AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene026145

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene026145.t1 MTR_1g040315 84.689 418 61 3 1 416 1 417 0.0 721
MS.gene026145.t1 MTR_1g040195 67.679 461 79 8 1 416 1 436 0.0 595
MS.gene026145.t1 MTR_1g040215 64.069 462 119 7 1 416 1 461 0.0 577
MS.gene026145.t1 MTR_1g040175 60.521 461 134 7 1 416 1 458 0.0 536
MS.gene026145.t1 MTR_1g040320 57.484 461 115 7 1 416 1 425 5.69e-172 488
MS.gene026145.t1 MTR_5g076700 51.299 462 168 11 5 416 6 460 1.73e-150 434
MS.gene026145.t1 MTR_7g114470 49.244 463 177 10 5 416 7 462 8.11e-145 420
MS.gene026145.t1 MTR_7g114560 48.590 461 181 11 5 416 6 459 3.72e-144 418
MS.gene026145.t1 MTR_7g114550 48.337 451 179 10 2 403 3 448 1.57e-142 414
MS.gene026145.t1 MTR_1g081660 50.450 444 169 11 4 400 13 452 1.61e-137 401
MS.gene026145.t1 MTR_7g114520 47.277 459 192 9 5 416 7 462 5.21e-137 400
MS.gene026145.t1 MTR_7g114490 47.209 430 179 8 5 388 6 433 1.29e-130 385
MS.gene026145.t1 MTR_0042s0190 54.362 298 89 7 165 416 1 297 2.58e-98 295
MS.gene026145.t1 MTR_0042s0230 76.871 147 34 0 1 147 1 147 9.12e-78 238
MS.gene026145.t1 MTR_0502s0010 56.637 226 84 8 100 316 1 221 1.52e-76 238
MS.gene026145.t1 MTR_0042s0190 53.509 228 61 5 234 416 5 232 8.88e-71 223
MS.gene026145.t1 MTR_8g039950 78.906 128 27 0 1 128 1 128 1.32e-68 213
MS.gene026145.t1 MTR_7g114510 42.767 318 129 11 147 416 8 320 7.88e-67 216
MS.gene026145.t1 MTR_7g114500 54.000 150 69 0 2 151 3 152 1.08e-55 181
MS.gene026145.t1 MTR_7g114420 41.060 302 94 12 165 416 1 268 4.08e-55 183
MS.gene026145.t1 MTR_8g096530 31.061 396 222 14 1 353 1 388 8.07e-53 182
MS.gene026145.t1 MTR_3g098980 30.048 416 238 13 17 388 22 428 2.27e-51 178
MS.gene026145.t1 MTR_3g051790 55.479 146 65 0 2 147 6 151 4.49e-51 170
MS.gene026145.t1 MTR_7g027175 30.263 380 216 12 16 352 23 396 2.48e-46 165
MS.gene026145.t1 MTR_3g035000 39.834 241 74 8 194 387 39 255 8.86e-38 139
MS.gene026145.t1 MTR_1g053315 28.571 441 251 18 17 396 26 463 1.52e-36 139
MS.gene026145.t1 MTR_4g055170 26.754 456 257 14 4 393 9 453 7.70e-35 134
MS.gene026145.t1 MTR_2g105330 27.045 440 254 18 5 390 1 427 1.10e-34 133
MS.gene026145.t1 MTR_2g064495 27.103 428 247 17 17 390 11 427 2.69e-33 129
MS.gene026145.t1 MTR_7g110610 26.464 427 211 15 5 387 1 368 1.28e-32 127
MS.gene026145.t1 MTR_8g075610 27.523 436 235 18 17 392 2 416 1.62e-31 124
MS.gene026145.t1 MTR_3g112180 27.062 388 228 11 17 357 20 399 1.50e-30 122
MS.gene026145.t1 MTR_4g007540 26.733 404 229 15 41 388 34 426 4.65e-30 120
MS.gene026145.t1 MTR_4g088765 67.123 73 24 0 1 73 1 73 4.43e-27 104
MS.gene026145.t1 MTR_7g085930 29.022 317 185 12 16 303 13 318 5.04e-26 109
MS.gene026145.t1 MTR_3g071320 26.879 439 256 18 8 391 6 434 3.05e-25 107
MS.gene026145.t1 MTR_4g013050 25.694 432 220 14 17 388 12 402 3.47e-25 106
MS.gene026145.t1 MTR_7g084940 24.552 391 247 11 5 352 12 397 9.23e-25 105
MS.gene026145.t1 MTR_7g085990 28.165 316 187 11 17 303 10 314 9.59e-25 106
MS.gene026145.t1 MTR_3g465930 25.905 359 224 14 7 337 8 352 1.99e-24 105
MS.gene026145.t1 MTR_7g084910 25.668 374 244 11 8 352 16 384 8.96e-24 103
MS.gene026145.t1 MTR_6g053810 26.524 328 204 13 3 304 5 321 3.83e-23 101
MS.gene026145.t1 MTR_3g465910 24.930 357 227 15 7 337 8 349 9.09e-23 100
MS.gene026145.t1 MTR_7g086000 26.633 398 201 20 61 380 57 441 8.66e-22 97.4
MS.gene026145.t1 MTR_3g465990 25.215 349 218 14 4 325 7 339 1.77e-21 96.7
MS.gene026145.t1 MTR_3g465950 25.843 356 228 12 7 337 8 352 5.26e-21 95.1
MS.gene026145.t1 MTR_4g127650 26.235 324 214 11 8 314 9 324 2.20e-20 93.2
MS.gene026145.t1 MTR_4g097090 25.868 317 209 10 16 314 16 324 4.06e-20 92.4
MS.gene026145.t1 MTR_8g079980 23.884 448 240 22 15 393 9 424 3.66e-18 86.3
MS.gene026145.t1 MTR_3g465870 25.754 431 264 19 5 395 8 422 5.69e-18 85.9
MS.gene026145.t1 MTR_3g026950 22.249 409 237 15 17 353 10 409 1.71e-17 84.3
MS.gene026145.t1 MTR_3g465880 26.786 336 212 13 16 325 17 344 2.12e-17 84.3
MS.gene026145.t1 MTR_7g114417 67.308 52 16 1 89 139 29 80 2.76e-16 73.9
MS.gene026145.t1 MTR_8g041770 27.961 304 181 13 23 309 31 313 3.05e-16 80.5
MS.gene026145.t1 MTR_5g084870 21.628 430 267 15 15 393 9 419 4.09e-16 80.1
MS.gene026145.t1 MTR_8g079950 29.609 179 109 6 15 186 9 177 5.44e-16 80.1
MS.gene026145.t1 MTR_3g049150 22.222 405 234 14 17 351 10 403 6.36e-16 79.7
MS.gene026145.t1 MTR_8g467590 23.434 431 242 19 12 375 6 415 7.21e-16 79.7
MS.gene026145.t1 MTR_5g090880 25.000 416 212 17 41 383 49 437 8.36e-16 79.3
MS.gene026145.t1 MTR_7g026860 25.238 420 239 16 23 386 25 425 4.98e-15 77.0
MS.gene026145.t1 MTR_0190s0020 28.041 296 181 13 23 303 30 308 6.52e-15 76.6
MS.gene026145.t1 MTR_5g090830 24.873 394 208 15 29 350 37 414 1.40e-14 75.9
MS.gene026145.t1 MTR_4g022670 24.832 447 210 19 23 386 25 428 4.78e-14 73.9
MS.gene026145.t1 MTR_4g094838 25.743 303 170 14 23 303 29 298 8.40e-14 73.2
MS.gene026145.t1 MTR_8g467580 22.917 432 239 19 14 375 8 415 1.23e-13 72.8
MS.gene026145.t1 MTR_4g094835 25.993 277 166 10 51 303 51 312 1.76e-13 72.4
MS.gene026145.t1 MTR_4g094842 26.429 280 175 13 48 305 46 316 1.81e-13 72.0
MS.gene026145.t1 MTR_3g450690 26.027 219 135 6 64 268 72 277 4.01e-13 71.2
MS.gene026145.t1 MTR_4g022800 26.733 303 189 13 23 307 25 312 4.62e-13 70.9
MS.gene026145.t1 MTR_1g094790 25.123 406 224 19 15 356 9 398 5.83e-13 70.5
MS.gene026145.t1 MTR_8g079710 25.977 435 219 21 23 386 30 432 1.46e-12 69.3
MS.gene026145.t1 MTR_3g101960 28.520 277 166 13 58 314 62 326 1.58e-12 69.3
MS.gene026145.t1 MTR_4g022720 26.821 302 184 15 23 307 25 306 2.55e-12 68.6
MS.gene026145.t1 MTR_4g094832 29.694 229 127 10 94 304 85 297 5.49e-12 67.4
MS.gene026145.t1 MTR_4g022760 27.961 304 184 14 23 307 25 312 1.94e-11 65.9
MS.gene026145.t1 MTR_3g051820 42.268 97 42 5 328 416 1 91 2.49e-11 60.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene026145.t1 AT5G17540 49.036 467 181 13 1 416 1 461 2.12e-140 409
MS.gene026145.t1 AT3G03480 47.392 441 179 11 5 397 15 450 1.32e-125 371
MS.gene026145.t1 AT5G41040 31.250 384 209 13 16 352 40 415 2.80e-51 179
MS.gene026145.t1 AT5G41040 31.250 384 209 13 16 352 24 399 3.55e-51 178
MS.gene026145.t1 AT3G48720 27.650 434 262 13 1 390 1 426 1.72e-50 176
MS.gene026145.t1 AT5G63560 29.157 439 251 16 1 393 1 425 1.26e-49 174
MS.gene026145.t1 AT1G27620 27.751 418 245 14 16 388 16 421 3.11e-34 132
MS.gene026145.t1 AT3G62160 28.125 416 232 14 5 369 1 400 5.04e-34 132
MS.gene026145.t1 AT5G48930 27.438 441 252 17 8 392 2 430 7.80e-34 131
MS.gene026145.t1 AT5G57840 26.049 453 243 15 8 390 2 432 1.05e-31 125
MS.gene026145.t1 AT1G65450 26.862 443 256 17 1 388 12 441 4.91e-31 124
MS.gene026145.t1 AT1G03390 28.412 447 235 18 16 392 24 455 3.15e-29 119
MS.gene026145.t1 AT2G19070 25.225 444 256 14 17 392 12 447 3.90e-29 118
MS.gene026145.t1 AT2G40230 30.380 316 191 15 17 313 13 318 3.88e-27 112
MS.gene026145.t1 AT1G28680 24.887 442 269 16 14 397 9 445 4.76e-27 112
MS.gene026145.t1 AT3G47170 26.287 369 220 15 7 337 10 364 5.50e-25 107
MS.gene026145.t1 AT1G28680 28.053 303 200 12 14 303 9 306 1.85e-24 104
MS.gene026145.t1 AT5G07080 28.527 319 193 12 9 305 14 319 4.28e-23 101
MS.gene026145.t1 AT2G23510 25.000 472 251 17 1 395 5 450 5.01e-23 100
MS.gene026145.t1 AT2G25150 23.503 451 274 15 9 397 13 454 1.34e-21 97.1
MS.gene026145.t1 AT1G31490 28.077 260 167 9 17 268 14 261 2.04e-19 90.5
MS.gene026145.t1 AT3G26040 24.194 434 251 18 15 391 9 421 5.25e-19 89.0
MS.gene026145.t1 AT1G24420 28.526 312 177 14 15 306 11 296 6.66e-18 85.9
MS.gene026145.t1 AT1G24420 28.526 312 177 14 15 306 11 296 6.66e-18 85.9
MS.gene026145.t1 AT5G47980 26.316 456 246 23 15 404 11 442 8.68e-18 85.5
MS.gene026145.t1 AT1G78990 25.284 352 184 12 62 351 65 399 9.33e-18 85.5
MS.gene026145.t1 AT5G07850 28.169 355 201 16 16 345 15 340 2.32e-16 81.3
MS.gene026145.t1 AT4G31910 25.075 335 187 12 25 314 24 339 5.65e-16 80.1
MS.gene026145.t1 AT3G50270 26.708 322 177 12 23 313 30 323 3.65e-14 74.3
MS.gene026145.t1 AT5G16410 24.784 347 191 13 62 351 89 422 9.84e-14 73.2
MS.gene026145.t1 AT5G07860 24.742 388 228 15 64 399 72 447 1.34e-13 72.8
MS.gene026145.t1 AT3G23840 29.756 205 123 9 73 269 72 263 1.62e-12 69.3
MS.gene026145.t1 AT5G47950 24.648 284 178 10 7 281 4 260 3.92e-12 68.2
MS.gene026145.t1 AT4G15400 23.409 440 244 19 15 391 11 420 1.40e-11 66.2

Find 103 sgRNAs with CRISPR-Local

Find 229 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CACTCCATTGCTGCTTATTC+AGG 0.196232 1.2:-24694186 MS.gene026145:intron
GAACATTAACCAACCAACTA+TGG 0.255243 1.2:-24692105 MS.gene026145:CDS
TAAAGGGATAATTGTTTCTT+TGG 0.270402 1.2:+24692637 None:intergenic
TCATCCTCCATTTCCTTGCT+TGG 0.281673 1.2:-24694252 MS.gene026145:CDS
CGCCCAAGGCACTCATGAAT+TGG 0.287573 1.2:+24692783 None:intergenic
GAAATAATGATACTAGGTTT+TGG 0.325240 1.2:+24692077 None:intergenic
TCACTTTGAATACTAGAGAT+TGG 0.347075 1.2:+24694597 None:intergenic
AAACTACAGTCTCACCATTA+TGG 0.349076 1.2:-24692739 MS.gene026145:CDS
ATTCTCTGCTCTTTCTTCTT+CGG 0.349771 1.2:-24692605 MS.gene026145:CDS
GATGTTACTCTTATACAATT+TGG 0.359716 1.2:-24694284 MS.gene026145:CDS
CGAACTTCTTCGTCGATGTC+TGG 0.379960 1.2:+24692470 None:intergenic
TAGGATGAGTGATGCTAGTT+TGG 0.381149 1.2:-24692807 MS.gene026145:CDS
CACTTTGAATACTAGAGATT+GGG 0.389632 1.2:+24694598 None:intergenic
AAATCCTCACTGCATTCCTT+TGG 0.393738 1.2:-24692517 MS.gene026145:CDS
GTCCAATTCATGAGTGCCTT+GGG 0.394286 1.2:-24692785 MS.gene026145:CDS
AGAGAGGTTGATTTCGGTTG+GGG 0.399146 1.2:-24692284 MS.gene026145:CDS
AGCTGATCCAAGCAAGGAAA+TGG 0.402058 1.2:+24694245 None:intergenic
TAGAGAGGTTGATTTCGGTT+GGG 0.403875 1.2:-24692285 MS.gene026145:CDS
AGGTCCTGGCAGGAAACTTA+TGG 0.416255 1.2:-24694351 MS.gene026145:CDS
GGTTGGGGAAAACCTTGTTA+TGG 0.420339 1.2:-24692269 MS.gene026145:CDS
CAGCTTCTATACGATGTTCC+TGG 0.423861 1.2:-24694227 MS.gene026145:CDS
TGCTAAAGGAGTAGAAGGTT+TGG 0.428539 1.2:-24692195 MS.gene026145:CDS
GGTCCAATTCATGAGTGCCT+TGG 0.438058 1.2:-24692786 MS.gene026145:CDS
AACTGGATCTTTCCCTGCCA+TGG 0.438203 1.2:+24694442 None:intergenic
ATAATTGTTTCTTTGGTGTC+GGG 0.439179 1.2:+24692644 None:intergenic
GGATCTTTCCCTGCCATGGT+TGG 0.441588 1.2:+24694446 None:intergenic
AACTATGATCCAACCATGGC+AGG 0.450855 1.2:-24694455 MS.gene026145:CDS
CAAAATTAGAGTGTTGTTGT+TGG 0.454490 1.2:+24692540 None:intergenic
TTAGAGAGGTTGATTTCGGT+TGG 0.464104 1.2:-24692286 MS.gene026145:CDS
ATCCATTTGCAGGTAGATTG+AGG 0.464119 1.2:-24694376 MS.gene026145:CDS
CCATCTTGTTCATCCATGTC+TGG 0.464460 1.2:+24694512 None:intergenic
ACTGCAGTTGTAACCGCAGC+AGG 0.466823 1.2:+24692374 None:intergenic
CAGAGAATTGTGGCATGTAA+AGG 0.466829 1.2:+24692620 None:intergenic
AGAAACTCTCTATGCCATAA+TGG 0.466885 1.2:+24692725 None:intergenic
GATAATTGTTTCTTTGGTGT+CGG 0.469946 1.2:+24692643 None:intergenic
TCCCTCAATCTACCTGCAAA+TGG 0.471845 1.2:+24694374 None:intergenic
AGTAGAAGGTTTGGTTATAC+CGG 0.475564 1.2:-24692186 MS.gene026145:CDS
TAGTAACCGTTTGGTAAGGA+TGG 0.475825 1.2:+24692416 None:intergenic
GCTTGAGTTGGCAAACAAAC+CGG 0.482135 1.2:+24692167 None:intergenic
TCCATTTGCAGGTAGATTGA+GGG 0.491578 1.2:-24694375 MS.gene026145:CDS
TTGCTCTTCGTCTAAACCAT+AGG 0.494992 1.2:-24692826 MS.gene026145:CDS
AGAGAATTGTGGCATGTAAA+GGG 0.496978 1.2:+24692621 None:intergenic
AAACTTATGGTTGATTGTAA+TGG 0.500661 1.2:-24694338 MS.gene026145:CDS
TGGATGAACAAGATGGATTA+CGG 0.502701 1.2:-24694505 MS.gene026145:CDS
GTGGTTGATGTTAAACATGC+TGG 0.504572 1.2:-24692311 MS.gene026145:CDS
AACTAGCATCACTCATCCTA+TGG 0.508414 1.2:+24692810 None:intergenic
ATTAACCCATCCTTACCAAA+CGG 0.518777 1.2:-24692422 MS.gene026145:CDS
TCCTTACCAAACGGTTACTA+CGG 0.519496 1.2:-24692413 MS.gene026145:CDS
TTGTTTGCCAACTCAAGCCA+TGG 0.519556 1.2:-24692162 MS.gene026145:CDS
GCCGTAGTAACCGTTTGGTA+AGG 0.521315 1.2:+24692412 None:intergenic
TTGGACCACCCATAGTTGGT+TGG 0.528285 1.2:+24692096 None:intergenic
GTGTTGCCGTAGTAACCGTT+TGG 0.534089 1.2:+24692407 None:intergenic
TAGTTGTAAAATTGTATCAC+AGG 0.535180 1.2:+24694473 None:intergenic
AAGGAAGAAATAATGATACT+AGG 0.541907 1.2:+24692071 None:intergenic
GAAGAAAGAGCAGAGAATTG+TGG 0.542995 1.2:+24692610 None:intergenic
ATAGAGAGTTTCTAAATGCA+AGG 0.543840 1.2:-24692715 MS.gene026145:CDS
TGAGTGCATGTTACTCTTGG+TGG 0.546616 1.2:+24692689 None:intergenic
AACCTCTCCATGGCTTGAGT+TGG 0.547625 1.2:+24692155 None:intergenic
GGAGAGGTTCACTAAAGAGT+TGG 0.550504 1.2:-24692141 MS.gene026145:CDS
GAGTGTTGTTGTTGGTGAGG+TGG 0.551701 1.2:+24692548 None:intergenic
GATTGAGGGAAGGTCCTGGC+AGG 0.552476 1.2:-24694361 MS.gene026145:CDS
GCCTTGGGCGAAATATCTCA+TGG 0.552661 1.2:-24692770 MS.gene026145:CDS
ACATTAGTTCAAGGTCTACA+AGG 0.553029 1.2:+24692052 None:intergenic
AACATTAACCAACCAACTAT+GGG 0.553693 1.2:-24692104 MS.gene026145:CDS
CTCTTTAGTGAACCTCTCCA+TGG 0.558050 1.2:+24692145 None:intergenic
TATACCTGAATAAGCAGCAA+TGG 0.559109 1.2:+24694182 None:intergenic
GAAACAACTCCTCCTTTAGC+TGG 0.563051 1.2:+24692242 None:intergenic
TGTTATGGAGGACCAGCTAA+AGG 0.564399 1.2:-24692254 MS.gene026145:CDS
CTCTAGTATTCAAAGTGAAG+AGG 0.566253 1.2:-24694592 MS.gene026145:CDS
GGTAGATTGAGGGAAGGTCC+TGG 0.568132 1.2:-24694365 MS.gene026145:CDS
CGATGAGTGCATGTTACTCT+TGG 0.574046 1.2:+24692686 None:intergenic
CAATTGTACGACAACGCCAA+AGG 0.577956 1.2:+24692501 None:intergenic
GCGAATTGCAGCTACCTCAG+TGG 0.579537 1.2:+24692580 None:intergenic
TTAGAGTGTTGTTGTTGGTG+AGG 0.580129 1.2:+24692545 None:intergenic
AGTAACCGTTTGGTAAGGAT+GGG 0.580599 1.2:+24692417 None:intergenic
TTAGCTGGTCCTCCATAACA+AGG 0.580970 1.2:+24692257 None:intergenic
ACTATGATCCAACCATGGCA+GGG 0.585303 1.2:-24694454 MS.gene026145:CDS
CCCATGAGATATTTCGCCCA+AGG 0.588719 1.2:+24692769 None:intergenic
CGAATTGCAGCTACCTCAGT+GGG 0.590147 1.2:+24692581 None:intergenic
TGCCAACTCAAGCCATGGAG+AGG 0.591210 1.2:-24692157 MS.gene026145:CDS
CTAAGCATATCTGAGGAACC+AGG 0.605844 1.2:+24694209 None:intergenic
AAGAAAATTACTTCCAGACA+TGG 0.608970 1.2:-24694525 MS.gene026145:CDS
TGATCCAAGCAAGGAAATGG+AGG 0.612576 1.2:+24694248 None:intergenic
CCAGACATGGATGAACAAGA+TGG 0.612991 1.2:-24694512 MS.gene026145:CDS
TCAACCATAAGTTTCCTGCC+AGG 0.615495 1.2:+24694347 None:intergenic
TGGGGAAAACCTTGTTATGG+AGG 0.615938 1.2:-24692266 MS.gene026145:CDS
GTTCGCATAGTCAACGTGCA+TGG 0.616616 1.2:-24692452 MS.gene026145:CDS
TATAGAAGCTGATCCAAGCA+AGG 0.620895 1.2:+24694239 None:intergenic
GCTCTCACCACAGTAAAATG+AGG 0.627802 1.2:+24692341 None:intergenic
ATGGTTGATTGTAATGGTGA+AGG 0.627996 1.2:-24694332 MS.gene026145:CDS
TAGAGAGTTTCTAAATGCAA+GGG 0.632790 1.2:-24692714 MS.gene026145:CDS
TCACCACAGTAAAATGAGGT+CGG 0.638789 1.2:+24692345 None:intergenic
GTAACACGTCTTAAGTGTGG+TGG 0.641793 1.2:-24692857 MS.gene026145:CDS
CCTTGGGCGAAATATCTCAT+GGG 0.641833 1.2:-24692769 MS.gene026145:CDS
TGGAGTGCTAAGCATATCTG+AGG 0.646945 1.2:+24694202 None:intergenic
ATTAACCAACCAACTATGGG+TGG 0.662304 1.2:-24692101 MS.gene026145:CDS
TTTGCAGGTAGATTGAGGGA+AGG 0.669320 1.2:-24694371 MS.gene026145:CDS
TATGGAGGACCAGCTAAAGG+AGG 0.679087 1.2:-24692251 MS.gene026145:CDS
TTACAACTATGATCCAACCA+TGG 0.692468 1.2:-24694459 MS.gene026145:CDS
CAGGTAACACGTCTTAAGTG+TGG 0.717815 1.2:-24692860 MS.gene026145:CDS
AACGCCAAAGGAATGCAGTG+AGG 0.720001 1.2:+24692513 None:intergenic
TTTCTTCTTCGGTCCCACTG+AGG 0.728927 1.2:-24692594 MS.gene026145:CDS
TGTGGTGAGAGCATATCTAG+TGG 0.753755 1.2:-24692330 MS.gene026145:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! CTTATTTATTTATACAAAAT+AGG + chr1.2:24693242-24693261 None:intergenic 10.0%
!!! ATTTTCTTTTCAAAATTATT+GGG + chr1.2:24692659-24692678 None:intergenic 10.0%
!!! CTCTTATTTTTTTATTTTTT+TGG + chr1.2:24693274-24693293 None:intergenic 10.0%
!!! TTGCATTTATTTTAAAAAAT+AGG - chr1.2:24693376-24693395 MS.gene026145:intron 10.0%
!!! TTTTAAATAAAAAAAATACG+TGG - chr1.2:24693519-24693538 MS.gene026145:intron 10.0%
!! TTAGTGTTAAATTAAAAGTA+GGG - chr1.2:24693087-24693106 MS.gene026145:intron 15.0%
!! TTTAGTGTTAAATTAAAAGT+AGG - chr1.2:24693086-24693105 MS.gene026145:intron 15.0%
!!! ATAATTTTGAAAAGAAAATG+AGG - chr1.2:24692660-24692679 MS.gene026145:CDS 15.0%
!!! CATTTTCTTTTCAAAATTAT+TGG + chr1.2:24692660-24692679 None:intergenic 15.0%
!!! TTTTGTAGTTTTTTTTCTTA+GGG - chr1.2:24693632-24693651 MS.gene026145:intron 15.0%
!! ATAGATAGTGTTTATAAGTT+GGG + chr1.2:24693155-24693174 None:intergenic 20.0%
!! CTAGGTTATATATTTATGTT+TGG + chr1.2:24693342-24693361 None:intergenic 20.0%
!! TAAAAAACAGTTAAATTGCA+GGG + chr1.2:24692992-24693011 None:intergenic 20.0%
!! TATAGATAGTGTTTATAAGT+TGG + chr1.2:24693156-24693175 None:intergenic 20.0%
!! TCAATTCAATTATTTCATGT+TGG - chr1.2:24693047-24693066 MS.gene026145:intron 20.0%
!!! AACACATGTGATTATTTTTT+AGG + chr1.2:24693708-24693727 None:intergenic 20.0%
!!! ATACCTTTTAAAAATGCTAA+AGG - chr1.2:24694460-24694479 MS.gene026145:CDS 20.0%
!!! ATTAGATTTTACAAGCAATA+AGG + chr1.2:24692735-24692754 None:intergenic 20.0%
!!! ATTTTTCGAATATATGTATG+AGG + chr1.2:24693310-24693329 None:intergenic 20.0%
!!! GTTTTGTAGTTTTTTTTCTT+AGG - chr1.2:24693631-24693650 MS.gene026145:intron 20.0%
!!! TAGCATTTTTTTTTGTTGAA+CGG + chr1.2:24693199-24693218 None:intergenic 20.0%
!!! TGAAATATTTTAACGTGTTT+TGG + chr1.2:24692901-24692920 None:intergenic 20.0%
!!! TTTGTAGTTTTTTTTCTTAG+GGG - chr1.2:24693633-24693652 MS.gene026145:intron 20.0%
!!! TTTTATTTAAAATTGCCCTT+GGG + chr1.2:24693511-24693530 None:intergenic 20.0%
!!! TTTTTATTTAAAATTGCCCT+TGG + chr1.2:24693512-24693531 None:intergenic 20.0%
! AAACTTATGGTTGATTGTAA+TGG - chr1.2:24692331-24692350 MS.gene026145:CDS 25.0%
! AAAGTAAGGTTGAATATATG+AGG - chr1.2:24692686-24692705 MS.gene026145:CDS 25.0%
! AAGGAAGAAATAATGATACT+AGG + chr1.2:24694601-24694620 None:intergenic 25.0%
! CTAAAAAACAGTTAAATTGC+AGG + chr1.2:24692993-24693012 None:intergenic 25.0%
! GAAATAATTGAATTGAACCA+CGG + chr1.2:24693043-24693062 None:intergenic 25.0%
! GATGTTACTCTTATACAATT+TGG - chr1.2:24692385-24692404 MS.gene026145:CDS 25.0%
! TAGTTGTAAAATTGTATCAC+AGG + chr1.2:24692199-24692218 None:intergenic 25.0%
! TATTTCATGTTGGATAAGTT+TGG - chr1.2:24693057-24693076 MS.gene026145:intron 25.0%
! TGTTAAATTAAAAGTAGGGT+TGG - chr1.2:24693091-24693110 MS.gene026145:intron 25.0%
!! ACTCCTTTAGCATTTTTAAA+AGG + chr1.2:24694466-24694485 None:intergenic 25.0%
!! CAGATTTTCGAATCTAAATA+GGG - chr1.2:24692919-24692938 MS.gene026145:intron 25.0%
!! GAAATAATGATACTAGGTTT+TGG + chr1.2:24694595-24694614 None:intergenic 25.0%
!! GCTTTTCTAATAATATCAAC+TGG + chr1.2:24692247-24692266 None:intergenic 25.0%
!! TAAAGGGATAATTGTTTCTT+TGG + chr1.2:24694035-24694054 None:intergenic 25.0%
!! TCAGATTTTCGAATCTAAAT+AGG - chr1.2:24692918-24692937 MS.gene026145:intron 25.0%
!! TTAGTCTTCATAATATGCTT+CGG - chr1.2:24692516-24692535 MS.gene026145:CDS 25.0%
!! TTTATTTAAAATTGCCCTTG+GGG + chr1.2:24693510-24693529 None:intergenic 25.0%
!!! AAATTGCAGGGTTTATTTTT+AGG + chr1.2:24692980-24692999 None:intergenic 25.0%
!!! AATATTTTAACGTGTTTTGG+AGG + chr1.2:24692898-24692917 None:intergenic 25.0%
!!! GGTTTTGTAGTTTTTTCTTT+GGG + chr1.2:24693452-24693471 None:intergenic 25.0%
!!! GTTTTGTAGTTTTTTCTTTG+GGG + chr1.2:24693451-24693470 None:intergenic 25.0%
!!! GTTTTTTAGAGTTTTCTCTT+TGG - chr1.2:24693004-24693023 MS.gene026145:intron 25.0%
!!! TAATCACATGTGTTTGATTT+TGG - chr1.2:24693714-24693733 MS.gene026145:intron 25.0%
!!! TTGATGGTTTTACAAATTCA+AGG + chr1.2:24692108-24692127 None:intergenic 25.0%
!!! TTGTAGTTTTTTTTCTTAGG+GGG - chr1.2:24693634-24693653 MS.gene026145:intron 25.0%
!!! TTTTGTAGTTTTTTCTTTGG+GGG + chr1.2:24693450-24693469 None:intergenic 25.0%
AAAAATGCTAAAGGAGTAGA+AGG - chr1.2:24694469-24694488 MS.gene026145:CDS 30.0%
AACATTAACCAACCAACTAT+GGG - chr1.2:24694565-24694584 MS.gene026145:CDS 30.0%
AAGAAAATTACTTCCAGACA+TGG - chr1.2:24692144-24692163 MS.gene026145:CDS 30.0%
AATAAGGCCTCATATTCTAA+GGG + chr1.2:24692719-24692738 None:intergenic 30.0%
AGAAAATGAGGTCAAAAGTA+AGG - chr1.2:24692672-24692691 MS.gene026145:CDS 30.0%
ATAGAGAGTTTCTAAATGCA+AGG - chr1.2:24693954-24693973 MS.gene026145:intron 30.0%
ATTAAAAGTAGGGTTGGAAT+TGG - chr1.2:24693097-24693116 MS.gene026145:intron 30.0%
CACTTTGAATACTAGAGATT+GGG + chr1.2:24692074-24692093 None:intergenic 30.0%
GATTAGATTCACAGATATCT+TGG + chr1.2:24692573-24692592 None:intergenic 30.0%
TAGAGAGTTTCTAAATGCAA+GGG - chr1.2:24693955-24693974 MS.gene026145:intron 30.0%
TCACTTTGAATACTAGAGAT+TGG + chr1.2:24692075-24692094 None:intergenic 30.0%
TTATATAATCCGAACTGCAT+AGG + chr1.2:24692847-24692866 None:intergenic 30.0%
TTTCATGCTTTATGCTTTGA+TGG - chr1.2:24692767-24692786 MS.gene026145:CDS 30.0%
TTTCGAATATATGTATGAGG+CGG + chr1.2:24693307-24693326 None:intergenic 30.0%
! AATTTTCTTTCATGAGGTGT+TGG + chr1.2:24692133-24692152 None:intergenic 30.0%
! ATAGTGTTTATAAGTTGGGT+TGG + chr1.2:24693151-24693170 None:intergenic 30.0%
! GATAATTGTTTCTTTGGTGT+CGG + chr1.2:24694029-24694048 None:intergenic 30.0%
! GGAAGTAATTTTCTTTCATG+AGG + chr1.2:24692139-24692158 None:intergenic 30.0%
! TAGTGTTTATAAGTTGGGTT+GGG + chr1.2:24693150-24693169 None:intergenic 30.0%
! TTATTTAAAATTGCCCTTGG+GGG + chr1.2:24693509-24693528 None:intergenic 30.0%
!! ATAATTGTTTCTTTGGTGTC+GGG + chr1.2:24694028-24694047 None:intergenic 30.0%
!! CAAAATTAGAGTGTTGTTGT+TGG + chr1.2:24694132-24694151 None:intergenic 30.0%
!! CGGTTTTGTAGTTTTTTCTT+TGG + chr1.2:24693453-24693472 None:intergenic 30.0%
!!! ACCAAGTCAAAATTGGTTTT+GGG - chr1.2:24693572-24693591 MS.gene026145:intron 30.0%
!!! CTTTTTTCCCTTAGAATATG+AGG - chr1.2:24692709-24692728 MS.gene026145:CDS 30.0%
!!! GTGTTTTGGAGGTTTTTATA+GGG + chr1.2:24692887-24692906 None:intergenic 30.0%
AAACTACAGTCTCACCATTA+TGG - chr1.2:24693930-24693949 MS.gene026145:intron 35.0%
AAGCAAAAGCTTCAAGGTTA+AGG + chr1.2:24692793-24692812 None:intergenic 35.0%
AGAAACTCTCTATGCCATAA+TGG + chr1.2:24693947-24693966 None:intergenic 35.0%
AGAGAATTGTGGCATGTAAA+GGG + chr1.2:24694051-24694070 None:intergenic 35.0%
ATCGCAAATTCGTGAAAGTT+AGG + chr1.2:24693422-24693441 None:intergenic 35.0%
ATGGTTGATTGTAATGGTGA+AGG - chr1.2:24692337-24692356 MS.gene026145:CDS 35.0%
ATTAACCCATCCTTACCAAA+CGG - chr1.2:24694247-24694266 MS.gene026145:CDS 35.0%
ATTCTCTGCTCTTTCTTCTT+CGG - chr1.2:24694064-24694083 MS.gene026145:intron 35.0%
CAATAAGGCCTCATATTCTA+AGG + chr1.2:24692720-24692739 None:intergenic 35.0%
CTCTAGTATTCAAAGTGAAG+AGG - chr1.2:24692077-24692096 MS.gene026145:CDS 35.0%
GAACATTAACCAACCAACTA+TGG - chr1.2:24694564-24694583 MS.gene026145:CDS 35.0%
GCAAGTTCAATACATTAGCT+AGG + chr1.2:24693360-24693379 None:intergenic 35.0%
TATACCTGAATAAGCAGCAA+TGG + chr1.2:24692490-24692509 None:intergenic 35.0%
TCGCAAATTCGTGAAAGTTA+GGG + chr1.2:24693421-24693440 None:intergenic 35.0%
TCTTCATAATATGCTTCGGT+TGG - chr1.2:24692520-24692539 MS.gene026145:CDS 35.0%
TTACAACTATGATCCAACCA+TGG - chr1.2:24692210-24692229 MS.gene026145:CDS 35.0%
TTCGAATATATGTATGAGGC+GGG + chr1.2:24693306-24693325 None:intergenic 35.0%
! AGTAGAAGGTTTGGTTATAC+CGG - chr1.2:24694483-24694502 MS.gene026145:CDS 35.0%
! ATAATATGCTTCGGTTGGTT+TGG - chr1.2:24692525-24692544 MS.gene026145:CDS 35.0%
! ATCGCAACTTTGAGAAAGTT+TGG - chr1.2:24693662-24693681 MS.gene026145:intron 35.0%
! CTTTCACGAATTTGCGATTT+TGG - chr1.2:24693424-24693443 MS.gene026145:intron 35.0%
! CTTTCTCAAAGTTGCGATTT+TGG + chr1.2:24693660-24693679 None:intergenic 35.0%
! GTGTTTTATCATCCATTTGC+AGG - chr1.2:24692283-24692302 MS.gene026145:CDS 35.0%
! TATTTAAAATTGCCCTTGGG+GGG + chr1.2:24693508-24693527 None:intergenic 35.0%
! TCGCAACTTTGAGAAAGTTT+GGG - chr1.2:24693663-24693682 MS.gene026145:intron 35.0%
!! GACCAAGTCAAAATTGGTTT+TGG - chr1.2:24693571-24693590 MS.gene026145:intron 35.0%
!! TAATATGCTTCGGTTGGTTT+GGG - chr1.2:24692526-24692545 MS.gene026145:CDS 35.0%
!! TGGATGAACAAGATGGATTA+CGG - chr1.2:24692164-24692183 MS.gene026145:CDS 35.0%
!!! CAAGTCAAAATTGGTTTTGG+GGG - chr1.2:24693574-24693593 MS.gene026145:intron 35.0%
!!! CCAAGTCAAAATTGGTTTTG+GGG - chr1.2:24693573-24693592 MS.gene026145:intron 35.0%
!!! CGTGTTTTGGAGGTTTTTAT+AGG + chr1.2:24692888-24692907 None:intergenic 35.0%
!!! GGTTTTAGAGAGGTTGATTT+CGG - chr1.2:24694379-24694398 MS.gene026145:CDS 35.0%
!!! TAAACATGCTGGTTTTAGAG+AGG - chr1.2:24694369-24694388 MS.gene026145:CDS 35.0%
!!! TTGGCATATTTTTAGAACCG+TGG - chr1.2:24693023-24693042 MS.gene026145:intron 35.0%
AAATCCTCACTGCATTCCTT+TGG - chr1.2:24694152-24694171 MS.gene026145:intron 40.0%
AACTAGCATCACTCATCCTA+TGG + chr1.2:24693862-24693881 None:intergenic 40.0%
AGCGTAGACCAAGTCAAAAT+TGG - chr1.2:24693565-24693584 MS.gene026145:intron 40.0%
AGGACATGCGAGAAATCAAT+TGG + chr1.2:24692827-24692846 None:intergenic 40.0%
AGGGTGCACGAGAAATTAAT+AGG - chr1.2:24692938-24692957 MS.gene026145:intron 40.0%
AGTAACCGTTTGGTAAGGAT+GGG + chr1.2:24694255-24694274 None:intergenic 40.0%
ATCCATTTGCAGGTAGATTG+AGG - chr1.2:24692293-24692312 MS.gene026145:CDS 40.0%
ATGCGAGAAATCAATTGGGT+GGG + chr1.2:24692822-24692841 None:intergenic 40.0%
ATTAACCAACCAACTATGGG+TGG - chr1.2:24694568-24694587 MS.gene026145:CDS 40.0%
CAGAGAATTGTGGCATGTAA+AGG + chr1.2:24694052-24694071 None:intergenic 40.0%
CGCAAATTCGTGAAAGTTAG+GGG + chr1.2:24693420-24693439 None:intergenic 40.0%
CGGATGTGTCTATAAGTCAA+CGG + chr1.2:24692595-24692614 None:intergenic 40.0%
CTTGAAGTGAAATTGTGTGC+AGG - chr1.2:24693790-24693809 MS.gene026145:intron 40.0%
GAAGAAAGAGCAGAGAATTG+TGG + chr1.2:24694062-24694081 None:intergenic 40.0%
GCAAATTCGTGAAAGTTAGG+GGG + chr1.2:24693419-24693438 None:intergenic 40.0%
GGACATGCGAGAAATCAATT+GGG + chr1.2:24692826-24692845 None:intergenic 40.0%
TAGGATGAGTGATGCTAGTT+TGG - chr1.2:24693862-24693881 MS.gene026145:intron 40.0%
TAGTAACCGTTTGGTAAGGA+TGG + chr1.2:24694256-24694275 None:intergenic 40.0%
TATAGAAGCTGATCCAAGCA+AGG + chr1.2:24692433-24692452 None:intergenic 40.0%
TCACCACAGTAAAATGAGGT+CGG + chr1.2:24694327-24694346 None:intergenic 40.0%
TCCATTTGCAGGTAGATTGA+GGG - chr1.2:24692294-24692313 MS.gene026145:CDS 40.0%
TCCTTACCAAACGGTTACTA+CGG - chr1.2:24694256-24694275 MS.gene026145:CDS 40.0%
TGCTAAAGGAGTAGAAGGTT+TGG - chr1.2:24694474-24694493 MS.gene026145:CDS 40.0%
TGGCACAGTTGCAAAACTTA+GGG + chr1.2:24693478-24693497 None:intergenic 40.0%
TTGCTCTTCGTCTAAACCAT+AGG - chr1.2:24693843-24693862 MS.gene026145:intron 40.0%
! CCTTGAAGCTTTTGCTTTGA+CGG - chr1.2:24692796-24692815 MS.gene026145:CDS 40.0%
! GTGGTTGATGTTAAACATGC+TGG - chr1.2:24694358-24694377 MS.gene026145:CDS 40.0%
! TAGAGAGGTTGATTTCGGTT+GGG - chr1.2:24694384-24694403 MS.gene026145:CDS 40.0%
! TTAGAGAGGTTGATTTCGGT+TGG - chr1.2:24694383-24694402 MS.gene026145:CDS 40.0%
! TTTTGCAACTGTGCCAGTTT+TGG - chr1.2:24693482-24693501 MS.gene026145:intron 40.0%
!! TTAGAGTGTTGTTGTTGGTG+AGG + chr1.2:24694127-24694146 None:intergenic 40.0%
!!! CCCCAAAACCAATTTTGACT+TGG + chr1.2:24693576-24693595 None:intergenic 40.0%
!!! TCATGAGGTGTTGGTTTTGA+TGG + chr1.2:24692124-24692143 None:intergenic 40.0%
AACTATGATCCAACCATGGC+AGG - chr1.2:24692214-24692233 MS.gene026145:CDS 45.0%
AATACGTGGCACCTCTCTTA+TGG - chr1.2:24693533-24693552 MS.gene026145:intron 45.0%
ACACTCTCACACAAATCCCA+GGG - chr1.2:24692630-24692649 MS.gene026145:CDS 45.0%
ACTATGATCCAACCATGGCA+GGG - chr1.2:24692215-24692234 MS.gene026145:CDS 45.0%
AGCTGATCCAAGCAAGGAAA+TGG + chr1.2:24692427-24692446 None:intergenic 45.0%
CAATTGTACGACAACGCCAA+AGG + chr1.2:24694171-24694190 None:intergenic 45.0%
CAGCTTCTATACGATGTTCC+TGG - chr1.2:24692442-24692461 MS.gene026145:CDS 45.0%
CAGGTAACACGTCTTAAGTG+TGG - chr1.2:24693809-24693828 MS.gene026145:intron 45.0%
CATGCGAGAAATCAATTGGG+TGG + chr1.2:24692823-24692842 None:intergenic 45.0%
CCAGACATGGATGAACAAGA+TGG - chr1.2:24692157-24692176 MS.gene026145:CDS 45.0%
CCATCTTGTTCATCCATGTC+TGG + chr1.2:24692160-24692179 None:intergenic 45.0%
CCGTCAAAGCAAAAGCTTCA+AGG + chr1.2:24692799-24692818 None:intergenic 45.0%
CCTTGGGCGAAATATCTCAT+GGG - chr1.2:24693900-24693919 MS.gene026145:intron 45.0%
CGATGAGTGCATGTTACTCT+TGG + chr1.2:24693986-24694005 None:intergenic 45.0%
CTAAGCATATCTGAGGAACC+AGG + chr1.2:24692463-24692482 None:intergenic 45.0%
CTCTTTAGTGAACCTCTCCA+TGG + chr1.2:24694527-24694546 None:intergenic 45.0%
CTGGCACAGTTGCAAAACTT+AGG + chr1.2:24693479-24693498 None:intergenic 45.0%
GAAACAACTCCTCCTTTAGC+TGG + chr1.2:24694430-24694449 None:intergenic 45.0%
GCACAGTTGCAAAACTTAGG+GGG + chr1.2:24693476-24693495 None:intergenic 45.0%
GCTCTCACCACAGTAAAATG+AGG + chr1.2:24694331-24694350 None:intergenic 45.0%
GGAGAGGTTCACTAAAGAGT+TGG - chr1.2:24694528-24694547 MS.gene026145:CDS 45.0%
GGCACAGTTGCAAAACTTAG+GGG + chr1.2:24693477-24693496 None:intergenic 45.0%
GGTTGGGGAAAACCTTGTTA+TGG - chr1.2:24694400-24694419 MS.gene026145:CDS 45.0%
GTAACACGTCTTAAGTGTGG+TGG - chr1.2:24693812-24693831 MS.gene026145:intron 45.0%
GTCCAATTCATGAGTGCCTT+GGG - chr1.2:24693884-24693903 MS.gene026145:intron 45.0%
TCAACCATAAGTTTCCTGCC+AGG + chr1.2:24692325-24692344 None:intergenic 45.0%
TCATCCTCCATTTCCTTGCT+TGG - chr1.2:24692417-24692436 MS.gene026145:CDS 45.0%
TCCCTCAATCTACCTGCAAA+TGG + chr1.2:24692298-24692317 None:intergenic 45.0%
TGAGTGCATGTTACTCTTGG+TGG + chr1.2:24693983-24694002 None:intergenic 45.0%
TGATCCAAGCAAGGAAATGG+AGG + chr1.2:24692424-24692443 None:intergenic 45.0%
TGCCACACGTGCAAAACTTA+GGG - chr1.2:24693604-24693623 MS.gene026145:intron 45.0%
TGTTATGGAGGACCAGCTAA+AGG - chr1.2:24694415-24694434 MS.gene026145:CDS 45.0%
TTAGCTGGTCCTCCATAACA+AGG + chr1.2:24694415-24694434 None:intergenic 45.0%
TTGTTTGCCAACTCAAGCCA+TGG - chr1.2:24694507-24694526 MS.gene026145:CDS 45.0%
TTTGCAGGTAGATTGAGGGA+AGG - chr1.2:24692298-24692317 MS.gene026145:CDS 45.0%
! AGAGAGGTTGATTTCGGTTG+GGG - chr1.2:24694385-24694404 MS.gene026145:CDS 45.0%
! CACTCCATTGCTGCTTATTC+AGG - chr1.2:24692483-24692502 MS.gene026145:CDS 45.0%
! TGGAGTGCTAAGCATATCTG+AGG + chr1.2:24692470-24692489 None:intergenic 45.0%
! TGGGGAAAACCTTGTTATGG+AGG - chr1.2:24694403-24694422 MS.gene026145:CDS 45.0%
! TGTGGTGAGAGCATATCTAG+TGG - chr1.2:24694339-24694358 MS.gene026145:CDS 45.0%
! TTTTGCACGTGTGGCAGTTT+TGG + chr1.2:24693600-24693619 None:intergenic 45.0%
!! CTTCGGTTGGTTTGGGTATT+GGG - chr1.2:24692533-24692552 MS.gene026145:CDS 45.0%
!! GCTTGAGTTGGCAAACAAAC+CGG + chr1.2:24694505-24694524 None:intergenic 45.0%
AACCTCTCCATGGCTTGAGT+TGG + chr1.2:24694517-24694536 None:intergenic 50.0%
AACGCCAAAGGAATGCAGTG+AGG + chr1.2:24694159-24694178 None:intergenic 50.0%
AACTGGATCTTTCCCTGCCA+TGG + chr1.2:24692230-24692249 None:intergenic 50.0%
AGGTCCTGGCAGGAAACTTA+TGG - chr1.2:24692318-24692337 MS.gene026145:CDS 50.0%
AGTGTGTTTGTGCGCATGTG+CGG + chr1.2:24692615-24692634 None:intergenic 50.0%
CAAAATTATTGGGCCGCCCT+GGG + chr1.2:24692649-24692668 None:intergenic 50.0%
CACACTCTCACACAAATCCC+AGG - chr1.2:24692629-24692648 MS.gene026145:CDS 50.0%
CAGTTGCAAAACTTAGGGGG+CGG + chr1.2:24693473-24693492 None:intergenic 50.0%
CCCATGAGATATTTCGCCCA+AGG + chr1.2:24693903-24693922 None:intergenic 50.0%
CGAACTTCTTCGTCGATGTC+TGG + chr1.2:24694202-24694221 None:intergenic 50.0%
CGAATTGCAGCTACCTCAGT+GGG + chr1.2:24694091-24694110 None:intergenic 50.0%
CTCGCATGTCCTATGCAGTT+CGG - chr1.2:24692835-24692854 MS.gene026145:CDS 50.0%
CTGCCACACGTGCAAAACTT+AGG - chr1.2:24693603-24693622 MS.gene026145:intron 50.0%
GCCACACGTGCAAAACTTAG+GGG - chr1.2:24693605-24693624 MS.gene026145:intron 50.0%
GCCGTAGTAACCGTTTGGTA+AGG + chr1.2:24694260-24694279 None:intergenic 50.0%
GCCTTGGGCGAAATATCTCA+TGG - chr1.2:24693899-24693918 MS.gene026145:intron 50.0%
GGTCCAATTCATGAGTGCCT+TGG - chr1.2:24693883-24693902 MS.gene026145:intron 50.0%
GTGTTGCCGTAGTAACCGTT+TGG + chr1.2:24694265-24694284 None:intergenic 50.0%
GTTCGCATAGTCAACGTGCA+TGG - chr1.2:24694217-24694236 MS.gene026145:CDS 50.0%
TATGGAGGACCAGCTAAAGG+AGG - chr1.2:24694418-24694437 MS.gene026145:CDS 50.0%
TCAAAATTATTGGGCCGCCC+TGG + chr1.2:24692650-24692669 None:intergenic 50.0%
TTGGACCACCCATAGTTGGT+TGG + chr1.2:24694576-24694595 None:intergenic 50.0%
TTTCTTCTTCGGTCCCACTG+AGG - chr1.2:24694075-24694094 MS.gene026145:intron 50.0%
! CACTTTTGCATCTCCTGCTG+CGG - chr1.2:24694282-24694301 MS.gene026145:CDS 50.0%
! GAGCCGACCTCATTTTACTG+TGG - chr1.2:24694321-24694340 MS.gene026145:CDS 50.0%
! GAGTGTTGTTGTTGGTGAGG+TGG + chr1.2:24694124-24694143 None:intergenic 50.0%
! TCCCCTAAGTTTTGCACGTG+TGG + chr1.2:24693609-24693628 None:intergenic 50.0%
!! GCTTCGGTTGGTTTGGGTAT+TGG - chr1.2:24692532-24692551 MS.gene026145:CDS 50.0%
!!! GGTTTTGGACCACCCATAGT+TGG + chr1.2:24694580-24694599 None:intergenic 50.0%
ACTGCAGTTGTAACCGCAGC+AGG + chr1.2:24694298-24694317 None:intergenic 55.0%
CTCTCACACAAATCCCAGGG+CGG - chr1.2:24692633-24692652 MS.gene026145:CDS 55.0%
CTGACGTGGCACCATAAGAG+AGG + chr1.2:24693547-24693566 None:intergenic 55.0%
GCGAATTGCAGCTACCTCAG+TGG + chr1.2:24694092-24694111 None:intergenic 55.0%
GGATCTTTCCCTGCCATGGT+TGG + chr1.2:24692226-24692245 None:intergenic 55.0%
GGTAGATTGAGGGAAGGTCC+TGG - chr1.2:24692304-24692323 MS.gene026145:CDS 55.0%
TGCCAACTCAAGCCATGGAG+AGG - chr1.2:24694512-24694531 MS.gene026145:CDS 55.0%
! CGCCCAAGGCACTCATGAAT+TGG + chr1.2:24693889-24693908 None:intergenic 55.0%
!! TGACTTGGTCTACGCTGACG+TGG + chr1.2:24693561-24693580 None:intergenic 55.0%
GATTGAGGGAAGGTCCTGGC+AGG - chr1.2:24692308-24692327 MS.gene026145:CDS 60.0%
!! TGCCAGTTTTGGCCCCCCAA+GGG - chr1.2:24693493-24693512 MS.gene026145:intron 60.0%
TGCCCTTGGGGGGCCAAAAC+TGG + chr1.2:24693498-24693517 None:intergenic 65.0%
!! GTGCCAGTTTTGGCCCCCCA+AGG - chr1.2:24693492-24693511 MS.gene026145:intron 65.0%


Chromosome Type Strat End Strand Name
chr1.2 gene 24692067 24694624 24692067 ID=MS.gene026145
chr1.2 mRNA 24692067 24694624 24692067 ID=MS.gene026145.t1;Parent=MS.gene026145
chr1.2 exon 24694187 24694624 24694187 ID=MS.gene026145.t1.exon1;Parent=MS.gene026145.t1
chr1.2 CDS 24694187 24694624 24694187 ID=cds.MS.gene026145.t1;Parent=MS.gene026145.t1
chr1.2 exon 24692067 24692879 24692067 ID=MS.gene026145.t1.exon2;Parent=MS.gene026145.t1
chr1.2 CDS 24692067 24692879 24692067 ID=cds.MS.gene026145.t1;Parent=MS.gene026145.t1
Gene Sequence

>MS.gene026145

ATGGCCCAATCTCTAGTATTCAAAGTGAAGAGGCGTGTCCTTGAATTTGTAAAACCATCAAAACCAACACCTCATGAAAGAAAATTACTTCCAGACATGGATGAACAAGATGGATTACGGTATCAAATGCCTGTGATACAATTTTACAACTATGATCCAACCATGGCAGGGAAAGATCCAGTTGATATTATTAGAAAAGCATTAGCAAAAACACTCGTGTTTTATCATCCATTTGCAGGTAGATTGAGGGAAGGTCCTGGCAGGAAACTTATGGTTGATTGTAATGGTGAAGGTGCTTTGTTCATTGAAGCTGATGCTGATGTTACTCTTATACAATTTGGTGATGCTCTTCATCCTCCATTTCCTTGCTTGGATCAGCTTCTATACGATGTTCCTGGTTCCTCAGATATGCTTAGCACTCCATTGCTGCTTATTCAGGTATAGTTTTTTTAGTCTTCATAATATGCTTCGGTTGGTTTGGGTATTGGGTTTGAAATTTTAAACCAAGATATCTGTGAATCTAATCCGTTGACTTATAGACACATCCGCACATGCGCACAAACACACTCTCACACAAATCCCAGGGCGGCCCAATAATTTTGAAAAGAAAATGAGGTCAAAAGTAAGGTTGAATATATGAGGCTTTTTTCCCTTAGAATATGAGGCCTTATTGCTTGTAAAATCTAATGAAAAATATTATTTTCATGCTTTATGCTTTGATGGCCTTAACCTTGAAGCTTTTGCTTTGACGGCCCACCCAATTGATTTCTCGCATGTCCTATGCAGTTCGGATTATATAATTCGAACGACATAATCACCCTATAAAAACCTCCAAAACACGTTAAAATATTTCAGATTTTCGAATCTAAATAGGGTGCACGAGAAATTAATAGGATGAGAAAAATAATGACCTAAAAATAAACCCTGCAATTTAACTGTTTTTTAGAGTTTTCTCTTTGGCATATTTTTAGAACCGTGGTTCAATTCAATTATTTCATGTTGGATAAGTTTGGTTTGATTTTAGTGTTAAATTAAAAGTAGGGTTGGAATTGGTTAATTTAAATTTTTTGTGAAATTCAACCCAACCCAACTTATAAACACTATCTATATACAAGTGACTGAATAATTACCGTTCAACAAAAAAAAATGCTAAATAATGTACACTAAGACAACCTATTTTGTATAAATAAATAAGAGAATTGTACCAAAAAAATAAAAAAATAAGAGAAATCAATACCCGCCTCATACATATATTCGAAAAATATGCTAGATCCAAACATAAATATATAACCTAGCTAATGTATTGAACTTGCATTTATTTTAAAAAATAGGCTTAATAGCAGTTTTCGCCCCCTAACTTTCACGAATTTGCGATTTTGGCCCCCAAAGAAAAAACTACAAAACCGCCCCCTAAGTTTTGCAACTGTGCCAGTTTTGGCCCCCCAAGGGCAATTTTAAATAAAAAAAATACGTGGCACCTCTCTTATGGTGCCACGTCAGCGTAGACCAAGTCAAAATTGGTTTTGGGGGCCAAAACTGCCACACGTGCAAAACTTAGGGGACAGTTTTGTAGTTTTTTTTCTTAGGGGGCCAAAATCGCAACTTTGAGAAAGTTTGGGAGATAAAACTGCTATTAAGCCTAAAAAATAATCACATGTGTTTGATTTTGGTCAATTTTTTTTTTTAAATAGATCAATTATATATGTATTCATACATTCACATACTTGAAGTGAAATTGTGTGCAGGTAACACGTCTTAAGTGTGGTGGTTTCATTTTTGCTCTTCGTCTAAACCATAGGATGAGTGATGCTAGTTTGGTCCAATTCATGAGTGCCTTGGGCGAAATATCTCATGGGATGAACAAAACTACAGTCTCACCATTATGGCATAGAGAGTTTCTAAATGCAAGGGATCCACCAAGAGTAACATGCACTCATCGTCGTGAATATGAACAAGTTCCCGACACCAAAGAAACAATTATCCCTTTACATGCCACAATTCTCTGCTCTTTCTTCTTCGGTCCCACTGAGGTAGCTGCAATTCGCACTCTTCTTCCACCTCACCAACAACAACACTCTAATTTTGAAATCCTCACTGCATTCCTTTGGCGTTGTCGTACAATTGCGTTACAACCAGACATCGACGAAGAAGTTCGCATAGTCAACGTGCATGGCAAGTTTATTAACCCATCCTTACCAAACGGTTACTACGGCAACACTTTTGCATCTCCTGCTGCGGTTACAACTGCAGTAAAGAGCCGACCTCATTTTACTGTGGTGAGAGCATATCTAGTGGTTGATGTTAAACATGCTGGTTTTAGAGAGGTTGATTTCGGTTGGGGAAAACCTTGTTATGGAGGACCAGCTAAAGGAGGAGTTGTTTCTAGTTCGTATATACCTTTTAAAAATGCTAAAGGAGTAGAAGGTTTGGTTATACCGGTTTGTTTGCCAACTCAAGCCATGGAGAGGTTCACTAAAGAGTTGGATAGTGTGTTTAAGAACATTAACCAACCAACTATGGGTGGTCCAAAACCTAGTATCATTATTTCTTCCTTGTAG
Protein sequence

>MS.gene026145.t1

MAQSLVFKVKRRVLEFVKPSKPTPHERKLLPDMDEQDGLRYQMPVIQFYNYDPTMAGKDPVDIIRKALAKTLVFYHPFAGRLREGPGRKLMVDCNGEGALFIEADADVTLIQFGDALHPPFPCLDQLLYDVPGSSDMLSTPLLLIQVTRLKCGGFIFALRLNHRMSDASLVQFMSALGEISHGMNKTTVSPLWHREFLNARDPPRVTCTHRREYEQVPDTKETIIPLHATILCSFFFGPTEVAAIRTLLPPHQQQHSNFEILTAFLWRCRTIALQPDIDEEVRIVNVHGKFINPSLPNGYYGNTFASPAAVTTAVKSRPHFTVVRAYLVVDVKHAGFREVDFGWGKPCYGGPAKGGVVSSSYIPFKNAKGVEGLVIPVCLPTQAMERFTKELDSVFKNINQPTMGGPKPSIIISSL