Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene027262.t1 | XP_003626389.2 | 93.2 | 459 | 31 | 0 | 1 | 459 | 1 | 459 | 2.10E-251 | 877.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene027262.t1 | Q8GT20 | 60.5 | 441 | 168 | 4 | 3 | 441 | 6 | 442 | 1.2e-154 | 547.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene027262.t1 | G7L0T6 | 93.2 | 459 | 31 | 0 | 1 | 459 | 1 | 459 | 1.5e-251 | 877.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene38361 | MS.gene027262 | PPI |
| MS.gene38701 | MS.gene027262 | PPI |
| MS.gene38359 | MS.gene027262 | PPI |
| MS.gene038905 | MS.gene027262 | PPI |
| MS.gene32933 | MS.gene027262 | PPI |
| MS.gene38365 | MS.gene027262 | PPI |
| MS.gene012965 | MS.gene027262 | PPI |
| MS.gene95242 | MS.gene027262 | PPI |
| MS.gene32936 | MS.gene027262 | PPI |
| MS.gene069436 | MS.gene027262 | PPI |
| MS.gene32938 | MS.gene027262 | PPI |
| MS.gene38362 | MS.gene027262 | PPI |
| MS.gene38699 | MS.gene027262 | PPI |
| MS.gene38702 | MS.gene027262 | PPI |
| MS.gene38363 | MS.gene027262 | PPI |
| MS.gene039597 | MS.gene027262 | PPI |
| MS.gene66891 | MS.gene027262 | PPI |
| MS.gene38704 | MS.gene027262 | PPI |
| MS.gene38703 | MS.gene027262 | PPI |
| MS.gene069321 | MS.gene027262 | PPI |
| MS.gene38706 | MS.gene027262 | PPI |
| MS.gene32934 | MS.gene027262 | PPI |
| MS.gene012961 | MS.gene027262 | PPI |
| MS.gene046246 | MS.gene027262 | PPI |
| MS.gene012959 | MS.gene027262 | PPI |
| MS.gene027262 | MS.gene042317 | PPI |
| MS.gene38700 | MS.gene027262 | PPI |
| MS.gene012960 | MS.gene027262 | PPI |
| MS.gene012957 | MS.gene027262 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene027262.t1 | MTR_7g114560 | 93.246 | 459 | 31 | 0 | 1 | 459 | 1 | 459 | 0.0 | 894 |
| MS.gene027262.t1 | MTR_7g114550 | 91.503 | 459 | 39 | 0 | 1 | 459 | 1 | 459 | 0.0 | 887 |
| MS.gene027262.t1 | MTR_5g076700 | 80.000 | 460 | 91 | 1 | 1 | 459 | 1 | 460 | 0.0 | 773 |
| MS.gene027262.t1 | MTR_7g114490 | 82.679 | 433 | 75 | 0 | 1 | 433 | 1 | 433 | 0.0 | 767 |
| MS.gene027262.t1 | MTR_7g114520 | 78.355 | 462 | 97 | 3 | 1 | 459 | 1 | 462 | 0.0 | 760 |
| MS.gene027262.t1 | MTR_7g114470 | 76.623 | 462 | 105 | 3 | 1 | 459 | 1 | 462 | 0.0 | 749 |
| MS.gene027262.t1 | MTR_1g040195 | 55.484 | 465 | 169 | 7 | 3 | 459 | 2 | 436 | 0.0 | 528 |
| MS.gene027262.t1 | MTR_1g040215 | 53.778 | 450 | 201 | 6 | 3 | 448 | 2 | 448 | 1.40e-180 | 513 |
| MS.gene027262.t1 | MTR_1g040175 | 52.609 | 460 | 212 | 5 | 3 | 459 | 2 | 458 | 5.90e-179 | 508 |
| MS.gene027262.t1 | MTR_1g081660 | 57.303 | 445 | 185 | 4 | 3 | 445 | 11 | 452 | 5.76e-178 | 506 |
| MS.gene027262.t1 | MTR_7g114510 | 73.248 | 314 | 83 | 1 | 147 | 459 | 7 | 320 | 5.50e-173 | 488 |
| MS.gene027262.t1 | MTR_1g040320 | 52.252 | 444 | 172 | 5 | 3 | 444 | 2 | 407 | 7.23e-166 | 474 |
| MS.gene027262.t1 | MTR_1g040315 | 49.892 | 461 | 182 | 7 | 3 | 459 | 2 | 417 | 3.97e-155 | 446 |
| MS.gene027262.t1 | MTR_7g114420 | 68.814 | 295 | 64 | 2 | 166 | 459 | 1 | 268 | 7.54e-143 | 409 |
| MS.gene027262.t1 | MTR_0042s0190 | 52.113 | 284 | 126 | 5 | 166 | 444 | 1 | 279 | 4.25e-100 | 301 |
| MS.gene027262.t1 | MTR_7g114500 | 82.237 | 152 | 27 | 0 | 1 | 152 | 1 | 152 | 2.05e-87 | 264 |
| MS.gene027262.t1 | MTR_0502s0010 | 54.065 | 246 | 100 | 5 | 101 | 340 | 1 | 239 | 7.42e-82 | 253 |
| MS.gene027262.t1 | MTR_3g051790 | 78.378 | 148 | 32 | 0 | 1 | 148 | 4 | 151 | 5.88e-79 | 243 |
| MS.gene027262.t1 | MTR_0042s0190 | 52.558 | 215 | 99 | 3 | 232 | 444 | 1 | 214 | 9.23e-77 | 239 |
| MS.gene027262.t1 | MTR_8g096530 | 33.676 | 389 | 243 | 8 | 8 | 390 | 5 | 384 | 1.26e-72 | 236 |
| MS.gene027262.t1 | MTR_3g098980 | 31.382 | 427 | 278 | 8 | 10 | 433 | 14 | 428 | 3.43e-71 | 232 |
| MS.gene027262.t1 | MTR_0042s0230 | 63.014 | 146 | 54 | 0 | 3 | 148 | 2 | 147 | 1.00e-65 | 208 |
| MS.gene027262.t1 | MTR_7g027175 | 31.332 | 383 | 252 | 6 | 14 | 392 | 20 | 395 | 6.22e-65 | 216 |
| MS.gene027262.t1 | MTR_8g039950 | 65.354 | 127 | 44 | 0 | 3 | 129 | 2 | 128 | 3.64e-60 | 193 |
| MS.gene027262.t1 | MTR_3g112180 | 32.741 | 394 | 237 | 13 | 13 | 392 | 14 | 393 | 5.58e-54 | 187 |
| MS.gene027262.t1 | MTR_1g053315 | 29.748 | 437 | 285 | 14 | 18 | 437 | 26 | 457 | 5.64e-52 | 182 |
| MS.gene027262.t1 | MTR_4g055170 | 28.829 | 444 | 285 | 14 | 17 | 438 | 19 | 453 | 1.21e-49 | 176 |
| MS.gene027262.t1 | MTR_2g105330 | 28.904 | 429 | 280 | 11 | 17 | 433 | 10 | 425 | 1.27e-49 | 175 |
| MS.gene027262.t1 | MTR_2g064495 | 28.671 | 429 | 281 | 11 | 17 | 433 | 10 | 425 | 1.51e-48 | 172 |
| MS.gene027262.t1 | MTR_4g007540 | 28.710 | 411 | 264 | 11 | 42 | 437 | 34 | 430 | 2.68e-46 | 166 |
| MS.gene027262.t1 | MTR_3g035000 | 38.367 | 245 | 108 | 8 | 200 | 432 | 43 | 256 | 3.63e-42 | 152 |
| MS.gene027262.t1 | MTR_8g075610 | 27.603 | 413 | 273 | 11 | 36 | 437 | 19 | 416 | 1.75e-41 | 153 |
| MS.gene027262.t1 | MTR_3g071320 | 29.000 | 400 | 259 | 11 | 9 | 392 | 4 | 394 | 8.62e-40 | 148 |
| MS.gene027262.t1 | MTR_7g110610 | 28.611 | 360 | 178 | 12 | 6 | 347 | 1 | 299 | 1.34e-37 | 141 |
| MS.gene027262.t1 | MTR_3g465930 | 29.851 | 335 | 220 | 7 | 17 | 339 | 17 | 348 | 2.54e-37 | 142 |
| MS.gene027262.t1 | MTR_2g015430 | 29.412 | 425 | 268 | 15 | 31 | 434 | 25 | 438 | 3.91e-37 | 141 |
| MS.gene027262.t1 | MTR_4g127650 | 25.708 | 459 | 294 | 15 | 9 | 437 | 11 | 452 | 1.29e-35 | 137 |
| MS.gene027262.t1 | MTR_3g026950 | 27.098 | 417 | 247 | 14 | 18 | 394 | 10 | 409 | 2.33e-35 | 137 |
| MS.gene027262.t1 | MTR_3g465910 | 31.138 | 334 | 214 | 10 | 17 | 339 | 17 | 345 | 2.85e-34 | 135 |
| MS.gene027262.t1 | MTR_7g085930 | 29.363 | 361 | 223 | 14 | 17 | 354 | 13 | 364 | 1.68e-33 | 132 |
| MS.gene027262.t1 | MTR_4g097090 | 24.885 | 434 | 279 | 13 | 36 | 437 | 34 | 452 | 6.35e-33 | 130 |
| MS.gene027262.t1 | MTR_3g465990 | 28.788 | 396 | 248 | 14 | 17 | 389 | 17 | 401 | 1.65e-32 | 129 |
| MS.gene027262.t1 | MTR_3g465980 | 29.262 | 393 | 250 | 14 | 17 | 389 | 17 | 401 | 1.10e-31 | 126 |
| MS.gene027262.t1 | MTR_7g085990 | 28.056 | 360 | 227 | 14 | 16 | 352 | 8 | 358 | 6.42e-31 | 124 |
| MS.gene027262.t1 | MTR_3g049150 | 26.000 | 450 | 283 | 17 | 18 | 435 | 10 | 441 | 2.77e-30 | 122 |
| MS.gene027262.t1 | MTR_6g053810 | 26.434 | 401 | 263 | 16 | 64 | 440 | 70 | 462 | 3.84e-30 | 122 |
| MS.gene027262.t1 | MTR_7g086000 | 25.714 | 420 | 251 | 17 | 47 | 425 | 42 | 441 | 1.07e-29 | 121 |
| MS.gene027262.t1 | MTR_3g465880 | 26.980 | 404 | 252 | 11 | 17 | 389 | 17 | 408 | 2.04e-29 | 120 |
| MS.gene027262.t1 | MTR_7g084940 | 24.219 | 384 | 275 | 9 | 14 | 390 | 20 | 394 | 2.79e-29 | 119 |
| MS.gene027262.t1 | MTR_3g465950 | 29.110 | 292 | 189 | 6 | 60 | 339 | 63 | 348 | 5.35e-28 | 116 |
| MS.gene027262.t1 | MTR_5g090810 | 24.330 | 448 | 293 | 16 | 8 | 421 | 8 | 443 | 5.86e-28 | 116 |
| MS.gene027262.t1 | MTR_5g090830 | 24.554 | 448 | 292 | 16 | 8 | 421 | 8 | 443 | 1.36e-27 | 115 |
| MS.gene027262.t1 | MTR_7g084910 | 25.320 | 391 | 242 | 11 | 17 | 390 | 24 | 381 | 2.95e-27 | 113 |
| MS.gene027262.t1 | MTR_4g013050 | 24.550 | 444 | 254 | 17 | 18 | 433 | 12 | 402 | 6.81e-27 | 112 |
| MS.gene027262.t1 | MTR_5g090880 | 24.378 | 402 | 254 | 14 | 62 | 428 | 64 | 450 | 8.19e-25 | 107 |
| MS.gene027262.t1 | MTR_7g056087 | 23.014 | 365 | 242 | 11 | 17 | 356 | 11 | 361 | 1.97e-23 | 102 |
| MS.gene027262.t1 | MTR_3g051820 | 65.517 | 87 | 29 | 1 | 373 | 459 | 6 | 91 | 2.71e-23 | 94.0 |
| MS.gene027262.t1 | MTR_3g465870 | 28.231 | 294 | 192 | 8 | 17 | 296 | 19 | 307 | 3.20e-23 | 102 |
| MS.gene027262.t1 | MTR_8g041770 | 23.059 | 438 | 299 | 14 | 13 | 436 | 20 | 433 | 3.35e-23 | 102 |
| MS.gene027262.t1 | MTR_3g450710 | 24.093 | 386 | 239 | 13 | 43 | 390 | 43 | 412 | 1.67e-22 | 100 |
| MS.gene027262.t1 | MTR_7g114417 | 80.000 | 55 | 10 | 1 | 90 | 143 | 29 | 83 | 2.99e-22 | 90.9 |
| MS.gene027262.t1 | MTR_7g114417 | 90.476 | 42 | 4 | 0 | 1 | 42 | 1 | 42 | 6.57e-18 | 78.6 |
| MS.gene027262.t1 | MTR_3g450690 | 24.438 | 356 | 228 | 11 | 65 | 390 | 72 | 416 | 5.11e-22 | 99.0 |
| MS.gene027262.t1 | MTR_3g101960 | 25.400 | 437 | 282 | 16 | 24 | 439 | 30 | 443 | 1.41e-21 | 97.4 |
| MS.gene027262.t1 | MTR_5g026320 | 24.337 | 415 | 275 | 16 | 8 | 399 | 16 | 414 | 4.89e-21 | 95.9 |
| MS.gene027262.t1 | MTR_5g084870 | 23.750 | 400 | 249 | 15 | 16 | 390 | 9 | 377 | 3.84e-19 | 89.7 |
| MS.gene027262.t1 | MTR_3g102020 | 24.941 | 425 | 282 | 17 | 25 | 430 | 31 | 437 | 1.33e-18 | 88.2 |
| MS.gene027262.t1 | MTR_4g088765 | 46.154 | 78 | 42 | 0 | 3 | 80 | 2 | 79 | 2.72e-18 | 80.9 |
| MS.gene027262.t1 | MTR_1g094790 | 23.474 | 426 | 269 | 16 | 16 | 408 | 9 | 410 | 3.33e-18 | 87.0 |
| MS.gene027262.t1 | MTR_3g070170 | 23.040 | 421 | 277 | 14 | 54 | 439 | 55 | 463 | 3.79e-18 | 87.0 |
| MS.gene027262.t1 | MTR_8g079980 | 22.727 | 462 | 272 | 18 | 16 | 438 | 9 | 424 | 3.47e-17 | 84.0 |
| MS.gene027262.t1 | MTR_8g079950 | 30.058 | 173 | 101 | 7 | 16 | 180 | 9 | 169 | 4.99e-17 | 83.6 |
| MS.gene027262.t1 | MTR_3g102010 | 23.937 | 447 | 284 | 16 | 25 | 444 | 32 | 449 | 6.31e-17 | 83.2 |
| MS.gene027262.t1 | MTR_8g079970 | 30.814 | 172 | 101 | 6 | 16 | 180 | 9 | 169 | 1.50e-16 | 82.0 |
| MS.gene027262.t1 | MTR_5g084850 | 27.530 | 247 | 144 | 9 | 16 | 251 | 9 | 231 | 2.83e-16 | 81.3 |
| MS.gene027262.t1 | MTR_3g101930 | 24.368 | 435 | 275 | 18 | 37 | 443 | 44 | 452 | 1.53e-15 | 79.0 |
| MS.gene027262.t1 | MTR_4g022720 | 22.558 | 430 | 289 | 17 | 24 | 436 | 25 | 427 | 3.31e-15 | 77.8 |
| MS.gene027262.t1 | MTR_6g045553 | 21.903 | 452 | 274 | 16 | 42 | 436 | 38 | 467 | 3.39e-15 | 78.2 |
| MS.gene027262.t1 | MTR_8g467580 | 22.494 | 449 | 295 | 17 | 16 | 435 | 9 | 433 | 4.02e-15 | 77.8 |
| MS.gene027262.t1 | MTR_3g101970 | 22.356 | 416 | 286 | 12 | 27 | 430 | 33 | 423 | 4.11e-15 | 77.4 |
| MS.gene027262.t1 | MTR_4g022825 | 24.362 | 431 | 265 | 17 | 24 | 426 | 25 | 422 | 5.73e-15 | 77.0 |
| MS.gene027262.t1 | MTR_4g094838 | 22.991 | 448 | 281 | 17 | 24 | 451 | 29 | 432 | 1.54e-14 | 75.9 |
| MS.gene027262.t1 | MTR_3g100150 | 22.518 | 413 | 262 | 13 | 49 | 440 | 49 | 424 | 7.13e-14 | 73.9 |
| MS.gene027262.t1 | MTR_8g467590 | 29.189 | 185 | 115 | 8 | 16 | 193 | 9 | 184 | 1.35e-13 | 72.8 |
| MS.gene027262.t1 | MTR_2g036780 | 20.519 | 424 | 275 | 12 | 49 | 446 | 50 | 437 | 1.89e-13 | 72.4 |
| MS.gene027262.t1 | MTR_7g026860 | 23.112 | 437 | 281 | 18 | 24 | 436 | 25 | 430 | 2.89e-13 | 72.0 |
| MS.gene027262.t1 | MTR_8g079710 | 22.066 | 426 | 281 | 16 | 24 | 426 | 30 | 427 | 4.46e-13 | 71.2 |
| MS.gene027262.t1 | MTR_4g022290 | 23.267 | 404 | 244 | 18 | 24 | 394 | 31 | 401 | 8.97e-12 | 67.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene027262.t1 | AT5G17540 | 47.742 | 465 | 230 | 8 | 3 | 459 | 2 | 461 | 2.40e-149 | 433 |
| MS.gene027262.t1 | AT3G03480 | 49.099 | 444 | 217 | 7 | 2 | 441 | 11 | 449 | 1.84e-142 | 416 |
| MS.gene027262.t1 | AT3G48720 | 31.121 | 437 | 284 | 10 | 1 | 433 | 1 | 424 | 5.38e-72 | 234 |
| MS.gene027262.t1 | AT5G63560 | 32.915 | 398 | 244 | 9 | 3 | 392 | 2 | 384 | 5.88e-67 | 221 |
| MS.gene027262.t1 | AT5G41040 | 31.156 | 398 | 261 | 7 | 1 | 392 | 8 | 398 | 8.11e-67 | 221 |
| MS.gene027262.t1 | AT5G41040 | 31.156 | 398 | 261 | 7 | 1 | 392 | 24 | 414 | 8.81e-67 | 221 |
| MS.gene027262.t1 | AT1G27620 | 33.333 | 390 | 234 | 12 | 14 | 392 | 13 | 387 | 1.08e-56 | 194 |
| MS.gene027262.t1 | AT1G03390 | 29.464 | 448 | 279 | 16 | 14 | 437 | 21 | 455 | 1.35e-47 | 170 |
| MS.gene027262.t1 | AT5G48930 | 27.955 | 440 | 285 | 12 | 17 | 440 | 10 | 433 | 3.65e-47 | 168 |
| MS.gene027262.t1 | AT5G57840 | 28.947 | 456 | 282 | 13 | 10 | 442 | 3 | 439 | 1.11e-44 | 162 |
| MS.gene027262.t1 | AT2G19070 | 27.716 | 451 | 284 | 13 | 18 | 439 | 12 | 449 | 9.93e-44 | 159 |
| MS.gene027262.t1 | AT2G40230 | 29.442 | 394 | 245 | 14 | 17 | 392 | 12 | 390 | 5.33e-41 | 152 |
| MS.gene027262.t1 | AT3G62160 | 27.751 | 418 | 263 | 12 | 6 | 409 | 1 | 393 | 7.56e-40 | 149 |
| MS.gene027262.t1 | AT1G28680 | 28.499 | 393 | 259 | 13 | 7 | 386 | 1 | 384 | 2.39e-36 | 139 |
| MS.gene027262.t1 | AT1G28680 | 29.201 | 363 | 240 | 11 | 7 | 359 | 1 | 356 | 1.06e-35 | 136 |
| MS.gene027262.t1 | AT5G07080 | 27.873 | 409 | 261 | 13 | 3 | 389 | 7 | 403 | 1.47e-34 | 134 |
| MS.gene027262.t1 | AT1G65450 | 25.455 | 440 | 298 | 13 | 17 | 441 | 25 | 449 | 3.18e-34 | 133 |
| MS.gene027262.t1 | AT3G47170 | 24.897 | 486 | 296 | 18 | 2 | 441 | 4 | 466 | 4.11e-34 | 133 |
| MS.gene027262.t1 | AT2G25150 | 25.862 | 406 | 245 | 15 | 16 | 389 | 19 | 400 | 5.13e-27 | 113 |
| MS.gene027262.t1 | AT1G31490 | 24.755 | 408 | 264 | 13 | 7 | 393 | 3 | 388 | 1.04e-26 | 112 |
| MS.gene027262.t1 | AT2G23510 | 26.961 | 408 | 262 | 16 | 3 | 389 | 6 | 398 | 1.54e-26 | 112 |
| MS.gene027262.t1 | AT1G32910 | 26.150 | 413 | 243 | 16 | 44 | 429 | 46 | 423 | 2.21e-25 | 108 |
| MS.gene027262.t1 | AT1G78990 | 25.527 | 427 | 264 | 16 | 43 | 441 | 45 | 445 | 4.71e-24 | 104 |
| MS.gene027262.t1 | AT3G26040 | 23.558 | 416 | 238 | 16 | 16 | 392 | 9 | 383 | 1.90e-23 | 102 |
| MS.gene027262.t1 | AT4G15390 | 23.195 | 457 | 296 | 17 | 5 | 435 | 3 | 430 | 1.53e-22 | 100 |
| MS.gene027262.t1 | AT4G15390 | 23.195 | 457 | 296 | 17 | 5 | 435 | 3 | 430 | 1.53e-22 | 100 |
| MS.gene027262.t1 | AT5G42830 | 26.411 | 443 | 276 | 18 | 20 | 439 | 27 | 442 | 2.27e-22 | 99.8 |
| MS.gene027262.t1 | AT3G50280 | 25.187 | 401 | 256 | 16 | 24 | 403 | 28 | 405 | 1.79e-21 | 97.1 |
| MS.gene027262.t1 | AT5G47980 | 25.541 | 462 | 287 | 19 | 14 | 449 | 9 | 439 | 2.47e-21 | 96.7 |
| MS.gene027262.t1 | AT1G24420 | 25.847 | 472 | 262 | 17 | 16 | 449 | 11 | 432 | 8.30e-21 | 94.7 |
| MS.gene027262.t1 | AT1G24420 | 25.847 | 472 | 262 | 17 | 16 | 449 | 11 | 432 | 8.30e-21 | 94.7 |
| MS.gene027262.t1 | AT5G07860 | 25.059 | 423 | 272 | 13 | 37 | 439 | 45 | 442 | 1.85e-20 | 94.0 |
| MS.gene027262.t1 | AT5G16410 | 23.601 | 411 | 266 | 16 | 8 | 392 | 34 | 422 | 4.30e-20 | 93.2 |
| MS.gene027262.t1 | AT5G67150 | 25.517 | 435 | 276 | 18 | 24 | 436 | 30 | 438 | 9.98e-20 | 91.7 |
| MS.gene027262.t1 | AT5G07850 | 24.365 | 394 | 272 | 13 | 62 | 440 | 67 | 449 | 8.04e-19 | 89.0 |
| MS.gene027262.t1 | AT3G30280 | 23.476 | 443 | 291 | 16 | 10 | 430 | 6 | 422 | 3.06e-18 | 87.0 |
| MS.gene027262.t1 | AT1G24430 | 23.026 | 456 | 275 | 15 | 16 | 441 | 11 | 420 | 1.17e-17 | 85.5 |
| MS.gene027262.t1 | AT4G31910 | 22.764 | 369 | 249 | 12 | 47 | 386 | 46 | 407 | 1.60e-17 | 85.1 |
| MS.gene027262.t1 | AT5G23970 | 24.625 | 467 | 279 | 19 | 16 | 456 | 9 | 428 | 3.36e-17 | 84.0 |
| MS.gene027262.t1 | AT5G07870 | 24.153 | 443 | 295 | 15 | 22 | 440 | 32 | 457 | 1.09e-16 | 82.8 |
| MS.gene027262.t1 | AT3G50270 | 24.289 | 387 | 250 | 12 | 24 | 387 | 30 | 396 | 1.36e-16 | 82.4 |
| MS.gene027262.t1 | AT2G39980 | 21.928 | 415 | 271 | 10 | 62 | 430 | 59 | 466 | 1.38e-16 | 82.4 |
| MS.gene027262.t1 | AT5G23940 | 25.604 | 414 | 267 | 17 | 52 | 441 | 53 | 449 | 3.17e-16 | 81.3 |
| MS.gene027262.t1 | AT5G47950 | 24.009 | 429 | 277 | 16 | 16 | 430 | 12 | 405 | 3.31e-16 | 80.9 |
| MS.gene027262.t1 | AT3G50300 | 22.527 | 364 | 246 | 12 | 62 | 401 | 56 | 407 | 1.24e-12 | 70.1 |
| MS.gene027262.t1 | AT1G65450 | 22.559 | 297 | 205 | 9 | 158 | 441 | 1 | 285 | 5.58e-12 | 66.6 |
| MS.gene027262.t1 | AT4G15400 | 26.577 | 444 | 269 | 23 | 16 | 436 | 11 | 420 | 4.23e-11 | 65.1 |
Find 0 sgRNAs with CRISPR-Local
Find 257 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TATTTTTTTAATTAATTTTT+TGG | + | 51749:10427-10446 | MS.gene027262:intron | 0.0% |
| !!! | AACTTGATAATTAATATAAT+TGG | - | 51749:10141-10160 | MS.gene027262:intergenic | 10.0% |
| !!! | TACTTTTGAAAAAAAAAATT+AGG | - | 51749:10880-10899 | MS.gene027262:intergenic | 10.0% |
| !!! | TATAATTTATTGGTTTTTAA+CGG | - | 51749:11693-11712 | MS.gene027262:intergenic | 10.0% |
| !! | TATTAAGTAAAGATATATCT+AGG | - | 51749:11870-11889 | MS.gene027262:intergenic | 15.0% |
| !!! | AAATCGAATTATTTTAGTTA+CGG | - | 51749:10823-10804 | MS.gene027262:intergenic | 15.0% |
| !!! | AATTCATATGTTTTCTTTAA+TGG | - | 51749:11765-11784 | MS.gene027262:intergenic | 15.0% |
| !!! | ATTCAAGAATATTATGTTTT+CGG | + | 51749:11207-11226 | MS.gene027262:intron | 15.0% |
| !!! | TAACTAAAATAATTCGATTT+TGG | + | 51749:10503-10522 | MS.gene027262:intron | 15.0% |
| !!! | TAACTAAAATAATTCGATTT+TGG | - | 51749:10522-10503 | MS.gene027262:intergenic | 15.0% |
| !!! | TATTAGATTTAAAATATGAC+AGG | + | 51749:11888-11907 | MS.gene027262:intron | 15.0% |
| !!! | TTGATAGTTTTTTATCATTT+GGG | - | 51749:11564-11583 | MS.gene027262:intergenic | 15.0% |
| !!! | TTTTTCTTAAAAACATATGA+TGG | - | 51749:11327-11346 | MS.gene027262:intergenic | 15.0% |
| !! | AAAACCAATAAATTATAACC+AGG | + | 51749:11696-11715 | MS.gene027262:intron | 20.0% |
| !! | AATAAAAAAATTTACACACC+TGG | + | 51749:10706-10725 | MS.gene027262:intron | 20.0% |
| !! | TATCCATGTTAATAACATAA+AGG | + | 51749:10284-10303 | MS.gene027262:intron | 20.0% |
| !! | TTGTAAACTTGTAATCAATT+CGG | - | 51749:11843-11862 | MS.gene027262:intergenic | 20.0% |
| !!! | AAATTTGTTCGTATTCAAAA+TGG | - | 51749:12104-12123 | MS.gene027262:intergenic | 20.0% |
| !!! | AATCGAATTATTTTAGTTAC+GGG | - | 51749:10502-10521 | MS.gene027262:intergenic | 20.0% |
| !!! | AATCGAATTATTTTAGTTAG+AGG | + | 51749:10805-10824 | MS.gene027262:intron | 20.0% |
| !!! | ATCGAATTATTTTAGTTAGA+GGG | + | 51749:10806-10825 | MS.gene027262:intron | 20.0% |
| !!! | GTTGATAGTTTTTTATCATT+TGG | - | 51749:11565-11584 | MS.gene027262:intergenic | 20.0% |
| ! | AAGCCTTTATGTTATTAACA+TGG | - | 51749:10290-10309 | MS.gene027262:intergenic | 25.0% |
| ! | ATCTTATGGTTATTAAGGAA+CGG | + | 51749:12523-12542 | MS.gene027262:CDS | 25.0% |
| ! | ATTCCAAATTATGTAACATC+CGG | + | 51749:11538-11557 | MS.gene027262:intron | 25.0% |
| ! | CTTAGTTTACTTTCAATGTT+GGG | - | 51749:11646-11665 | MS.gene027262:intergenic | 25.0% |
| ! | GGTTGTTCATAATTTAACTA+CGG | - | 51749:11438-11457 | MS.gene027262:intergenic | 25.0% |
| ! | TCAACCTGGTTATAATTTAT+TGG | - | 51749:11703-11722 | MS.gene027262:intergenic | 25.0% |
| ! | TCTTAGTTTACTTTCAATGT+TGG | - | 51749:11647-11666 | MS.gene027262:intergenic | 25.0% |
| ! | TGTTTATTACTATCCATTTG+CGG | + | 51749:9913-9932 | MS.gene027262:CDS | 25.0% |
| ! | TTCCTTAATAACCATAAGAT+CGG | - | 51749:12523-12542 | MS.gene027262:intergenic | 25.0% |
| !! | AAGTGCAAAGCTTTTTAAAT+GGG | - | 51749:11726-11745 | MS.gene027262:intergenic | 25.0% |
| !! | ATCTTATCACTTCATGTTTT+TGG | + | 51749:12253-12272 | MS.gene027262:CDS | 25.0% |
| !! | TAAGTGCAAAGCTTTTTAAA+TGG | - | 51749:11727-11746 | MS.gene027262:intergenic | 25.0% |
| !!! | ATCGAATTATTTTAGTTACG+GGG | - | 51749:10501-10520 | MS.gene027262:intergenic | 25.0% |
| AACTTGTAATCAATTCGGTT+TGG | - | 51749:11838-11857 | MS.gene027262:intergenic | 30.0% | |
| AAGACGTGTTCAATACAATT+TGG | + | 51749:11372-11391 | MS.gene027262:intron | 30.0% | |
| ACTTGATCAAAATTGGCATA+GGG | + | 51749:11027-11046 | MS.gene027262:intron | 30.0% | |
| ATGAATTGGAACCATACAAT+GGG | + | 51749:11946-11965 | MS.gene027262:CDS | 30.0% | |
| ATTAAAAGCTGAAGTTACAG+AGG | + | 51749:12479-12498 | MS.gene027262:CDS | 30.0% | |
| CATGTCTAAGAACCTTAATA+GGG | - | 51749:9877-9896 | MS.gene027262:intergenic | 30.0% | |
| CTCCGTTTATATTCTTGTAT+GGG | - | 51749:12695-12714 | MS.gene027262:intergenic | 30.0% | |
| GATGTAACACTTGATCAATT+TGG | + | 51749:10016-10035 | MS.gene027262:CDS | 30.0% | |
| GGTGTTTATTTACAACTGTA+AGG | + | 51749:12544-12563 | MS.gene027262:CDS | 30.0% | |
| GTCCCATACAAGAATATAAA+CGG | + | 51749:12690-12709 | MS.gene027262:CDS | 30.0% | |
| GTTTATTACTATCCATTTGC+GGG | + | 51749:9914-9933 | MS.gene027262:CDS | 30.0% | |
| TCAACCAAAATCTTGAAACT+AGG | + | 51749:11399-11418 | MS.gene027262:intron | 30.0% | |
| TCATAAAATTGTTTGACGAG+AGG | + | 51749:11496-11515 | MS.gene027262:intron | 30.0% | |
| TCTCCGTTTATATTCTTGTA+TGG | - | 51749:12696-12715 | MS.gene027262:intergenic | 30.0% | |
| TCTTCTTCCTTAATGGTATT+TGG | - | 51749:12132-12151 | MS.gene027262:intergenic | 30.0% | |
| TGACGATAGATAAATATGAC+AGG | - | 51749:9830-9849 | MS.gene027262:intergenic | 30.0% | |
| TTTAATGGAGCATGGAAAAA+AGG | - | 51749:11750-11769 | MS.gene027262:intergenic | 30.0% | |
| TTTACTTTCAATGTTGGGAT+GGG | - | 51749:11641-11660 | MS.gene027262:intergenic | 30.0% | |
| ! | AGAGGGTTTTCCATTAAAAT+AGG | + | 51749:11267-11286 | MS.gene027262:intron | 30.0% |
| ! | ATCACCTAGTTTCAAGATTT+TGG | - | 51749:11406-11425 | MS.gene027262:intergenic | 30.0% |
| ! | ATGTTTTCTTTAATGGAGCA+TGG | - | 51749:11758-11777 | MS.gene027262:intergenic | 30.0% |
| ! | ATTAGGCTTAATAGCAGTTT+TGG | - | 51749:10863-10882 | MS.gene027262:intergenic | 30.0% |
| ! | CTCTAAAGAAGAAAGATTGA+TGG | - | 51749:12170-12189 | MS.gene027262:intergenic | 30.0% |
| ! | TTTTTCGCCAAATACCATTA+AGG | + | 51749:12122-12141 | MS.gene027262:CDS | 30.0% |
| !! | AGCATTGACTTAGTCAAAAT+TGG | - | 51749:10367-10386 | MS.gene027262:intergenic | 30.0% |
| !! | AGCATTGACTTGATCAAAAT+TGG | + | 51749:11020-11039 | MS.gene027262:intron | 30.0% |
| !! | TTTGAACACGCCTATTTTAA+TGG | - | 51749:11280-11299 | MS.gene027262:intergenic | 30.0% |
| !!! | GTACTCTGTCATTTTATGTT+AGG | - | 51749:11163-11182 | MS.gene027262:intergenic | 30.0% |
| !!! | TAGTTTTTTATCATTTGGGC+CGG | - | 51749:11560-11579 | MS.gene027262:intergenic | 30.0% |
| !!! | TTTTGGCTTAATAGCAGTTT+TGG | + | 51749:10444-10463 | MS.gene027262:intron | 30.0% |
| AAACCTCTTCATATCTTCAG+AGG | - | 51749:12748-12767 | MS.gene027262:intergenic | 35.0% | |
| AACCTCTTCATATCTTCAGA+GGG | - | 51749:12747-12766 | MS.gene027262:intergenic | 35.0% | |
| AAGGTAGACATCACAAAACT+AGG | - | 51749:12825-12844 | MS.gene027262:intergenic | 35.0% | |
| AGCAGTATCTTCTTCCTTAA+TGG | - | 51749:12139-12158 | MS.gene027262:intergenic | 35.0% | |
| ATCGCAACTTCTGTAAACAT+AGG | + | 51749:10834-10853 | MS.gene027262:intron | 35.0% | |
| ATCGCAACTTCTGTAAACAT+AGG | - | 51749:10853-10834 | MS.gene027262:intergenic | 35.0% | |
| ATCGCAACTTCTTGAAACAT+AGG | - | 51749:11136-11117 | MS.gene027262:intergenic | 35.0% | |
| ATGGGTTCATGAGCTTAATT+TGG | - | 51749:11623-11642 | MS.gene027262:intergenic | 35.0% | |
| ATTCTTGTATGGGACGATAT+AGG | - | 51749:12685-12704 | MS.gene027262:intergenic | 35.0% | |
| CATGAATTGGAACCATACAA+TGG | + | 51749:11945-11964 | MS.gene027262:CDS | 35.0% | |
| CATTGTATGGTTCCAATTCA+TGG | - | 51749:11947-11966 | MS.gene027262:intergenic | 35.0% | |
| CTTGATCAAAATTGGCATAG+GGG | + | 51749:11028-11047 | MS.gene027262:intron | 35.0% | |
| GAACATCATATAGGAGTTCT+TGG | - | 51749:10072-10091 | MS.gene027262:intergenic | 35.0% | |
| GACTTGATCAAAATTGGCAT+AGG | + | 51749:11026-11045 | MS.gene027262:intron | 35.0% | |
| GAGGTTTAACGCTAACAATT+CGG | + | 51749:12350-12369 | MS.gene027262:CDS | 35.0% | |
| GCAACTTCTTGAAACATAGA+AGG | + | 51749:11120-11139 | MS.gene027262:intron | 35.0% | |
| GCATGTCTAAGAACCTTAAT+AGG | - | 51749:9878-9897 | MS.gene027262:intergenic | 35.0% | |
| GCGTGTTCAAAGTTATCTAT+AGG | + | 51749:11289-11308 | MS.gene027262:intron | 35.0% | |
| GTTTACTTTCAATGTTGGGA+TGG | - | 51749:11642-11661 | MS.gene027262:intergenic | 35.0% | |
| TCGCAACTTCTGTAAACATA+GGG | + | 51749:10835-10854 | MS.gene027262:intron | 35.0% | |
| TGAAGTGATAAGATCGAATG+TGG | - | 51749:12247-12266 | MS.gene027262:intergenic | 35.0% | |
| TGTCATGTTTATTGAAGCTG+AGG | + | 51749:9991-10010 | MS.gene027262:CDS | 35.0% | |
| TTGATCAAAATTGGCATAGG+GGG | + | 51749:11029-11048 | MS.gene027262:intron | 35.0% | |
| ! | ACTTAGTCAAAATTGGCCTA+GGG | - | 51749:10360-10379 | MS.gene027262:intergenic | 35.0% |
| ! | AGTTTAACTTCATGAGGAGT+GGG | - | 51749:9764-9783 | MS.gene027262:intergenic | 35.0% |
| ! | CTTCGAAGTGAATTTTGGAT+GGG | + | 51749:12602-12621 | MS.gene027262:CDS | 35.0% |
| ! | GTTAGGCTTAATAGCAGTTT+TGG | - | 51749:11146-11165 | MS.gene027262:intergenic | 35.0% |
| ! | GTTTACAGAAGTTGCGATTT+TGG | + | 51749:10332-10351 | MS.gene027262:intron | 35.0% |
| ! | GTTTACAGAAGTTGCGATTT+TGG | - | 51749:10351-10332 | MS.gene027262:intergenic | 35.0% |
| ! | GTTTCAAGAAGTTGCGATTT+TGG | + | 51749:10475-10494 | MS.gene027262:intron | 35.0% |
| ! | GTTTCAAGAAGTTGCGATTT+TGG | - | 51749:10494-10475 | MS.gene027262:intergenic | 35.0% |
| ! | TCTGACATTGATGATCAAGA+AGG | + | 51749:9788-9807 | MS.gene027262:CDS | 35.0% |
| ! | TCTTCGAAGTGAATTTTGGA+TGG | + | 51749:12601-12620 | MS.gene027262:CDS | 35.0% |
| ! | TGACGAGAGGTTTACAATTT+TGG | + | 51749:11509-11528 | MS.gene027262:intron | 35.0% |
| ! | TTCGAAGTGAATTTTGGATG+GGG | + | 51749:12603-12622 | MS.gene027262:CDS | 35.0% |
| !! | AGCATTGACTTGGTCAAAAT+TGG | + | 51749:10738-10757 | MS.gene027262:intron | 35.0% |
| !! | AGCATTGACTTGGTCAAAAT+TGG | - | 51749:10757-10738 | MS.gene027262:intergenic | 35.0% |
| AAACCCATTTGGTTATGCAG+TGG | + | 51749:12443-12462 | MS.gene027262:CDS | 40.0% | |
| AAAGAGTTGGATGAGATGCT+TGG | + | 51749:12771-12790 | MS.gene027262:CDS | 40.0% | |
| AAATGGTTGCATGTAATGCG+TGG | - | 51749:12087-12106 | MS.gene027262:intergenic | 40.0% | |
| AACTCCACTGCATAACCAAA+TGG | - | 51749:12450-12469 | MS.gene027262:intergenic | 40.0% | |
| AATAAACATGACACCCTCAC+CGG | - | 51749:9984-10003 | MS.gene027262:intergenic | 40.0% | |
| ACTCCACTGCATAACCAAAT+GGG | - | 51749:12449-12468 | MS.gene027262:intergenic | 40.0% | |
| AGAGCTTCATCGTATCTTAG+TGG | + | 51749:11664-11683 | MS.gene027262:intron | 40.0% | |
| AGAGGAATACATGCATTCTG+TGG | + | 51749:12497-12516 | MS.gene027262:CDS | 40.0% | |
| ATAGGAGTTCTTGGAAGCAA+GGG | - | 51749:10063-10082 | MS.gene027262:intergenic | 40.0% | |
| ATTACTATCCATTTGCGGGA+AGG | + | 51749:9918-9937 | MS.gene027262:CDS | 40.0% | |
| CATCGTTAATGTTCACAGTG+CGG | + | 51749:9705-9724 | MS.gene027262:CDS | 40.0% | |
| CATTCAACCTGTGTGGAATA+GGG | + | 51749:12038-12057 | MS.gene027262:CDS | 40.0% | |
| CGCAACTTCTGTAAACATAG+GGG | + | 51749:10836-10855 | MS.gene027262:intron | 40.0% | |
| CTTGATCATCAATGTCAGAG+AGG | - | 51749:9787-9806 | MS.gene027262:intergenic | 40.0% | |
| GAAGAGGTTTGCAAAAGAGT+TGG | + | 51749:12758-12777 | MS.gene027262:CDS | 40.0% | |
| GAGACAATTCATGACTGCAT+GGG | + | 51749:11984-12003 | MS.gene027262:CDS | 40.0% | |
| GAGCTTCATCGTATCTTAGT+GGG | + | 51749:11665-11684 | MS.gene027262:intron | 40.0% | |
| GCAACTTCTGTAAACATAGG+CGG | - | 51749:10856-10837 | MS.gene027262:intergenic | 40.0% | |
| GCAACTTCTGTAAACATAGG+GGG | + | 51749:10837-10856 | MS.gene027262:intron | 40.0% | |
| GCAACTTCTTGAAACATAGG+AGG | - | 51749:10470-10489 | MS.gene027262:intergenic | 40.0% | |
| GGCCGATCTTATGGTTATTA+AGG | + | 51749:12518-12537 | MS.gene027262:CDS | 40.0% | |
| GTGGAATAGGGAGATTCTAA+TGG | + | 51749:12050-12069 | MS.gene027262:CDS | 40.0% | |
| TATAGGAGTTCTTGGAAGCA+AGG | - | 51749:10064-10083 | MS.gene027262:intergenic | 40.0% | |
| TCCAGCCTCAGAACAAATTA+TGG | + | 51749:10090-10109 | MS.gene027262:CDS | 40.0% | |
| TCTTCAGAGGGCAAACAAAT+TGG | - | 51749:12735-12754 | MS.gene027262:intergenic | 40.0% | |
| TGAGACAATTCATGACTGCA+TGG | + | 51749:11983-12002 | MS.gene027262:CDS | 40.0% | |
| ! | AAGCTTTGTGGAAACCCATT+TGG | + | 51749:12432-12451 | MS.gene027262:CDS | 40.0% |
| ! | ACTTGGTCAAAATTGGCCTA+AGG | - | 51749:10764-10745 | MS.gene027262:intergenic | 40.0% |
| ! | ACTTGGTCAAAATTGGCCTA+GGG | + | 51749:10745-10764 | MS.gene027262:intron | 40.0% |
| ! | AGGCTCTTCGAAGTGAATTT+TGG | + | 51749:12597-12616 | MS.gene027262:CDS | 40.0% |
| ! | CTTAGTCAAAATTGGCCTAG+GGG | - | 51749:10359-10378 | MS.gene027262:intergenic | 40.0% |
| ! | CTTGGTCAAAATTGGCCTAA+GGG | - | 51749:10562-10581 | MS.gene027262:intergenic | 40.0% |
| ! | GACTTAGTCAAAATTGGCCT+AGG | - | 51749:10361-10380 | MS.gene027262:intergenic | 40.0% |
| ! | GAGAGGAGTTTAACTTCATG+AGG | - | 51749:9770-9789 | MS.gene027262:intergenic | 40.0% |
| ! | GAGTTTAACTTCATGAGGAG+TGG | - | 51749:9765-9784 | MS.gene027262:intergenic | 40.0% |
| ! | GCTTTTTAAATGGGTCAACC+TGG | - | 51749:11717-11736 | MS.gene027262:intergenic | 40.0% |
| ! | TAACTGTTTTGCTTACCCAG+CGG | + | 51749:12392-12411 | MS.gene027262:CDS | 40.0% |
| ! | TCGGCACTTGTTGGATATTA+CGG | + | 51749:12369-12388 | MS.gene027262:CDS | 40.0% |
| ! | TTAGTCAAAATTGGCCTAGG+GGG | - | 51749:10358-10377 | MS.gene027262:intergenic | 40.0% |
| ! | TTGGTCAAAATTGGCCTAAG+GGG | - | 51749:10561-10580 | MS.gene027262:intergenic | 40.0% |
| ! | TTTCAGATTTGACTCGTGCT+AGG | + | 51749:12577-12596 | MS.gene027262:CDS | 40.0% |
| !! | AAGTTGATGGTGGATTGTAC+CGG | + | 51749:9962-9981 | MS.gene027262:CDS | 40.0% |
| !! | ACGGTCCATAATTTGTTCTG+AGG | - | 51749:10098-10117 | MS.gene027262:intergenic | 40.0% |
| !! | ACTCAAGTGTTGAGTTTGTG+TGG | - | 51749:11475-11494 | MS.gene027262:intergenic | 40.0% |
| !! | ATCACAAAACTAGGAGCACT+CGG | - | 51749:12816-12835 | MS.gene027262:intergenic | 40.0% |
| !! | TCCATAATTTGTTCTGAGGC+TGG | - | 51749:10094-10113 | MS.gene027262:intergenic | 40.0% |
| !!! | CACTCGGTGTAAGATGATTT+TGG | - | 51749:12800-12819 | MS.gene027262:intergenic | 40.0% |
| AGAATCTCCCTATTCCACAC+AGG | - | 51749:12048-12067 | MS.gene027262:intergenic | 45.0% | |
| AGTTCTTGGAAGCAAGGGAA+TGG | - | 51749:10058-10077 | MS.gene027262:intergenic | 45.0% | |
| ATCCATTTGCGGGAAGGATT+AGG | + | 51749:9924-9943 | MS.gene027262:CDS | 45.0% | |
| CAAAGGGGGCAAAACATAGA+GGG | - | 51749:10529-10548 | MS.gene027262:intergenic | 45.0% | |
| CCATTCAACCTGTGTGGAAT+AGG | + | 51749:12037-12056 | MS.gene027262:CDS | 45.0% | |
| CTATCGTCACGAACCATCAA+TGG | + | 51749:9841-9860 | MS.gene027262:CDS | 45.0% | |
| CTGAGGCTGGAACATCATAT+AGG | - | 51749:10081-10100 | MS.gene027262:intergenic | 45.0% | |
| GCAGTTAGAGGCAAATGAAG+AGG | + | 51749:12296-12315 | MS.gene027262:CDS | 45.0% | |
| GCTAACAATTCGGCACTTGT+TGG | + | 51749:12360-12379 | MS.gene027262:CDS | 45.0% | |
| GGCAGAGAAAGACCCTATTA+AGG | + | 51749:9862-9881 | MS.gene027262:CDS | 45.0% | |
| GGGCCGGATGTTACATAATT+TGG | - | 51749:11544-11563 | MS.gene027262:intergenic | 45.0% | |
| GGTTCATAGTGGCCATGAAT+TGG | + | 51749:11932-11951 | MS.gene027262:CDS | 45.0% | |
| TCCATTTGCGGGAAGGATTA+GGG | + | 51749:9925-9944 | MS.gene027262:CDS | 45.0% | |
| TGACTAAGTCAATGCTGACG+TGG | + | 51749:10371-10390 | MS.gene027262:intron | 45.0% | |
| TGATCAAGTCAATGCTGACG+TGG | - | 51749:11016-11035 | MS.gene027262:intergenic | 45.0% | |
| TGCAAAGGGGGCAAAACATA+GGG | + | 51749:10776-10795 | MS.gene027262:intron | 45.0% | |
| TGGACCTGTATGAGTCGAAT+GGG | - | 51749:10121-10140 | MS.gene027262:intergenic | 45.0% | |
| TGTGTGGAGTCAGACAAATG+AGG | - | 51749:11459-11478 | MS.gene027262:intergenic | 45.0% | |
| TTGGACCTGTATGAGTCGAA+TGG | - | 51749:10122-10141 | MS.gene027262:intergenic | 45.0% | |
| ! | ATGGTGGAGTTGCAAAAGGT+GGG | + | 51749:12637-12656 | MS.gene027262:CDS | 45.0% |
| ! | CCTATTCCACACAGGTTGAA+TGG | - | 51749:12040-12059 | MS.gene027262:intergenic | 45.0% |
| ! | CTTGGTCAAAATTGGCCTAG+GGG | + | 51749:10746-10765 | MS.gene027262:intron | 45.0% |
| ! | GACTTGGTCAAAATTGGCCT+AGG | + | 51749:10744-10763 | MS.gene027262:intron | 45.0% |
| ! | GTGAATTTTGGATGGGGTGA+AGG | + | 51749:12609-12628 | MS.gene027262:CDS | 45.0% |
| ! | GTGCATTGACGAAGGTGAAA+TGG | - | 51749:12225-12244 | MS.gene027262:intergenic | 45.0% |
| ! | GTGTATGGTGGAGTTGCAAA+AGG | + | 51749:12633-12652 | MS.gene027262:CDS | 45.0% |
| ! | TAAGGGGCCAAAAGTGCAAA+GGG | - | 51749:10545-10564 | MS.gene027262:intergenic | 45.0% |
| ! | TATGGTGGAGTTGCAAAAGG+TGG | + | 51749:12636-12655 | MS.gene027262:CDS | 45.0% |
| ! | TGCCCTCTGAAGATATGAAG+AGG | + | 51749:12742-12761 | MS.gene027262:CDS | 45.0% |
| ! | TTCCACACAGGTTGAATGGA+AGG | - | 51749:12036-12055 | MS.gene027262:intergenic | 45.0% |
| ! | TTTTGCCCCCTTTGCACTTT+TGG | + | 51749:10535-10554 | MS.gene027262:intron | 45.0% |
| ! | TTTTGCCCCCTTTGCACTTT+TGG | - | 51749:10554-10535 | MS.gene027262:intergenic | 45.0% |
| !! | CTCAAAAGCACTGCAGTTAG+AGG | + | 51749:12284-12303 | MS.gene027262:CDS | 45.0% |
| !! | ATATATATATATATATTAGA+GGG | + | 51749:11250-11269 | MS.gene027262:intron | 5.0% |
| !! | TATATATATATATATATTAG+AGG | + | 51749:11249-11268 | MS.gene027262:intron | 5.0% |
| AACTTCATGAGGAGTGGGTG+CGG | - | 51749:9759-9778 | MS.gene027262:intergenic | 50.0% | |
| ATTTGCGGGAAGGATTAGGG+AGG | + | 51749:9928-9947 | MS.gene027262:CDS | 50.0% | |
| CAAAGGGGGCAAAACATAGG+GGG | + | 51749:10778-10797 | MS.gene027262:intron | 50.0% | |
| CAGCTGCATCACCCATTGTA+TGG | - | 51749:11960-11979 | MS.gene027262:intergenic | 50.0% | |
| CATACAATGGGTGATGCAGC+TGG | + | 51749:11958-11977 | MS.gene027262:CDS | 50.0% | |
| CATGACTGCATGGGCAGAAA+TGG | + | 51749:11993-12012 | MS.gene027262:CDS | 50.0% | |
| CCTGTATGAGTCGAATGGGA+CGG | - | 51749:10117-10136 | MS.gene027262:intergenic | 50.0% | |
| CGTTAATGTTCACAGTGCGG+AGG | + | 51749:9708-9727 | MS.gene027262:CDS | 50.0% | |
| GCAAAGGGGGCAAAACATAG+AGG | - | 51749:10796-10777 | MS.gene027262:intergenic | 50.0% | |
| GCAAAGGGGGCAAAACATAG+GGG | + | 51749:10777-10796 | MS.gene027262:intron | 50.0% | |
| GCATCCAACTCAAAGTCGAG+AGG | + | 51749:11595-11614 | MS.gene027262:intron | 50.0% | |
| GCATTCTGTGGCCGATCTTA+TGG | + | 51749:12509-12528 | MS.gene027262:CDS | 50.0% | |
| GGGACGATATAGGTTACTCC+AGG | - | 51749:12675-12694 | MS.gene027262:intergenic | 50.0% | |
| GGGTCTTTCTCTGCCATTGA+TGG | - | 51749:9857-9876 | MS.gene027262:intergenic | 50.0% | |
| GGTTGCATGTAATGCGTGGA+GGG | - | 51749:12083-12102 | MS.gene027262:intergenic | 50.0% | |
| GTCCTTCCATTCAACCTGTG+TGG | + | 51749:12031-12050 | MS.gene027262:CDS | 50.0% | |
| GTGCAAAGGGGGCAAAACAT+AGG | + | 51749:10775-10794 | MS.gene027262:intron | 50.0% | |
| GTTAAACCTCGAGCGTGCAT+TGG | - | 51749:12340-12359 | MS.gene027262:intergenic | 50.0% | |
| TCACACGTCTCAAGTGTGGT+GGG | + | 51749:11911-11930 | MS.gene027262:CDS | 50.0% | |
| TCCCTAATCCTTCCCGCAAA+TGG | - | 51749:9929-9948 | MS.gene027262:intergenic | 50.0% | |
| TCTTGGAAGCAAGGGAATGG+AGG | - | 51749:10055-10074 | MS.gene027262:intergenic | 50.0% | |
| TGACCAAGTCAATGCTGACG+TGG | + | 51749:10574-10593 | MS.gene027262:intron | 50.0% | |
| TGACCAAGTCAATGCTGACG+TGG | - | 51749:10593-10574 | MS.gene027262:intergenic | 50.0% | |
| TGGTGGAGTTGCAAAAGGTG+GGG | + | 51749:12638-12657 | MS.gene027262:CDS | 50.0% | |
| TGGTTGCATGTAATGCGTGG+AGG | - | 51749:12084-12103 | MS.gene027262:intergenic | 50.0% | |
| TTTGCGGGAAGGATTAGGGA+GGG | + | 51749:9929-9948 | MS.gene027262:CDS | 50.0% | |
| ! | AAGGGGCCAAAAGTGCAAAG+GGG | - | 51749:10544-10563 | MS.gene027262:intergenic | 50.0% |
| ! | ATAGGGGGCCAAAAGTGCAA+AGG | + | 51749:11044-11063 | MS.gene027262:intron | 50.0% |
| ! | CGAATGTGGTGCATTGACGA+AGG | - | 51749:12233-12252 | MS.gene027262:intergenic | 50.0% |
| ! | CTAAGGGGCCAAAAGTGCAA+AGG | - | 51749:10546-10565 | MS.gene027262:intergenic | 50.0% |
| ! | CTAGGGGCCAAAAGTGCAAA+GGG | + | 51749:10762-10781 | MS.gene027262:intron | 50.0% |
| ! | CTTTGCACTTTTGGCCCCTT+AGG | + | 51749:10544-10563 | MS.gene027262:intron | 50.0% |
| ! | TAGGGGCCAAAAGTGCAAAG+GGG | + | 51749:10763-10782 | MS.gene027262:intron | 50.0% |
| ! | TAGGGGGCCAAAAGTGCAAA+GGG | + | 51749:11045-11064 | MS.gene027262:intron | 50.0% |
| !! | ATGGTGGATTGTACCGGTGA+GGG | + | 51749:9968-9987 | MS.gene027262:CDS | 50.0% |
| !! | CAAGTGTGGTGGGTTCATAG+TGG | + | 51749:11921-11940 | MS.gene027262:CDS | 50.0% |
| AAGCTTCCCTGCAGTGGTGA+CGG | - | 51749:12418-12437 | MS.gene027262:intergenic | 55.0% | |
| ACCACTGCAGGGAAGCTTTG+TGG | + | 51749:12420-12439 | MS.gene027262:CDS | 55.0% | |
| CAGGTCACACGTCTCAAGTG+TGG | + | 51749:11907-11926 | MS.gene027262:intron | 55.0% | |
| CATAGCCACGCTTCGTCTCT+TGG | + | 51749:12197-12216 | MS.gene027262:CDS | 55.0% | |
| CCGTCCCATTCGACTCATAC+AGG | + | 51749:10114-10133 | MS.gene027262:CDS | 55.0% | |
| GAAGGATTAGGGAGGGAGCT+AGG | + | 51749:9936-9955 | MS.gene027262:CDS | 55.0% | |
| GGAGCCTCTCGACTTTGAGT+TGG | - | 51749:11602-11621 | MS.gene027262:intergenic | 55.0% | |
| GTCACACGTCTCAAGTGTGG+TGG | + | 51749:11910-11929 | MS.gene027262:CDS | 55.0% | |
| TCCACAAAGCTTCCCTGCAG+TGG | - | 51749:12424-12443 | MS.gene027262:intergenic | 55.0% | |
| TGGAACCAAGAGACGAAGCG+TGG | - | 51749:12205-12224 | MS.gene027262:intergenic | 55.0% | |
| ! | AGGGGCCAAAAGTGCAAAGG+GGG | + | 51749:10764-10783 | MS.gene027262:intron | 55.0% |
| ! | AGGGGCCAAAAGTGCAAAGG+GGG | - | 51749:10783-10764 | MS.gene027262:intergenic | 55.0% |
| ! | AGGGGGCCAAAAGTGCAAAG+GGG | + | 51749:11046-11065 | MS.gene027262:intron | 55.0% |
| ! | CCTAGGGGCCAAAAGTGCAA+AGG | + | 51749:10761-10780 | MS.gene027262:intron | 55.0% |
| ! | CCTTTGCACTTTTGGCCCCT+AGG | - | 51749:10562-10543 | MS.gene027262:intergenic | 55.0% |
| !! | ACGCCACGTCAGCATTGACT+TGG | - | 51749:11029-11010 | MS.gene027262:intergenic | 55.0% |
| !! | AGCTAGGCGCAAGTTGATGG+TGG | + | 51749:9952-9971 | MS.gene027262:CDS | 55.0% |
| !! | AGTTGCGATTTTGGCCCCCT+AGG | + | 51749:10341-10360 | MS.gene027262:intron | 55.0% |
| !! | CTGGAAGCACCAACTCTGGT+TGG | - | 51749:9736-9755 | MS.gene027262:intergenic | 55.0% |
| !! | GATGGTGGATTGTACCGGTG+AGG | + | 51749:9967-9986 | MS.gene027262:CDS | 55.0% |
| GCATGGGCAGAAATGGCTCG+AGG | + | 51749:12000-12019 | MS.gene027262:CDS | 60.0% | |
| GGAGTTGCAAAAGGTGGGGC+TGG | + | 51749:12642-12661 | MS.gene027262:CDS | 60.0% | |
| ! | GGATGGGGTGAAGGCGTGTA+TGG | + | 51749:12618-12637 | MS.gene027262:CDS | 60.0% |
| ! | GGGAGCTAGGCGCAAGTTGA+TGG | + | 51749:9949-9968 | MS.gene027262:CDS | 60.0% |
| ! | GGGGGCCAAAAGTGCAAAGG+GGG | + | 51749:11047-11066 | MS.gene027262:intron | 60.0% |
| ! | GGTGGGGCTGGAACTTTTCC+TGG | + | 51749:12654-12673 | MS.gene027262:CDS | 60.0% |
| ! | TGGGGTGAAGGCGTGTATGG+TGG | + | 51749:12621-12640 | MS.gene027262:CDS | 60.0% |
| !! | GCGCCACGTCAGCATTGACT+TGG | + | 51749:10728-10747 | MS.gene027262:intron | 60.0% |
| GCATCGCCAATGCACGCTCG+AGG | + | 51749:12331-12350 | MS.gene027262:CDS | 65.0% | |
| GTCAATGCTGACGTGGCGCC+AGG | - | 51749:10727-10746 | MS.gene027262:intergenic | 65.0% | |
| TCATGAGGAGTGGGTGCGGC+TGG | - | 51749:9755-9774 | MS.gene027262:intergenic | 65.0% | |
| !! | GCGGAGGTGCCAACCAGAGT+TGG | + | 51749:9724-9743 | MS.gene027262:CDS | 65.0% |
| !! | GCGGCTGGAAGCACCAACTC+TGG | - | 51749:9740-9759 | MS.gene027262:intergenic | 65.0% |
| CAGCGGCCGTCACCACTGCA+GGG | + | 51749:12409-12428 | MS.gene027262:CDS | 70.0% | |
| !! | CTGCAGTGGTGACGGCCGCT+GGG | - | 51749:12410-12429 | MS.gene027262:intergenic | 70.0% |
| CCAGCGGCCGTCACCACTGC+AGG | + | 51749:12408-12427 | MS.gene027262:CDS | 75.0% | |
| !! | CCTGCAGTGGTGACGGCCGC+TGG | - | 51749:12411-12430 | MS.gene027262:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| 51749 | gene | 9695 | 12848 | 9695 | ID=MS.gene027262 |
| 51749 | mRNA | 9695 | 12848 | 9695 | ID=MS.gene027262.t1;Parent=MS.gene027262 |
| 51749 | exon | 9695 | 10135 | 9695 | ID=MS.gene027262.t1.exon1;Parent=MS.gene027262.t1 |
| 51749 | CDS | 9695 | 10135 | 9695 | ID=cds.MS.gene027262.t1;Parent=MS.gene027262.t1 |
| 51749 | exon | 11910 | 12848 | 11910 | ID=MS.gene027262.t1.exon2;Parent=MS.gene027262.t1 |
| 51749 | CDS | 11910 | 12848 | 11910 | ID=cds.MS.gene027262.t1;Parent=MS.gene027262.t1 |
| Gene Sequence |
| Protein sequence |
