Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene58107.t1 | XP_003630207.1 | 87.7 | 227 | 18 | 1 | 1 | 227 | 1 | 217 | 1.70E-105 | 392.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene58107.t1 | Q6NML0 | 45.8 | 214 | 95 | 5 | 21 | 226 | 23 | 223 | 1.2e-43 | 177.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene58107.t1 | G7LD44 | 87.7 | 227 | 18 | 1 | 1 | 227 | 1 | 217 | 1.2e-105 | 392.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049137 | MS.gene58107 | -0.804621 | 1.98E-49 | -1.69E-46 |
| MS.gene049320 | MS.gene58107 | -0.803045 | 4.20E-49 | -1.69E-46 |
| MS.gene04932 | MS.gene58107 | 0.850002 | 2.25E-60 | -1.69E-46 |
| MS.gene049549 | MS.gene58107 | 0.864195 | 1.45E-64 | -1.69E-46 |
| MS.gene049609 | MS.gene58107 | -0.82081 | 5.63E-53 | -1.69E-46 |
| MS.gene050095 | MS.gene58107 | 0.808673 | 2.76E-50 | -1.69E-46 |
| MS.gene050096 | MS.gene58107 | 0.813366 | 2.65E-51 | -1.69E-46 |
| MS.gene050593 | MS.gene58107 | -0.802775 | 4.78E-49 | -1.69E-46 |
| MS.gene050772 | MS.gene58107 | -0.814628 | 1.40E-51 | -1.69E-46 |
| MS.gene05105 | MS.gene58107 | -0.814478 | 1.51E-51 | -1.69E-46 |
| MS.gene051874 | MS.gene58107 | -0.812962 | 3.26E-51 | -1.69E-46 |
| MS.gene052211 | MS.gene58107 | 0.877391 | 6.53E-69 | -1.69E-46 |
| MS.gene052212 | MS.gene58107 | 0.810576 | 1.08E-50 | -1.69E-46 |
| MS.gene05240 | MS.gene58107 | 0.842114 | 3.15E-58 | -1.69E-46 |
| MS.gene052414 | MS.gene58107 | -0.801605 | 8.32E-49 | -1.69E-46 |
| MS.gene052505 | MS.gene58107 | -0.80182 | 7.52E-49 | -1.69E-46 |
| MS.gene052606 | MS.gene58107 | 0.813166 | 2.94E-51 | -1.69E-46 |
| MS.gene053213 | MS.gene58107 | -0.803718 | 3.05E-49 | -1.69E-46 |
| MS.gene053403 | MS.gene58107 | 0.806981 | 6.32E-50 | -1.69E-46 |
| MS.gene053406 | MS.gene58107 | 0.847416 | 1.17E-59 | -1.69E-46 |
| MS.gene053420 | MS.gene58107 | 0.822576 | 2.20E-53 | -1.69E-46 |
| MS.gene053436 | MS.gene58107 | -0.802663 | 5.04E-49 | -1.69E-46 |
| MS.gene053449 | MS.gene58107 | -0.800808 | 1.21E-48 | -1.69E-46 |
| MS.gene053574 | MS.gene58107 | -0.820534 | 6.52E-53 | -1.69E-46 |
| MS.gene053824 | MS.gene58107 | -0.80246 | 5.55E-49 | -1.69E-46 |
| MS.gene053887 | MS.gene58107 | 0.818737 | 1.68E-52 | -1.69E-46 |
| MS.gene053916 | MS.gene58107 | -0.800224 | 1.59E-48 | -1.69E-46 |
| MS.gene054146 | MS.gene58107 | 0.880111 | 7.18E-70 | -1.69E-46 |
| MS.gene054181 | MS.gene58107 | 0.82504 | 5.82E-54 | -1.69E-46 |
| MS.gene054421 | MS.gene58107 | 0.821268 | 4.42E-53 | -1.69E-46 |
| MS.gene054706 | MS.gene58107 | 0.818935 | 1.51E-52 | -1.69E-46 |
| MS.gene054742 | MS.gene58107 | 0.835967 | 1.23E-56 | -1.69E-46 |
| MS.gene054884 | MS.gene58107 | 0.803877 | 2.83E-49 | -1.69E-46 |
| MS.gene05505 | MS.gene58107 | -0.800652 | 1.30E-48 | -1.69E-46 |
| MS.gene055154 | MS.gene58107 | 0.807184 | 5.72E-50 | -1.69E-46 |
| MS.gene055240 | MS.gene58107 | 0.833537 | 5.04E-56 | -1.69E-46 |
| MS.gene055289 | MS.gene58107 | -0.806401 | 8.37E-50 | -1.69E-46 |
| MS.gene055502 | MS.gene58107 | -0.807167 | 5.77E-50 | -1.69E-46 |
| MS.gene055741 | MS.gene58107 | -0.805254 | 1.46E-49 | -1.69E-46 |
| MS.gene055744 | MS.gene58107 | -0.803751 | 3.00E-49 | -1.69E-46 |
| MS.gene056218 | MS.gene58107 | 0.826399 | 2.77E-54 | -1.69E-46 |
| MS.gene056224 | MS.gene58107 | 0.821379 | 4.17E-53 | -1.69E-46 |
| MS.gene056330 | MS.gene58107 | 0.825865 | 3.71E-54 | -1.69E-46 |
| MS.gene056422 | MS.gene58107 | -0.804433 | 2.17E-49 | -1.69E-46 |
| MS.gene056504 | MS.gene58107 | -0.80303 | 4.23E-49 | -1.69E-46 |
| MS.gene056590 | MS.gene58107 | 0.82629 | 2.94E-54 | -1.69E-46 |
| MS.gene056591 | MS.gene58107 | 0.827857 | 1.24E-54 | -1.69E-46 |
| MS.gene056748 | MS.gene58107 | 0.819144 | 1.35E-52 | -1.69E-46 |
| MS.gene056920 | MS.gene58107 | 0.842316 | 2.79E-58 | -1.69E-46 |
| MS.gene056922 | MS.gene58107 | 0.803295 | 3.73E-49 | -1.69E-46 |
| MS.gene057048 | MS.gene58107 | -0.800195 | 1.62E-48 | -1.69E-46 |
| MS.gene057261 | MS.gene58107 | 0.803824 | 2.90E-49 | -1.69E-46 |
| MS.gene057544 | MS.gene58107 | 0.812097 | 5.03E-51 | -1.69E-46 |
| MS.gene057547 | MS.gene58107 | 0.808346 | 3.24E-50 | -1.69E-46 |
| MS.gene057550 | MS.gene58107 | 0.800653 | 1.30E-48 | -1.69E-46 |
| MS.gene057768 | MS.gene58107 | 0.805004 | 1.65E-49 | -1.69E-46 |
| MS.gene05837 | MS.gene58107 | -0.81807 | 2.37E-52 | -1.69E-46 |
| MS.gene058419 | MS.gene58107 | -0.803333 | 3.66E-49 | -1.69E-46 |
| MS.gene058603 | MS.gene58107 | 0.833893 | 4.11E-56 | -1.69E-46 |
| MS.gene058838 | MS.gene58107 | -0.813533 | 2.44E-51 | -1.69E-46 |
| MS.gene059328 | MS.gene58107 | 0.803515 | 3.36E-49 | -1.69E-46 |
| MS.gene059402 | MS.gene58107 | 0.828058 | 1.11E-54 | -1.69E-46 |
| MS.gene059953 | MS.gene58107 | 0.831151 | 1.96E-55 | -1.69E-46 |
| MS.gene059955 | MS.gene58107 | 0.844495 | 7.30E-59 | -1.69E-46 |
| MS.gene060087 | MS.gene58107 | 0.843367 | 1.46E-58 | -1.69E-46 |
| MS.gene060372 | MS.gene58107 | -0.827237 | 1.75E-54 | -1.69E-46 |
| MS.gene060593 | MS.gene58107 | 0.836994 | 6.75E-57 | -1.69E-46 |
| MS.gene06077 | MS.gene58107 | -0.803126 | 4.04E-49 | -1.69E-46 |
| MS.gene060835 | MS.gene58107 | -0.813281 | 2.77E-51 | -1.69E-46 |
| MS.gene06097 | MS.gene58107 | -0.800353 | 1.50E-48 | -1.69E-46 |
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene58107.t1 | MTR_8g092970 | 88.987 | 227 | 15 | 1 | 1 | 227 | 1 | 217 | 8.24e-139 | 387 |
| MS.gene58107.t1 | MTR_8g092840 | 82.743 | 226 | 38 | 1 | 1 | 226 | 1 | 225 | 8.62e-127 | 358 |
| MS.gene58107.t1 | MTR_8g092930 | 80.617 | 227 | 42 | 1 | 1 | 227 | 1 | 225 | 5.39e-125 | 353 |
| MS.gene58107.t1 | MTR_8g093010 | 79.913 | 229 | 34 | 5 | 1 | 227 | 1 | 219 | 4.21e-123 | 348 |
| MS.gene58107.t1 | MTR_8g092985 | 81.308 | 214 | 35 | 2 | 1 | 213 | 1 | 210 | 1.45e-116 | 331 |
| MS.gene58107.t1 | MTR_8g092990 | 82.018 | 228 | 39 | 2 | 1 | 227 | 1 | 227 | 4.93e-113 | 323 |
| MS.gene58107.t1 | MTR_8g092960 | 75.221 | 226 | 45 | 2 | 1 | 226 | 1 | 215 | 6.39e-112 | 320 |
| MS.gene58107.t1 | MTR_3g095560 | 61.538 | 234 | 76 | 4 | 1 | 227 | 1 | 227 | 3.17e-95 | 278 |
| MS.gene58107.t1 | MTR_3g094000 | 50.000 | 148 | 65 | 3 | 53 | 198 | 36 | 176 | 1.54e-43 | 144 |
| MS.gene58107.t1 | MTR_7g073200 | 48.611 | 144 | 65 | 3 | 45 | 187 | 18 | 153 | 9.06e-40 | 135 |
| MS.gene58107.t1 | MTR_3g116000 | 47.143 | 140 | 66 | 4 | 58 | 195 | 26 | 159 | 3.57e-35 | 124 |
| MS.gene58107.t1 | MTR_5g024730 | 42.945 | 163 | 73 | 5 | 54 | 207 | 26 | 177 | 3.84e-35 | 124 |
| MS.gene58107.t1 | MTR_8g073120 | 43.750 | 144 | 68 | 4 | 54 | 194 | 19 | 152 | 6.09e-32 | 115 |
| MS.gene58107.t1 | MTR_2g035800 | 37.419 | 155 | 84 | 3 | 30 | 184 | 4 | 145 | 2.53e-31 | 113 |
| MS.gene58107.t1 | MTR_4g094725 | 37.255 | 153 | 85 | 3 | 33 | 184 | 7 | 149 | 1.33e-29 | 108 |
| MS.gene58107.t1 | MTR_1g043410 | 29.592 | 196 | 117 | 7 | 30 | 216 | 11 | 194 | 2.61e-23 | 95.9 |
| MS.gene58107.t1 | MTR_7g113800 | 35.714 | 154 | 74 | 6 | 44 | 187 | 28 | 166 | 3.86e-21 | 90.5 |
| MS.gene58107.t1 | MTR_1g082550 | 33.562 | 146 | 90 | 3 | 44 | 187 | 33 | 173 | 1.40e-20 | 89.0 |
| MS.gene58107.t1 | MTR_3g110190 | 37.594 | 133 | 76 | 4 | 59 | 188 | 11 | 139 | 3.70e-20 | 87.8 |
| MS.gene58107.t1 | MTR_3g071300 | 32.192 | 146 | 92 | 2 | 44 | 186 | 10 | 151 | 2.55e-19 | 82.0 |
| MS.gene58107.t1 | MTR_4g120270 | 45.205 | 73 | 37 | 1 | 111 | 183 | 77 | 146 | 5.77e-19 | 83.2 |
| MS.gene58107.t1 | MTR_6g087150 | 33.939 | 165 | 94 | 4 | 24 | 184 | 9 | 162 | 1.18e-18 | 84.0 |
| MS.gene58107.t1 | MTR_8g023400 | 36.522 | 115 | 66 | 3 | 114 | 223 | 92 | 204 | 1.88e-18 | 82.8 |
| MS.gene58107.t1 | MTR_5g064980 | 36.364 | 132 | 73 | 4 | 61 | 186 | 56 | 182 | 3.16e-18 | 82.8 |
| MS.gene58107.t1 | MTR_7g117540 | 47.222 | 72 | 36 | 1 | 115 | 186 | 77 | 146 | 4.47e-18 | 81.3 |
| MS.gene58107.t1 | MTR_5g064990 | 29.143 | 175 | 116 | 5 | 52 | 221 | 55 | 226 | 6.96e-18 | 81.6 |
| MS.gene58107.t1 | MTR_6g055030 | 42.857 | 84 | 46 | 1 | 102 | 183 | 85 | 168 | 7.88e-18 | 80.9 |
| MS.gene58107.t1 | MTR_1g100737 | 44.578 | 83 | 42 | 1 | 112 | 190 | 90 | 172 | 9.05e-18 | 78.6 |
| MS.gene58107.t1 | MTR_3g099650 | 42.308 | 78 | 43 | 1 | 112 | 187 | 105 | 182 | 1.11e-17 | 80.9 |
| MS.gene58107.t1 | MTR_2g096350 | 62.500 | 48 | 18 | 0 | 136 | 183 | 130 | 177 | 1.44e-17 | 78.6 |
| MS.gene58107.t1 | MTR_4g063070 | 31.288 | 163 | 103 | 2 | 30 | 183 | 216 | 378 | 2.50e-17 | 80.1 |
| MS.gene58107.t1 | MTR_3g464780 | 40.404 | 99 | 49 | 2 | 92 | 187 | 87 | 178 | 2.92e-17 | 78.6 |
| MS.gene58107.t1 | MTR_2g436100 | 45.205 | 73 | 39 | 1 | 111 | 183 | 90 | 161 | 5.50e-17 | 78.2 |
| MS.gene58107.t1 | MTR_1g492830 | 40.260 | 77 | 46 | 0 | 113 | 189 | 60 | 136 | 1.16e-16 | 76.3 |
| MS.gene58107.t1 | MTR_7g116220 | 40.000 | 80 | 46 | 1 | 111 | 188 | 67 | 146 | 1.21e-16 | 75.1 |
| MS.gene58107.t1 | MTR_2g055790 | 33.333 | 123 | 72 | 2 | 65 | 187 | 34 | 146 | 1.22e-16 | 75.5 |
| MS.gene58107.t1 | MTR_5g066250 | 35.135 | 111 | 59 | 2 | 112 | 222 | 132 | 229 | 1.29e-16 | 78.2 |
| MS.gene58107.t1 | MTR_3g078450 | 35.714 | 112 | 69 | 2 | 92 | 202 | 54 | 163 | 1.41e-16 | 75.9 |
| MS.gene58107.t1 | MTR_5g082940 | 43.421 | 76 | 42 | 1 | 112 | 186 | 73 | 148 | 1.50e-16 | 74.7 |
| MS.gene58107.t1 | MTR_5g071930 | 42.553 | 94 | 48 | 3 | 113 | 206 | 65 | 152 | 2.26e-16 | 74.7 |
| MS.gene58107.t1 | MTR_3g100400 | 44.444 | 72 | 39 | 1 | 112 | 183 | 128 | 198 | 3.86e-16 | 77.0 |
| MS.gene58107.t1 | MTR_4g129420 | 41.772 | 79 | 46 | 0 | 109 | 187 | 112 | 190 | 4.18e-16 | 77.0 |
| MS.gene58107.t1 | MTR_5g064890 | 31.034 | 116 | 78 | 2 | 73 | 187 | 86 | 200 | 5.05e-16 | 76.3 |
| MS.gene58107.t1 | MTR_4g030070 | 36.905 | 84 | 51 | 1 | 104 | 187 | 75 | 156 | 6.44e-16 | 74.3 |
| MS.gene58107.t1 | MTR_4g056590 | 37.079 | 89 | 49 | 3 | 111 | 199 | 97 | 178 | 8.29e-16 | 73.2 |
| MS.gene58107.t1 | MTR_7g076250 | 40.278 | 72 | 43 | 0 | 112 | 183 | 61 | 132 | 8.71e-16 | 73.2 |
| MS.gene58107.t1 | MTR_8g066780 | 30.198 | 202 | 111 | 7 | 26 | 219 | 44 | 223 | 9.96e-16 | 75.5 |
| MS.gene58107.t1 | MTR_3g086700 | 41.250 | 80 | 45 | 1 | 109 | 186 | 41 | 120 | 1.02e-15 | 72.8 |
| MS.gene58107.t1 | MTR_8g089880 | 44.286 | 70 | 38 | 1 | 114 | 183 | 127 | 195 | 1.57e-15 | 73.9 |
| MS.gene58107.t1 | MTR_5g030010 | 27.778 | 180 | 112 | 5 | 61 | 223 | 59 | 237 | 1.61e-15 | 74.7 |
| MS.gene58107.t1 | MTR_1g070140 | 41.026 | 78 | 44 | 2 | 107 | 183 | 96 | 172 | 1.62e-15 | 74.7 |
| MS.gene58107.t1 | MTR_3g086730 | 41.250 | 80 | 45 | 1 | 109 | 186 | 41 | 120 | 1.98e-15 | 73.2 |
| MS.gene58107.t1 | MTR_4g093830 | 34.259 | 108 | 60 | 2 | 114 | 221 | 126 | 222 | 2.15e-15 | 74.3 |
| MS.gene58107.t1 | MTR_7g108855 | 36.957 | 92 | 49 | 2 | 115 | 197 | 67 | 158 | 3.59e-15 | 71.6 |
| MS.gene58107.t1 | MTR_8g074900 | 33.645 | 107 | 59 | 2 | 87 | 186 | 124 | 225 | 3.88e-15 | 72.0 |
| MS.gene58107.t1 | MTR_5g026730 | 30.216 | 139 | 89 | 4 | 49 | 183 | 2 | 136 | 5.27e-15 | 70.9 |
| MS.gene58107.t1 | MTR_6g007737 | 31.111 | 135 | 83 | 3 | 61 | 186 | 71 | 204 | 5.73e-15 | 73.2 |
| MS.gene58107.t1 | MTR_3g114500 | 33.058 | 121 | 73 | 3 | 63 | 183 | 1 | 113 | 6.53e-15 | 69.3 |
| MS.gene58107.t1 | MTR_3g078470 | 35.000 | 100 | 62 | 2 | 88 | 186 | 52 | 149 | 6.99e-15 | 71.2 |
| MS.gene58107.t1 | MTR_2g009310 | 44.286 | 70 | 38 | 1 | 114 | 183 | 135 | 203 | 8.57e-15 | 72.8 |
| MS.gene58107.t1 | MTR_1g074190 | 38.554 | 83 | 46 | 1 | 106 | 183 | 91 | 173 | 1.40e-14 | 72.0 |
| MS.gene58107.t1 | MTR_5g034790 | 41.558 | 77 | 44 | 1 | 110 | 186 | 112 | 187 | 1.49e-14 | 72.0 |
| MS.gene58107.t1 | MTR_2g090950 | 32.653 | 98 | 61 | 1 | 91 | 183 | 68 | 165 | 1.67e-14 | 70.5 |
| MS.gene58107.t1 | MTR_8g032690 | 40.580 | 69 | 38 | 1 | 141 | 209 | 19 | 84 | 1.77e-14 | 67.4 |
| MS.gene58107.t1 | MTR_8g099495 | 40.260 | 77 | 45 | 1 | 108 | 183 | 313 | 389 | 2.39e-14 | 71.6 |
| MS.gene58107.t1 | MTR_5g009190 | 40.000 | 80 | 47 | 1 | 105 | 183 | 257 | 336 | 2.53e-14 | 71.2 |
| MS.gene58107.t1 | MTR_5g009210 | 40.000 | 80 | 47 | 1 | 105 | 183 | 278 | 357 | 3.48e-14 | 70.9 |
| MS.gene58107.t1 | MTR_5g022920 | 39.474 | 76 | 45 | 1 | 112 | 186 | 159 | 234 | 3.71e-14 | 69.7 |
| MS.gene58107.t1 | MTR_7g116180 | 40.260 | 77 | 42 | 2 | 113 | 186 | 66 | 141 | 4.83e-14 | 68.2 |
| MS.gene58107.t1 | MTR_8g063660 | 39.241 | 79 | 47 | 1 | 110 | 188 | 64 | 141 | 4.86e-14 | 70.5 |
| MS.gene58107.t1 | MTR_2g090905 | 40.260 | 77 | 41 | 1 | 112 | 183 | 37 | 113 | 5.61e-14 | 66.6 |
| MS.gene58107.t1 | MTR_6g007680 | 43.662 | 71 | 39 | 1 | 113 | 183 | 39 | 108 | 7.41e-14 | 67.0 |
| MS.gene58107.t1 | MTR_8g028465 | 41.429 | 70 | 38 | 1 | 114 | 183 | 90 | 156 | 8.24e-14 | 68.2 |
| MS.gene58107.t1 | MTR_1g070425 | 40.260 | 77 | 42 | 2 | 113 | 186 | 67 | 142 | 9.98e-14 | 67.4 |
| MS.gene58107.t1 | MTR_5g076990 | 45.333 | 75 | 38 | 1 | 112 | 183 | 74 | 148 | 1.02e-13 | 69.3 |
| MS.gene58107.t1 | MTR_3g012550 | 26.119 | 134 | 95 | 2 | 51 | 183 | 20 | 150 | 1.06e-13 | 67.4 |
| MS.gene58107.t1 | MTR_4g106680 | 38.667 | 75 | 45 | 1 | 109 | 183 | 101 | 174 | 1.17e-13 | 68.9 |
| MS.gene58107.t1 | MTR_5g009200 | 32.258 | 124 | 78 | 2 | 61 | 183 | 274 | 392 | 1.60e-13 | 69.3 |
| MS.gene58107.t1 | MTR_5g026720 | 55.814 | 43 | 19 | 0 | 141 | 183 | 93 | 135 | 1.71e-13 | 66.2 |
| MS.gene58107.t1 | MTR_1g026070 | 36.486 | 74 | 43 | 1 | 110 | 183 | 44 | 113 | 2.09e-13 | 65.5 |
| MS.gene58107.t1 | MTR_6g007670 | 40.260 | 77 | 41 | 2 | 110 | 183 | 1 | 75 | 2.31e-13 | 67.8 |
| MS.gene58107.t1 | MTR_6g007670 | 48.611 | 72 | 35 | 2 | 113 | 183 | 144 | 214 | 1.36e-12 | 65.5 |
| MS.gene58107.t1 | MTR_1g056350 | 37.662 | 77 | 44 | 2 | 110 | 183 | 70 | 145 | 2.37e-13 | 66.2 |
| MS.gene58107.t1 | MTR_5g092790 | 43.836 | 73 | 38 | 2 | 113 | 183 | 156 | 227 | 2.62e-13 | 67.4 |
| MS.gene58107.t1 | MTR_2g041200 | 41.429 | 70 | 41 | 0 | 122 | 191 | 90 | 159 | 2.75e-13 | 66.2 |
| MS.gene58107.t1 | MTR_3g091620 | 31.200 | 125 | 69 | 4 | 111 | 223 | 98 | 217 | 2.88e-13 | 68.2 |
| MS.gene58107.t1 | MTR_8g099515 | 44.444 | 72 | 37 | 2 | 114 | 183 | 309 | 379 | 6.72e-13 | 67.4 |
| MS.gene58107.t1 | MTR_7g079290 | 32.941 | 85 | 52 | 2 | 113 | 193 | 124 | 207 | 7.95e-13 | 65.5 |
| MS.gene58107.t1 | MTR_4g108830 | 36.449 | 107 | 49 | 2 | 86 | 184 | 122 | 217 | 1.03e-12 | 65.5 |
| MS.gene58107.t1 | MTR_8g071815 | 53.333 | 45 | 21 | 0 | 139 | 183 | 88 | 132 | 1.26e-12 | 64.3 |
| MS.gene58107.t1 | MTR_7g059360 | 45.614 | 57 | 31 | 0 | 128 | 184 | 145 | 201 | 1.60e-12 | 65.1 |
| MS.gene58107.t1 | MTR_3g087900 | 44.444 | 72 | 35 | 3 | 117 | 187 | 48 | 115 | 2.24e-12 | 63.2 |
| MS.gene58107.t1 | MTR_5g026260 | 44.776 | 67 | 35 | 2 | 118 | 183 | 482 | 547 | 2.43e-12 | 65.9 |
| MS.gene58107.t1 | MTR_3g091200 | 38.028 | 71 | 43 | 1 | 114 | 183 | 303 | 373 | 2.55e-12 | 65.9 |
| MS.gene58107.t1 | MTR_5g092750 | 45.205 | 73 | 37 | 2 | 113 | 183 | 156 | 227 | 2.78e-12 | 64.3 |
| MS.gene58107.t1 | MTR_7g079280 | 36.620 | 71 | 44 | 1 | 114 | 183 | 80 | 150 | 2.83e-12 | 63.5 |
| MS.gene58107.t1 | MTR_4g108830 | 40.698 | 86 | 40 | 1 | 99 | 184 | 115 | 189 | 3.19e-12 | 63.5 |
| MS.gene58107.t1 | MTR_3g078120 | 33.333 | 126 | 81 | 3 | 61 | 183 | 2 | 127 | 3.41e-12 | 62.4 |
| MS.gene58107.t1 | MTR_8g066740 | 41.892 | 74 | 40 | 1 | 113 | 183 | 75 | 148 | 6.85e-12 | 63.9 |
| MS.gene58107.t1 | MTR_1g090480 | 31.667 | 120 | 74 | 3 | 71 | 184 | 28 | 145 | 1.02e-11 | 61.6 |
| MS.gene58107.t1 | MTR_4g116460 | 41.096 | 73 | 33 | 4 | 117 | 183 | 415 | 483 | 1.24e-11 | 63.9 |
| MS.gene58107.t1 | MTR_4g116460 | 41.096 | 73 | 33 | 4 | 117 | 183 | 458 | 526 | 1.33e-11 | 63.9 |
| MS.gene58107.t1 | MTR_7g096690 | 26.667 | 135 | 81 | 4 | 61 | 183 | 14 | 142 | 2.26e-11 | 62.8 |
| MS.gene58107.t1 | MTR_6g055030 | 56.098 | 41 | 18 | 0 | 143 | 183 | 97 | 137 | 2.43e-11 | 62.4 |
| MS.gene58107.t1 | MTR_7g116200 | 38.028 | 71 | 42 | 1 | 113 | 183 | 67 | 135 | 2.44e-11 | 60.8 |
| MS.gene58107.t1 | MTR_2g079320 | 36.250 | 80 | 46 | 1 | 112 | 186 | 125 | 204 | 4.09e-11 | 60.8 |
| MS.gene58107.t1 | MTR_8g019710 | 54.545 | 44 | 20 | 0 | 140 | 183 | 53 | 96 | 5.01e-11 | 58.9 |
| MS.gene58107.t1 | MTR_4g022410 | 48.214 | 56 | 29 | 0 | 128 | 183 | 100 | 155 | 5.04e-11 | 60.1 |
| MS.gene58107.t1 | MTR_7g117350 | 34.667 | 75 | 44 | 1 | 114 | 183 | 290 | 364 | 5.86e-11 | 61.6 |
| MS.gene58107.t1 | MTR_3g081030 | 34.066 | 91 | 56 | 2 | 93 | 183 | 75 | 161 | 6.07e-11 | 60.5 |
| MS.gene58107.t1 | MTR_7g117350 | 34.667 | 75 | 44 | 1 | 114 | 183 | 282 | 356 | 6.27e-11 | 61.6 |
| MS.gene58107.t1 | MTR_8g009190 | 50.000 | 48 | 24 | 0 | 140 | 187 | 104 | 151 | 6.79e-11 | 61.2 |
| MS.gene58107.t1 | MTR_1g096780 | 37.500 | 72 | 43 | 2 | 114 | 184 | 208 | 278 | 8.02e-11 | 61.2 |
| MS.gene58107.t1 | MTR_2g044570 | 45.833 | 48 | 26 | 0 | 140 | 187 | 82 | 129 | 9.02e-11 | 60.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene58107.t1 | AT1G49230 | 47.945 | 219 | 94 | 3 | 11 | 225 | 17 | 219 | 1.37e-64 | 200 |
| MS.gene58107.t1 | AT1G49220 | 47.945 | 219 | 91 | 6 | 11 | 220 | 13 | 217 | 1.07e-61 | 193 |
| MS.gene58107.t1 | AT1G49200 | 44.397 | 232 | 106 | 6 | 4 | 226 | 7 | 224 | 5.32e-59 | 186 |
| MS.gene58107.t1 | AT1G49210 | 47.196 | 214 | 92 | 5 | 21 | 226 | 23 | 223 | 7.32e-58 | 183 |
| MS.gene58107.t1 | AT3G18773 | 42.667 | 225 | 111 | 5 | 6 | 226 | 8 | 218 | 4.02e-53 | 171 |
| MS.gene58107.t1 | AT5G05280 | 48.684 | 152 | 70 | 2 | 46 | 197 | 26 | 169 | 1.37e-44 | 147 |
| MS.gene58107.t1 | AT3G10910 | 50.376 | 133 | 63 | 3 | 57 | 187 | 29 | 160 | 1.77e-40 | 137 |
| MS.gene58107.t1 | AT1G20823 | 42.604 | 169 | 79 | 5 | 23 | 187 | 3 | 157 | 7.86e-38 | 130 |
| MS.gene58107.t1 | AT1G76410 | 44.295 | 149 | 75 | 3 | 41 | 187 | 8 | 150 | 3.12e-37 | 129 |
| MS.gene58107.t1 | AT5G01880 | 48.592 | 142 | 60 | 4 | 57 | 197 | 30 | 159 | 8.53e-31 | 111 |
| MS.gene58107.t1 | AT2G17450 | 38.194 | 144 | 70 | 3 | 58 | 194 | 25 | 156 | 1.44e-28 | 106 |
| MS.gene58107.t1 | AT4G17245 | 40.458 | 131 | 62 | 2 | 54 | 183 | 30 | 145 | 1.57e-28 | 105 |
| MS.gene58107.t1 | AT5G47610 | 32.919 | 161 | 95 | 1 | 23 | 183 | 2 | 149 | 5.03e-27 | 102 |
| MS.gene58107.t1 | AT4G35480 | 37.500 | 152 | 73 | 5 | 58 | 194 | 23 | 167 | 4.03e-26 | 100 |
| MS.gene58107.t1 | AT1G72200 | 32.184 | 174 | 94 | 6 | 45 | 213 | 47 | 201 | 1.06e-21 | 92.4 |
| MS.gene58107.t1 | AT3G05200 | 30.088 | 226 | 120 | 7 | 24 | 222 | 18 | 232 | 1.93e-21 | 91.7 |
| MS.gene58107.t1 | AT4G40070 | 34.810 | 158 | 92 | 4 | 64 | 216 | 49 | 200 | 1.90e-20 | 88.2 |
| MS.gene58107.t1 | AT1G23980 | 33.520 | 179 | 98 | 8 | 34 | 193 | 20 | 196 | 5.44e-19 | 84.7 |
| MS.gene58107.t1 | AT4G09120 | 36.508 | 126 | 69 | 3 | 64 | 186 | 51 | 168 | 1.06e-18 | 83.6 |
| MS.gene58107.t1 | AT1G53820 | 40.860 | 93 | 50 | 3 | 110 | 200 | 91 | 180 | 2.60e-18 | 82.0 |
| MS.gene58107.t1 | AT1G72310 | 48.718 | 78 | 38 | 1 | 110 | 187 | 98 | 173 | 4.14e-18 | 81.6 |
| MS.gene58107.t1 | AT3G16720 | 36.697 | 109 | 62 | 4 | 110 | 214 | 90 | 195 | 9.43e-18 | 80.5 |
| MS.gene58107.t1 | AT2G46494 | 31.387 | 137 | 89 | 2 | 52 | 183 | 222 | 358 | 1.29e-17 | 80.9 |
| MS.gene58107.t1 | AT2G20030 | 48.571 | 70 | 35 | 1 | 114 | 183 | 98 | 166 | 1.39e-17 | 80.9 |
| MS.gene58107.t1 | AT4G17905 | 34.783 | 138 | 73 | 4 | 61 | 183 | 62 | 197 | 1.56e-17 | 80.1 |
| MS.gene58107.t1 | AT2G35000 | 34.074 | 135 | 82 | 4 | 58 | 187 | 49 | 181 | 1.64e-17 | 80.5 |
| MS.gene58107.t1 | AT4G09110 | 34.426 | 122 | 71 | 3 | 64 | 183 | 51 | 165 | 1.84e-17 | 79.7 |
| MS.gene58107.t1 | AT1G22500 | 32.374 | 139 | 89 | 2 | 53 | 189 | 31 | 166 | 1.86e-17 | 80.5 |
| MS.gene58107.t1 | AT1G35330 | 33.077 | 130 | 79 | 4 | 64 | 186 | 46 | 174 | 1.88e-17 | 80.1 |
| MS.gene58107.t1 | AT4G17905 | 34.783 | 138 | 73 | 4 | 61 | 183 | 88 | 223 | 2.06e-17 | 80.1 |
| MS.gene58107.t1 | AT3G14320 | 47.887 | 71 | 35 | 1 | 114 | 184 | 63 | 131 | 2.43e-17 | 77.8 |
| MS.gene58107.t1 | AT4G15975 | 38.462 | 91 | 54 | 1 | 96 | 186 | 33 | 121 | 2.59e-17 | 78.2 |
| MS.gene58107.t1 | AT4G17920 | 31.818 | 132 | 84 | 3 | 61 | 186 | 24 | 155 | 6.57e-17 | 78.2 |
| MS.gene58107.t1 | AT5G27420 | 45.000 | 80 | 42 | 1 | 111 | 188 | 92 | 171 | 6.59e-17 | 79.0 |
| MS.gene58107.t1 | AT4G09130 | 46.154 | 78 | 40 | 1 | 111 | 186 | 88 | 165 | 8.42e-17 | 78.6 |
| MS.gene58107.t1 | AT4G28890 | 45.714 | 70 | 37 | 1 | 114 | 183 | 97 | 165 | 1.19e-16 | 78.6 |
| MS.gene58107.t1 | AT5G57750 | 29.365 | 126 | 87 | 1 | 61 | 184 | 40 | 165 | 1.29e-16 | 75.9 |
| MS.gene58107.t1 | AT5G05810 | 45.833 | 72 | 38 | 1 | 112 | 183 | 118 | 188 | 1.49e-16 | 78.2 |
| MS.gene58107.t1 | AT2G18650 | 43.590 | 78 | 44 | 0 | 110 | 187 | 95 | 172 | 1.69e-16 | 77.8 |
| MS.gene58107.t1 | AT1G04360 | 31.061 | 132 | 82 | 2 | 61 | 183 | 45 | 176 | 1.84e-16 | 77.8 |
| MS.gene58107.t1 | AT3G03550 | 62.500 | 48 | 18 | 0 | 140 | 187 | 158 | 205 | 2.48e-16 | 77.0 |
| MS.gene58107.t1 | AT4G30400 | 41.333 | 75 | 44 | 0 | 109 | 183 | 102 | 176 | 2.98e-16 | 77.4 |
| MS.gene58107.t1 | AT1G74410 | 36.634 | 101 | 56 | 2 | 86 | 186 | 129 | 221 | 3.11e-16 | 75.1 |
| MS.gene58107.t1 | AT4G10160 | 29.825 | 171 | 98 | 4 | 63 | 216 | 24 | 189 | 3.12e-16 | 75.1 |
| MS.gene58107.t1 | AT1G28040 | 36.449 | 107 | 60 | 3 | 85 | 183 | 189 | 295 | 3.81e-16 | 75.9 |
| MS.gene58107.t1 | AT3G62690 | 30.270 | 185 | 114 | 4 | 37 | 216 | 7 | 181 | 4.96e-16 | 75.1 |
| MS.gene58107.t1 | AT5G17600 | 46.575 | 73 | 36 | 2 | 112 | 183 | 114 | 184 | 5.95e-16 | 76.3 |
| MS.gene58107.t1 | AT2G25410 | 31.765 | 170 | 105 | 5 | 18 | 183 | 207 | 369 | 7.51e-16 | 75.9 |
| MS.gene58107.t1 | AT3G19140 | 37.273 | 110 | 64 | 2 | 80 | 189 | 23 | 127 | 1.04e-15 | 71.6 |
| MS.gene58107.t1 | AT4G09100 | 39.241 | 79 | 46 | 2 | 107 | 183 | 49 | 127 | 1.15e-15 | 71.2 |
| MS.gene58107.t1 | AT2G34990 | 32.394 | 142 | 84 | 6 | 58 | 194 | 34 | 168 | 1.33e-15 | 74.7 |
| MS.gene58107.t1 | AT2G34990 | 32.394 | 142 | 84 | 6 | 58 | 194 | 12 | 146 | 1.42e-15 | 74.3 |
| MS.gene58107.t1 | AT5G43420 | 30.556 | 144 | 78 | 3 | 61 | 183 | 38 | 180 | 1.65e-15 | 75.1 |
| MS.gene58107.t1 | AT5G06490 | 28.659 | 164 | 102 | 3 | 35 | 183 | 8 | 171 | 2.49e-15 | 72.0 |
| MS.gene58107.t1 | AT2G47560 | 34.752 | 141 | 85 | 3 | 44 | 183 | 16 | 150 | 3.15e-15 | 72.4 |
| MS.gene58107.t1 | AT5G66070 | 36.275 | 102 | 57 | 3 | 90 | 186 | 147 | 245 | 5.01e-15 | 72.0 |
| MS.gene58107.t1 | AT5G66070 | 42.105 | 76 | 41 | 2 | 111 | 186 | 149 | 221 | 5.57e-15 | 71.6 |
| MS.gene58107.t1 | AT5G66070 | 42.105 | 76 | 41 | 2 | 111 | 186 | 149 | 221 | 5.57e-15 | 71.6 |
| MS.gene58107.t1 | AT2G27940 | 36.842 | 76 | 46 | 1 | 108 | 183 | 109 | 182 | 6.51e-15 | 71.6 |
| MS.gene58107.t1 | AT1G32361 | 37.500 | 104 | 60 | 3 | 83 | 186 | 101 | 199 | 8.09e-15 | 72.8 |
| MS.gene58107.t1 | AT1G72220 | 28.889 | 135 | 86 | 3 | 64 | 189 | 92 | 225 | 8.60e-15 | 73.2 |
| MS.gene58107.t1 | AT2G46493 | 40.000 | 75 | 44 | 1 | 110 | 183 | 106 | 180 | 1.39e-14 | 69.7 |
| MS.gene58107.t1 | AT3G48030 | 37.778 | 90 | 44 | 3 | 106 | 186 | 88 | 174 | 2.76e-14 | 70.5 |
| MS.gene58107.t1 | AT4G10150 | 36.145 | 83 | 51 | 1 | 105 | 187 | 77 | 157 | 2.78e-14 | 70.1 |
| MS.gene58107.t1 | AT5G42200 | 39.189 | 74 | 44 | 1 | 110 | 183 | 74 | 146 | 3.01e-14 | 68.6 |
| MS.gene58107.t1 | AT3G48030 | 37.778 | 90 | 44 | 3 | 106 | 186 | 166 | 252 | 4.02e-14 | 70.9 |
| MS.gene58107.t1 | AT2G46495 | 40.789 | 76 | 43 | 1 | 110 | 183 | 287 | 362 | 4.80e-14 | 70.9 |
| MS.gene58107.t1 | AT2G46495 | 40.789 | 76 | 43 | 1 | 110 | 183 | 259 | 334 | 4.85e-14 | 70.5 |
| MS.gene58107.t1 | AT5G53110 | 34.146 | 123 | 73 | 4 | 62 | 183 | 257 | 372 | 5.27e-14 | 70.5 |
| MS.gene58107.t1 | AT4G33565 | 55.102 | 49 | 22 | 0 | 140 | 188 | 216 | 264 | 7.84e-14 | 70.1 |
| MS.gene58107.t1 | AT5G10380 | 38.272 | 81 | 49 | 1 | 109 | 189 | 104 | 183 | 1.07e-13 | 69.3 |
| MS.gene58107.t1 | AT2G35910 | 41.429 | 70 | 40 | 1 | 114 | 183 | 121 | 189 | 1.19e-13 | 67.8 |
| MS.gene58107.t1 | AT2G46160 | 37.662 | 77 | 41 | 1 | 114 | 183 | 104 | 180 | 1.32e-13 | 67.8 |
| MS.gene58107.t1 | AT2G46160 | 37.662 | 77 | 41 | 1 | 114 | 183 | 104 | 180 | 1.32e-13 | 67.8 |
| MS.gene58107.t1 | AT1G35630 | 37.755 | 98 | 59 | 2 | 117 | 213 | 209 | 305 | 1.35e-13 | 68.9 |
| MS.gene58107.t1 | AT1G33480 | 32.432 | 111 | 70 | 3 | 105 | 214 | 66 | 172 | 1.43e-13 | 68.6 |
| MS.gene58107.t1 | AT5G58580 | 40.789 | 76 | 45 | 0 | 112 | 187 | 109 | 184 | 1.46e-13 | 68.9 |
| MS.gene58107.t1 | AT5G07040 | 25.658 | 152 | 96 | 3 | 33 | 183 | 1 | 136 | 1.52e-13 | 66.6 |
| MS.gene58107.t1 | AT3G18930 | 38.554 | 83 | 42 | 2 | 114 | 187 | 120 | 202 | 1.52e-13 | 69.3 |
| MS.gene58107.t1 | AT3G18930 | 38.554 | 83 | 42 | 2 | 114 | 187 | 120 | 202 | 1.52e-13 | 69.3 |
| MS.gene58107.t1 | AT3G18930 | 38.554 | 83 | 42 | 2 | 114 | 187 | 120 | 202 | 1.52e-13 | 69.3 |
| MS.gene58107.t1 | AT2G35420 | 40.278 | 72 | 42 | 1 | 112 | 183 | 75 | 145 | 1.56e-13 | 68.2 |
| MS.gene58107.t1 | AT5G40250 | 26.897 | 145 | 88 | 3 | 61 | 187 | 45 | 189 | 1.79e-13 | 68.9 |
| MS.gene58107.t1 | AT1G35625 | 27.517 | 149 | 101 | 3 | 66 | 213 | 163 | 305 | 1.81e-13 | 68.6 |
| MS.gene58107.t1 | AT2G34000 | 32.520 | 123 | 78 | 2 | 67 | 184 | 12 | 134 | 2.15e-13 | 65.9 |
| MS.gene58107.t1 | AT4G35840 | 38.667 | 75 | 44 | 1 | 112 | 184 | 160 | 234 | 2.66e-13 | 67.4 |
| MS.gene58107.t1 | AT2G17730 | 29.091 | 110 | 69 | 2 | 77 | 184 | 137 | 239 | 3.86e-13 | 67.0 |
| MS.gene58107.t1 | AT5G46650 | 28.889 | 135 | 87 | 3 | 61 | 186 | 26 | 160 | 4.25e-13 | 67.4 |
| MS.gene58107.t1 | AT2G42360 | 29.167 | 144 | 97 | 2 | 41 | 183 | 11 | 150 | 6.10e-13 | 66.2 |
| MS.gene58107.t1 | AT3G61550 | 31.132 | 106 | 58 | 2 | 88 | 183 | 78 | 178 | 1.00e-12 | 65.5 |
| MS.gene58107.t1 | AT2G18670 | 34.667 | 75 | 49 | 0 | 109 | 183 | 78 | 152 | 2.21e-12 | 63.9 |
| MS.gene58107.t1 | AT4G26400 | 45.588 | 68 | 29 | 2 | 116 | 183 | 223 | 282 | 2.26e-12 | 65.9 |
| MS.gene58107.t1 | AT4G26400 | 45.588 | 68 | 29 | 2 | 116 | 183 | 223 | 282 | 2.26e-12 | 65.9 |
| MS.gene58107.t1 | AT3G11110 | 37.349 | 83 | 52 | 0 | 101 | 183 | 67 | 149 | 2.44e-12 | 63.2 |
| MS.gene58107.t1 | AT5G36001 | 58.696 | 46 | 19 | 0 | 138 | 183 | 261 | 306 | 3.64e-12 | 65.1 |
| MS.gene58107.t1 | AT2G37580 | 37.179 | 78 | 44 | 1 | 106 | 183 | 112 | 184 | 3.80e-12 | 63.9 |
| MS.gene58107.t1 | AT5G52150 | 37.755 | 98 | 51 | 4 | 86 | 176 | 104 | 198 | 2.46e-11 | 61.2 |
| MS.gene58107.t1 | AT1G53010 | 51.111 | 45 | 22 | 0 | 140 | 184 | 129 | 173 | 3.01e-11 | 60.5 |
| MS.gene58107.t1 | AT2G42350 | 38.028 | 71 | 42 | 1 | 113 | 183 | 74 | 142 | 3.22e-11 | 61.2 |
| MS.gene58107.t1 | AT3G20395 | 35.165 | 91 | 56 | 1 | 96 | 186 | 129 | 216 | 3.50e-11 | 61.2 |
| MS.gene58107.t1 | AT1G22670 | 36.111 | 72 | 44 | 2 | 114 | 184 | 205 | 275 | 4.46e-11 | 62.0 |
| MS.gene58107.t1 | AT4G09560 | 40.845 | 71 | 40 | 2 | 115 | 184 | 208 | 277 | 7.02e-11 | 61.6 |
| MS.gene58107.t1 | AT1G71980 | 36.111 | 72 | 44 | 2 | 114 | 184 | 205 | 275 | 8.47e-11 | 61.2 |
Find 46 sgRNAs with CRISPR-Local
Find 47 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AATTCAACAGACTCAAATTT+TGG | 0.170429 | 4.2:-9464233 | MS.gene58107:CDS |
| TGAAATCCATGGTTGCATTT+AGG | 0.236983 | 4.2:+9463897 | None:intergenic |
| TTGCATTAAACTCCATTATA+AGG | 0.292690 | 4.2:-9464142 | MS.gene58107:CDS |
| ACCACTAGAACCTGAAGATT+TGG | 0.300487 | 4.2:-9463730 | MS.gene58107:CDS |
| CATTATAAGGTGTGCCTTAA+GGG | 0.301317 | 4.2:-9464129 | MS.gene58107:CDS |
| TGAATCGTTATAATAGTTTC+TGG | 0.311667 | 4.2:+9463753 | None:intergenic |
| CGAAGAGTCGTTGTTGTTGA+TGG | 0.313102 | 4.2:+9464094 | None:intergenic |
| CCATTATAAGGTGTGCCTTA+AGG | 0.325361 | 4.2:-9464130 | MS.gene58107:CDS |
| AGCAAATAAAAGCACATAAT+AGG | 0.335356 | 4.2:+9464168 | None:intergenic |
| TAGTTACGCTCCAAATCTTC+AGG | 0.356200 | 4.2:+9463720 | None:intergenic |
| CTTGAAATTTGTCGGAAGAT+TGG | 0.358957 | 4.2:-9463810 | MS.gene58107:CDS |
| CCTTAAGGCACACCTTATAA+TGG | 0.373664 | 4.2:+9464130 | None:intergenic |
| AAGATTTGGAGCGTAACTAT+AGG | 0.385286 | 4.2:-9463716 | MS.gene58107:CDS |
| CAACAACAATTCACCTCAAT+TGG | 0.398418 | 4.2:-9464060 | MS.gene58107:CDS |
| TCTGGCACTGGCAACACAAT+TGG | 0.406141 | 4.2:+9463771 | None:intergenic |
| GTTGGTGATTGATAATCAAT+TGG | 0.420758 | 4.2:+9464284 | None:intergenic |
| AATGCCTTCTTGAAATTTGT+CGG | 0.426596 | 4.2:-9463818 | MS.gene58107:CDS |
| ATGTTCGTTGCATTGACAAA+TGG | 0.437642 | 4.2:-9463875 | MS.gene58107:CDS |
| AGATTTGGAGCGTAACTATA+GGG | 0.450405 | 4.2:-9463715 | MS.gene58107:CDS |
| ACAAGAAGCTCATGGAGAAA+TGG | 0.473383 | 4.2:+9464341 | None:intergenic |
| GTTATAATAGTTTCTGGCAC+TGG | 0.477505 | 4.2:+9463759 | None:intergenic |
| CAGCTGAATAACTCACTGTT+GGG | 0.480794 | 4.2:+9464000 | None:intergenic |
| GTTTGTTAACACAGGGGAGC+TGG | 0.485159 | 4.2:+9464262 | None:intergenic |
| ATTCCTTTGTTGACCAATTG+AGG | 0.485311 | 4.2:+9464047 | None:intergenic |
| TTGCATTGACAAATGGCTAA+AGG | 0.492896 | 4.2:-9463868 | MS.gene58107:CDS |
| TCGGAAGATTGGTGGGTCGC+AGG | 0.493747 | 4.2:-9463799 | MS.gene58107:CDS |
| AAGAAGGCATTGTCTACACT+TGG | 0.501939 | 4.2:+9463830 | None:intergenic |
| GGCTACGTTTGAAACCCTTA+AGG | 0.504858 | 4.2:+9464115 | None:intergenic |
| GAAATTTGTCGGAAGATTGG+TGG | 0.527071 | 4.2:-9463807 | MS.gene58107:CDS |
| ATGGAGAAATGGTGAAGTAA+AGG | 0.527824 | 4.2:+9464352 | None:intergenic |
| TCAGCTGAATAACTCACTGT+TGG | 0.529659 | 4.2:+9463999 | None:intergenic |
| AAATTTGTCGGAAGATTGGT+GGG | 0.562759 | 4.2:-9463806 | MS.gene58107:CDS |
| TTGTCGAATCTCGCACAAGA+AGG | 0.564290 | 4.2:-9464322 | MS.gene58107:CDS |
| TCTTCCGACAAATTTCAAGA+AGG | 0.564965 | 4.2:+9463814 | None:intergenic |
| TTGTGATTGTTTGTTAACAC+AGG | 0.572000 | 4.2:+9464254 | None:intergenic |
| TGTCTCTCAGAGTTCACAAA+GGG | 0.586259 | 4.2:-9463939 | MS.gene58107:CDS |
| TCCAAATCTTCAGGTTCTAG+TGG | 0.587103 | 4.2:+9463729 | None:intergenic |
| TGTGATTGTTTGTTAACACA+GGG | 0.607685 | 4.2:+9464255 | None:intergenic |
| ATACACTCTATATCTAGACT+TGG | 0.610683 | 4.2:+9463966 | None:intergenic |
| TCACCTCAATTGGTCAACAA+AGG | 0.615305 | 4.2:-9464050 | MS.gene58107:CDS |
| GAGATTCGACAAGAAGCTCA+TGG | 0.622395 | 4.2:+9464333 | None:intergenic |
| GTTAACACAGGGGAGCTGGT+TGG | 0.624144 | 4.2:+9464266 | None:intergenic |
| TGCAACGAACATGAAATCCA+TGG | 0.629921 | 4.2:+9463886 | None:intergenic |
| AGAAGGCATTGTCTACACTT+GGG | 0.633040 | 4.2:+9463831 | None:intergenic |
| ATGTCTCTCAGAGTTCACAA+AGG | 0.686490 | 4.2:-9463940 | MS.gene58107:CDS |
| GTGATTGTTTGTTAACACAG+GGG | 0.719628 | 4.2:+9464256 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| ! | TGAATCGTTATAATAGTTTC+TGG | + | chr4.2:9464325-9464344 | None:intergenic | 25.0% |
| ! | TTGCATTAAACTCCATTATA+AGG | - | chr4.2:9463933-9463952 | MS.gene58107:CDS | 25.0% |
| !! | AATTCAACAGACTCAAATTT+TGG | - | chr4.2:9463842-9463861 | MS.gene58107:CDS | 25.0% |
| !! | AGCAAATAAAAGCACATAAT+AGG | + | chr4.2:9463910-9463929 | None:intergenic | 25.0% |
| AATGCCTTCTTGAAATTTGT+CGG | - | chr4.2:9464257-9464276 | MS.gene58107:CDS | 30.0% | |
| ATACACTCTATATCTAGACT+TGG | + | chr4.2:9464112-9464131 | None:intergenic | 30.0% | |
| ! | ATTTTACCTAAATGCAACCA+TGG | - | chr4.2:9464172-9464191 | MS.gene58107:CDS | 30.0% |
| ! | TGTGATTGTTTGTTAACACA+GGG | + | chr4.2:9463823-9463842 | None:intergenic | 30.0% |
| ! | TTGTGATTGTTTGTTAACAC+AGG | + | chr4.2:9463824-9463843 | None:intergenic | 30.0% |
| !! | GTTGGTGATTGATAATCAAT+TGG | + | chr4.2:9463794-9463813 | None:intergenic | 30.0% |
| AAATTTGTCGGAAGATTGGT+GGG | - | chr4.2:9464269-9464288 | MS.gene58107:CDS | 35.0% | |
| ATGGAGAAATGGTGAAGTAA+AGG | + | chr4.2:9463726-9463745 | None:intergenic | 35.0% | |
| ATTCCTTTGTTGACCAATTG+AGG | + | chr4.2:9464031-9464050 | None:intergenic | 35.0% | |
| CAACAACAATTCACCTCAAT+TGG | - | chr4.2:9464015-9464034 | MS.gene58107:CDS | 35.0% | |
| CATTATAAGGTGTGCCTTAA+GGG | - | chr4.2:9463946-9463965 | MS.gene58107:CDS | 35.0% | |
| CTTGAAATTTGTCGGAAGAT+TGG | - | chr4.2:9464265-9464284 | MS.gene58107:CDS | 35.0% | |
| TCTTCCGACAAATTTCAAGA+AGG | + | chr4.2:9464264-9464283 | None:intergenic | 35.0% | |
| TGAAATCCATGGTTGCATTT+AGG | + | chr4.2:9464181-9464200 | None:intergenic | 35.0% | |
| ! | AAGATTTGGAGCGTAACTAT+AGG | - | chr4.2:9464359-9464378 | MS.gene58107:CDS | 35.0% |
| ! | AGATTTGGAGCGTAACTATA+GGG | - | chr4.2:9464360-9464379 | MS.gene58107:CDS | 35.0% |
| ! | ATGTTCGTTGCATTGACAAA+TGG | - | chr4.2:9464200-9464219 | MS.gene58107:CDS | 35.0% |
| ! | GTGATTGTTTGTTAACACAG+GGG | + | chr4.2:9463822-9463841 | None:intergenic | 35.0% |
| ! | TTGCATTGACAAATGGCTAA+AGG | - | chr4.2:9464207-9464226 | MS.gene58107:CDS | 35.0% |
| !! | GTTATAATAGTTTCTGGCAC+TGG | + | chr4.2:9464319-9464338 | None:intergenic | 35.0% |
| ACAAGAAGCTCATGGAGAAA+TGG | + | chr4.2:9463737-9463756 | None:intergenic | 40.0% | |
| ACCACTAGAACCTGAAGATT+TGG | - | chr4.2:9464345-9464364 | MS.gene58107:CDS | 40.0% | |
| ATGTCTCTCAGAGTTCACAA+AGG | - | chr4.2:9464135-9464154 | MS.gene58107:CDS | 40.0% | |
| CAGCTGAATAACTCACTGTT+GGG | + | chr4.2:9464078-9464097 | None:intergenic | 40.0% | |
| CCATTATAAGGTGTGCCTTA+AGG | - | chr4.2:9463945-9463964 | MS.gene58107:CDS | 40.0% | |
| CCTTAAGGCACACCTTATAA+TGG | + | chr4.2:9463948-9463967 | None:intergenic | 40.0% | |
| GAAATTTGTCGGAAGATTGG+TGG | - | chr4.2:9464268-9464287 | MS.gene58107:CDS | 40.0% | |
| TAGTTACGCTCCAAATCTTC+AGG | + | chr4.2:9464358-9464377 | None:intergenic | 40.0% | |
| TCACCTCAATTGGTCAACAA+AGG | - | chr4.2:9464025-9464044 | MS.gene58107:CDS | 40.0% | |
| TCAGCTGAATAACTCACTGT+TGG | + | chr4.2:9464079-9464098 | None:intergenic | 40.0% | |
| TGCAACGAACATGAAATCCA+TGG | + | chr4.2:9464192-9464211 | None:intergenic | 40.0% | |
| TGTCTCTCAGAGTTCACAAA+GGG | - | chr4.2:9464136-9464155 | MS.gene58107:CDS | 40.0% | |
| ! | TCCAAATCTTCAGGTTCTAG+TGG | + | chr4.2:9464349-9464368 | None:intergenic | 40.0% |
| !! | AAGAAGGCATTGTCTACACT+TGG | + | chr4.2:9464248-9464267 | None:intergenic | 40.0% |
| !! | AGAAGGCATTGTCTACACTT+GGG | + | chr4.2:9464247-9464266 | None:intergenic | 40.0% |
| GAGATTCGACAAGAAGCTCA+TGG | + | chr4.2:9463745-9463764 | None:intergenic | 45.0% | |
| TTGTCGAATCTCGCACAAGA+AGG | - | chr4.2:9463753-9463772 | MS.gene58107:CDS | 45.0% | |
| ! | CGAAGAGTCGTTGTTGTTGA+TGG | + | chr4.2:9463984-9464003 | None:intergenic | 45.0% |
| ! | GGCTACGTTTGAAACCCTTA+AGG | + | chr4.2:9463963-9463982 | None:intergenic | 45.0% |
| ! | GTTTGTTAACACAGGGGAGC+TGG | + | chr4.2:9463816-9463835 | None:intergenic | 50.0% |
| !! | TCTGGCACTGGCAACACAAT+TGG | + | chr4.2:9464307-9464326 | None:intergenic | 50.0% |
| GTTAACACAGGGGAGCTGGT+TGG | + | chr4.2:9463812-9463831 | None:intergenic | 55.0% | |
| ! | TCGGAAGATTGGTGGGTCGC+AGG | - | chr4.2:9464276-9464295 | MS.gene58107:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.2 | gene | 9463707 | 9464390 | 9463707 | ID=MS.gene58107 |
| chr4.2 | mRNA | 9463707 | 9464390 | 9463707 | ID=MS.gene58107.t1;Parent=MS.gene58107 |
| chr4.2 | exon | 9463707 | 9464390 | 9463707 | ID=MS.gene58107.t1.exon1;Parent=MS.gene58107.t1 |
| chr4.2 | CDS | 9463707 | 9464390 | 9463707 | ID=cds.MS.gene58107.t1;Parent=MS.gene58107.t1 |
| Gene Sequence |
| Protein sequence |
