MS.gene38363.t1 | AT3G48720 | 25.722 | 381 | 243 | 14 | 13 | 384 | 47 | 396 | 1.86e-21 | 96.3 |
MS.gene38363.t1 | AT5G63560 | 27.160 | 324 | 197 | 12 | 13 | 322 | 47 | 345 | 1.10e-20 | 94.0 |
MS.gene38363.t1 | AT1G28680 | 26.510 | 298 | 196 | 11 | 35 | 322 | 65 | 349 | 3.99e-19 | 89.0 |
MS.gene38363.t1 | AT1G28680 | 26.510 | 298 | 196 | 11 | 35 | 322 | 65 | 349 | 5.25e-19 | 89.4 |
MS.gene38363.t1 | AT1G31490 | 24.634 | 410 | 260 | 16 | 22 | 410 | 52 | 433 | 5.50e-19 | 89.0 |
MS.gene38363.t1 | AT5G57840 | 24.877 | 406 | 272 | 14 | 11 | 400 | 39 | 427 | 1.23e-18 | 88.2 |
MS.gene38363.t1 | AT1G78990 | 23.794 | 311 | 191 | 13 | 13 | 306 | 52 | 333 | 1.20e-17 | 85.1 |
MS.gene38363.t1 | AT1G32910 | 23.473 | 311 | 195 | 13 | 13 | 306 | 52 | 336 | 4.68e-17 | 83.2 |
MS.gene38363.t1 | AT1G27620 | 25.000 | 348 | 224 | 11 | 32 | 363 | 58 | 384 | 1.33e-15 | 79.0 |
MS.gene38363.t1 | AT5G16410 | 22.635 | 296 | 182 | 10 | 30 | 306 | 89 | 356 | 3.64e-13 | 71.6 |
MS.gene38363.t1 | AT2G25150 | 26.403 | 303 | 185 | 12 | 25 | 308 | 60 | 343 | 4.21e-13 | 71.2 |
MS.gene38363.t1 | AT1G65450 | 27.419 | 186 | 113 | 6 | 130 | 299 | 1 | 180 | 4.50e-12 | 66.6 |
MS.gene38363.t1 | AT5G39080 | 21.963 | 428 | 275 | 13 | 11 | 400 | 44 | 450 | 8.02e-11 | 64.3 |
Find 103 sgRNAs with CRISPR-Local
Find 108 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CCTCTTCCTAAGGAATATTT+TGG | 0.093791 | 3.2:-84851565 | MS.gene38363:CDS |
CAAAATGATGTTCCTGTTTA+TGG | 0.097445 | 3.2:-84851910 | MS.gene38363:CDS |
GAAGATTCTCTCTCTTAAAA+TGG | 0.174060 | 3.2:+84851777 | None:intergenic |
AATATGTATGGGAATGAATT+TGG | 0.204491 | 3.2:-84851325 | MS.gene38363:CDS |
TTGAATGGAAGGTTGATAAT+TGG | 0.293176 | 3.2:+84851835 | None:intergenic |
TCACCAAGGTTTAATATGTA+TGG | 0.306646 | 3.2:-84851337 | MS.gene38363:CDS |
AATCTTTATCAGCATTAGTT+TGG | 0.307683 | 3.2:-84851675 | MS.gene38363:CDS |
CTATAGACTCAGCTGGAAAA+TGG | 0.328484 | 3.2:+84851755 | None:intergenic |
TCTTGAAGAGAAGTCCCTTT+TGG | 0.328911 | 3.2:+84852355 | None:intergenic |
CTTCCTGCTCCTTCTTTACC+TGG | 0.359731 | 3.2:+84851235 | None:intergenic |
AGATGGTTTCCACAAGGTTA+TGG | 0.364094 | 3.2:-84851859 | MS.gene38363:CDS |
TGCTGTTGGTTTAGTGATGT+TGG | 0.387777 | 3.2:+84852330 | None:intergenic |
AATGGAAAAGTGTGAGAGAA+AGG | 0.389200 | 3.2:+84852271 | None:intergenic |
GCCGGAGAAAATGATGTTGC+TGG | 0.398572 | 3.2:-84851188 | MS.gene38363:CDS |
ATCACCAATACAATGATTCA+TGG | 0.399519 | 3.2:+84851978 | None:intergenic |
TTGGTGATGGAACAGCTTAT+TGG | 0.406142 | 3.2:-84851963 | MS.gene38363:CDS |
TTTCCATTTCTATCCCCTCT+CGG | 0.413697 | 3.2:-84852256 | MS.gene38363:CDS |
ACAATGGGTGGAACATCAAT+GGG | 0.415916 | 3.2:+84852108 | None:intergenic |
GTGGATAGGTTGATGTGAAA+TGG | 0.419118 | 3.2:+84851885 | None:intergenic |
CAGATGAAGAGTTCAACTTC+TGG | 0.424021 | 3.2:-84851162 | MS.gene38363:CDS |
ATTTGGAATGGGAAAAGCTT+TGG | 0.427618 | 3.2:-84851308 | MS.gene38363:CDS |
GGAGAGAACAACTTGCAAAA+TGG | 0.431719 | 3.2:-84851617 | MS.gene38363:CDS |
ATCAACCTATCCACAATAGA+TGG | 0.431811 | 3.2:-84851876 | MS.gene38363:CDS |
GACAATGGGTGGAACATCAA+TGG | 0.434178 | 3.2:+84852107 | None:intergenic |
TATTCAAATCACGGAATTAG+TGG | 0.438775 | 3.2:-84852022 | MS.gene38363:CDS |
TTCCATTTCTATCCCCTCTC+GGG | 0.439902 | 3.2:-84852255 | MS.gene38363:CDS |
TGTGAAATGGGACCATAAAC+AGG | 0.450206 | 3.2:+84851898 | None:intergenic |
TGATCCTTGCACTGTTATGA+TGG | 0.455482 | 3.2:-84851365 | MS.gene38363:CDS |
ATCTACACACTATATCCAAA+AGG | 0.455900 | 3.2:-84852370 | MS.gene38363:CDS |
TACAAATAACCGTACGAGAA+TGG | 0.458161 | 3.2:-84851593 | MS.gene38363:CDS |
AGTGTAAGAATGAGGATCTT+CGG | 0.458409 | 3.2:+84852212 | None:intergenic |
TCAAAGAACGATTGGACAAT+GGG | 0.466912 | 3.2:+84852093 | None:intergenic |
CCAAAATATTCCTTAGGAAG+AGG | 0.467793 | 3.2:+84851565 | None:intergenic |
AAGATTCTCTCTCTTAAAAT+GGG | 0.467841 | 3.2:+84851778 | None:intergenic |
GAATTCCCAAAATATTCCTT+AGG | 0.480035 | 3.2:+84851559 | None:intergenic |
TGTTCCATGAATCATTGTAT+TGG | 0.480232 | 3.2:-84851982 | MS.gene38363:CDS |
AACTCATCGTGATGTTTGAA+TGG | 0.482751 | 3.2:+84851820 | None:intergenic |
GACCCGAGAGGGGATAGAAA+TGG | 0.492196 | 3.2:+84852253 | None:intergenic |
AGTTTCGCTATAGACTCAGC+TGG | 0.493398 | 3.2:+84851748 | None:intergenic |
GAATTGCTGGAGAATGATCT+AGG | 0.495485 | 3.2:-84851502 | MS.gene38363:CDS |
CACCAAGGTTTAATATGTAT+GGG | 0.497351 | 3.2:-84851336 | MS.gene38363:CDS |
TTTGTTATCTATTCAAATCA+CGG | 0.498414 | 3.2:-84852031 | MS.gene38363:CDS |
ATGGAAAAGTGTGAGAGAAA+GGG | 0.500507 | 3.2:+84852272 | None:intergenic |
TTCCCATACATATTAAACCT+TGG | 0.501336 | 3.2:+84851334 | None:intergenic |
GTGCACGTCAACTACAACAC+CGG | 0.505056 | 3.2:-84851639 | MS.gene38363:CDS |
GACAAAGCAGTCAGCCATGA+TGG | 0.509313 | 3.2:-84852066 | MS.gene38363:CDS |
AGTGTTTGAGTTTGTCCACC+AGG | 0.515596 | 3.2:+84852295 | None:intergenic |
TATGGGAATGAATTTGGAAT+GGG | 0.522099 | 3.2:-84851319 | MS.gene38363:CDS |
ACATCATATCCAGGTAAAGA+AGG | 0.522329 | 3.2:-84851244 | MS.gene38363:CDS |
TGCTGGAGAATGATCTAGGA+TGG | 0.523136 | 3.2:-84851498 | MS.gene38363:CDS |
GGTTCTCAATGAAGTGCTGT+TGG | 0.527425 | 3.2:+84852316 | None:intergenic |
TGTCATGATCAAAGAACGAT+TGG | 0.527909 | 3.2:+84852085 | None:intergenic |
AAATCTGTTTGATAAACAAA+AGG | 0.527952 | 3.2:+84851394 | None:intergenic |
ATGAATCATTGTATTGGTGA+TGG | 0.530598 | 3.2:-84851976 | MS.gene38363:CDS |
TGGATAGGTTGATGTGAAAT+GGG | 0.531677 | 3.2:+84851886 | None:intergenic |
CATCGTGATGTTTGAATGGA+AGG | 0.541756 | 3.2:+84851824 | None:intergenic |
GGAAAAGTAACATCATATCC+AGG | 0.542909 | 3.2:-84851253 | MS.gene38363:CDS |
GGATATGCTAACAAATTCGA+TGG | 0.547641 | 3.2:-84851274 | MS.gene38363:CDS |
GATCCTTGCACTGTTATGAT+GGG | 0.548259 | 3.2:-84851364 | MS.gene38363:CDS |
TCTTGAAGTGTGTCTTTCGC+CGG | 0.548668 | 3.2:-84851206 | MS.gene38363:CDS |
TGCGGTGAGTGCTGAAACGA+CGG | 0.549616 | 3.2:-84851530 | MS.gene38363:CDS |
TATCCAGGTAAAGAAGGAGC+AGG | 0.550153 | 3.2:-84851238 | MS.gene38363:CDS |
AATAAATCATGATGATAAAG+TGG | 0.561465 | 3.2:-84851449 | MS.gene38363:CDS |
AAAGCTTTGGCAGTTAGAAG+TGG | 0.567341 | 3.2:-84851295 | MS.gene38363:CDS |
TCTACACACTATATCCAAAA+GGG | 0.567974 | 3.2:-84852369 | MS.gene38363:CDS |
ATGATCTAGGATGGGCAGCA+TGG | 0.569534 | 3.2:-84851489 | MS.gene38363:CDS |
ATCAAAGAACGATTGGACAA+TGG | 0.570569 | 3.2:+84852092 | None:intergenic |
AATGGAACCACCTCTTCCTA+AGG | 0.571584 | 3.2:-84851575 | MS.gene38363:CDS |
GTATGGGAATGAATTTGGAA+TGG | 0.573460 | 3.2:-84851320 | MS.gene38363:CDS |
ACAGCACTTCATTGAGAACC+TGG | 0.575720 | 3.2:-84852313 | MS.gene38363:CDS |
GAGTGCTGAAACGACGGTGG+GGG | 0.585490 | 3.2:-84851524 | MS.gene38363:CDS |
ACGAAAACAGTGTAAGAATG+AGG | 0.585728 | 3.2:+84852204 | None:intergenic |
CACAATAGATGGTTTCCACA+AGG | 0.586552 | 3.2:-84851865 | MS.gene38363:CDS |
GAGGTGGTTCCATTCTCGTA+CGG | 0.591000 | 3.2:+84851584 | None:intergenic |
AAATATTCCTTAGGAAGAGG+TGG | 0.594958 | 3.2:+84851568 | None:intergenic |
TGCGTAGGTCGGTTGAAGAG+TGG | 0.594966 | 3.2:-84851426 | MS.gene38363:CDS |
TGCACGTCAACTACAACACC+GGG | 0.595711 | 3.2:-84851638 | MS.gene38363:CDS |
GTGAGTGCTGAAACGACGGT+GGG | 0.603452 | 3.2:-84851526 | MS.gene38363:CDS |
AGTAACAAGACGACCCGAGA+GGG | 0.603722 | 3.2:+84852242 | None:intergenic |
ATACTCAAAGACTAGAACAT+GGG | 0.612835 | 3.2:+84851131 | None:intergenic |
TGAGTGCTGAAACGACGGTG+GGG | 0.614267 | 3.2:-84851525 | MS.gene38363:CDS |
CTACCCATCATAACAGTGCA+AGG | 0.614444 | 3.2:+84851361 | None:intergenic |
CATACTCAAAGACTAGAACA+TGG | 0.617067 | 3.2:+84851130 | None:intergenic |
GGAAACCATCTATTGTGGAT+AGG | 0.621301 | 3.2:+84851871 | None:intergenic |
GATATAGTGTGTAGATAACA+TGG | 0.622938 | 3.2:+84852377 | None:intergenic |
AAGACAAGGTATGACCATCA+TGG | 0.623830 | 3.2:+84852052 | None:intergenic |
GTCGATTGCAACAACAGTCG+CGG | 0.624393 | 3.2:-84852183 | MS.gene38363:CDS |
GCTGGAGAATGATCTAGGAT+GGG | 0.628974 | 3.2:-84851497 | MS.gene38363:CDS |
AAGAACGATTGGACAATGGG+TGG | 0.640899 | 3.2:+84852096 | None:intergenic |
ATGATGATAAAGTGGTGCGT+AGG | 0.641507 | 3.2:-84851441 | MS.gene38363:CDS |
ATAATTGGACCATAACCTTG+TGG | 0.645522 | 3.2:+84851850 | None:intergenic |
TATAGCGAAACTGAAAGCAA+AGG | 0.650352 | 3.2:-84851737 | MS.gene38363:CDS |
CTTGTGGAAACCATCTATTG+TGG | 0.654333 | 3.2:+84851866 | None:intergenic |
TGATAAAGTGGTGCGTAGGT+CGG | 0.663573 | 3.2:-84851437 | MS.gene38363:CDS |
CAAATCACGGAATTAGTGGA+CGG | 0.665273 | 3.2:-84852018 | MS.gene38363:CDS |
GGTGAGTGCTGAAACGACGG+TGG | 0.672156 | 3.2:-84851527 | MS.gene38363:CDS |
GTAACAAGACGACCCGAGAG+GGG | 0.682817 | 3.2:+84852243 | None:intergenic |
CAATGGGTGGAACATCAATG+GGG | 0.692928 | 3.2:+84852109 | None:intergenic |
TTGAATAGATAACAAAGACA+AGG | 0.704301 | 3.2:+84852038 | None:intergenic |
TTATGATGGGTAGTTCACCA+AGG | 0.706961 | 3.2:-84851351 | MS.gene38363:CDS |
GCACTTCATTGAGAACCTGG+TGG | 0.715971 | 3.2:-84852310 | MS.gene38363:CDS |
AATGGGTGGAACATCAATGG+GGG | 0.729082 | 3.2:+84852110 | None:intergenic |
TAGTAACAAGACGACCCGAG+AGG | 0.734460 | 3.2:+84852241 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAATCTGTTTGATAAACAAA+AGG | + | chr3.2:84852119-84852138 | None:intergenic | 20.0% |
!! | AATAAATCATGATGATAAAG+TGG | - | chr3.2:84852061-84852080 | MS.gene38363:CDS | 20.0% |
!!! | TTTGTTATCTATTCAAATCA+CGG | - | chr3.2:84851479-84851498 | MS.gene38363:CDS | 20.0% |
! | AAGATTCTCTCTCTTAAAAT+GGG | + | chr3.2:84851735-84851754 | None:intergenic | 25.0% |
! | AATATGTATGGGAATGAATT+TGG | - | chr3.2:84852185-84852204 | MS.gene38363:CDS | 25.0% |
! | AATCTTTATCAGCATTAGTT+TGG | - | chr3.2:84851835-84851854 | MS.gene38363:CDS | 25.0% |
! | TTGAATAGATAACAAAGACA+AGG | + | chr3.2:84851475-84851494 | None:intergenic | 25.0% |
ATCACCAATACAATGATTCA+TGG | + | chr3.2:84851535-84851554 | None:intergenic | 30.0% | |
ATCTACACACTATATCCAAA+AGG | - | chr3.2:84851140-84851159 | MS.gene38363:CDS | 30.0% | |
CAAAATGATGTTCCTGTTTA+TGG | - | chr3.2:84851600-84851619 | MS.gene38363:CDS | 30.0% | |
CACCAAGGTTTAATATGTAT+GGG | - | chr3.2:84852174-84852193 | MS.gene38363:CDS | 30.0% | |
GAAGATTCTCTCTCTTAAAA+TGG | + | chr3.2:84851736-84851755 | None:intergenic | 30.0% | |
GAATTCCCAAAATATTCCTT+AGG | + | chr3.2:84851954-84851973 | None:intergenic | 30.0% | |
TATTCAAATCACGGAATTAG+TGG | - | chr3.2:84851488-84851507 | MS.gene38363:CDS | 30.0% | |
TCACCAAGGTTTAATATGTA+TGG | - | chr3.2:84852173-84852192 | MS.gene38363:CDS | 30.0% | |
TCTACACACTATATCCAAAA+GGG | - | chr3.2:84851141-84851160 | MS.gene38363:CDS | 30.0% | |
TGTTCCATGAATCATTGTAT+TGG | - | chr3.2:84851528-84851547 | MS.gene38363:CDS | 30.0% | |
TTCCCATACATATTAAACCT+TGG | + | chr3.2:84852179-84852198 | None:intergenic | 30.0% | |
! | ATGAATCATTGTATTGGTGA+TGG | - | chr3.2:84851534-84851553 | MS.gene38363:CDS | 30.0% |
! | CTCTTCCTAAGGAATATTTT+GGG | - | chr3.2:84851946-84851965 | MS.gene38363:CDS | 30.0% |
! | TATGGGAATGAATTTGGAAT+GGG | - | chr3.2:84852191-84852210 | MS.gene38363:CDS | 30.0% |
!! | TTGAATGGAAGGTTGATAAT+TGG | + | chr3.2:84851678-84851697 | None:intergenic | 30.0% |
AAATATTCCTTAGGAAGAGG+TGG | + | chr3.2:84851945-84851964 | None:intergenic | 35.0% | |
AACTCATCGTGATGTTTGAA+TGG | + | chr3.2:84851693-84851712 | None:intergenic | 35.0% | |
ACATCATATCCAGGTAAAGA+AGG | - | chr3.2:84852266-84852285 | MS.gene38363:CDS | 35.0% | |
ACGAAAACAGTGTAAGAATG+AGG | + | chr3.2:84851309-84851328 | None:intergenic | 35.0% | |
AGTGTAAGAATGAGGATCTT+CGG | + | chr3.2:84851301-84851320 | None:intergenic | 35.0% | |
ATAATTGGACCATAACCTTG+TGG | + | chr3.2:84851663-84851682 | None:intergenic | 35.0% | |
ATCAAAGAACGATTGGACAA+TGG | + | chr3.2:84851421-84851440 | None:intergenic | 35.0% | |
ATCAACCTATCCACAATAGA+TGG | - | chr3.2:84851634-84851653 | MS.gene38363:CDS | 35.0% | |
CCAAAATATTCCTTAGGAAG+AGG | + | chr3.2:84851948-84851967 | None:intergenic | 35.0% | |
GGAAAAGTAACATCATATCC+AGG | - | chr3.2:84852257-84852276 | MS.gene38363:CDS | 35.0% | |
GGATATGCTAACAAATTCGA+TGG | - | chr3.2:84852236-84852255 | MS.gene38363:CDS | 35.0% | |
GTATGGGAATGAATTTGGAA+TGG | - | chr3.2:84852190-84852209 | MS.gene38363:CDS | 35.0% | |
TACAAATAACCGTACGAGAA+TGG | - | chr3.2:84851917-84851936 | MS.gene38363:CDS | 35.0% | |
TATAGCGAAACTGAAAGCAA+AGG | - | chr3.2:84851773-84851792 | MS.gene38363:CDS | 35.0% | |
TCAAAGAACGATTGGACAAT+GGG | + | chr3.2:84851420-84851439 | None:intergenic | 35.0% | |
TGTCATGATCAAAGAACGAT+TGG | + | chr3.2:84851428-84851447 | None:intergenic | 35.0% | |
! | AATGGAAAAGTGTGAGAGAA+AGG | + | chr3.2:84851242-84851261 | None:intergenic | 35.0% |
! | ATGGAAAAGTGTGAGAGAAA+GGG | + | chr3.2:84851241-84851260 | None:intergenic | 35.0% |
! | ATTTGGAATGGGAAAAGCTT+TGG | - | chr3.2:84852202-84852221 | MS.gene38363:CDS | 35.0% |
! | CCTCTTCCTAAGGAATATTT+TGG | - | chr3.2:84851945-84851964 | MS.gene38363:CDS | 35.0% |
!! | TGGATAGGTTGATGTGAAAT+GGG | + | chr3.2:84851627-84851646 | None:intergenic | 35.0% |
!! | TTTTGGGAATTCACTTCATG+CGG | - | chr3.2:84851962-84851981 | MS.gene38363:CDS | 35.0% |
AAGACAAGGTATGACCATCA+TGG | + | chr3.2:84851461-84851480 | None:intergenic | 40.0% | |
ACAATGGGTGGAACATCAAT+GGG | + | chr3.2:84851405-84851424 | None:intergenic | 40.0% | |
AGATGGTTTCCACAAGGTTA+TGG | - | chr3.2:84851651-84851670 | MS.gene38363:CDS | 40.0% | |
ATGATGATAAAGTGGTGCGT+AGG | - | chr3.2:84852069-84852088 | MS.gene38363:CDS | 40.0% | |
CAAATCACGGAATTAGTGGA+CGG | - | chr3.2:84851492-84851511 | MS.gene38363:CDS | 40.0% | |
CACAATAGATGGTTTCCACA+AGG | - | chr3.2:84851645-84851664 | MS.gene38363:CDS | 40.0% | |
CAGATGAAGAGTTCAACTTC+TGG | - | chr3.2:84852348-84852367 | MS.gene38363:CDS | 40.0% | |
CATCGTGATGTTTGAATGGA+AGG | + | chr3.2:84851689-84851708 | None:intergenic | 40.0% | |
CTATAGACTCAGCTGGAAAA+TGG | + | chr3.2:84851758-84851777 | None:intergenic | 40.0% | |
CTTGTGGAAACCATCTATTG+TGG | + | chr3.2:84851647-84851666 | None:intergenic | 40.0% | |
GAATTGCTGGAGAATGATCT+AGG | - | chr3.2:84852008-84852027 | MS.gene38363:CDS | 40.0% | |
GATCCTTGCACTGTTATGAT+GGG | - | chr3.2:84852146-84852165 | MS.gene38363:CDS | 40.0% | |
GGAAACCATCTATTGTGGAT+AGG | + | chr3.2:84851642-84851661 | None:intergenic | 40.0% | |
GGAGAGAACAACTTGCAAAA+TGG | - | chr3.2:84851893-84851912 | MS.gene38363:CDS | 40.0% | |
TGATCCTTGCACTGTTATGA+TGG | - | chr3.2:84852145-84852164 | MS.gene38363:CDS | 40.0% | |
TGTGAAATGGGACCATAAAC+AGG | + | chr3.2:84851615-84851634 | None:intergenic | 40.0% | |
TTTCCATTTCTATCCCCTCT+CGG | - | chr3.2:84851254-84851273 | MS.gene38363:CDS | 40.0% | |
! | AAAGCTTTGGCAGTTAGAAG+TGG | - | chr3.2:84852215-84852234 | MS.gene38363:CDS | 40.0% |
! | TCCAGCAACATCATTTTCTC+CGG | + | chr3.2:84852326-84852345 | None:intergenic | 40.0% |
! | TCTTGAAGAGAAGTCCCTTT+TGG | + | chr3.2:84851158-84851177 | None:intergenic | 40.0% |
! | TTTTGCAAGTTGTTCTCTCC+CGG | + | chr3.2:84851893-84851912 | None:intergenic | 40.0% |
!! | GTGGATAGGTTGATGTGAAA+TGG | + | chr3.2:84851628-84851647 | None:intergenic | 40.0% |
!! | TGCTGTTGGTTTAGTGATGT+TGG | + | chr3.2:84851183-84851202 | None:intergenic | 40.0% |
!! | TTAGTGGACGGTGTTTTCAT+TGG | - | chr3.2:84851504-84851523 | MS.gene38363:CDS | 40.0% |
!! | TTATGATGGGTAGTTCACCA+AGG | - | chr3.2:84852159-84852178 | MS.gene38363:CDS | 40.0% |
!! | TTGGTGATGGAACAGCTTAT+TGG | - | chr3.2:84851547-84851566 | MS.gene38363:CDS | 40.0% |
AAGAACGATTGGACAATGGG+TGG | + | chr3.2:84851417-84851436 | None:intergenic | 45.0% | |
AATGGAACCACCTCTTCCTA+AGG | - | chr3.2:84851935-84851954 | MS.gene38363:CDS | 45.0% | |
AATGGGTGGAACATCAATGG+GGG | + | chr3.2:84851403-84851422 | None:intergenic | 45.0% | |
ACAGCACTTCATTGAGAACC+TGG | - | chr3.2:84851197-84851216 | MS.gene38363:CDS | 45.0% | |
AGTTTCGCTATAGACTCAGC+TGG | + | chr3.2:84851765-84851784 | None:intergenic | 45.0% | |
CAATGGGTGGAACATCAATG+GGG | + | chr3.2:84851404-84851423 | None:intergenic | 45.0% | |
CTACCCATCATAACAGTGCA+AGG | + | chr3.2:84852152-84852171 | None:intergenic | 45.0% | |
GACAATGGGTGGAACATCAA+TGG | + | chr3.2:84851406-84851425 | None:intergenic | 45.0% | |
GGGGGTGAGGATATCATTTA+TGG | + | chr3.2:84851385-84851404 | None:intergenic | 45.0% | |
TATCCAGGTAAAGAAGGAGC+AGG | - | chr3.2:84852272-84852291 | MS.gene38363:CDS | 45.0% | |
TCTTGAAGTGTGTCTTTCGC+CGG | - | chr3.2:84852304-84852323 | MS.gene38363:CDS | 45.0% | |
TGATAAAGTGGTGCGTAGGT+CGG | - | chr3.2:84852073-84852092 | MS.gene38363:CDS | 45.0% | |
TGCTGGAGAATGATCTAGGA+TGG | - | chr3.2:84852012-84852031 | MS.gene38363:CDS | 45.0% | |
TTCCATTTCTATCCCCTCTC+GGG | - | chr3.2:84851255-84851274 | MS.gene38363:CDS | 45.0% | |
! | AGTGTTTGAGTTTGTCCACC+AGG | + | chr3.2:84851218-84851237 | None:intergenic | 45.0% |
! | GCTGGAGAATGATCTAGGAT+GGG | - | chr3.2:84852013-84852032 | MS.gene38363:CDS | 45.0% |
!! | GGTTCTCAATGAAGTGCTGT+TGG | + | chr3.2:84851197-84851216 | None:intergenic | 45.0% |
AGTAACAAGACGACCCGAGA+GGG | + | chr3.2:84851271-84851290 | None:intergenic | 50.0% | |
CTTCCTGCTCCTTCTTTACC+TGG | + | chr3.2:84852278-84852297 | None:intergenic | 50.0% | |
GACAAAGCAGTCAGCCATGA+TGG | - | chr3.2:84851444-84851463 | MS.gene38363:CDS | 50.0% | |
GAGGTGGTTCCATTCTCGTA+CGG | + | chr3.2:84851929-84851948 | None:intergenic | 50.0% | |
GCACTTCATTGAGAACCTGG+TGG | - | chr3.2:84851200-84851219 | MS.gene38363:CDS | 50.0% | |
GCCGGAGAAAATGATGTTGC+TGG | - | chr3.2:84852322-84852341 | MS.gene38363:CDS | 50.0% | |
GTCGATTGCAACAACAGTCG+CGG | - | chr3.2:84851327-84851346 | MS.gene38363:CDS | 50.0% | |
GTGCACGTCAACTACAACAC+CGG | - | chr3.2:84851871-84851890 | MS.gene38363:CDS | 50.0% | |
TAGTAACAAGACGACCCGAG+AGG | + | chr3.2:84851272-84851291 | None:intergenic | 50.0% | |
TGCACGTCAACTACAACACC+GGG | - | chr3.2:84851872-84851891 | MS.gene38363:CDS | 50.0% | |
! | ATGATCTAGGATGGGCAGCA+TGG | - | chr3.2:84852021-84852040 | MS.gene38363:CDS | 50.0% |
GACCCGAGAGGGGATAGAAA+TGG | + | chr3.2:84851260-84851279 | None:intergenic | 55.0% | |
GTAACAAGACGACCCGAGAG+GGG | + | chr3.2:84851270-84851289 | None:intergenic | 55.0% | |
GTGGAACATCAATGGGGGTG+AGG | + | chr3.2:84851398-84851417 | None:intergenic | 55.0% | |
TGCGTAGGTCGGTTGAAGAG+TGG | - | chr3.2:84852084-84852103 | MS.gene38363:CDS | 55.0% | |
!! | GTGAGTGCTGAAACGACGGT+GGG | - | chr3.2:84851984-84852003 | MS.gene38363:CDS | 55.0% |
!! | TGAGTGCTGAAACGACGGTG+GGG | - | chr3.2:84851985-84852004 | MS.gene38363:CDS | 55.0% |
!! | TGCGGTGAGTGCTGAAACGA+CGG | - | chr3.2:84851980-84851999 | MS.gene38363:CDS | 55.0% |
AACGACGGTGGGGGAATTGC+TGG | - | chr3.2:84851995-84852014 | MS.gene38363:CDS | 60.0% | |
!! | GAGTGCTGAAACGACGGTGG+GGG | - | chr3.2:84851986-84852005 | MS.gene38363:CDS | 60.0% |
!! | GGTGAGTGCTGAAACGACGG+TGG | - | chr3.2:84851983-84852002 | MS.gene38363:CDS | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr3.2 | gene | 84851135 | 84852397 | 84851135 | ID=MS.gene38363 |
chr3.2 | mRNA | 84851135 | 84852397 | 84851135 | ID=MS.gene38363.t1;Parent=MS.gene38363 |
chr3.2 | exon | 84851135 | 84852397 | 84851135 | ID=MS.gene38363.t1.exon1;Parent=MS.gene38363.t1 |
chr3.2 | CDS | 84851135 | 84852397 | 84851135 | ID=cds.MS.gene38363.t1;Parent=MS.gene38363.t1 |
Gene Sequence |
Protein sequence |