Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene069321.t1 | AES73319.1 | 90.7 | 452 | 27 | 2 | 1 | 451 | 1 | 438 | 5.70E-241 | 843.2 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene069321.t1 | Q9SND9 | 36.1 | 449 | 266 | 11 | 6 | 446 | 4 | 439 | 2.1e-66 | 254.6 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene069321.t1 | G7J6X5 | 90.7 | 452 | 27 | 2 | 1 | 451 | 1 | 438 | 4.1e-241 | 843.2 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene05157 | MS.gene069321 | 0.803363 | 3.61E-49 | -1.69E-46 |
MS.gene054550 | MS.gene069321 | 0.803205 | 3.90E-49 | -1.69E-46 |
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene069321.t1 | MTR_3g101970 | 90.708 | 452 | 27 | 2 | 1 | 451 | 1 | 438 | 0.0 | 849 |
MS.gene069321.t1 | MTR_3g101960 | 87.865 | 445 | 54 | 0 | 1 | 445 | 1 | 445 | 0.0 | 831 |
MS.gene069321.t1 | MTR_3g102020 | 84.683 | 457 | 69 | 1 | 1 | 456 | 1 | 457 | 0.0 | 812 |
MS.gene069321.t1 | MTR_3g102010 | 80.000 | 460 | 84 | 2 | 1 | 456 | 2 | 457 | 0.0 | 762 |
MS.gene069321.t1 | MTR_3g101900 | 67.033 | 455 | 139 | 4 | 1 | 451 | 2 | 449 | 0.0 | 617 |
MS.gene069321.t1 | MTR_3g101930 | 66.000 | 450 | 139 | 5 | 9 | 449 | 10 | 454 | 0.0 | 602 |
MS.gene069321.t1 | MTR_3g102030 | 72.642 | 318 | 61 | 2 | 86 | 403 | 29 | 320 | 2.14e-168 | 476 |
MS.gene069321.t1 | MTR_4g015180 | 39.087 | 504 | 236 | 12 | 1 | 450 | 1 | 487 | 2.66e-97 | 301 |
MS.gene069321.t1 | MTR_3g070170 | 38.066 | 486 | 227 | 13 | 5 | 446 | 11 | 466 | 1.24e-96 | 299 |
MS.gene069321.t1 | MTR_5g081960 | 38.523 | 501 | 234 | 12 | 1 | 446 | 1 | 482 | 8.88e-96 | 297 |
MS.gene069321.t1 | MTR_4g094842 | 39.301 | 458 | 250 | 11 | 3 | 446 | 1 | 444 | 3.91e-93 | 289 |
MS.gene069321.t1 | MTR_4g022825 | 38.688 | 442 | 244 | 9 | 20 | 450 | 15 | 440 | 2.27e-89 | 279 |
MS.gene069321.t1 | MTR_8g041770 | 39.529 | 425 | 241 | 9 | 29 | 450 | 30 | 441 | 7.27e-89 | 278 |
MS.gene069321.t1 | MTR_4g022800 | 38.149 | 443 | 245 | 11 | 21 | 450 | 16 | 442 | 3.55e-88 | 276 |
MS.gene069321.t1 | MTR_0190s0020 | 38.642 | 427 | 246 | 8 | 28 | 450 | 28 | 442 | 3.55e-88 | 276 |
MS.gene069321.t1 | MTR_4g022720 | 39.080 | 435 | 245 | 9 | 21 | 450 | 16 | 435 | 8.05e-86 | 270 |
MS.gene069321.t1 | MTR_4g094835 | 36.980 | 457 | 260 | 10 | 3 | 446 | 1 | 442 | 1.38e-85 | 270 |
MS.gene069321.t1 | MTR_3g088420 | 38.621 | 435 | 241 | 10 | 23 | 450 | 18 | 433 | 3.24e-85 | 268 |
MS.gene069321.t1 | MTR_4g022670 | 37.868 | 441 | 248 | 9 | 21 | 450 | 16 | 441 | 7.25e-85 | 267 |
MS.gene069321.t1 | MTR_7g026860 | 36.961 | 441 | 249 | 10 | 21 | 450 | 16 | 438 | 1.38e-83 | 264 |
MS.gene069321.t1 | MTR_4g094838 | 36.916 | 428 | 235 | 8 | 28 | 446 | 27 | 428 | 8.75e-82 | 259 |
MS.gene069321.t1 | MTR_3g026310 | 38.182 | 440 | 239 | 11 | 29 | 450 | 24 | 448 | 5.73e-81 | 258 |
MS.gene069321.t1 | MTR_4g094828 | 36.481 | 466 | 254 | 14 | 8 | 451 | 6 | 451 | 8.53e-81 | 257 |
MS.gene069321.t1 | MTR_4g022290 | 36.429 | 420 | 235 | 10 | 23 | 429 | 24 | 424 | 4.85e-78 | 250 |
MS.gene069321.t1 | MTR_8g079710 | 37.296 | 429 | 228 | 15 | 21 | 431 | 21 | 426 | 3.49e-73 | 237 |
MS.gene069321.t1 | MTR_4g094832 | 39.193 | 347 | 200 | 5 | 105 | 446 | 86 | 426 | 7.85e-69 | 225 |
MS.gene069321.t1 | MTR_4g022760 | 32.880 | 441 | 226 | 10 | 21 | 450 | 16 | 397 | 1.03e-64 | 214 |
MS.gene069321.t1 | MTR_6g045553 | 31.405 | 484 | 271 | 12 | 5 | 449 | 13 | 474 | 2.39e-61 | 207 |
MS.gene069321.t1 | MTR_6g016815 | 31.163 | 430 | 214 | 12 | 23 | 450 | 32 | 381 | 2.62e-48 | 170 |
MS.gene069321.t1 | MTR_8g040780 | 38.073 | 218 | 130 | 4 | 240 | 453 | 20 | 236 | 7.24e-41 | 146 |
MS.gene069321.t1 | MTR_4g007540 | 26.269 | 453 | 288 | 16 | 6 | 440 | 3 | 427 | 2.98e-34 | 133 |
MS.gene069321.t1 | MTR_8g075610 | 28.856 | 402 | 223 | 15 | 68 | 440 | 47 | 414 | 1.23e-32 | 128 |
MS.gene069321.t1 | MTR_2g064495 | 26.781 | 407 | 270 | 13 | 48 | 440 | 34 | 426 | 3.33e-31 | 124 |
MS.gene069321.t1 | MTR_2g105330 | 26.536 | 407 | 271 | 13 | 48 | 440 | 34 | 426 | 1.00e-30 | 123 |
MS.gene069321.t1 | MTR_8g040760 | 36.406 | 217 | 127 | 6 | 8 | 223 | 6 | 212 | 5.29e-30 | 116 |
MS.gene069321.t1 | MTR_7g026850 | 43.333 | 150 | 74 | 4 | 42 | 190 | 20 | 159 | 9.93e-30 | 114 |
MS.gene069321.t1 | MTR_8g096530 | 30.159 | 315 | 189 | 11 | 62 | 362 | 53 | 350 | 3.14e-28 | 116 |
MS.gene069321.t1 | MTR_3g049150 | 28.019 | 414 | 230 | 18 | 56 | 431 | 46 | 429 | 3.98e-27 | 113 |
MS.gene069321.t1 | MTR_7g026770 | 37.640 | 178 | 90 | 3 | 155 | 332 | 132 | 288 | 6.59e-27 | 110 |
MS.gene069321.t1 | MTR_3g098980 | 29.967 | 307 | 187 | 12 | 68 | 362 | 66 | 356 | 3.42e-26 | 110 |
MS.gene069321.t1 | MTR_4g127650 | 26.292 | 445 | 262 | 17 | 19 | 431 | 30 | 440 | 1.14e-25 | 109 |
MS.gene069321.t1 | MTR_6g034495 | 44.915 | 118 | 61 | 3 | 79 | 193 | 45 | 161 | 4.74e-24 | 98.6 |
MS.gene069321.t1 | MTR_4g094825 | 38.667 | 150 | 81 | 2 | 301 | 450 | 253 | 391 | 8.03e-24 | 103 |
MS.gene069321.t1 | MTR_4g094825 | 33.846 | 195 | 112 | 6 | 29 | 220 | 92 | 272 | 1.39e-21 | 96.7 |
MS.gene069321.t1 | MTR_1g040175 | 28.883 | 367 | 224 | 17 | 65 | 419 | 61 | 402 | 1.27e-23 | 103 |
MS.gene069321.t1 | MTR_6g053810 | 31.488 | 289 | 174 | 12 | 69 | 344 | 72 | 349 | 3.37e-23 | 102 |
MS.gene069321.t1 | MTR_4g097090 | 24.330 | 448 | 275 | 16 | 29 | 440 | 30 | 449 | 2.60e-22 | 99.4 |
MS.gene069321.t1 | MTR_3g112180 | 27.666 | 347 | 225 | 11 | 65 | 399 | 58 | 390 | 4.12e-22 | 99.0 |
MS.gene069321.t1 | MTR_5g076700 | 24.837 | 459 | 291 | 17 | 2 | 436 | 3 | 431 | 6.07e-22 | 98.6 |
MS.gene069321.t1 | MTR_3g026950 | 25.432 | 405 | 248 | 16 | 62 | 431 | 48 | 433 | 6.56e-22 | 98.2 |
MS.gene069321.t1 | MTR_7g114470 | 25.397 | 441 | 281 | 18 | 33 | 447 | 28 | 446 | 1.45e-20 | 94.4 |
MS.gene069321.t1 | MTR_1g040195 | 24.762 | 420 | 277 | 16 | 50 | 450 | 21 | 420 | 1.83e-20 | 94.0 |
MS.gene069321.t1 | MTR_1g081660 | 26.923 | 390 | 246 | 15 | 65 | 437 | 70 | 437 | 5.91e-20 | 92.4 |
MS.gene069321.t1 | MTR_7g027175 | 28.840 | 319 | 200 | 11 | 56 | 362 | 56 | 359 | 1.78e-19 | 90.9 |
MS.gene069321.t1 | MTR_7g114550 | 25.727 | 447 | 276 | 20 | 30 | 447 | 24 | 443 | 2.62e-19 | 90.5 |
MS.gene069321.t1 | MTR_7g114520 | 26.151 | 478 | 288 | 19 | 2 | 448 | 4 | 447 | 4.81e-19 | 89.7 |
MS.gene069321.t1 | MTR_1g040215 | 27.011 | 348 | 217 | 15 | 13 | 347 | 16 | 339 | 5.80e-19 | 89.4 |
MS.gene069321.t1 | MTR_7g086000 | 26.768 | 396 | 242 | 17 | 71 | 433 | 63 | 443 | 1.00e-18 | 88.6 |
MS.gene069321.t1 | MTR_7g014160 | 25.214 | 468 | 293 | 20 | 15 | 441 | 16 | 467 | 1.29e-18 | 88.6 |
MS.gene069321.t1 | MTR_3g465980 | 25.575 | 348 | 217 | 13 | 6 | 334 | 10 | 334 | 1.85e-18 | 87.8 |
MS.gene069321.t1 | MTR_7g114960 | 25.945 | 397 | 267 | 11 | 65 | 446 | 60 | 444 | 8.20e-18 | 85.9 |
MS.gene069321.t1 | MTR_6g034485 | 33.065 | 124 | 82 | 1 | 205 | 327 | 2 | 125 | 1.49e-17 | 79.0 |
MS.gene069321.t1 | MTR_1g040315 | 27.362 | 307 | 196 | 11 | 30 | 325 | 23 | 313 | 5.16e-17 | 83.2 |
MS.gene069321.t1 | MTR_4g055170 | 24.555 | 281 | 185 | 8 | 68 | 334 | 69 | 336 | 8.46e-17 | 82.8 |
MS.gene069321.t1 | MTR_6g015320 | 25.799 | 407 | 251 | 15 | 60 | 436 | 58 | 443 | 1.16e-16 | 82.4 |
MS.gene069321.t1 | MTR_7g084940 | 25.524 | 286 | 183 | 10 | 64 | 334 | 65 | 335 | 1.24e-16 | 82.4 |
MS.gene069321.t1 | MTR_3g465990 | 25.145 | 346 | 221 | 13 | 6 | 334 | 10 | 334 | 1.42e-16 | 82.0 |
MS.gene069321.t1 | MTR_3g049140 | 27.451 | 204 | 130 | 5 | 242 | 431 | 27 | 226 | 4.90e-16 | 78.2 |
MS.gene069321.t1 | MTR_7g013850 | 24.823 | 423 | 252 | 16 | 30 | 402 | 30 | 436 | 6.76e-16 | 80.1 |
MS.gene069321.t1 | MTR_4g013050 | 24.688 | 401 | 220 | 16 | 66 | 436 | 51 | 399 | 1.14e-15 | 79.0 |
MS.gene069321.t1 | MTR_2g015430 | 25.073 | 343 | 228 | 13 | 71 | 401 | 61 | 386 | 1.54e-15 | 79.0 |
MS.gene069321.t1 | MTR_3g465930 | 26.619 | 278 | 178 | 9 | 68 | 331 | 69 | 334 | 3.21e-15 | 78.2 |
MS.gene069321.t1 | MTR_7g026830 | 50.000 | 70 | 34 | 1 | 111 | 179 | 28 | 97 | 8.00e-15 | 70.5 |
MS.gene069321.t1 | MTR_7g085930 | 23.333 | 420 | 265 | 15 | 50 | 431 | 45 | 445 | 4.25e-14 | 74.7 |
MS.gene069321.t1 | MTR_3g028210 | 23.567 | 471 | 295 | 19 | 6 | 436 | 8 | 453 | 1.50e-13 | 72.8 |
MS.gene069321.t1 | MTR_3g465910 | 25.965 | 285 | 167 | 11 | 69 | 331 | 69 | 331 | 1.69e-13 | 72.8 |
MS.gene069321.t1 | MTR_3g465950 | 27.240 | 279 | 174 | 9 | 69 | 331 | 69 | 334 | 8.38e-13 | 70.5 |
MS.gene069321.t1 | MTR_7g014620 | 23.776 | 429 | 276 | 19 | 29 | 432 | 15 | 417 | 8.81e-13 | 70.5 |
MS.gene069321.t1 | MTR_2g045540 | 35.227 | 88 | 49 | 1 | 242 | 329 | 27 | 106 | 1.07e-12 | 65.1 |
MS.gene069321.t1 | MTR_5g090830 | 22.997 | 387 | 240 | 17 | 48 | 399 | 49 | 412 | 1.16e-12 | 70.1 |
MS.gene069321.t1 | MTR_6g015315 | 25.420 | 417 | 257 | 16 | 55 | 439 | 50 | 444 | 1.36e-12 | 69.7 |
MS.gene069321.t1 | MTR_7g014610 | 22.717 | 449 | 293 | 18 | 29 | 436 | 29 | 464 | 4.93e-12 | 68.2 |
MS.gene069321.t1 | MTR_5g090810 | 22.481 | 387 | 242 | 16 | 48 | 399 | 49 | 412 | 5.07e-12 | 68.2 |
MS.gene069321.t1 | MTR_0502s0010 | 28.800 | 250 | 134 | 12 | 111 | 337 | 2 | 230 | 8.50e-12 | 65.5 |
MS.gene069321.t1 | MTR_7g056087 | 22.691 | 379 | 247 | 14 | 6 | 361 | 4 | 359 | 1.49e-11 | 66.6 |
MS.gene069321.t1 | MTR_5g090880 | 23.514 | 370 | 231 | 17 | 64 | 399 | 63 | 414 | 1.79e-11 | 66.2 |
MS.gene069321.t1 | MTR_7g014630 | 30.233 | 215 | 136 | 7 | 2 | 209 | 3 | 210 | 2.54e-11 | 65.5 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene069321.t1 | AT5G42830 | 56.278 | 446 | 179 | 4 | 13 | 451 | 14 | 450 | 0.0 | 517 |
MS.gene069321.t1 | AT5G07850 | 53.139 | 446 | 208 | 1 | 6 | 450 | 8 | 453 | 1.75e-171 | 489 |
MS.gene069321.t1 | AT5G07860 | 53.348 | 448 | 198 | 5 | 6 | 449 | 8 | 448 | 4.18e-164 | 471 |
MS.gene069321.t1 | AT5G07870 | 50.655 | 458 | 209 | 3 | 6 | 450 | 8 | 461 | 2.93e-161 | 464 |
MS.gene069321.t1 | AT5G67150 | 39.648 | 454 | 251 | 12 | 8 | 451 | 7 | 447 | 2.92e-101 | 310 |
MS.gene069321.t1 | AT2G39980 | 39.915 | 471 | 215 | 10 | 29 | 450 | 29 | 480 | 1.38e-99 | 306 |
MS.gene069321.t1 | AT5G01210 | 38.730 | 488 | 240 | 13 | 3 | 450 | 1 | 469 | 2.34e-90 | 283 |
MS.gene069321.t1 | AT3G50270 | 36.184 | 456 | 265 | 12 | 8 | 451 | 8 | 449 | 2.81e-84 | 266 |
MS.gene069321.t1 | AT3G50280 | 35.841 | 452 | 269 | 11 | 3 | 446 | 1 | 439 | 4.66e-80 | 255 |
MS.gene069321.t1 | AT3G50300 | 35.550 | 436 | 258 | 12 | 6 | 432 | 4 | 425 | 2.91e-77 | 248 |
MS.gene069321.t1 | AT5G38130 | 35.308 | 439 | 253 | 12 | 6 | 432 | 24 | 443 | 5.15e-72 | 235 |
MS.gene069321.t1 | AT5G67160 | 35.280 | 428 | 251 | 11 | 28 | 451 | 28 | 433 | 6.18e-70 | 228 |
MS.gene069321.t1 | AT5G23940 | 33.696 | 460 | 276 | 12 | 6 | 448 | 3 | 450 | 1.81e-65 | 218 |
MS.gene069321.t1 | AT3G50280 | 38.762 | 307 | 177 | 6 | 146 | 446 | 8 | 309 | 1.62e-56 | 190 |
MS.gene069321.t1 | AT3G50290 | 37.452 | 259 | 149 | 6 | 147 | 396 | 15 | 269 | 1.04e-42 | 152 |
MS.gene069321.t1 | AT5G48930 | 26.754 | 456 | 282 | 16 | 6 | 440 | 3 | 427 | 4.93e-34 | 132 |
MS.gene069321.t1 | AT2G19070 | 27.982 | 436 | 256 | 16 | 29 | 431 | 25 | 435 | 8.04e-33 | 129 |
MS.gene069321.t1 | AT5G41040 | 29.379 | 354 | 213 | 13 | 62 | 399 | 63 | 395 | 8.74e-28 | 115 |
MS.gene069321.t1 | AT5G41040 | 29.379 | 354 | 213 | 13 | 62 | 399 | 79 | 411 | 1.06e-27 | 115 |
MS.gene069321.t1 | AT3G48720 | 29.341 | 334 | 193 | 15 | 18 | 334 | 18 | 325 | 3.44e-23 | 102 |
MS.gene069321.t1 | AT1G31490 | 27.924 | 419 | 246 | 21 | 58 | 455 | 52 | 435 | 4.31e-21 | 95.9 |
MS.gene069321.t1 | AT1G65450 | 28.146 | 302 | 178 | 12 | 56 | 335 | 60 | 344 | 4.27e-20 | 92.8 |
MS.gene069321.t1 | AT5G63560 | 28.025 | 314 | 191 | 12 | 62 | 361 | 55 | 347 | 4.68e-20 | 92.4 |
MS.gene069321.t1 | AT2G40230 | 26.455 | 378 | 213 | 14 | 63 | 409 | 54 | 397 | 6.66e-19 | 89.0 |
MS.gene069321.t1 | AT1G28680 | 25.939 | 293 | 194 | 12 | 71 | 353 | 65 | 344 | 6.17e-18 | 85.9 |
MS.gene069321.t1 | AT1G28680 | 25.939 | 293 | 194 | 12 | 71 | 353 | 65 | 344 | 8.90e-18 | 85.9 |
MS.gene069321.t1 | AT3G26040 | 25.470 | 479 | 278 | 23 | 6 | 454 | 3 | 432 | 2.63e-17 | 84.3 |
MS.gene069321.t1 | AT1G27620 | 26.667 | 315 | 183 | 9 | 68 | 358 | 58 | 348 | 1.13e-16 | 82.4 |
MS.gene069321.t1 | AT1G78990 | 23.948 | 309 | 194 | 12 | 48 | 342 | 52 | 333 | 2.28e-16 | 81.6 |
MS.gene069321.t1 | AT2G25150 | 26.667 | 330 | 208 | 14 | 61 | 374 | 60 | 371 | 8.84e-16 | 79.7 |
MS.gene069321.t1 | AT5G16410 | 23.981 | 417 | 259 | 16 | 66 | 455 | 89 | 474 | 1.08e-15 | 79.7 |
MS.gene069321.t1 | AT3G03480 | 25.915 | 328 | 211 | 13 | 30 | 342 | 33 | 343 | 1.71e-15 | 79.0 |
MS.gene069321.t1 | AT1G03390 | 24.816 | 407 | 243 | 18 | 56 | 431 | 67 | 441 | 1.80e-14 | 75.9 |
MS.gene069321.t1 | AT1G65450 | 28.191 | 188 | 109 | 6 | 166 | 335 | 1 | 180 | 4.45e-13 | 70.1 |
MS.gene069321.t1 | AT5G39090 | 22.826 | 460 | 308 | 16 | 4 | 439 | 3 | 439 | 3.17e-12 | 68.6 |
MS.gene069321.t1 | AT5G39080 | 21.712 | 479 | 306 | 17 | 3 | 439 | 2 | 453 | 4.53e-11 | 65.1 |
Find 107 sgRNAs with CRISPR-Local
Find 119 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CCTCTTCCTAAGGAATATTT+TGG | 0.093791 | 3.3:-8575872 | MS.gene069321:CDS |
CAAAATGATATTCCTATTTA+TGG | 0.117107 | 3.3:-8576217 | MS.gene069321:CDS |
AATACGTATGGAAATGAATT+TGG | 0.183687 | 3.3:-8575632 | MS.gene069321:CDS |
TTAAATGGAAGGTTGATAAT+TGG | 0.249266 | 3.3:+8576142 | None:intergenic |
AACTCGTGGTGATGTTTAAA+TGG | 0.296206 | 3.3:+8576127 | None:intergenic |
AATCTTTATCAGCATTAGTT+TGG | 0.307683 | 3.3:-8575982 | MS.gene069321:CDS |
CCACTTATCATCACAGTATA+AGG | 0.318537 | 3.3:+8575668 | None:intergenic |
CACGAGTTTGTTCACACATA+TGG | 0.341216 | 3.3:-8576112 | MS.gene069321:CDS |
AATGTGTTAAATGACATATT+TGG | 0.351013 | 3.3:+8576719 | None:intergenic |
ATAATTGGACCATAACCTTC+TGG | 0.355852 | 3.3:+8576157 | None:intergenic |
TGTGAAATGGGACCATAAAT+AGG | 0.361964 | 3.3:+8576205 | None:intergenic |
TCATGCACGTCGACTACAAC+AGG | 0.363744 | 3.3:-8575948 | MS.gene069321:CDS |
TCAAAGAACAACTTGCAAAA+TGG | 0.371925 | 3.3:-8575924 | MS.gene069321:CDS |
AACATGCAGAAACGATGTTT+AGG | 0.378660 | 3.3:+8576776 | None:intergenic |
ACAATGGGTGGGACATCAAT+GGG | 0.389297 | 3.3:+8576415 | None:intergenic |
TCTGTGATGGAACATCTTAT+TGG | 0.391840 | 3.3:-8576270 | MS.gene069321:CDS |
GGATATGCTAACAAATTTGA+TGG | 0.406437 | 3.3:-8575581 | MS.gene069321:CDS |
CTCCCTCCTCCTTCTTGACC+TGG | 0.408040 | 3.3:+8575542 | None:intergenic |
AGATGGTTTCCAGAAGGTTA+TGG | 0.413058 | 3.3:-8576166 | MS.gene069321:CDS |
TTCCATTTCTATCCCCTCTC+AGG | 0.415536 | 3.3:-8576562 | MS.gene069321:CDS |
AACGACGGTAGGAGAGTTGC+TGG | 0.419039 | 3.3:-8575822 | MS.gene069321:CDS |
GTGGATAGGTTGATGTGAAA+TGG | 0.419118 | 3.3:+8576192 | None:intergenic |
ATCTACACATTATAACCAAA+AGG | 0.424756 | 3.3:-8576680 | MS.gene069321:CDS |
ATTTGGAATGGGAAAAGCTT+TGG | 0.427618 | 3.3:-8575615 | MS.gene069321:CDS |
AATATGTCATTTAACACATT+GGG | 0.429631 | 3.3:-8576716 | MS.gene069321:CDS |
ACATGCAGAAACGATGTTTA+GGG | 0.431483 | 3.3:+8576777 | None:intergenic |
ATCAACCTATCCACAATAGA+TGG | 0.431811 | 3.3:-8576183 | MS.gene069321:CDS |
ATTTGGTTTGAGTCTTCGAT+TGG | 0.434962 | 3.3:+8576736 | None:intergenic |
ATCACAGAGACAATGATTCA+TGG | 0.442497 | 3.3:+8576285 | None:intergenic |
TTTGGTTTGAGTCTTCGATT+GGG | 0.443458 | 3.3:+8576737 | None:intergenic |
TGCATGAATAAATTTAGCTC+CGG | 0.444458 | 3.3:+8576471 | None:intergenic |
AATGGAAAAGCGTGAGGGAA+AGG | 0.449937 | 3.3:+8576578 | None:intergenic |
AGTATAAGAATGAGGATCTT+CGG | 0.458409 | 3.3:+8576519 | None:intergenic |
TATGGAAATGAATTTGGAAT+GGG | 0.460328 | 3.3:-8575626 | MS.gene069321:CDS |
ATGGAAAAGCGTGAGGGAAA+GGG | 0.461186 | 3.3:+8576579 | None:intergenic |
GGTTCTCTATGAAATGTTGT+TGG | 0.465501 | 3.3:+8576623 | None:intergenic |
GACAATGGGTGGGACATCAA+TGG | 0.465845 | 3.3:+8576414 | None:intergenic |
TCAAAGAACGATTGGACAAT+GGG | 0.466912 | 3.3:+8576400 | None:intergenic |
GAGGTGGTTCCATTCTTGTT+CGG | 0.467336 | 3.3:+8575891 | None:intergenic |
CCAAAATATTCCTTAGGAAG+AGG | 0.467793 | 3.3:+8575872 | None:intergenic |
ATGATAATAAAGTGGTGCTT+AGG | 0.471109 | 3.3:-8575748 | MS.gene069321:CDS |
CAAGTCACAGAATTAGTAGA+TGG | 0.474789 | 3.3:-8576325 | MS.gene069321:CDS |
GAATTCCCAAAATATTCCTT+AGG | 0.477642 | 3.3:+8575866 | None:intergenic |
GGAAAAGTAATTTCATATCC+AGG | 0.482689 | 3.3:-8575560 | MS.gene069321:CDS |
GAGTTGCTGGAGAATGATCT+AGG | 0.486265 | 3.3:-8575809 | MS.gene069321:CDS |
TCACCGAGGTTTAATACGTA+TGG | 0.489403 | 3.3:-8575644 | MS.gene069321:CDS |
AAATATGTCATTTAACACAT+TGG | 0.493987 | 3.3:-8576717 | MS.gene069321:CDS |
AGTGTTTCAGTTTGTCCACC+AGG | 0.507243 | 3.3:+8576602 | None:intergenic |
TGTTGGTTTAGTAATGATGT+TGG | 0.510991 | 3.3:+8576640 | None:intergenic |
CAATGGGTGGGACATCAATG+GGG | 0.513002 | 3.3:+8576416 | None:intergenic |
TGCAAATCATGATAATAAAG+TGG | 0.522035 | 3.3:-8575756 | MS.gene069321:CDS |
TGCTGGAGAATGATCTAGGA+TGG | 0.522825 | 3.3:-8575805 | MS.gene069321:CDS |
ACCTGAGAAAATGATGGTGC+TGG | 0.523005 | 3.3:-8575495 | MS.gene069321:CDS |
TACAAACAACCGAACAAGAA+TGG | 0.524034 | 3.3:-8575900 | MS.gene069321:CDS |
TGTCATGATCAAAGAACGAT+TGG | 0.527909 | 3.3:+8576392 | None:intergenic |
GCATGAATAAATTTAGCTCC+GGG | 0.529301 | 3.3:+8576472 | None:intergenic |
TGGATAGGTTGATGTGAAAT+GGG | 0.531677 | 3.3:+8576193 | None:intergenic |
GTATGGAAATGAATTTGGAA+TGG | 0.534748 | 3.3:-8575627 | MS.gene069321:CDS |
CCTTATACTGTGATGATAAG+TGG | 0.535234 | 3.3:-8575668 | MS.gene069321:CDS |
AATGGAACCACCTCTTCCTA+AGG | 0.542226 | 3.3:-8575882 | MS.gene069321:CDS |
TGTAGTGAGTGCTGAAACGA+CGG | 0.546049 | 3.3:-8575837 | MS.gene069321:CDS |
TCTACACATTATAACCAAAA+GGG | 0.546861 | 3.3:-8576679 | MS.gene069321:CDS |
GGAAACCATCTATTGTGGAT+AGG | 0.548035 | 3.3:+8576178 | None:intergenic |
CGTGGTGATGTTTAAATGGA+AGG | 0.548108 | 3.3:+8576131 | None:intergenic |
AGTAACAAGACGACCTGAGA+GGG | 0.549751 | 3.3:+8576549 | None:intergenic |
GACCTGAGAGGGGATAGAAA+TGG | 0.554535 | 3.3:+8576560 | None:intergenic |
AAAGCTTTGGCAGTTAGAAG+TGG | 0.567341 | 3.3:-8575602 | MS.gene069321:CDS |
AATGGGTGGGACATCAATGG+GGG | 0.568371 | 3.3:+8576417 | None:intergenic |
TTGGTTTGAGTCTTCGATTG+GGG | 0.568932 | 3.3:+8576738 | None:intergenic |
ATGATCTAGGATGGGCAGCA+TGG | 0.569534 | 3.3:-8575796 | MS.gene069321:CDS |
ATCAAAGAACGATTGGACAA+TGG | 0.570569 | 3.3:+8576399 | None:intergenic |
ACGAAAACAGTATAAGAATG+AGG | 0.571532 | 3.3:+8576511 | None:intergenic |
GACAAAGCAGTCAACCATGA+TGG | 0.574887 | 3.3:-8576373 | MS.gene069321:CDS |
ATGAATCATTGTCTCTGTGA+TGG | 0.575359 | 3.3:-8576283 | MS.gene069321:CDS |
TGCTTAGGTCGGTTGAAGAG+TGG | 0.577268 | 3.3:-8575733 | MS.gene069321:CDS |
TATAGCGAAACTTAAAGCAA+AGG | 0.578915 | 3.3:-8576044 | MS.gene069321:CDS |
TATCCAGGTCAAGAAGGAGG+AGG | 0.584517 | 3.3:-8575545 | MS.gene069321:CDS |
CACAATAGATGGTTTCCAGA+AGG | 0.584706 | 3.3:-8576172 | MS.gene069321:CDS |
ATTTCATATCCAGGTCAAGA+AGG | 0.586316 | 3.3:-8575551 | MS.gene069321:CDS |
CAGAAACGATGTTTAGGGAA+GGG | 0.587217 | 3.3:+8576782 | None:intergenic |
GTTATAATGTGTAGATAACA+TGG | 0.589863 | 3.3:+8576687 | None:intergenic |
ATAGTCAAAGATTAGAACAA+AGG | 0.594150 | 3.3:+8575431 | None:intergenic |
AAATATTCCTTAGGAAGAGG+TGG | 0.594958 | 3.3:+8575875 | None:intergenic |
CTTCTGGAAACCATCTATTG+TGG | 0.595445 | 3.3:+8576173 | None:intergenic |
ATCCAGGTCAAGAAGGAGGA+GGG | 0.602246 | 3.3:-8575544 | MS.gene069321:CDS |
GCAGAAACGATGTTTAGGGA+AGG | 0.605789 | 3.3:+8576781 | None:intergenic |
TTTCCATACGTATTAAACCT+CGG | 0.609189 | 3.3:+8575641 | None:intergenic |
ACAACATTTCATAGAGAACC+TGG | 0.610615 | 3.3:-8576620 | MS.gene069321:CDS |
AAGAACGATTGGACAATGGG+TGG | 0.614907 | 3.3:+8576403 | None:intergenic |
AGAACGATTGGACAATGGGT+GGG | 0.617288 | 3.3:+8576404 | None:intergenic |
TAATAAAGTGGTGCTTAGGT+CGG | 0.624945 | 3.3:-8575744 | MS.gene069321:CDS |
GCTGGAGAATGATCTAGGAT+GGG | 0.629384 | 3.3:-8575804 | MS.gene069321:CDS |
TGGTTTGAGTCTTCGATTGG+GGG | 0.638810 | 3.3:+8576739 | None:intergenic |
GATAGAAATGGAAAAGCGTG+AGG | 0.641029 | 3.3:+8576572 | None:intergenic |
TCTTTCACCTGAGAAAATGA+TGG | 0.654677 | 3.3:-8575501 | MS.gene069321:CDS |
TCATATCCAGGTCAAGAAGG+AGG | 0.656740 | 3.3:-8575548 | MS.gene069321:CDS |
AAGACATGGTGTGACCATCA+TGG | 0.667161 | 3.3:+8576359 | None:intergenic |
GGCAGCATGGAAAATTCATG+TGG | 0.671300 | 3.3:-8575783 | MS.gene069321:CDS |
GTGAGTGCTGAAACGACGGT+AGG | 0.677302 | 3.3:-8575833 | MS.gene069321:CDS |
ATAGAAATGGAAAAGCGTGA+GGG | 0.687050 | 3.3:+8576573 | None:intergenic |
TAGTAACAAGACGACCTGAG+AGG | 0.695039 | 3.3:+8576548 | None:intergenic |
CATGCACGTCGACTACAACA+GGG | 0.700954 | 3.3:-8575947 | MS.gene069321:CDS |
TTGAATAGATAACAAAGACA+TGG | 0.705301 | 3.3:+8576345 | None:intergenic |
GTAACAAGACGACCTGAGAG+GGG | 0.714877 | 3.3:+8576550 | None:intergenic |
ACATTTCATAGAGAACCTGG+TGG | 0.735789 | 3.3:-8576617 | MS.gene069321:CDS |
TGATGATAAGTGGTTCACCG+AGG | 0.741768 | 3.3:-8575658 | MS.gene069321:CDS |
CATATGTGTGAACAAACTCG+TGG | 0.754058 | 3.3:+8576113 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAATCTAATCGATACAAAAA+AGG | + | chr3.3:8576534-8576553 | None:intergenic | 20.0% |
!! | AATGTGTTAAATGACATATT+TGG | + | chr3.3:8575516-8575535 | None:intergenic | 20.0% |
!! | CAAAATGATATTCCTATTTA+TGG | - | chr3.3:8576015-8576034 | MS.gene069321:CDS | 20.0% |
!!! | AAATATGTCATTTAACACAT+TGG | - | chr3.3:8575515-8575534 | MS.gene069321:CDS | 20.0% |
!!! | AAGATTCTCTCTTTTAAAAT+GGG | + | chr3.3:8576150-8576169 | None:intergenic | 20.0% |
!!! | AATATGTCATTTAACACATT+GGG | - | chr3.3:8575516-8575535 | MS.gene069321:CDS | 20.0% |
! | AATACGTATGGAAATGAATT+TGG | - | chr3.3:8576600-8576619 | MS.gene069321:CDS | 25.0% |
! | AATCTTTATCAGCATTAGTT+TGG | - | chr3.3:8576250-8576269 | MS.gene069321:CDS | 25.0% |
! | ATCTACACATTATAACCAAA+AGG | - | chr3.3:8575552-8575571 | MS.gene069321:CDS | 25.0% |
! | GTTATAATGTGTAGATAACA+TGG | + | chr3.3:8575548-8575567 | None:intergenic | 25.0% |
! | TCTACACATTATAACCAAAA+GGG | - | chr3.3:8575553-8575572 | MS.gene069321:CDS | 25.0% |
! | TGCAAATCATGATAATAAAG+TGG | - | chr3.3:8576476-8576495 | MS.gene069321:CDS | 25.0% |
! | TTGAATAGATAACAAAGACA+TGG | + | chr3.3:8575890-8575909 | None:intergenic | 25.0% |
!! | TATGGAAATGAATTTGGAAT+GGG | - | chr3.3:8576606-8576625 | MS.gene069321:CDS | 25.0% |
!!! | GAAGATTCTCTCTTTTAAAA+TGG | + | chr3.3:8576151-8576170 | None:intergenic | 25.0% |
!!! | TTAAATGGAAGGTTGATAAT+TGG | + | chr3.3:8576093-8576112 | None:intergenic | 25.0% |
ACGAAAACAGTATAAGAATG+AGG | + | chr3.3:8575724-8575743 | None:intergenic | 30.0% | |
AGTATAAGAATGAGGATCTT+CGG | + | chr3.3:8575716-8575735 | None:intergenic | 30.0% | |
ATGATAATAAAGTGGTGCTT+AGG | - | chr3.3:8576484-8576503 | MS.gene069321:CDS | 30.0% | |
GAATTCCCAAAATATTCCTT+AGG | + | chr3.3:8576369-8576388 | None:intergenic | 30.0% | |
GGAAAAGTAATTTCATATCC+AGG | - | chr3.3:8576672-8576691 | MS.gene069321:CDS | 30.0% | |
GGATATGCTAACAAATTTGA+TGG | - | chr3.3:8576651-8576670 | MS.gene069321:CDS | 30.0% | |
GTATGGAAATGAATTTGGAA+TGG | - | chr3.3:8576605-8576624 | MS.gene069321:CDS | 30.0% | |
TATAGCGAAACTTAAAGCAA+AGG | - | chr3.3:8576188-8576207 | MS.gene069321:CDS | 30.0% | |
TCAAAGAACAACTTGCAAAA+TGG | - | chr3.3:8576308-8576327 | MS.gene069321:CDS | 30.0% | |
TTTCCATACGTATTAAACCT+CGG | + | chr3.3:8576594-8576613 | None:intergenic | 30.0% | |
! | CTCTTCCTAAGGAATATTTT+GGG | - | chr3.3:8576361-8576380 | MS.gene069321:CDS | 30.0% |
! | TGCATGAATAAATTTAGCTC+CGG | + | chr3.3:8575764-8575783 | None:intergenic | 30.0% |
! | TTAGTAGATGGTGTTTTCAT+TGG | - | chr3.3:8575919-8575938 | MS.gene069321:CDS | 30.0% |
!! | TGTTGGTTTAGTAATGATGT+TGG | + | chr3.3:8575595-8575614 | None:intergenic | 30.0% |
AAATATTCCTTAGGAAGAGG+TGG | + | chr3.3:8576360-8576379 | None:intergenic | 35.0% | |
AACATGCAGAAACGATGTTT+AGG | + | chr3.3:8575459-8575478 | None:intergenic | 35.0% | |
ACAACATTTCATAGAGAACC+TGG | - | chr3.3:8575612-8575631 | MS.gene069321:CDS | 35.0% | |
ACATGCAGAAACGATGTTTA+GGG | + | chr3.3:8575458-8575477 | None:intergenic | 35.0% | |
ATAATTGGACCATAACCTTC+TGG | + | chr3.3:8576078-8576097 | None:intergenic | 35.0% | |
ATCAAAGAACGATTGGACAA+TGG | + | chr3.3:8575836-8575855 | None:intergenic | 35.0% | |
ATCAACCTATCCACAATAGA+TGG | - | chr3.3:8576049-8576068 | MS.gene069321:CDS | 35.0% | |
ATCACAGAGACAATGATTCA+TGG | + | chr3.3:8575950-8575969 | None:intergenic | 35.0% | |
ATGAATCATTGTCTCTGTGA+TGG | - | chr3.3:8575949-8575968 | MS.gene069321:CDS | 35.0% | |
ATTTCATATCCAGGTCAAGA+AGG | - | chr3.3:8576681-8576700 | MS.gene069321:CDS | 35.0% | |
CAAGTCACAGAATTAGTAGA+TGG | - | chr3.3:8575907-8575926 | MS.gene069321:CDS | 35.0% | |
CCAAAATATTCCTTAGGAAG+AGG | + | chr3.3:8576363-8576382 | None:intergenic | 35.0% | |
CCACTTATCATCACAGTATA+AGG | + | chr3.3:8576567-8576586 | None:intergenic | 35.0% | |
CCTTATACTGTGATGATAAG+TGG | - | chr3.3:8576564-8576583 | MS.gene069321:CDS | 35.0% | |
CTATAGATTCCGCTGAAAAA+TGG | + | chr3.3:8576173-8576192 | None:intergenic | 35.0% | |
GGTTCTCTATGAAATGTTGT+TGG | + | chr3.3:8575612-8575631 | None:intergenic | 35.0% | |
TAATAAAGTGGTGCTTAGGT+CGG | - | chr3.3:8576488-8576507 | MS.gene069321:CDS | 35.0% | |
TACAAACAACCGAACAAGAA+TGG | - | chr3.3:8576332-8576351 | MS.gene069321:CDS | 35.0% | |
TCAAAGAACGATTGGACAAT+GGG | + | chr3.3:8575835-8575854 | None:intergenic | 35.0% | |
TCTTTCACCTGAGAAAATGA+TGG | - | chr3.3:8576731-8576750 | MS.gene069321:CDS | 35.0% | |
TGTCATGATCAAAGAACGAT+TGG | + | chr3.3:8575843-8575862 | None:intergenic | 35.0% | |
TGTGAAATGGGACCATAAAT+AGG | + | chr3.3:8576030-8576049 | None:intergenic | 35.0% | |
! | AACTCGTGGTGATGTTTAAA+TGG | + | chr3.3:8576108-8576127 | None:intergenic | 35.0% |
! | ATAGAAATGGAAAAGCGTGA+GGG | + | chr3.3:8575662-8575681 | None:intergenic | 35.0% |
! | ATTTGGAATGGGAAAAGCTT+TGG | - | chr3.3:8576617-8576636 | MS.gene069321:CDS | 35.0% |
! | CCTCTTCCTAAGGAATATTT+TGG | - | chr3.3:8576360-8576379 | MS.gene069321:CDS | 35.0% |
! | GCATGAATAAATTTAGCTCC+GGG | + | chr3.3:8575763-8575782 | None:intergenic | 35.0% |
! | TCTGTGATGGAACATCTTAT+TGG | - | chr3.3:8575962-8575981 | MS.gene069321:CDS | 35.0% |
!! | ATTTGGTTTGAGTCTTCGAT+TGG | + | chr3.3:8575499-8575518 | None:intergenic | 35.0% |
!! | GAGAATCTTCCATTTTTCAG+CGG | - | chr3.3:8576161-8576180 | MS.gene069321:CDS | 35.0% |
!! | TGGATAGGTTGATGTGAAAT+GGG | + | chr3.3:8576042-8576061 | None:intergenic | 35.0% |
!! | TTTGGTTTGAGTCTTCGATT+GGG | + | chr3.3:8575498-8575517 | None:intergenic | 35.0% |
!! | TTTTGAAGAGAAGTCCCTTT+TGG | + | chr3.3:8575570-8575589 | None:intergenic | 35.0% |
ACATTTCATAGAGAACCTGG+TGG | - | chr3.3:8575615-8575634 | MS.gene069321:CDS | 40.0% | |
AGATGGTTTCCAGAAGGTTA+TGG | - | chr3.3:8576066-8576085 | MS.gene069321:CDS | 40.0% | |
CACAATAGATGGTTTCCAGA+AGG | - | chr3.3:8576060-8576079 | MS.gene069321:CDS | 40.0% | |
CAGAAACGATGTTTAGGGAA+GGG | + | chr3.3:8575453-8575472 | None:intergenic | 40.0% | |
CATATGTGTGAACAAACTCG+TGG | + | chr3.3:8576122-8576141 | None:intergenic | 40.0% | |
GGAAACCATCTATTGTGGAT+AGG | + | chr3.3:8576057-8576076 | None:intergenic | 40.0% | |
TCACCGAGGTTTAATACGTA+TGG | - | chr3.3:8576588-8576607 | MS.gene069321:CDS | 40.0% | |
! | AAAGCTTTGGCAGTTAGAAG+TGG | - | chr3.3:8576630-8576649 | MS.gene069321:CDS | 40.0% |
! | CACGAGTTTGTTCACACATA+TGG | - | chr3.3:8576120-8576139 | MS.gene069321:CDS | 40.0% |
! | CGTGGTGATGTTTAAATGGA+AGG | + | chr3.3:8576104-8576123 | None:intergenic | 40.0% |
! | CTTCTGGAAACCATCTATTG+TGG | + | chr3.3:8576062-8576081 | None:intergenic | 40.0% |
! | GATAGAAATGGAAAAGCGTG+AGG | + | chr3.3:8575663-8575682 | None:intergenic | 40.0% |
! | TTGGTTTGAGTCTTCGATTG+GGG | + | chr3.3:8575497-8575516 | None:intergenic | 40.0% |
!! | GTGGATAGGTTGATGTGAAA+TGG | + | chr3.3:8576043-8576062 | None:intergenic | 40.0% |
AAGAACGATTGGACAATGGG+TGG | + | chr3.3:8575832-8575851 | None:intergenic | 45.0% | |
AAGACATGGTGTGACCATCA+TGG | + | chr3.3:8575876-8575895 | None:intergenic | 45.0% | |
AATGGAACCACCTCTTCCTA+AGG | - | chr3.3:8576350-8576369 | MS.gene069321:CDS | 45.0% | |
ACAATGGGTGGGACATCAAT+GGG | + | chr3.3:8575820-8575839 | None:intergenic | 45.0% | |
AGAACGATTGGACAATGGGT+GGG | + | chr3.3:8575831-8575850 | None:intergenic | 45.0% | |
AGTAACAAGACGACCTGAGA+GGG | + | chr3.3:8575686-8575705 | None:intergenic | 45.0% | |
AGTGTTTCAGTTTGTCCACC+AGG | + | chr3.3:8575633-8575652 | None:intergenic | 45.0% | |
GACAAAGCAGTCAACCATGA+TGG | - | chr3.3:8575859-8575878 | MS.gene069321:CDS | 45.0% | |
GAGGTGGTTCCATTCTTGTT+CGG | + | chr3.3:8576344-8576363 | None:intergenic | 45.0% | |
GAGTTGCTGGAGAATGATCT+AGG | - | chr3.3:8576423-8576442 | MS.gene069321:CDS | 45.0% | |
GCAGAAACGATGTTTAGGGA+AGG | + | chr3.3:8575454-8575473 | None:intergenic | 45.0% | |
GGCAGCATGGAAAATTCATG+TGG | - | chr3.3:8576449-8576468 | MS.gene069321:CDS | 45.0% | |
GGGGGTGAGGATATCATTTA+TGG | + | chr3.3:8575800-8575819 | None:intergenic | 45.0% | |
GTCGATTGCAAAAACAGTCC+CGG | - | chr3.3:8575742-8575761 | MS.gene069321:CDS | 45.0% | |
TAGTAACAAGACGACCTGAG+AGG | + | chr3.3:8575687-8575706 | None:intergenic | 45.0% | |
TCATATCCAGGTCAAGAAGG+AGG | - | chr3.3:8576684-8576703 | MS.gene069321:CDS | 45.0% | |
TGATGATAAGTGGTTCACCG+AGG | - | chr3.3:8576574-8576593 | MS.gene069321:CDS | 45.0% | |
TGCTGGAGAATGATCTAGGA+TGG | - | chr3.3:8576427-8576446 | MS.gene069321:CDS | 45.0% | |
TGGTTTGAGTCTTCGATTGG+GGG | + | chr3.3:8575496-8575515 | None:intergenic | 45.0% | |
TTCCATTTCTATCCCCTCTC+AGG | - | chr3.3:8575670-8575689 | MS.gene069321:CDS | 45.0% | |
! | AATGGAAAAGCGTGAGGGAA+AGG | + | chr3.3:8575657-8575676 | None:intergenic | 45.0% |
! | ACCTGAGAAAATGATGGTGC+TGG | - | chr3.3:8576737-8576756 | MS.gene069321:CDS | 45.0% |
! | ATGGAAAAGCGTGAGGGAAA+GGG | + | chr3.3:8575656-8575675 | None:intergenic | 45.0% |
! | GCTGGAGAATGATCTAGGAT+GGG | - | chr3.3:8576428-8576447 | MS.gene069321:CDS | 45.0% |
! | TCCAGCACCATCATTTTCTC+AGG | + | chr3.3:8576741-8576760 | None:intergenic | 45.0% |
!! | TGTAGTGAGTGCTGAAACGA+CGG | - | chr3.3:8576395-8576414 | MS.gene069321:CDS | 45.0% |
AATGGGTGGGACATCAATGG+GGG | + | chr3.3:8575818-8575837 | None:intergenic | 50.0% | |
ATCCAGGTCAAGAAGGAGGA+GGG | - | chr3.3:8576688-8576707 | MS.gene069321:CDS | 50.0% | |
CAATGGGTGGGACATCAATG+GGG | + | chr3.3:8575819-8575838 | None:intergenic | 50.0% | |
GACAATGGGTGGGACATCAA+TGG | + | chr3.3:8575821-8575840 | None:intergenic | 50.0% | |
GACCTGAGAGGGGATAGAAA+TGG | + | chr3.3:8575675-8575694 | None:intergenic | 50.0% | |
GAGTCTTCGATTGGGGGATA+TGG | + | chr3.3:8575490-8575509 | None:intergenic | 50.0% | |
GTAACAAGACGACCTGAGAG+GGG | + | chr3.3:8575685-8575704 | None:intergenic | 50.0% | |
TATCCAGGTCAAGAAGGAGG+AGG | - | chr3.3:8576687-8576706 | MS.gene069321:CDS | 50.0% | |
TGCTTAGGTCGGTTGAAGAG+TGG | - | chr3.3:8576499-8576518 | MS.gene069321:CDS | 50.0% | |
! | ATGATCTAGGATGGGCAGCA+TGG | - | chr3.3:8576436-8576455 | MS.gene069321:CDS | 50.0% |
! | CATGCACGTCGACTACAACA+GGG | - | chr3.3:8576285-8576304 | MS.gene069321:CDS | 50.0% |
! | TCATGCACGTCGACTACAAC+AGG | - | chr3.3:8576284-8576303 | MS.gene069321:CDS | 50.0% |
AACGACGGTAGGAGAGTTGC+TGG | - | chr3.3:8576410-8576429 | MS.gene069321:CDS | 55.0% | |
!! | GTGAGTGCTGAAACGACGGT+AGG | - | chr3.3:8576399-8576418 | MS.gene069321:CDS | 55.0% |
CTCCCTCCTCCTTCTTGACC+TGG | + | chr3.3:8576693-8576712 | None:intergenic | 60.0% | |
GTGGGACATCAATGGGGGTG+AGG | + | chr3.3:8575813-8575832 | None:intergenic | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr3.3 | gene | 8575442 | 8576812 | 8575442 | ID=MS.gene069321 |
chr3.3 | mRNA | 8575442 | 8576812 | 8575442 | ID=MS.gene069321.t1;Parent=MS.gene069321 |
chr3.3 | exon | 8575442 | 8576812 | 8575442 | ID=MS.gene069321.t1.exon1;Parent=MS.gene069321.t1 |
chr3.3 | CDS | 8575442 | 8576812 | 8575442 | ID=cds.MS.gene069321.t1;Parent=MS.gene069321.t1 |
Gene Sequence |
Protein sequence |