AlfalfaGEDB | MS.gene030652

M. sativa cultivar XinJiangDaYe / MS.gene030652

KEGG: K19040
GO: -
PFAM: PF13639.9

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene030652.t1	XP_003630209.2	90.5	231	22	0	1	231	1	231	4.80E-103	384

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene030652.t1	Q6NML0	45.5	213	97	5	21	226	23	223	8.2e-43	175.3

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene030652.t1	G7LD46	90.5	231	22	0	1	231	1	231	3.5e-103	384.0

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR

PPI:

Gene1	Gene2	Type
MS.gene58109	MS.gene030652	PPI
MS.gene013346	MS.gene030652	PPI
MS.gene030656	MS.gene030652	PPI
MS.gene030652	MS.gene94889	PPI
MS.gene28424	MS.gene030652	PPI
MS.gene70256	MS.gene030652	PPI
MS.gene030652	MS.gene88015	PPI
MS.gene030652	MS.gene70250	PPI
MS.gene030652	MS.gene030651	PPI
MS.gene58111	MS.gene030652	PPI
MS.gene58106	MS.gene030652	PPI
MS.gene70253	MS.gene030652	PPI
MS.gene28427	MS.gene030652	PPI
MS.gene48772	MS.gene030652	PPI
MS.gene030652	MS.gene28430	PPI
MS.gene049319	MS.gene030652	PPI
MS.gene28426	MS.gene030652	PPI
MS.gene030652	MS.gene31002	PPI
MS.gene06444	MS.gene030652	PPI
MS.gene58108	MS.gene030652	PPI
MS.gene28428	MS.gene030652	PPI
MS.gene28429	MS.gene030652	PPI
MS.gene030652	MS.gene70254	PPI
MS.gene70249	MS.gene030652	PPI
MS.gene030652	MS.gene030660	PPI
MS.gene030659	MS.gene030652	PPI
MS.gene58105	MS.gene030652	PPI
MS.gene58104	MS.gene030652	PPI
MS.gene030652	MS.gene28427	PPI
MS.gene030655	MS.gene030652	PPI
MS.gene030652	MS.gene70255	PPI
MS.gene030652	MS.gene030653	PPI
MS.gene030652	MS.gene58110	PPI
MS.gene030652	MS.gene28431	PPI
MS.gene030654	MS.gene030652	PPI
MS.gene030652	MS.gene58104	PPI
MS.gene58107	MS.gene030652	PPI
MS.gene28425	MS.gene030652	PPI
MS.gene030652	MS.gene70257	PPI
MS.gene030658	MS.gene030652	PPI
MS.gene76770	MS.gene030652	PPI
MS.gene030651	MS.gene030652	PPI
MS.gene030652	MS.gene030657	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene030652.t1	MTR_8g092990	91.342	231	20	0	1	231	1	231	2.75e-136	382
MS.gene030652.t1	MTR_8g092840	81.416	226	41	1	1	226	1	225	1.65e-123	350
MS.gene030652.t1	MTR_8g092970	82.379	227	30	2	1	227	1	217	4.03e-123	348
MS.gene030652.t1	MTR_8g093010	79.476	229	35	5	1	227	1	219	6.49e-123	348
MS.gene030652.t1	MTR_8g092930	80.617	227	42	2	1	227	1	225	1.25e-119	340
MS.gene030652.t1	MTR_8g092985	82.160	213	35	1	1	213	1	210	4.46e-119	338
MS.gene030652.t1	MTR_8g092960	77.434	226	40	2	1	226	1	215	1.11e-116	332
MS.gene030652.t1	MTR_3g095560	62.447	237	75	4	1	230	1	230	8.73e-96	280
MS.gene030652.t1	MTR_3g094000	50.000	146	67	2	54	198	36	176	1.33e-41	140
MS.gene030652.t1	MTR_7g073200	49.315	146	58	4	47	187	19	153	2.49e-39	134
MS.gene030652.t1	MTR_5g024730	44.444	162	73	6	55	208	26	178	2.11e-35	125
MS.gene030652.t1	MTR_3g116000	48.201	139	65	4	59	195	26	159	3.33e-34	121
MS.gene030652.t1	MTR_8g073120	44.056	143	68	4	55	194	19	152	8.37e-32	115
MS.gene030652.t1	MTR_4g094725	43.200	125	65	2	61	184	30	149	1.20e-28	105
MS.gene030652.t1	MTR_2g035800	38.760	129	73	2	56	184	23	145	1.40e-27	103
MS.gene030652.t1	MTR_3g071300	34.146	164	88	4	57	213	22	172	2.09e-22	90.5
MS.gene030652.t1	MTR_1g043410	28.659	164	104	4	62	216	35	194	2.84e-20	87.8
MS.gene030652.t1	MTR_7g113800	33.775	151	78	5	46	187	29	166	1.43e-19	86.3
MS.gene030652.t1	MTR_8g023400	45.570	79	40	2	114	191	92	168	4.82e-19	84.3
MS.gene030652.t1	MTR_4g120270	43.836	73	38	1	111	183	77	146	1.37e-18	82.4
MS.gene030652.t1	MTR_5g082940	47.368	76	39	1	112	186	73	148	1.92e-18	79.7
MS.gene030652.t1	MTR_1g082550	31.613	155	83	5	43	187	32	173	2.16e-18	83.2
MS.gene030652.t1	MTR_7g117540	31.111	135	91	1	55	189	17	149	2.20e-18	82.0
MS.gene030652.t1	MTR_3g110190	33.333	132	78	4	62	189	15	140	2.62e-18	82.8
MS.gene030652.t1	MTR_6g087150	33.577	137	90	1	48	184	27	162	5.82e-18	82.0
MS.gene030652.t1	MTR_1g100737	45.783	83	41	2	112	190	90	172	1.10e-17	78.6
MS.gene030652.t1	MTR_2g436100	31.210	157	86	5	42	183	12	161	1.69e-17	79.7
MS.gene030652.t1	MTR_3g078450	35.652	115	71	2	89	202	51	163	2.37e-17	78.2
MS.gene030652.t1	MTR_6g055030	36.975	119	66	3	67	183	57	168	3.73e-17	79.0
MS.gene030652.t1	MTR_1g492830	39.474	76	46	0	113	188	60	135	3.93e-17	77.4
MS.gene030652.t1	MTR_2g096350	60.417	48	19	0	136	183	130	177	4.66e-17	77.4
MS.gene030652.t1	MTR_5g064990	30.000	150	100	4	53	199	55	202	4.68e-17	79.3
MS.gene030652.t1	MTR_7g116220	40.000	80	46	1	111	188	67	146	4.99e-17	76.3
MS.gene030652.t1	MTR_3g114500	33.871	124	67	5	64	183	1	113	5.02e-17	75.1
MS.gene030652.t1	MTR_5g064980	31.746	126	81	2	63	186	60	182	6.77e-17	79.0
MS.gene030652.t1	MTR_3g464780	43.590	78	41	1	113	187	101	178	1.03e-16	77.0
MS.gene030652.t1	MTR_7g076250	36.283	113	62	3	112	223	61	164	1.25e-16	75.5
MS.gene030652.t1	MTR_2g055790	35.772	123	68	3	66	187	34	146	1.40e-16	75.5
MS.gene030652.t1	MTR_3g099650	30.597	134	85	3	57	187	54	182	1.54e-16	77.8
MS.gene030652.t1	MTR_4g056590	39.326	89	47	3	111	199	97	178	1.74e-16	75.1
MS.gene030652.t1	MTR_4g063070	42.105	76	43	1	109	183	303	378	2.32e-16	77.4
MS.gene030652.t1	MTR_4g030070	36.364	88	54	1	104	191	75	160	2.87e-16	75.1
MS.gene030652.t1	MTR_8g066780	26.425	193	120	3	59	229	48	240	3.36e-16	76.6
MS.gene030652.t1	MTR_4g129420	41.772	79	46	0	109	187	112	190	5.21e-16	76.6
MS.gene030652.t1	MTR_5g071930	40.426	94	50	2	113	206	65	152	7.51e-16	73.6
MS.gene030652.t1	MTR_5g030010	36.275	102	62	2	107	208	115	213	8.32e-16	75.9
MS.gene030652.t1	MTR_8g089880	37.500	80	49	1	114	193	127	205	1.11e-15	74.3
MS.gene030652.t1	MTR_5g076990	35.433	127	76	3	62	183	23	148	1.21e-15	74.7
MS.gene030652.t1	MTR_4g108830	34.694	98	62	1	87	184	122	217	1.76e-15	73.2
MS.gene030652.t1	MTR_7g116180	40.000	75	43	1	114	186	67	141	1.88e-15	72.0
MS.gene030652.t1	MTR_1g026070	30.000	120	77	3	64	183	1	113	2.36e-15	70.5
MS.gene030652.t1	MTR_3g078470	37.113	97	59	2	91	186	54	149	2.41e-15	72.8
MS.gene030652.t1	MTR_1g070425	40.000	75	43	1	114	186	68	142	2.59e-15	71.6
MS.gene030652.t1	MTR_5g066250	41.667	72	41	1	112	183	132	202	3.09e-15	74.3
MS.gene030652.t1	MTR_6g007737	32.117	137	78	4	62	186	71	204	4.40e-15	73.9
MS.gene030652.t1	MTR_3g100400	41.667	72	41	1	112	183	128	198	4.72e-15	73.9
MS.gene030652.t1	MTR_4g093830	32.407	108	62	2	114	221	126	222	5.76e-15	73.2
MS.gene030652.t1	MTR_7g108855	36.957	92	49	2	115	197	67	158	5.96e-15	71.2
MS.gene030652.t1	MTR_5g064890	31.034	116	77	2	74	187	86	200	7.76e-15	72.8
MS.gene030652.t1	MTR_2g009310	60.000	45	18	0	139	183	159	203	8.21e-15	73.2
MS.gene030652.t1	MTR_1g070140	38.158	76	47	0	108	183	97	172	8.22e-15	72.8
MS.gene030652.t1	MTR_4g108830	34.375	96	61	1	89	184	96	189	9.66e-15	70.5
MS.gene030652.t1	MTR_5g026720	28.467	137	84	4	54	183	6	135	1.10e-14	69.7
MS.gene030652.t1	MTR_3g012550	28.030	132	92	3	53	183	21	150	1.20e-14	69.7
MS.gene030652.t1	MTR_1g074190	32.231	121	72	3	81	191	61	181	1.68e-14	72.0
MS.gene030652.t1	MTR_6g007680	43.662	71	39	1	113	183	39	108	2.06e-14	68.6
MS.gene030652.t1	MTR_8g074900	41.333	75	39	1	112	186	156	225	2.35e-14	70.1
MS.gene030652.t1	MTR_5g026730	27.612	134	79	4	59	183	12	136	2.42e-14	68.9
MS.gene030652.t1	MTR_2g090905	44.286	70	27	1	140	209	70	127	2.74e-14	67.8
MS.gene030652.t1	MTR_5g034790	40.260	77	45	1	110	186	112	187	3.43e-14	71.2
MS.gene030652.t1	MTR_3g086700	36.458	96	55	2	94	183	22	117	3.46e-14	68.9
MS.gene030652.t1	MTR_5g092790	41.667	72	41	1	113	183	156	227	4.10e-14	69.7
MS.gene030652.t1	MTR_8g028465	32.692	104	53	3	114	217	90	176	4.86e-14	68.9
MS.gene030652.t1	MTR_7g079280	31.858	113	62	3	114	225	80	178	4.93e-14	68.2
MS.gene030652.t1	MTR_3g091620	33.636	110	60	3	111	208	98	206	4.96e-14	70.5
MS.gene030652.t1	MTR_8g063660	31.159	138	83	3	62	188	5	141	6.26e-14	70.1
MS.gene030652.t1	MTR_1g056350	33.684	95	59	2	110	201	70	163	6.72e-14	67.8
MS.gene030652.t1	MTR_8g099495	38.961	77	46	1	108	183	313	389	6.77e-14	70.5
MS.gene030652.t1	MTR_5g022920	39.474	76	45	1	112	186	159	234	6.94e-14	68.9
MS.gene030652.t1	MTR_3g086730	38.750	80	47	1	109	186	41	120	9.99e-14	68.6
MS.gene030652.t1	MTR_5g009190	38.272	81	49	1	104	183	256	336	1.09e-13	69.7
MS.gene030652.t1	MTR_6g007670	40.260	77	41	2	110	183	1	75	1.11e-13	68.6
MS.gene030652.t1	MTR_6g007670	45.070	71	39	0	113	183	144	214	2.91e-13	67.4
MS.gene030652.t1	MTR_2g090950	39.744	78	42	1	111	183	88	165	1.12e-13	68.6
MS.gene030652.t1	MTR_2g041200	46.774	62	33	0	122	183	90	151	1.29e-13	67.0
MS.gene030652.t1	MTR_8g032690	43.077	65	34	1	141	205	19	80	1.48e-13	65.1
MS.gene030652.t1	MTR_5g009210	38.750	80	48	1	105	183	278	357	1.89e-13	68.9
MS.gene030652.t1	MTR_3g091200	39.437	71	42	1	114	183	303	373	1.96e-13	68.9
MS.gene030652.t1	MTR_3g087900	48.529	68	30	3	121	187	52	115	2.44e-13	65.9
MS.gene030652.t1	MTR_7g059360	47.368	57	30	0	128	184	145	201	2.58e-13	67.4
MS.gene030652.t1	MTR_7g079290	32.941	85	52	2	113	193	124	207	2.68e-13	67.0
MS.gene030652.t1	MTR_5g092750	43.056	72	40	1	113	183	156	227	4.03e-13	67.0
MS.gene030652.t1	MTR_4g106680	37.333	75	46	1	109	183	101	174	4.56e-13	67.4
MS.gene030652.t1	MTR_5g009200	40.845	71	41	1	114	183	322	392	6.87e-13	67.4
MS.gene030652.t1	MTR_8g099515	42.254	71	40	1	114	183	309	379	1.07e-12	67.0
MS.gene030652.t1	MTR_8g019710	60.000	45	18	0	139	183	52	96	1.29e-12	63.5
MS.gene030652.t1	MTR_7g096690	26.471	136	79	5	62	183	14	142	1.71e-12	65.9
MS.gene030652.t1	MTR_2g079320	34.862	109	66	2	83	186	96	204	1.72e-12	64.7
MS.gene030652.t1	MTR_3g078120	28.889	135	71	3	62	183	5	127	1.80e-12	63.5
MS.gene030652.t1	MTR_8g071815	53.488	43	20	0	141	183	90	132	3.95e-12	63.2
MS.gene030652.t1	MTR_7g116200	32.090	134	69	5	65	183	9	135	4.84e-12	62.8
MS.gene030652.t1	MTR_4g022410	29.688	128	63	2	62	183	49	155	6.30e-12	62.8
MS.gene030652.t1	MTR_8g066740	31.496	127	81	3	62	183	23	148	6.54e-12	64.3
MS.gene030652.t1	MTR_4g116460	53.333	45	19	2	140	183	440	483	1.43e-11	63.9
MS.gene030652.t1	MTR_4g116460	53.333	45	19	2	140	183	483	526	1.48e-11	63.9
MS.gene030652.t1	MTR_3g081030	34.343	99	55	2	120	218	100	188	2.47e-11	61.6
MS.gene030652.t1	MTR_4g106960	54.000	50	22	1	134	183	171	219	3.93e-11	62.0
MS.gene030652.t1	MTR_6g055030	53.659	41	19	0	143	183	97	137	4.37e-11	61.6
MS.gene030652.t1	MTR_4g106960	54.000	50	22	1	134	183	171	219	4.43e-11	62.0
MS.gene030652.t1	MTR_4g106960	54.000	50	22	1	134	183	228	276	4.51e-11	62.0
MS.gene030652.t1	MTR_4g106960	54.000	50	22	1	134	183	228	276	5.03e-11	62.0
MS.gene030652.t1	MTR_8g027980	33.333	75	48	1	117	189	93	167	5.56e-11	61.2
MS.gene030652.t1	MTR_8g027745	34.615	78	50	1	107	183	279	356	5.84e-11	61.6
MS.gene030652.t1	MTR_3g078540	41.270	63	36	1	128	189	66	128	6.95e-11	58.9

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene030652.t1	AT1G49230	49.550	222	86	4	11	225	17	219	3.89e-66	204
MS.gene030652.t1	AT1G49210	46.890	209	100	4	21	226	23	223	2.52e-57	182
MS.gene030652.t1	AT1G49220	47.739	199	93	5	21	216	23	213	1.24e-56	181
MS.gene030652.t1	AT1G49200	45.933	209	102	5	21	226	24	224	3.26e-56	179
MS.gene030652.t1	AT3G18773	50.292	171	79	3	60	226	50	218	1.17e-52	169
MS.gene030652.t1	AT5G05280	51.429	140	61	2	58	197	37	169	3.13e-42	141
MS.gene030652.t1	AT3G10910	52.632	133	59	3	58	187	29	160	2.71e-40	137
MS.gene030652.t1	AT1G76410	44.056	143	77	2	47	189	13	152	4.42e-36	126
MS.gene030652.t1	AT1G20823	45.865	133	68	2	58	187	26	157	5.34e-35	124
MS.gene030652.t1	AT5G01880	39.572	187	84	6	12	197	1	159	1.55e-28	105
MS.gene030652.t1	AT2G17450	40.690	145	64	5	59	194	25	156	2.14e-28	106
MS.gene030652.t1	AT4G35480	39.073	151	71	5	59	194	23	167	4.47e-27	103
MS.gene030652.t1	AT4G17245	40.299	134	63	3	52	183	27	145	3.18e-26	100
MS.gene030652.t1	AT5G47610	37.879	132	70	3	52	183	30	149	4.97e-26	99.8
MS.gene030652.t1	AT4G40070	34.395	157	93	4	65	216	49	200	2.64e-20	87.8
MS.gene030652.t1	AT1G22500	34.307	137	84	3	54	187	31	164	3.90e-19	85.5
MS.gene030652.t1	AT1G72200	31.902	163	86	5	57	213	58	201	1.09e-18	84.3
MS.gene030652.t1	AT1G72310	47.436	78	39	1	110	187	98	173	4.27e-18	82.0
MS.gene030652.t1	AT2G46494	29.255	188	121	5	2	183	177	358	4.56e-18	82.0
MS.gene030652.t1	AT5G57750	32.283	127	81	2	62	184	40	165	5.79e-18	79.7
MS.gene030652.t1	AT2G35000	33.083	133	85	2	59	187	49	181	6.00e-18	82.0
MS.gene030652.t1	AT1G74410	39.560	91	54	1	96	186	132	221	8.40e-18	79.3
MS.gene030652.t1	AT3G14320	47.887	71	35	1	114	184	63	131	1.73e-17	78.2
MS.gene030652.t1	AT1G53820	40.217	92	52	2	110	200	91	180	5.17e-17	78.6
MS.gene030652.t1	AT3G16720	40.476	84	47	2	110	193	90	170	5.65e-17	78.6
MS.gene030652.t1	AT3G05200	42.222	90	48	2	113	200	98	185	1.13e-16	78.6
MS.gene030652.t1	AT1G04360	30.827	133	80	3	62	183	45	176	1.29e-16	78.2
MS.gene030652.t1	AT1G28040	36.538	104	63	2	83	183	192	295	2.60e-16	76.6
MS.gene030652.t1	AT4G09100	32.787	122	75	3	64	183	11	127	2.95e-16	73.2
MS.gene030652.t1	AT2G20030	45.714	70	37	1	114	183	98	166	2.99e-16	77.4
MS.gene030652.t1	AT4G17905	66.667	45	15	0	139	183	179	223	3.36e-16	76.6
MS.gene030652.t1	AT4G17905	66.667	45	15	0	139	183	153	197	3.46e-16	76.3
MS.gene030652.t1	AT2G27940	36.782	87	53	1	108	194	109	193	4.08e-16	75.1
MS.gene030652.t1	AT4G09120	45.205	73	38	1	113	183	93	165	4.40e-16	76.3
MS.gene030652.t1	AT3G03550	64.444	45	16	0	139	183	157	201	5.30e-16	76.3
MS.gene030652.t1	AT4G09110	32.231	121	74	2	65	183	51	165	5.64e-16	75.9
MS.gene030652.t1	AT1G23980	31.788	151	82	5	54	187	44	190	5.87e-16	76.3
MS.gene030652.t1	AT1G32361	34.752	141	81	5	84	223	101	231	6.11e-16	75.9
MS.gene030652.t1	AT4G15975	38.636	88	52	1	96	183	33	118	6.39e-16	74.7
MS.gene030652.t1	AT2G18650	42.308	78	45	0	110	187	95	172	7.05e-16	76.3
MS.gene030652.t1	AT3G62690	36.538	104	54	3	115	216	88	181	9.37e-16	74.3
MS.gene030652.t1	AT5G17600	43.056	72	40	1	112	183	114	184	9.85e-16	75.5
MS.gene030652.t1	AT4G30400	40.000	75	45	0	109	183	102	176	1.02e-15	75.9
MS.gene030652.t1	AT5G42200	40.541	74	43	1	110	183	74	146	1.14e-15	72.4
MS.gene030652.t1	AT5G27420	36.893	103	48	3	111	210	92	180	1.28e-15	75.1
MS.gene030652.t1	AT2G42360	32.000	125	72	2	62	183	36	150	1.29e-15	73.6
MS.gene030652.t1	AT4G10160	32.540	126	75	3	65	187	25	143	1.73e-15	73.2
MS.gene030652.t1	AT5G66070	42.105	76	41	2	111	186	149	221	1.74e-15	73.2
MS.gene030652.t1	AT5G66070	42.105	76	41	2	111	186	149	221	1.74e-15	73.2
MS.gene030652.t1	AT5G66070	42.105	76	41	2	111	186	173	245	2.34e-15	73.2
MS.gene030652.t1	AT1G35330	41.026	78	44	1	111	186	97	174	2.35e-15	74.3
MS.gene030652.t1	AT4G28890	42.254	71	40	1	114	184	97	166	2.88e-15	74.7
MS.gene030652.t1	AT4G09130	42.667	75	41	1	111	183	88	162	4.67e-15	73.6
MS.gene030652.t1	AT2G35420	29.677	155	100	6	64	218	30	175	4.69e-15	72.4
MS.gene030652.t1	AT5G05810	41.667	72	41	1	112	183	118	188	6.15e-15	73.6
MS.gene030652.t1	AT1G72220	46.970	66	31	1	139	200	175	240	9.52e-15	73.2
MS.gene030652.t1	AT2G46493	29.851	134	91	2	53	183	47	180	9.55e-15	70.5
MS.gene030652.t1	AT2G34990	28.105	153	102	3	59	209	34	180	9.61e-15	72.4
MS.gene030652.t1	AT2G34990	28.105	153	102	3	59	209	12	158	1.07e-14	72.0
MS.gene030652.t1	AT2G17730	41.333	75	42	1	112	184	165	239	1.07e-14	71.2
MS.gene030652.t1	AT5G06490	33.333	102	52	2	114	209	96	187	1.19e-14	70.5
MS.gene030652.t1	AT4G17920	31.061	132	84	2	62	186	24	155	1.75e-14	71.2
MS.gene030652.t1	AT3G48030	37.662	77	48	0	110	186	98	174	1.76e-14	71.2
MS.gene030652.t1	AT3G48030	32.090	134	75	3	69	186	119	252	2.41e-14	71.6
MS.gene030652.t1	AT4G35840	41.333	75	42	1	112	184	160	234	2.96e-14	70.1
MS.gene030652.t1	AT4G33565	52.941	51	24	0	139	189	215	265	3.97e-14	70.9
MS.gene030652.t1	AT3G61550	28.966	145	76	4	88	222	80	207	4.05e-14	69.3
MS.gene030652.t1	AT5G10380	37.975	79	48	1	109	187	104	181	4.19e-14	70.5
MS.gene030652.t1	AT2G25410	42.529	87	47	2	100	183	283	369	4.68e-14	70.9
MS.gene030652.t1	AT5G43420	27.273	143	83	2	62	183	38	180	5.26e-14	70.9
MS.gene030652.t1	AT2G46160	32.039	103	57	2	114	209	104	200	6.66e-14	68.6
MS.gene030652.t1	AT2G46160	32.039	103	57	2	114	209	104	200	6.66e-14	68.6
MS.gene030652.t1	AT2G47560	42.466	73	41	1	112	183	78	150	7.29e-14	68.9
MS.gene030652.t1	AT5G58580	40.789	76	45	0	112	187	109	184	1.11e-13	69.3
MS.gene030652.t1	AT2G18670	36.000	75	48	0	109	183	78	152	1.13e-13	67.4
MS.gene030652.t1	AT5G36001	63.043	46	17	0	138	183	261	306	1.66e-13	68.9
MS.gene030652.t1	AT2G35910	35.227	88	56	1	114	201	121	207	1.68e-13	67.8
MS.gene030652.t1	AT3G18930	34.234	111	57	4	114	214	120	224	1.68e-13	69.3
MS.gene030652.t1	AT3G18930	34.234	111	57	4	114	214	120	224	1.68e-13	69.3
MS.gene030652.t1	AT3G18930	34.234	111	57	4	114	214	120	224	1.68e-13	69.3
MS.gene030652.t1	AT5G07040	34.177	79	51	1	106	183	58	136	3.54e-13	65.5
MS.gene030652.t1	AT2G34000	37.333	75	44	1	113	184	60	134	4.01e-13	65.1
MS.gene030652.t1	AT4G10150	30.233	129	84	3	63	187	31	157	4.48e-13	66.6
MS.gene030652.t1	AT5G53110	39.437	71	42	1	114	183	302	372	4.88e-13	67.8
MS.gene030652.t1	AT2G46495	40.789	76	43	1	110	183	287	362	5.26e-13	67.8
MS.gene030652.t1	AT3G19140	40.845	71	40	1	114	184	54	122	6.00e-13	64.3
MS.gene030652.t1	AT2G46495	40.789	76	43	1	110	183	259	334	6.12e-13	67.4
MS.gene030652.t1	AT5G40250	50.000	48	24	0	140	187	142	189	7.09e-13	67.4
MS.gene030652.t1	AT1G33480	28.713	101	69	2	114	214	75	172	2.15e-12	65.1
MS.gene030652.t1	AT2G37580	34.483	87	51	2	97	183	104	184	2.71e-12	64.7
MS.gene030652.t1	AT3G11110	36.145	83	53	0	101	183	67	149	2.76e-12	63.2
MS.gene030652.t1	AT2G42350	30.841	107	62	3	77	183	48	142	4.87e-12	63.5
MS.gene030652.t1	AT5G56340	38.272	81	42	2	103	183	228	300	9.26e-12	64.3
MS.gene030652.t1	AT4G30370	35.616	73	46	1	112	184	87	158	9.50e-12	62.0
MS.gene030652.t1	AT4G26400	42.647	68	31	2	116	183	223	282	9.82e-12	63.9
MS.gene030652.t1	AT4G26400	42.647	68	31	2	116	183	223	282	9.82e-12	63.9
MS.gene030652.t1	AT3G20395	32.283	127	81	3	60	186	95	216	1.33e-11	62.4
MS.gene030652.t1	AT1G53010	50.000	50	25	0	140	189	129	178	1.36e-11	61.6
MS.gene030652.t1	AT5G46650	30.323	155	93	6	45	186	8	160	1.77e-11	62.8
MS.gene030652.t1	AT4G26580	36.709	79	44	2	113	186	256	333	4.18e-11	62.0
MS.gene030652.t1	AT4G26580	36.709	79	44	2	113	186	256	333	4.18e-11	62.0
MS.gene030652.t1	AT2G03000	52.273	44	20	1	140	183	480	522	5.39e-11	62.0
MS.gene030652.t1	AT3G47990	54.000	50	22	1	134	183	228	276	6.15e-11	61.6
MS.gene030652.t1	AT3G47990	54.000	50	22	1	134	183	171	219	6.35e-11	61.2
MS.gene030652.t1	AT3G47990	54.000	50	22	1	134	183	171	219	6.35e-11	61.2
MS.gene030652.t1	AT3G47990	54.000	50	22	1	134	183	171	219	6.35e-11	61.2
MS.gene030652.t1	AT3G47990	54.000	50	22	1	134	183	212	260	6.44e-11	61.6
MS.gene030652.t1	AT4G11360	35.714	84	50	2	102	183	48	129	9.18e-11	58.9

Find 40 sgRNAs with CRISPR-Local

Find 42 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
AATTCAACCAACTCATATTT+TGG	0.110117	4.3:+8619420	MS.gene030652:CDS
AATATGAGTTGGTTGAATTT+TGG	0.155497	4.3:-8619416	None:intergenic
TCTGGCACTGGTAACAAAAT+TGG	0.215829	4.3:-8619879	None:intergenic
TGGATTGCTATAATAATTTC+TGG	0.238268	4.3:-8619897	None:intergenic
ATTGATGTTCAATTGAATTT+TGG	0.255066	4.3:-8619359	None:intergenic
CGAGTTGAATCTACCAAGTT+TGG	0.287389	4.3:+8619671	MS.gene030652:CDS
CTTGAAACTTGTCGAAAGAT+TGG	0.318725	4.3:+8619840	MS.gene030652:CDS
TGAAAACCATGGTTGCATTT+AGG	0.347715	4.3:-8619753	None:intergenic
TTTGGCTATTTGTGAAAATA+CGG	0.358119	4.3:-8619398	None:intergenic
ACCACTTGAGCACGAAGCTT+TGG	0.379749	4.3:+8619920	MS.gene030652:CDS
TTGCATTAAACTTCATCATA+AGG	0.411192	4.3:+8619511	MS.gene030652:CDS
CAACAACAATCCACCTCAAT+TGG	0.419352	4.3:+8619590	MS.gene030652:CDS
ATGTTCGTTGCATTGACAAA+TGG	0.437642	4.3:+8619775	MS.gene030652:CDS
GCTATAATAATTTCTGGCAC+TGG	0.465203	4.3:-8619891	None:intergenic
TCGGTGGAATAGCTCATTGT+AGG	0.466374	4.3:-8619651	None:intergenic
ATTCCTTTGTTGACCAATTG+AGG	0.479348	4.3:-8619603	None:intergenic
AGAGTTCACAAAGGGTGAAA+AGG	0.489010	4.3:+8619719	MS.gene030652:CDS
TTGCATTGACAAATGGCTAA+AGG	0.492896	4.3:+8619782	MS.gene030652:CDS
AAGCTTCGTGCTCAAGTGGT+TGG	0.506524	4.3:-8619917	None:intergenic
TTGGCTATTTGTGAAAATAC+GGG	0.508540	4.3:-8619397	None:intergenic
TTGTAGAATCTCACACAAGA+AGG	0.511006	4.3:+8619328	MS.gene030652:CDS
TCCAAAGCTTCGTGCTCAAG+TGG	0.522894	4.3:-8619921	None:intergenic
ATGGAGAAGTGGTGAAGTAA+AGG	0.523047	4.3:-8619298	None:intergenic
TCGAAAGATTGGTGGGTCGC+AGG	0.526432	4.3:+8619851	MS.gene030652:CDS
AGAAGACATTGTCTACACTT+AGG	0.531664	4.3:-8619819	None:intergenic
ACACACTCTGTATCCAAACT+TGG	0.542352	4.3:-8619684	None:intergenic
GAAACTTGTCGAAAGATTGG+TGG	0.551880	4.3:+8619843	MS.gene030652:CDS
TATGATGAAGTTTAATGCAA+GGG	0.555043	4.3:-8619508	None:intergenic
ACGAGCTCCAAAATATGAGT+TGG	0.556220	4.3:-8619427	None:intergenic
TTATGATGAAGTTTAATGCA+AGG	0.569193	4.3:-8619509	None:intergenic
CCTTTGTTGACCAATTGAGG+TGG	0.571148	4.3:-8619600	None:intergenic
TGTCTCTCAGAGTTCACAAA+GGG	0.586259	4.3:+8619711	MS.gene030652:CDS
AAACTTGTCGAAAGATTGGT+GGG	0.592454	4.3:+8619844	MS.gene030652:CDS
GAGATTCTACAAGAAGCTCA+TGG	0.595637	4.3:-8619317	None:intergenic
CCACCTCAATTGGTCAACAA+AGG	0.601823	4.3:+8619600	MS.gene030652:CDS
ACAAGAAGCTCATGGAGAAG+TGG	0.602538	4.3:-8619309	None:intergenic
CAAACTTGGTAGATTCAACT+CGG	0.621643	4.3:-8619670	None:intergenic
ATGTCTCTCAGAGTTCACAA+AGG	0.686490	4.3:+8619710	MS.gene030652:CDS
TGCAACGAACATGAAAACCA+TGG	0.695842	4.3:-8619764	None:intergenic
ACTTGGTAGATTCAACTCGG+TGG	0.705125	4.3:-8619667	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	AGCTACATTTAAAAATCTTA+AGG	-	chr4.3:8619541-8619560	None:intergenic	20.0%
!!!	ATTGATGTTCAATTGAATTT+TGG	-	chr4.3:8619362-8619381	None:intergenic	20.0%
!	TATGATGAAGTTTAATGCAA+GGG	-	chr4.3:8619511-8619530	None:intergenic	25.0%
!	TGGATTGCTATAATAATTTC+TGG	-	chr4.3:8619900-8619919	None:intergenic	25.0%
!	TTATGATGAAGTTTAATGCA+AGG	-	chr4.3:8619512-8619531	None:intergenic	25.0%
!	TTGCATTAAACTTCATCATA+AGG	+	chr4.3:8619511-8619530	MS.gene030652:CDS	25.0%
!	TTTGGCTATTTGTGAAAATA+CGG	-	chr4.3:8619401-8619420	None:intergenic	25.0%
!!	AATTCAACCAACTCATATTT+TGG	+	chr4.3:8619420-8619439	MS.gene030652:CDS	25.0%
!!!	AATATGAGTTGGTTGAATTT+TGG	-	chr4.3:8619419-8619438	None:intergenic	25.0%
	TTGGCTATTTGTGAAAATAC+GGG	-	chr4.3:8619400-8619419	None:intergenic	30.0%
	AAACTTGTCGAAAGATTGGT+GGG	+	chr4.3:8619844-8619863	MS.gene030652:CDS	35.0%
	AGAAGACATTGTCTACACTT+AGG	-	chr4.3:8619822-8619841	None:intergenic	35.0%
	ATTCCTTTGTTGACCAATTG+AGG	-	chr4.3:8619606-8619625	None:intergenic	35.0%
	CAAACTTGGTAGATTCAACT+CGG	-	chr4.3:8619673-8619692	None:intergenic	35.0%
	CTTGAAACTTGTCGAAAGAT+TGG	+	chr4.3:8619840-8619859	MS.gene030652:CDS	35.0%
	TGAAAACCATGGTTGCATTT+AGG	-	chr4.3:8619756-8619775	None:intergenic	35.0%
	TTGTAGAATCTCACACAAGA+AGG	+	chr4.3:8619328-8619347	MS.gene030652:CDS	35.0%
!	ATGTTCGTTGCATTGACAAA+TGG	+	chr4.3:8619775-8619794	MS.gene030652:CDS	35.0%
!	ATTTTGCCTAAATGCAACCA+TGG	+	chr4.3:8619747-8619766	MS.gene030652:CDS	35.0%
!	TTGCATTGACAAATGGCTAA+AGG	+	chr4.3:8619782-8619801	MS.gene030652:CDS	35.0%
!!	GCTATAATAATTTCTGGCAC+TGG	-	chr4.3:8619894-8619913	None:intergenic	35.0%
	ACACACTCTGTATCCAAACT+TGG	-	chr4.3:8619687-8619706	None:intergenic	40.0%
	ACGAGCTCCAAAATATGAGT+TGG	-	chr4.3:8619430-8619449	None:intergenic	40.0%
	AGAGTTCACAAAGGGTGAAA+AGG	+	chr4.3:8619719-8619738	MS.gene030652:CDS	40.0%
	ATGGAGAAGTGGTGAAGTAA+AGG	-	chr4.3:8619301-8619320	None:intergenic	40.0%
	ATGTCTCTCAGAGTTCACAA+AGG	+	chr4.3:8619710-8619729	MS.gene030652:CDS	40.0%
	CAACAACAATCCACCTCAAT+TGG	+	chr4.3:8619590-8619609	MS.gene030652:CDS	40.0%
	GAAACTTGTCGAAAGATTGG+TGG	+	chr4.3:8619843-8619862	MS.gene030652:CDS	40.0%
	GAGATTCTACAAGAAGCTCA+TGG	-	chr4.3:8619320-8619339	None:intergenic	40.0%
	TGCAACGAACATGAAAACCA+TGG	-	chr4.3:8619767-8619786	None:intergenic	40.0%
	TGTCTCTCAGAGTTCACAAA+GGG	+	chr4.3:8619711-8619730	MS.gene030652:CDS	40.0%
!	CGAGTTGAATCTACCAAGTT+TGG	+	chr4.3:8619671-8619690	MS.gene030652:CDS	40.0%
!!	TCTGGCACTGGTAACAAAAT+TGG	-	chr4.3:8619882-8619901	None:intergenic	40.0%
	ACAAGAAGCTCATGGAGAAG+TGG	-	chr4.3:8619312-8619331	None:intergenic	45.0%
	ACTTGGTAGATTCAACTCGG+TGG	-	chr4.3:8619670-8619689	None:intergenic	45.0%
	CCACCTCAATTGGTCAACAA+AGG	+	chr4.3:8619600-8619619	MS.gene030652:CDS	45.0%
	CCTTTGTTGACCAATTGAGG+TGG	-	chr4.3:8619603-8619622	None:intergenic	45.0%
	TCGGTGGAATAGCTCATTGT+AGG	-	chr4.3:8619654-8619673	None:intergenic	45.0%
	AAGCTTCGTGCTCAAGTGGT+TGG	-	chr4.3:8619920-8619939	None:intergenic	50.0%
	ACCACTTGAGCACGAAGCTT+TGG	+	chr4.3:8619920-8619939	MS.gene030652:CDS	50.0%
	TCCAAAGCTTCGTGCTCAAG+TGG	-	chr4.3:8619924-8619943	None:intergenic	50.0%
!	TCGAAAGATTGGTGGGTCGC+AGG	+	chr4.3:8619851-8619870	MS.gene030652:CDS	55.0%

Chromosome	Type	Strat	End	Strand	Name
chr4.3	gene	8619282	8619977	8619282	ID=MS.gene030652
chr4.3	mRNA	8619282	8619977	8619282	ID=MS.gene030652.t1;Parent=MS.gene030652
chr4.3	exon	8619282	8619977	8619282	ID=MS.gene030652.t1.exon1;Parent=MS.gene030652.t1
chr4.3	CDS	8619282	8619977	8619282	ID=cds.MS.gene030652.t1;Parent=MS.gene030652.t1

Gene Sequence

>MS.gene030652

ATGTATACTTCTACTTCCTTTACTTCACCACTTCTCCATGAGCTTCTTGTAGAATCTCACACAAGAAGGTTACTCTTCCAAAATTCAATTGAACATCAATCACTTAAAATCAACTCCCGTATTTTCACAAATAGCCAAAATTCAACCAACTCATATTTTGGAGCTCGTGAATTTGATTCAAATGTTGTGATGATACTTGCAGTTCTATTATGTGCTTTTATTTGTTCCCTTGCATTAAACTTCATCATAAGGCGTGCCTTAAGATTTTTAAATGTAGCTCTCAACAACGACTCTTCTTCGAGTTCAAGCAACAACAATCCACCTCAATTGGTCAACAAAGGAATCAAGAAGAAAGCTCTCAAGAAATTTCCTACAATGAGCTATTCCACCGAGTTGAATCTACCAAGTTTGGATACAGAGTGTGTGATATGTCTCTCAGAGTTCACAAAGGGTGAAAAGGTGCGCATTTTGCCTAAATGCAACCATGGTTTTCATGTTCGTTGCATTGACAAATGGCTAAAGGAACACTCATCATGTCCTAAGTGTAGACAATGTCTTCTTGAAACTTGTCGAAAGATTGGTGGGTCGCAGGTGCAACCAATTTTGTTACCAGTGCCAGAAATTATTATAGCAATCCAACCACTTGAGCACGAAGCTTTGGAACGAAACTATAGAGAAATACAAGCTAACAATTAA

Protein sequence

>MS.gene030652.t1

MYTSTSFTSPLLHELLVESHTRRLLFQNSIEHQSLKINSRIFTNSQNSTNSYFGAREFDSNVVMILAVLLCAFICSLALNFIIRRALRFLNVALNNDSSSSSSNNNPPQLVNKGIKKKALKKFPTMSYSTELNLPSLDTECVICLSEFTKGEKVRILPKCNHGFHVRCIDKWLKEHSSCPKCRQCLLETCRKIGGSQVQPILLPVPEIIIAIQPLEHEALERNYREIQANN