Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene38702.t1 | XP_003603067.1 | 92.1 | 456 | 36 | 0 | 1 | 456 | 1 | 456 | 1.10E-252 | 882.1 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene38702.t1 | Q9SND9 | 35.8 | 450 | 264 | 13 | 6 | 445 | 4 | 438 | 3.3e-64 | 247.3 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene38702.t1 | G7J6X4 | 92.1 | 456 | 36 | 0 | 1 | 456 | 1 | 456 | 8.0e-253 | 882.1 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene050605 | MS.gene38702 | 0.808518 | 2.98E-50 | -1.69E-46 |
MS.gene051368 | MS.gene38702 | 0.807623 | 4.62E-50 | -1.69E-46 |
MS.gene057208 | MS.gene38702 | 0.813307 | 2.73E-51 | -1.69E-46 |
MS.gene060011 | MS.gene38702 | 0.810893 | 9.19E-51 | -1.69E-46 |
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene38702.t1 | MTR_3g101960 | 92.105 | 456 | 36 | 0 | 1 | 456 | 1 | 456 | 0.0 | 887 |
MS.gene38702.t1 | MTR_3g102020 | 85.650 | 446 | 63 | 1 | 1 | 445 | 1 | 446 | 0.0 | 807 |
MS.gene38702.t1 | MTR_3g101970 | 86.547 | 446 | 45 | 2 | 1 | 445 | 1 | 432 | 0.0 | 799 |
MS.gene38702.t1 | MTR_3g102010 | 80.401 | 449 | 80 | 2 | 1 | 445 | 2 | 446 | 0.0 | 751 |
MS.gene38702.t1 | MTR_3g101900 | 68.374 | 449 | 131 | 4 | 1 | 445 | 2 | 443 | 0.0 | 625 |
MS.gene38702.t1 | MTR_3g101930 | 67.489 | 446 | 131 | 5 | 9 | 445 | 10 | 450 | 0.0 | 617 |
MS.gene38702.t1 | MTR_3g102030 | 74.528 | 318 | 55 | 2 | 86 | 403 | 29 | 320 | 4.76e-173 | 488 |
MS.gene38702.t1 | MTR_4g015180 | 40.404 | 495 | 224 | 11 | 5 | 445 | 5 | 482 | 1.03e-101 | 312 |
MS.gene38702.t1 | MTR_3g070170 | 38.969 | 485 | 222 | 14 | 5 | 445 | 11 | 465 | 2.55e-100 | 308 |
MS.gene38702.t1 | MTR_5g081960 | 38.540 | 493 | 229 | 12 | 8 | 445 | 8 | 481 | 3.08e-94 | 293 |
MS.gene38702.t1 | MTR_4g094842 | 38.512 | 457 | 253 | 11 | 3 | 445 | 1 | 443 | 7.53e-92 | 286 |
MS.gene38702.t1 | MTR_4g022720 | 39.535 | 430 | 240 | 9 | 21 | 445 | 16 | 430 | 5.79e-85 | 268 |
MS.gene38702.t1 | MTR_4g022800 | 37.900 | 438 | 243 | 12 | 21 | 445 | 16 | 437 | 3.04e-84 | 266 |
MS.gene38702.t1 | MTR_4g094835 | 37.939 | 427 | 246 | 7 | 25 | 445 | 28 | 441 | 3.29e-84 | 266 |
MS.gene38702.t1 | MTR_8g041770 | 38.810 | 420 | 241 | 10 | 29 | 445 | 30 | 436 | 8.26e-84 | 265 |
MS.gene38702.t1 | MTR_4g094838 | 37.701 | 435 | 232 | 9 | 29 | 454 | 28 | 432 | 1.14e-83 | 264 |
MS.gene38702.t1 | MTR_0190s0020 | 37.678 | 422 | 247 | 9 | 28 | 445 | 28 | 437 | 3.27e-82 | 261 |
MS.gene38702.t1 | MTR_4g022670 | 37.385 | 436 | 247 | 10 | 21 | 445 | 16 | 436 | 1.44e-80 | 256 |
MS.gene38702.t1 | MTR_4g022825 | 36.613 | 437 | 250 | 10 | 20 | 445 | 15 | 435 | 1.15e-79 | 254 |
MS.gene38702.t1 | MTR_3g088420 | 36.636 | 434 | 241 | 10 | 23 | 445 | 18 | 428 | 2.13e-78 | 250 |
MS.gene38702.t1 | MTR_7g026860 | 37.071 | 437 | 244 | 12 | 21 | 445 | 16 | 433 | 1.27e-76 | 246 |
MS.gene38702.t1 | MTR_4g094828 | 36.343 | 443 | 246 | 14 | 8 | 431 | 6 | 431 | 4.07e-76 | 245 |
MS.gene38702.t1 | MTR_4g022290 | 35.154 | 421 | 239 | 10 | 23 | 429 | 24 | 424 | 3.18e-74 | 240 |
MS.gene38702.t1 | MTR_3g026310 | 37.705 | 427 | 232 | 13 | 29 | 437 | 24 | 434 | 1.06e-73 | 239 |
MS.gene38702.t1 | MTR_4g094832 | 39.216 | 357 | 198 | 7 | 105 | 454 | 86 | 430 | 2.88e-70 | 229 |
MS.gene38702.t1 | MTR_8g079710 | 36.235 | 425 | 238 | 15 | 21 | 431 | 21 | 426 | 8.12e-70 | 228 |
MS.gene38702.t1 | MTR_4g022760 | 35.219 | 389 | 217 | 11 | 21 | 386 | 16 | 392 | 4.17e-63 | 209 |
MS.gene38702.t1 | MTR_6g045553 | 32.083 | 480 | 265 | 14 | 5 | 445 | 13 | 470 | 8.02e-60 | 203 |
MS.gene38702.t1 | MTR_6g016815 | 29.505 | 444 | 226 | 14 | 5 | 445 | 17 | 376 | 4.38e-40 | 148 |
MS.gene38702.t1 | MTR_8g040780 | 36.123 | 227 | 136 | 4 | 234 | 452 | 14 | 239 | 3.60e-39 | 142 |
MS.gene38702.t1 | MTR_8g075610 | 27.250 | 400 | 232 | 15 | 68 | 440 | 47 | 414 | 1.83e-30 | 122 |
MS.gene38702.t1 | MTR_4g007540 | 25.536 | 466 | 275 | 20 | 6 | 440 | 3 | 427 | 1.75e-29 | 120 |
MS.gene38702.t1 | MTR_2g064495 | 26.633 | 398 | 240 | 14 | 68 | 440 | 56 | 426 | 1.58e-28 | 117 |
MS.gene38702.t1 | MTR_7g026770 | 38.418 | 177 | 88 | 3 | 155 | 331 | 132 | 287 | 2.18e-28 | 114 |
MS.gene38702.t1 | MTR_2g105330 | 26.382 | 398 | 241 | 14 | 68 | 440 | 56 | 426 | 4.34e-28 | 115 |
MS.gene38702.t1 | MTR_7g026850 | 42.282 | 149 | 75 | 4 | 43 | 190 | 21 | 159 | 1.11e-27 | 108 |
MS.gene38702.t1 | MTR_8g096530 | 30.818 | 318 | 183 | 13 | 62 | 362 | 53 | 350 | 7.66e-27 | 112 |
MS.gene38702.t1 | MTR_3g049150 | 27.578 | 417 | 248 | 17 | 56 | 440 | 46 | 440 | 1.72e-26 | 111 |
MS.gene38702.t1 | MTR_3g098980 | 29.153 | 295 | 184 | 10 | 62 | 345 | 60 | 340 | 4.59e-25 | 107 |
MS.gene38702.t1 | MTR_8g040760 | 33.180 | 217 | 134 | 6 | 8 | 223 | 6 | 212 | 7.87e-25 | 102 |
MS.gene38702.t1 | MTR_6g053810 | 30.526 | 285 | 184 | 10 | 68 | 344 | 71 | 349 | 1.19e-23 | 103 |
MS.gene38702.t1 | MTR_4g094825 | 34.286 | 175 | 100 | 3 | 280 | 454 | 232 | 391 | 1.88e-23 | 102 |
MS.gene38702.t1 | MTR_4g094825 | 32.308 | 195 | 115 | 6 | 29 | 220 | 92 | 272 | 6.29e-21 | 94.7 |
MS.gene38702.t1 | MTR_3g026950 | 25.059 | 427 | 249 | 17 | 62 | 445 | 48 | 446 | 3.95e-23 | 101 |
MS.gene38702.t1 | MTR_5g076700 | 25.813 | 461 | 280 | 19 | 4 | 436 | 5 | 431 | 4.51e-23 | 101 |
MS.gene38702.t1 | MTR_4g127650 | 25.217 | 460 | 258 | 19 | 19 | 436 | 30 | 445 | 6.18e-23 | 101 |
MS.gene38702.t1 | MTR_4g097090 | 26.238 | 404 | 238 | 15 | 64 | 431 | 61 | 440 | 7.73e-23 | 100 |
MS.gene38702.t1 | MTR_6g034495 | 43.478 | 115 | 61 | 3 | 82 | 193 | 48 | 161 | 5.44e-22 | 92.8 |
MS.gene38702.t1 | MTR_7g114470 | 25.935 | 428 | 271 | 17 | 33 | 436 | 28 | 433 | 4.33e-21 | 95.9 |
MS.gene38702.t1 | MTR_3g112180 | 27.157 | 394 | 250 | 13 | 18 | 399 | 22 | 390 | 4.46e-21 | 95.9 |
MS.gene38702.t1 | MTR_1g040175 | 27.688 | 372 | 222 | 17 | 65 | 419 | 61 | 402 | 3.21e-20 | 93.2 |
MS.gene38702.t1 | MTR_7g027175 | 27.586 | 319 | 204 | 12 | 56 | 362 | 56 | 359 | 1.89e-19 | 90.9 |
MS.gene38702.t1 | MTR_7g114550 | 26.097 | 433 | 268 | 19 | 30 | 436 | 24 | 430 | 5.34e-19 | 89.7 |
MS.gene38702.t1 | MTR_3g465980 | 25.723 | 346 | 219 | 13 | 6 | 334 | 10 | 334 | 1.38e-18 | 88.2 |
MS.gene38702.t1 | MTR_1g081660 | 26.923 | 390 | 246 | 15 | 65 | 437 | 70 | 437 | 1.53e-18 | 88.2 |
MS.gene38702.t1 | MTR_6g034485 | 37.607 | 117 | 66 | 2 | 205 | 317 | 2 | 115 | 2.47e-18 | 81.3 |
MS.gene38702.t1 | MTR_1g040195 | 27.431 | 401 | 232 | 17 | 30 | 418 | 23 | 376 | 4.51e-18 | 86.7 |
MS.gene38702.t1 | MTR_1g040215 | 27.714 | 350 | 212 | 15 | 13 | 347 | 16 | 339 | 1.37e-17 | 85.1 |
MS.gene38702.t1 | MTR_4g013050 | 24.161 | 447 | 245 | 18 | 20 | 440 | 25 | 403 | 2.44e-17 | 84.3 |
MS.gene38702.t1 | MTR_4g055170 | 25.267 | 281 | 183 | 8 | 68 | 334 | 69 | 336 | 7.00e-17 | 83.2 |
MS.gene38702.t1 | MTR_3g465990 | 24.781 | 343 | 226 | 12 | 6 | 334 | 10 | 334 | 7.74e-17 | 82.8 |
MS.gene38702.t1 | MTR_7g114490 | 25.799 | 438 | 273 | 19 | 30 | 441 | 24 | 435 | 1.31e-16 | 82.4 |
MS.gene38702.t1 | MTR_7g086000 | 26.582 | 395 | 242 | 19 | 72 | 433 | 64 | 443 | 5.77e-16 | 80.5 |
MS.gene38702.t1 | MTR_7g084940 | 25.000 | 312 | 203 | 10 | 64 | 360 | 65 | 360 | 5.78e-16 | 80.1 |
MS.gene38702.t1 | MTR_7g114960 | 25.126 | 398 | 267 | 12 | 65 | 445 | 60 | 443 | 1.17e-15 | 79.3 |
MS.gene38702.t1 | MTR_3g465930 | 27.338 | 278 | 176 | 9 | 68 | 331 | 69 | 334 | 1.24e-15 | 79.3 |
MS.gene38702.t1 | MTR_7g026830 | 50.000 | 70 | 34 | 1 | 111 | 179 | 28 | 97 | 6.64e-15 | 70.9 |
MS.gene38702.t1 | MTR_3g028210 | 23.158 | 475 | 292 | 18 | 6 | 436 | 8 | 453 | 3.17e-14 | 75.1 |
MS.gene38702.t1 | MTR_3g465910 | 26.481 | 287 | 163 | 9 | 69 | 331 | 69 | 331 | 7.80e-14 | 73.9 |
MS.gene38702.t1 | MTR_2g045540 | 36.364 | 88 | 48 | 1 | 242 | 329 | 27 | 106 | 1.44e-13 | 67.4 |
MS.gene38702.t1 | MTR_2g015430 | 25.902 | 305 | 200 | 11 | 72 | 368 | 62 | 348 | 2.44e-13 | 72.0 |
MS.gene38702.t1 | MTR_3g465950 | 27.273 | 275 | 179 | 8 | 69 | 331 | 69 | 334 | 2.93e-13 | 72.0 |
MS.gene38702.t1 | MTR_0502s0010 | 30.579 | 242 | 140 | 12 | 111 | 337 | 2 | 230 | 2.93e-13 | 69.7 |
MS.gene38702.t1 | MTR_3g049140 | 25.616 | 203 | 135 | 4 | 242 | 431 | 27 | 226 | 6.17e-13 | 68.9 |
MS.gene38702.t1 | MTR_7g014250 | 24.029 | 412 | 241 | 15 | 29 | 397 | 26 | 408 | 7.44e-13 | 70.5 |
MS.gene38702.t1 | MTR_6g015320 | 23.165 | 436 | 286 | 16 | 29 | 436 | 29 | 443 | 1.43e-12 | 69.7 |
MS.gene38702.t1 | MTR_5g090830 | 24.149 | 323 | 193 | 15 | 48 | 342 | 49 | 347 | 4.21e-12 | 68.2 |
MS.gene38702.t1 | MTR_8g079970 | 25.723 | 346 | 202 | 15 | 6 | 330 | 3 | 314 | 7.67e-12 | 67.4 |
MS.gene38702.t1 | MTR_5g090810 | 24.138 | 319 | 198 | 15 | 48 | 342 | 49 | 347 | 2.02e-11 | 66.2 |
MS.gene38702.t1 | MTR_7g014620 | 21.918 | 438 | 291 | 19 | 29 | 441 | 15 | 426 | 2.67e-11 | 65.9 |
MS.gene38702.t1 | MTR_7g014630 | 30.337 | 178 | 114 | 6 | 14 | 188 | 15 | 185 | 8.71e-11 | 63.9 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene38702.t1 | AT5G42830 | 57.273 | 440 | 172 | 3 | 13 | 445 | 14 | 444 | 0.0 | 521 |
MS.gene38702.t1 | AT5G07850 | 54.649 | 441 | 199 | 1 | 6 | 445 | 8 | 448 | 0.0 | 514 |
MS.gene38702.t1 | AT5G07860 | 53.829 | 444 | 194 | 5 | 6 | 445 | 8 | 444 | 1.63e-167 | 479 |
MS.gene38702.t1 | AT5G07870 | 50.552 | 453 | 207 | 3 | 6 | 445 | 8 | 456 | 6.76e-163 | 468 |
MS.gene38702.t1 | AT2G39980 | 40.164 | 488 | 204 | 12 | 17 | 445 | 17 | 475 | 2.01e-103 | 317 |
MS.gene38702.t1 | AT5G67150 | 39.294 | 453 | 242 | 11 | 8 | 445 | 7 | 441 | 1.21e-96 | 298 |
MS.gene38702.t1 | AT5G01210 | 39.666 | 479 | 232 | 11 | 5 | 445 | 5 | 464 | 5.52e-95 | 295 |
MS.gene38702.t1 | AT3G50270 | 35.491 | 448 | 267 | 11 | 8 | 445 | 8 | 443 | 3.42e-80 | 256 |
MS.gene38702.t1 | AT3G50280 | 35.449 | 457 | 270 | 13 | 3 | 449 | 1 | 442 | 1.57e-78 | 251 |
MS.gene38702.t1 | AT3G50300 | 34.713 | 435 | 263 | 9 | 6 | 432 | 4 | 425 | 4.87e-76 | 245 |
MS.gene38702.t1 | AT5G38130 | 34.703 | 438 | 265 | 11 | 2 | 432 | 20 | 443 | 9.91e-73 | 236 |
MS.gene38702.t1 | AT5G67160 | 34.899 | 447 | 262 | 14 | 6 | 446 | 5 | 428 | 6.00e-69 | 226 |
MS.gene38702.t1 | AT5G23940 | 33.698 | 457 | 274 | 12 | 6 | 445 | 3 | 447 | 3.84e-66 | 220 |
MS.gene38702.t1 | AT3G50280 | 38.710 | 310 | 175 | 8 | 144 | 445 | 6 | 308 | 6.07e-56 | 188 |
MS.gene38702.t1 | AT3G50290 | 39.382 | 259 | 144 | 6 | 147 | 396 | 15 | 269 | 6.53e-46 | 160 |
MS.gene38702.t1 | AT5G48930 | 26.856 | 458 | 279 | 18 | 6 | 440 | 3 | 427 | 4.79e-32 | 127 |
MS.gene38702.t1 | AT2G19070 | 27.765 | 443 | 258 | 19 | 29 | 436 | 25 | 440 | 9.47e-30 | 121 |
MS.gene38702.t1 | AT5G41040 | 29.392 | 296 | 185 | 9 | 62 | 345 | 63 | 346 | 1.41e-25 | 108 |
MS.gene38702.t1 | AT5G41040 | 29.236 | 301 | 179 | 11 | 62 | 345 | 79 | 362 | 1.98e-25 | 108 |
MS.gene38702.t1 | AT3G48720 | 27.964 | 329 | 204 | 13 | 18 | 334 | 18 | 325 | 9.36e-22 | 97.8 |
MS.gene38702.t1 | AT2G40230 | 27.200 | 375 | 214 | 14 | 63 | 409 | 54 | 397 | 2.02e-19 | 90.5 |
MS.gene38702.t1 | AT5G63560 | 27.095 | 358 | 218 | 14 | 18 | 361 | 19 | 347 | 4.37e-19 | 89.7 |
MS.gene38702.t1 | AT1G28680 | 26.136 | 352 | 214 | 13 | 72 | 413 | 66 | 381 | 1.39e-17 | 84.7 |
MS.gene38702.t1 | AT1G31490 | 25.791 | 411 | 254 | 19 | 58 | 446 | 52 | 433 | 3.01e-17 | 84.3 |
MS.gene38702.t1 | AT1G28680 | 24.581 | 358 | 243 | 12 | 3 | 350 | 1 | 341 | 3.67e-17 | 84.0 |
MS.gene38702.t1 | AT5G57840 | 24.706 | 425 | 284 | 16 | 28 | 436 | 23 | 427 | 6.78e-17 | 83.2 |
MS.gene38702.t1 | AT1G78990 | 24.183 | 306 | 197 | 11 | 48 | 342 | 52 | 333 | 6.84e-17 | 83.2 |
MS.gene38702.t1 | AT2G25150 | 27.000 | 300 | 187 | 12 | 61 | 344 | 60 | 343 | 4.73e-14 | 74.3 |
MS.gene38702.t1 | AT5G16410 | 24.138 | 290 | 185 | 10 | 66 | 342 | 89 | 356 | 4.25e-13 | 71.6 |
MS.gene38702.t1 | AT1G65450 | 26.882 | 186 | 114 | 6 | 166 | 335 | 1 | 180 | 1.49e-11 | 65.5 |
MS.gene38702.t1 | AT5G39090 | 22.414 | 464 | 305 | 18 | 4 | 439 | 3 | 439 | 2.11e-11 | 66.2 |
MS.gene38702.t1 | AT3G29590 | 22.296 | 453 | 309 | 14 | 5 | 436 | 7 | 437 | 5.00e-11 | 65.1 |
Find 111 sgRNAs with CRISPR-Local
Find 120 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CCTCTTCCTAAAGAATATTT+TGG | 0.084733 | 3.3:-84368717 | MS.gene38702:CDS |
CAAAATGATGTTCCTATTTA+TGG | 0.092923 | 3.3:-84369062 | MS.gene38702:CDS |
TAAAATGGGTGTTTCGTATC+TGG | 0.174039 | 3.3:+84368944 | None:intergenic |
GAAGATTCTCTCTCTTAAAA+TGG | 0.174060 | 3.3:+84368929 | None:intergenic |
AATCTTTATCAGCATTAATT+TGG | 0.192660 | 3.3:-84368827 | MS.gene38702:CDS |
TTGAATGGAAGGTTGATAAT+TGG | 0.293176 | 3.3:+84368987 | None:intergenic |
TCACCAAGGTTTAATATGTA+TGG | 0.306646 | 3.3:-84368489 | MS.gene38702:CDS |
ATTTGCTTTGAGTCTTTGAT+TGG | 0.309010 | 3.3:+84369581 | None:intergenic |
CTATAGACTCAGCTGGAAAA+TGG | 0.328484 | 3.3:+84368907 | None:intergenic |
AACATGCAGAAACGATGTTT+AGG | 0.345991 | 3.3:+84369621 | None:intergenic |
GAATTCCCAAAATATTCTTT+AGG | 0.346933 | 3.3:+84368711 | None:intergenic |
AATATGTATGGGAATGAATT+CGG | 0.348276 | 3.3:-84368477 | MS.gene38702:CDS |
TGTGAAATGGGACCATAAAT+AGG | 0.363426 | 3.3:+84369050 | None:intergenic |
AGATGGTTTCCACAAGGTTA+TGG | 0.364094 | 3.3:-84369011 | MS.gene38702:CDS |
ACAATGGGTGGGACATCAAT+GGG | 0.389297 | 3.3:+84369260 | None:intergenic |
TTTGCTTTGAGTCTTTGATT+GGG | 0.393523 | 3.3:+84369582 | None:intergenic |
ATCACCAATACAATGATTCA+TGG | 0.399519 | 3.3:+84369130 | None:intergenic |
GCCAGAGAAAATGATGTTGC+TGG | 0.399927 | 3.3:-84368340 | MS.gene38702:CDS |
ATGGATAGGTTGATGTGAAA+TGG | 0.405959 | 3.3:+84369037 | None:intergenic |
TTGGTGATGGAACAGCTTAT+TGG | 0.406142 | 3.3:-84369115 | MS.gene38702:CDS |
GGATATGCTAACAAATTTGA+TGG | 0.406437 | 3.3:-84368426 | MS.gene38702:CDS |
TTCCATTATTATCCCCTCTC+AGG | 0.414564 | 3.3:-84369407 | MS.gene38702:CDS |
TGATCCTTACACTGTTATGA+TGG | 0.415418 | 3.3:-84368517 | MS.gene38702:CDS |
CCAAAATATTCTTTAGGAAG+AGG | 0.417262 | 3.3:+84368717 | None:intergenic |
ACATGCAGAAACGATGTTTA+GGG | 0.418061 | 3.3:+84369622 | None:intergenic |
CAGATGAAGAGTTCAACTTC+TGG | 0.424021 | 3.3:-84368314 | MS.gene38702:CDS |
AATATGTTATTTAACACATT+GGG | 0.426446 | 3.3:-84369561 | MS.gene38702:CDS |
GGTTCTCAATGAAATGTTGT+TGG | 0.429365 | 3.3:+84369468 | None:intergenic |
AAAATGGGTGTTTCGTATCT+GGG | 0.430898 | 3.3:+84368945 | None:intergenic |
CTTGTGGAAACCATCTATTA+TGG | 0.431161 | 3.3:+84369018 | None:intergenic |
GGAGAGAACAACTTGCAAAA+TGG | 0.431719 | 3.3:-84368769 | MS.gene38702:CDS |
ATCAACCTATCCATAATAGA+TGG | 0.438483 | 3.3:-84369028 | MS.gene38702:CDS |
AATGGAAAAGTGTGAGAGAA+AGG | 0.440646 | 3.3:+84369423 | None:intergenic |
CTTCCTCCTCCTTCTTGACC+TGG | 0.449239 | 3.3:+84368387 | None:intergenic |
AACGACGGTAGGGGAATTGC+TGG | 0.449956 | 3.3:-84368667 | MS.gene38702:CDS |
TGTTGGTTTAGTGATGTTGT+TGG | 0.451176 | 3.3:+84369485 | None:intergenic |
TATTCAAGTCACGGAATTAG+TGG | 0.453345 | 3.3:-84369174 | MS.gene38702:CDS |
ATCTACACACTATATCCAAA+AGG | 0.455900 | 3.3:-84369525 | MS.gene38702:CDS |
GACAATGGGTGGGACATCAA+TGG | 0.465845 | 3.3:+84369259 | None:intergenic |
AAGATTCTCTCTCTTAAAAT+GGG | 0.467841 | 3.3:+84368930 | None:intergenic |
GAGGTGGTTCCATTCTCGTT+CGG | 0.474421 | 3.3:+84368736 | None:intergenic |
TCAAAGAACGATTGGACAAT+GGG | 0.480071 | 3.3:+84369245 | None:intergenic |
TGTTCCATGAATCATTGTAT+TGG | 0.480232 | 3.3:-84369134 | MS.gene38702:CDS |
TATGGGAATGAATTCGGAAT+GGG | 0.482191 | 3.3:-84368471 | MS.gene38702:CDS |
AACTCATCGTGATGTTTGAA+TGG | 0.482751 | 3.3:+84368972 | None:intergenic |
CTACCCATCATAACAGTGTA+AGG | 0.483421 | 3.3:+84368513 | None:intergenic |
TTGCTTTGAGTCTTTGATTG+GGG | 0.486605 | 3.3:+84369583 | None:intergenic |
AGTTTCGCTATAGACTCAGC+TGG | 0.493398 | 3.3:+84368900 | None:intergenic |
CACAAAGCAGTCAGCCATGA+TGG | 0.494201 | 3.3:-84369218 | MS.gene38702:CDS |
GAATTGCTGGAGAATGATCT+AGG | 0.495485 | 3.3:-84368654 | MS.gene38702:CDS |
AAATATGTTATTTAACACAT+TGG | 0.495981 | 3.3:-84369562 | MS.gene38702:CDS |
CACCAAGGTTTAATATGTAT+GGG | 0.497351 | 3.3:-84368488 | MS.gene38702:CDS |
TACAAACAACCGAACGAGAA+TGG | 0.497668 | 3.3:-84368745 | MS.gene38702:CDS |
GACCTGAGAGGGGATAATAA+TGG | 0.500614 | 3.3:+84369405 | None:intergenic |
TTCCCATACATATTAAACCT+TGG | 0.501336 | 3.3:+84368486 | None:intergenic |
GTGCACGTCAACTACAACAC+CGG | 0.505056 | 3.3:-84368791 | MS.gene38702:CDS |
TGGATAGGTTGATGTGAAAT+GGG | 0.510183 | 3.3:+84369038 | None:intergenic |
TGCGGTGAGTGCTGAAACGA+CGG | 0.510373 | 3.3:-84368682 | MS.gene38702:CDS |
CAATGGGTGGGACATCAATG+GGG | 0.513002 | 3.3:+84369261 | None:intergenic |
TTTGTTATCTATTCAAGTCA+CGG | 0.519202 | 3.3:-84369183 | MS.gene38702:CDS |
TGCTTTGAGTCTTTGATTGG+GGG | 0.522475 | 3.3:+84369584 | None:intergenic |
TGCTGGAGAATGATCTAGGA+TGG | 0.523136 | 3.3:-84368650 | MS.gene38702:CDS |
AAATCTGTTTGATACACAAA+AGG | 0.526852 | 3.3:+84368546 | None:intergenic |
ATGAATCATTGTATTGGTGA+TGG | 0.530598 | 3.3:-84369128 | MS.gene38702:CDS |
TGTGATGGTCAAAGAACGAT+TGG | 0.541390 | 3.3:+84369237 | None:intergenic |
CATCGTGATGTTTGAATGGA+AGG | 0.541756 | 3.3:+84368976 | None:intergenic |
GGAAAAGTAACATCATATCC+AGG | 0.542909 | 3.3:-84368405 | MS.gene38702:CDS |
GATCCTTACACTGTTATGAT+GGG | 0.549602 | 3.3:-84368516 | MS.gene38702:CDS |
AGTAACAAGACGACCTGAGA+GGG | 0.549751 | 3.3:+84369394 | None:intergenic |
GCATGAATAAATTTACCTCC+AGG | 0.549837 | 3.3:+84369317 | None:intergenic |
GGAAACCATCTATTATGGAT+AGG | 0.550853 | 3.3:+84369023 | None:intergenic |
ACGAAAACAGTGTAAGAATG+AGG | 0.552044 | 3.3:+84369356 | None:intergenic |
TGAGTGCTGAAACGACGGTA+GGG | 0.561903 | 3.3:-84368677 | MS.gene38702:CDS |
AATGGGTGGGACATCAATGG+GGG | 0.568371 | 3.3:+84369262 | None:intergenic |
GTATGGGAATGAATTCGGAA+TGG | 0.568846 | 3.3:-84368472 | MS.gene38702:CDS |
ATGATCTAGGATGGGCAGCA+TGG | 0.569534 | 3.3:-84368641 | MS.gene38702:CDS |
GTCAAAGAACGATTGGACAA+TGG | 0.570569 | 3.3:+84369244 | None:intergenic |
AGTAAATCATGATGATATAG+TGG | 0.571996 | 3.3:-84368601 | MS.gene38702:CDS |
TCTACACACTATATCCAAAA+GGG | 0.572382 | 3.3:-84369524 | MS.gene38702:CDS |
AAATATTCTTTAGGAAGAGG+TGG | 0.572893 | 3.3:+84368720 | None:intergenic |
CATGGCTGACTGCTTTGTGA+TGG | 0.574372 | 3.3:+84369222 | None:intergenic |
TGTGTAGGTCGGTTGAAGAG+TGG | 0.574581 | 3.3:-84368578 | MS.gene38702:CDS |
AAAGCTTTAGCAGTTAGAAG+TGG | 0.578010 | 3.3:-84368447 | MS.gene38702:CDS |
GAGTGCTGAAACGACGGTAG+GGG | 0.585903 | 3.3:-84368676 | MS.gene38702:CDS |
ACATCATATCCAGGTCAAGA+AGG | 0.586316 | 3.3:-84368396 | MS.gene38702:CDS |
CAGAAACGATGTTTAGGGAA+GGG | 0.589656 | 3.3:+84369627 | None:intergenic |
TGCACGTCAACTACAACACC+GGG | 0.595711 | 3.3:-84368790 | MS.gene38702:CDS |
ACATTTCATTGAGAACCTTG+TGG | 0.604788 | 3.3:-84369462 | MS.gene38702:CDS |
GCAGAAACGATGTTTAGGGA+AGG | 0.605789 | 3.3:+84369626 | None:intergenic |
GTGAGTGCTGAAACGACGGT+AGG | 0.605829 | 3.3:-84368678 | MS.gene38702:CDS |
TGATATAGTGGTGTGTAGGT+CGG | 0.607347 | 3.3:-84368589 | MS.gene38702:CDS |
CAAGTCACGGAATTAGTGGA+TGG | 0.611468 | 3.3:-84369170 | MS.gene38702:CDS |
ATACTCAAAGACTAGAACAT+GGG | 0.612835 | 3.3:+84368283 | None:intergenic |
AAGAACGATTGGACAATGGG+TGG | 0.614907 | 3.3:+84369248 | None:intergenic |
CATACTCAAAGACTAGAACA+TGG | 0.617067 | 3.3:+84368282 | None:intergenic |
AGAACGATTGGACAATGGGT+GGG | 0.617288 | 3.3:+84369249 | None:intergenic |
CGAAAACAGTGTAAGAATGA+GGG | 0.618698 | 3.3:+84369357 | None:intergenic |
GATATAGTGTGTAGATAACA+TGG | 0.622938 | 3.3:+84369532 | None:intergenic |
TATCCAGGTCAAGAAGGAGG+AGG | 0.624408 | 3.3:-84368390 | MS.gene38702:CDS |
GCTGGAGAATGATCTAGGAT+GGG | 0.628974 | 3.3:-84368649 | MS.gene38702:CDS |
AGTGTTTGAGTTTCTCCACA+AGG | 0.632277 | 3.3:+84369447 | None:intergenic |
CATAATAGATGGTTTCCACA+AGG | 0.639213 | 3.3:-84369017 | MS.gene38702:CDS |
ATAATTGGACCATAACCTTG+TGG | 0.645522 | 3.3:+84369002 | None:intergenic |
TATAGCGAAACTGAAAGCAA+AGG | 0.650352 | 3.3:-84368889 | MS.gene38702:CDS |
AAGACATGGTGTGACCATCA+TGG | 0.662753 | 3.3:+84369204 | None:intergenic |
TCATATCCAGGTCAAGAAGG+AGG | 0.665076 | 3.3:-84368393 | MS.gene38702:CDS |
ATGATGATATAGTGGTGTGT+AGG | 0.672280 | 3.3:-84368593 | MS.gene38702:CDS |
TAGTAACAAGACGACCTGAG+AGG | 0.695039 | 3.3:+84369393 | None:intergenic |
TTGAATAGATAACAAAGACA+TGG | 0.705301 | 3.3:+84369190 | None:intergenic |
TTATGATGGGTAGTTCACCA+AGG | 0.706961 | 3.3:-84368503 | MS.gene38702:CDS |
GTAACAAGACGACCTGAGAG+GGG | 0.714877 | 3.3:+84369395 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | AAATATGTTATTTAACACAT+TGG | - | chr3.3:84368360-84368379 | MS.gene38702:CDS | 15.0% |
!!! | AATATGTTATTTAACACATT+GGG | - | chr3.3:84368361-84368380 | MS.gene38702:CDS | 15.0% |
!! | AATCTTTATCAGCATTAATT+TGG | - | chr3.3:84369095-84369114 | MS.gene38702:CDS | 20.0% |
! | AAATCTGTTTGATACACAAA+AGG | + | chr3.3:84369379-84369398 | None:intergenic | 25.0% |
! | AAGATTCTCTCTCTTAAAAT+GGG | + | chr3.3:84368995-84369014 | None:intergenic | 25.0% |
! | AATATGTATGGGAATGAATT+CGG | - | chr3.3:84369445-84369464 | MS.gene38702:CDS | 25.0% |
! | AGTAAATCATGATGATATAG+TGG | - | chr3.3:84369321-84369340 | MS.gene38702:CDS | 25.0% |
! | CAAAATGATGTTCCTATTTA+TGG | - | chr3.3:84368860-84368879 | MS.gene38702:CDS | 25.0% |
! | GAATTCCCAAAATATTCTTT+AGG | + | chr3.3:84369214-84369233 | None:intergenic | 25.0% |
! | TTGAATAGATAACAAAGACA+TGG | + | chr3.3:84368735-84368754 | None:intergenic | 25.0% |
!! | CTCTTCCTAAAGAATATTTT+GGG | - | chr3.3:84369206-84369225 | MS.gene38702:CDS | 25.0% |
!! | TTTGTTATCTATTCAAGTCA+CGG | - | chr3.3:84368739-84368758 | MS.gene38702:CDS | 25.0% |
ATCAACCTATCCATAATAGA+TGG | - | chr3.3:84368894-84368913 | MS.gene38702:CDS | 30.0% | |
ATCACCAATACAATGATTCA+TGG | + | chr3.3:84368795-84368814 | None:intergenic | 30.0% | |
ATCTACACACTATATCCAAA+AGG | - | chr3.3:84368397-84368416 | MS.gene38702:CDS | 30.0% | |
CACCAAGGTTTAATATGTAT+GGG | - | chr3.3:84369434-84369453 | MS.gene38702:CDS | 30.0% | |
GAAGATTCTCTCTCTTAAAA+TGG | + | chr3.3:84368996-84369015 | None:intergenic | 30.0% | |
GATATAGTGTGTAGATAACA+TGG | + | chr3.3:84368393-84368412 | None:intergenic | 30.0% | |
GGATATGCTAACAAATTTGA+TGG | - | chr3.3:84369496-84369515 | MS.gene38702:CDS | 30.0% | |
TCACCAAGGTTTAATATGTA+TGG | - | chr3.3:84369433-84369452 | MS.gene38702:CDS | 30.0% | |
TCTACACACTATATCCAAAA+GGG | - | chr3.3:84368398-84368417 | MS.gene38702:CDS | 30.0% | |
TGTTCCATGAATCATTGTAT+TGG | - | chr3.3:84368788-84368807 | MS.gene38702:CDS | 30.0% | |
TTCCCATACATATTAAACCT+TGG | + | chr3.3:84369439-84369458 | None:intergenic | 30.0% | |
! | AAATATTCTTTAGGAAGAGG+TGG | + | chr3.3:84369205-84369224 | None:intergenic | 30.0% |
! | ATGAATCATTGTATTGGTGA+TGG | - | chr3.3:84368794-84368813 | MS.gene38702:CDS | 30.0% |
! | ATTTGCTTTGAGTCTTTGAT+TGG | + | chr3.3:84368344-84368363 | None:intergenic | 30.0% |
! | CCAAAATATTCTTTAGGAAG+AGG | + | chr3.3:84369208-84369227 | None:intergenic | 30.0% |
! | CCTCTTCCTAAAGAATATTT+TGG | - | chr3.3:84369205-84369224 | MS.gene38702:CDS | 30.0% |
! | TCGTCTTGTTACTAAAAAGT+CGG | - | chr3.3:84368538-84368557 | MS.gene38702:CDS | 30.0% |
! | TTTGCTTTGAGTCTTTGATT+GGG | + | chr3.3:84368343-84368362 | None:intergenic | 30.0% |
!! | TTGAATGGAAGGTTGATAAT+TGG | + | chr3.3:84368938-84368957 | None:intergenic | 30.0% |
AAAATGGGTGTTTCGTATCT+GGG | + | chr3.3:84368980-84368999 | None:intergenic | 35.0% | |
AACATGCAGAAACGATGTTT+AGG | + | chr3.3:84368304-84368323 | None:intergenic | 35.0% | |
AACTCATCGTGATGTTTGAA+TGG | + | chr3.3:84368953-84368972 | None:intergenic | 35.0% | |
ACATGCAGAAACGATGTTTA+GGG | + | chr3.3:84368303-84368322 | None:intergenic | 35.0% | |
ACATTTCATTGAGAACCTTG+TGG | - | chr3.3:84368460-84368479 | MS.gene38702:CDS | 35.0% | |
ACGAAAACAGTGTAAGAATG+AGG | + | chr3.3:84368569-84368588 | None:intergenic | 35.0% | |
ATAATTGGACCATAACCTTG+TGG | + | chr3.3:84368923-84368942 | None:intergenic | 35.0% | |
ATGATGATATAGTGGTGTGT+AGG | - | chr3.3:84369329-84369348 | MS.gene38702:CDS | 35.0% | |
CATAATAGATGGTTTCCACA+AGG | - | chr3.3:84368905-84368924 | MS.gene38702:CDS | 35.0% | |
CGAAAACAGTGTAAGAATGA+GGG | + | chr3.3:84368568-84368587 | None:intergenic | 35.0% | |
CTTGTGGAAACCATCTATTA+TGG | + | chr3.3:84368907-84368926 | None:intergenic | 35.0% | |
GATCCTTACACTGTTATGAT+GGG | - | chr3.3:84369406-84369425 | MS.gene38702:CDS | 35.0% | |
GCATGAATAAATTTACCTCC+AGG | + | chr3.3:84368608-84368627 | None:intergenic | 35.0% | |
GGAAAAGTAACATCATATCC+AGG | - | chr3.3:84369517-84369536 | MS.gene38702:CDS | 35.0% | |
GGAAACCATCTATTATGGAT+AGG | + | chr3.3:84368902-84368921 | None:intergenic | 35.0% | |
GGTTCTCAATGAAATGTTGT+TGG | + | chr3.3:84368457-84368476 | None:intergenic | 35.0% | |
TAAAATGGGTGTTTCGTATC+TGG | + | chr3.3:84368981-84369000 | None:intergenic | 35.0% | |
TATAGCGAAACTGAAAGCAA+AGG | - | chr3.3:84369033-84369052 | MS.gene38702:CDS | 35.0% | |
TATGGGAATGAATTCGGAAT+GGG | - | chr3.3:84369451-84369470 | MS.gene38702:CDS | 35.0% | |
TATTCAAGTCACGGAATTAG+TGG | - | chr3.3:84368748-84368767 | MS.gene38702:CDS | 35.0% | |
TCAAAGAACGATTGGACAAT+GGG | + | chr3.3:84368680-84368699 | None:intergenic | 35.0% | |
TGATCCTTACACTGTTATGA+TGG | - | chr3.3:84369405-84369424 | MS.gene38702:CDS | 35.0% | |
TGTGAAATGGGACCATAAAT+AGG | + | chr3.3:84368875-84368894 | None:intergenic | 35.0% | |
! | AAAGCTTTAGCAGTTAGAAG+TGG | - | chr3.3:84369475-84369494 | MS.gene38702:CDS | 35.0% |
! | AATGGAAAAGTGTGAGAGAA+AGG | + | chr3.3:84368502-84368521 | None:intergenic | 35.0% |
! | TTGCTTTGAGTCTTTGATTG+GGG | + | chr3.3:84368342-84368361 | None:intergenic | 35.0% |
!! | ATGGATAGGTTGATGTGAAA+TGG | + | chr3.3:84368888-84368907 | None:intergenic | 35.0% |
!! | TGGATAGGTTGATGTGAAAT+GGG | + | chr3.3:84368887-84368906 | None:intergenic | 35.0% |
!! | TGTTGGTTTAGTGATGTTGT+TGG | + | chr3.3:84368440-84368459 | None:intergenic | 35.0% |
!! | TTAGTGGATGGTGTTTTCAT+TGG | - | chr3.3:84368764-84368783 | MS.gene38702:CDS | 35.0% |
!! | TTTTGAAGAGAAGACCCTTT+TGG | + | chr3.3:84368415-84368434 | None:intergenic | 35.0% |
!! | TTTTGGGAATTCACTTCATG+CGG | - | chr3.3:84369222-84369241 | MS.gene38702:CDS | 35.0% |
ACATCATATCCAGGTCAAGA+AGG | - | chr3.3:84369526-84369545 | MS.gene38702:CDS | 40.0% | |
AGATGGTTTCCACAAGGTTA+TGG | - | chr3.3:84368911-84368930 | MS.gene38702:CDS | 40.0% | |
CAGAAACGATGTTTAGGGAA+GGG | + | chr3.3:84368298-84368317 | None:intergenic | 40.0% | |
CAGATGAAGAGTTCAACTTC+TGG | - | chr3.3:84369608-84369627 | MS.gene38702:CDS | 40.0% | |
CATCGTGATGTTTGAATGGA+AGG | + | chr3.3:84368949-84368968 | None:intergenic | 40.0% | |
CTACCCATCATAACAGTGTA+AGG | + | chr3.3:84369412-84369431 | None:intergenic | 40.0% | |
CTATAGACTCAGCTGGAAAA+TGG | + | chr3.3:84369018-84369037 | None:intergenic | 40.0% | |
GAATTGCTGGAGAATGATCT+AGG | - | chr3.3:84369268-84369287 | MS.gene38702:CDS | 40.0% | |
GGAGAGAACAACTTGCAAAA+TGG | - | chr3.3:84369153-84369172 | MS.gene38702:CDS | 40.0% | |
GTATGGGAATGAATTCGGAA+TGG | - | chr3.3:84369450-84369469 | MS.gene38702:CDS | 40.0% | |
GTCAAAGAACGATTGGACAA+TGG | + | chr3.3:84368681-84368700 | None:intergenic | 40.0% | |
TACAAACAACCGAACGAGAA+TGG | - | chr3.3:84369177-84369196 | MS.gene38702:CDS | 40.0% | |
TGATATAGTGGTGTGTAGGT+CGG | - | chr3.3:84369333-84369352 | MS.gene38702:CDS | 40.0% | |
TGTGATGGTCAAAGAACGAT+TGG | + | chr3.3:84368688-84368707 | None:intergenic | 40.0% | |
TTCCATTATTATCCCCTCTC+AGG | - | chr3.3:84368515-84368534 | MS.gene38702:CDS | 40.0% | |
! | AGTGTTTGAGTTTCTCCACA+AGG | + | chr3.3:84368478-84368497 | None:intergenic | 40.0% |
! | TCCAGCAACATCATTTTCTC+TGG | + | chr3.3:84369586-84369605 | None:intergenic | 40.0% |
! | TGCTTTGAGTCTTTGATTGG+GGG | + | chr3.3:84368341-84368360 | None:intergenic | 40.0% |
! | TTTTGCAAGTTGTTCTCTCC+CGG | + | chr3.3:84369153-84369172 | None:intergenic | 40.0% |
!! | TTATGATGGGTAGTTCACCA+AGG | - | chr3.3:84369419-84369438 | MS.gene38702:CDS | 40.0% |
!! | TTGGTGATGGAACAGCTTAT+TGG | - | chr3.3:84368807-84368826 | MS.gene38702:CDS | 40.0% |
AAGAACGATTGGACAATGGG+TGG | + | chr3.3:84368677-84368696 | None:intergenic | 45.0% | |
AAGACATGGTGTGACCATCA+TGG | + | chr3.3:84368721-84368740 | None:intergenic | 45.0% | |
ACAATGGGTGGGACATCAAT+GGG | + | chr3.3:84368665-84368684 | None:intergenic | 45.0% | |
AGAACGATTGGACAATGGGT+GGG | + | chr3.3:84368676-84368695 | None:intergenic | 45.0% | |
AGTAACAAGACGACCTGAGA+GGG | + | chr3.3:84368531-84368550 | None:intergenic | 45.0% | |
AGTTTCGCTATAGACTCAGC+TGG | + | chr3.3:84369025-84369044 | None:intergenic | 45.0% | |
CAAGTCACGGAATTAGTGGA+TGG | - | chr3.3:84368752-84368771 | MS.gene38702:CDS | 45.0% | |
GACCTGAGAGGGGATAATAA+TGG | + | chr3.3:84368520-84368539 | None:intergenic | 45.0% | |
GAGTCTTTGATTGGGGGATA+TGG | + | chr3.3:84368335-84368354 | None:intergenic | 45.0% | |
GATTGCAAAAACAGTCCTGG+AGG | - | chr3.3:84368590-84368609 | MS.gene38702:CDS | 45.0% | |
GCAGAAACGATGTTTAGGGA+AGG | + | chr3.3:84368299-84368318 | None:intergenic | 45.0% | |
GCCAGAGAAAATGATGTTGC+TGG | - | chr3.3:84369582-84369601 | MS.gene38702:CDS | 45.0% | |
GTCGATTGCAAAAACAGTCC+TGG | - | chr3.3:84368587-84368606 | MS.gene38702:CDS | 45.0% | |
TAGTAACAAGACGACCTGAG+AGG | + | chr3.3:84368532-84368551 | None:intergenic | 45.0% | |
TCATATCCAGGTCAAGAAGG+AGG | - | chr3.3:84369529-84369548 | MS.gene38702:CDS | 45.0% | |
TGCTGGAGAATGATCTAGGA+TGG | - | chr3.3:84369272-84369291 | MS.gene38702:CDS | 45.0% | |
! | GCTGGAGAATGATCTAGGAT+GGG | - | chr3.3:84369273-84369292 | MS.gene38702:CDS | 45.0% |
AATGGGTGGGACATCAATGG+GGG | + | chr3.3:84368663-84368682 | None:intergenic | 50.0% | |
CAATGGGTGGGACATCAATG+GGG | + | chr3.3:84368664-84368683 | None:intergenic | 50.0% | |
CACAAAGCAGTCAGCCATGA+TGG | - | chr3.3:84368704-84368723 | MS.gene38702:CDS | 50.0% | |
CATGGCTGACTGCTTTGTGA+TGG | + | chr3.3:84368703-84368722 | None:intergenic | 50.0% | |
GACAATGGGTGGGACATCAA+TGG | + | chr3.3:84368666-84368685 | None:intergenic | 50.0% | |
GAGGTGGTTCCATTCTCGTT+CGG | + | chr3.3:84369189-84369208 | None:intergenic | 50.0% | |
GTAACAAGACGACCTGAGAG+GGG | + | chr3.3:84368530-84368549 | None:intergenic | 50.0% | |
GTGCACGTCAACTACAACAC+CGG | - | chr3.3:84369131-84369150 | MS.gene38702:CDS | 50.0% | |
TATCCAGGTCAAGAAGGAGG+AGG | - | chr3.3:84369532-84369551 | MS.gene38702:CDS | 50.0% | |
TGCACGTCAACTACAACACC+GGG | - | chr3.3:84369132-84369151 | MS.gene38702:CDS | 50.0% | |
TGTGTAGGTCGGTTGAAGAG+TGG | - | chr3.3:84369344-84369363 | MS.gene38702:CDS | 50.0% | |
! | ATGATCTAGGATGGGCAGCA+TGG | - | chr3.3:84369281-84369300 | MS.gene38702:CDS | 50.0% |
!! | TGAGTGCTGAAACGACGGTA+GGG | - | chr3.3:84369245-84369264 | MS.gene38702:CDS | 50.0% |
AACGACGGTAGGGGAATTGC+TGG | - | chr3.3:84369255-84369274 | MS.gene38702:CDS | 55.0% | |
CTTCCTCCTCCTTCTTGACC+TGG | + | chr3.3:84369538-84369557 | None:intergenic | 55.0% | |
!! | GAGTGCTGAAACGACGGTAG+GGG | - | chr3.3:84369246-84369265 | MS.gene38702:CDS | 55.0% |
!! | GTGAGTGCTGAAACGACGGT+AGG | - | chr3.3:84369244-84369263 | MS.gene38702:CDS | 55.0% |
!! | TGCGGTGAGTGCTGAAACGA+CGG | - | chr3.3:84369240-84369259 | MS.gene38702:CDS | 55.0% |
GTGGGACATCAATGGGGGTG+AGG | + | chr3.3:84368658-84368677 | None:intergenic | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr3.3 | gene | 84368287 | 84369657 | 84368287 | ID=MS.gene38702 |
chr3.3 | mRNA | 84368287 | 84369657 | 84368287 | ID=MS.gene38702.t1;Parent=MS.gene38702 |
chr3.3 | exon | 84368287 | 84369657 | 84368287 | ID=MS.gene38702.t1.exon1;Parent=MS.gene38702.t1 |
chr3.3 | CDS | 84368287 | 84369657 | 84368287 | ID=cds.MS.gene38702.t1;Parent=MS.gene38702.t1 |
Gene Sequence |
Protein sequence |