AlfalfaGEDB | MS.gene030658

M. sativa cultivar XinJiangDaYe / MS.gene030658

KEGG: K19040
GO: -
PFAM: PF13639.9

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene030658.t1	XP_003630207.1	61.7	227	17	2	1	167	1	217	1.10E-64	256.1

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene030658.t1	Q6NML0	57.4	148	55	4	23	166	80	223	3.4e-38	159.5

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene030658.t1	G7LD44	61.7	227	17	2	1	167	1	217	7.9e-65	256.1

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR

PPI:

Gene1	Gene2	Type
MS.gene030658	MS.gene030654	PPI
MS.gene030658	MS.gene030653	PPI
MS.gene030658	MS.gene70253	PPI
MS.gene030658	MS.gene58110	PPI
MS.gene030658	MS.gene28431	PPI
MS.gene030658	MS.gene030656	PPI
MS.gene030658	MS.gene58104	PPI
MS.gene030658	MS.gene70257	PPI
MS.gene030658	MS.gene58105	PPI
MS.gene030658	MS.gene030657	PPI
MS.gene030658	MS.gene70255	PPI
MS.gene030658	MS.gene049319	PPI
MS.gene030658	MS.gene58107	PPI
MS.gene030658	MS.gene58106	PPI
MS.gene030658	MS.gene013346	PPI
MS.gene70256	MS.gene030658	PPI
MS.gene030658	MS.gene06444	PPI
MS.gene030658	MS.gene58111	PPI
MS.gene030658	MS.gene28424	PPI
MS.gene030658	MS.gene76770	PPI
MS.gene58111	MS.gene030658	PPI
MS.gene030658	MS.gene030659	PPI
MS.gene030658	MS.gene28426	PPI
MS.gene030658	MS.gene94889	PPI
MS.gene030658	MS.gene28429	PPI
MS.gene030658	MS.gene70249	PPI
MS.gene030658	MS.gene28425	PPI
MS.gene030658	MS.gene88015	PPI
MS.gene030658	MS.gene70250	PPI
MS.gene049319	MS.gene030658	PPI
MS.gene030658	MS.gene48772	PPI
MS.gene030658	MS.gene030651	PPI
MS.gene030658	MS.gene70256	PPI
MS.gene030658	MS.gene030655	PPI
MS.gene030658	MS.gene31002	PPI
MS.gene030658	MS.gene030652	PPI
MS.gene030658	MS.gene70254	PPI
MS.gene030658	MS.gene28428	PPI
MS.gene030658	MS.gene030660	PPI
MS.gene030658	MS.gene28430	PPI
MS.gene030658	MS.gene28427	PPI
MS.gene030658	MS.gene58108	PPI
MS.gene030658	MS.gene58109	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene030658.t1	MTR_8g092960	62.212	217	29	4	1	166	1	215	6.96e-79	233
MS.gene030658.t1	MTR_8g092970	84.138	145	13	1	23	167	83	217	8.95e-79	233
MS.gene030658.t1	MTR_8g092930	86.897	145	17	1	23	167	83	225	2.14e-78	233
MS.gene030658.t1	MTR_8g093010	78.621	145	21	2	23	167	85	219	2.41e-77	229
MS.gene030658.t1	MTR_8g092840	83.333	144	23	1	23	166	83	225	1.43e-76	228
MS.gene030658.t1	MTR_8g092985	58.095	210	31	2	1	153	1	210	9.50e-74	220
MS.gene030658.t1	MTR_8g092990	84.138	145	22	1	23	167	84	227	2.01e-69	210
MS.gene030658.t1	MTR_3g095560	68.667	150	39	3	23	167	81	227	6.98e-69	209
MS.gene030658.t1	MTR_3g094000	48.305	118	52	3	23	138	66	176	3.40e-30	108
MS.gene030658.t1	MTR_5g024730	47.826	115	51	4	42	147	63	177	2.88e-28	104
MS.gene030658.t1	MTR_8g073120	48.454	97	44	3	42	134	58	152	1.89e-27	102
MS.gene030658.t1	MTR_3g116000	54.118	85	36	2	52	135	77	159	3.65e-27	101
MS.gene030658.t1	MTR_7g073200	60.000	75	27	2	54	127	81	153	2.98e-25	95.9
MS.gene030658.t1	MTR_4g094725	53.165	79	36	1	47	124	71	149	6.74e-24	91.7
MS.gene030658.t1	MTR_2g035800	54.795	73	32	1	52	124	74	145	7.75e-24	91.7
MS.gene030658.t1	MTR_3g110190	41.837	98	55	2	33	129	44	140	6.83e-21	87.8
MS.gene030658.t1	MTR_1g100737	48.193	83	39	1	52	130	90	172	1.03e-20	84.7
MS.gene030658.t1	MTR_6g055030	45.161	93	48	2	42	131	85	177	1.19e-20	86.7
MS.gene030658.t1	MTR_8g023400	45.570	79	40	2	54	131	92	168	7.63e-20	84.7
MS.gene030658.t1	MTR_4g120270	44.737	76	35	2	50	123	76	146	1.02e-19	83.6
MS.gene030658.t1	MTR_1g082550	35.772	123	72	3	7	127	56	173	3.12e-19	83.6
MS.gene030658.t1	MTR_4g056590	42.222	90	45	3	50	139	96	178	3.60e-19	80.5
MS.gene030658.t1	MTR_7g117540	46.667	75	38	1	55	129	77	149	5.17e-19	82.0
MS.gene030658.t1	MTR_3g099650	43.590	78	42	1	52	127	105	182	2.63e-18	80.9
MS.gene030658.t1	MTR_5g082940	46.154	78	41	1	50	126	71	148	4.08e-18	77.0
MS.gene030658.t1	MTR_6g087150	50.704	71	34	1	54	124	93	162	4.65e-18	80.1
MS.gene030658.t1	MTR_3g464780	42.353	85	46	1	46	127	94	178	5.10e-18	78.6
MS.gene030658.t1	MTR_7g113800	37.000	100	55	3	49	141	86	184	5.51e-18	79.7
MS.gene030658.t1	MTR_4g063070	44.578	83	41	2	44	123	298	378	5.51e-18	80.1
MS.gene030658.t1	MTR_7g116220	40.000	80	46	1	51	128	67	146	5.62e-18	77.0
MS.gene030658.t1	MTR_5g071930	44.681	94	46	3	53	146	65	152	6.02e-18	77.4
MS.gene030658.t1	MTR_2g096350	61.702	47	18	0	77	123	131	177	9.40e-18	77.4
MS.gene030658.t1	MTR_7g076250	36.134	119	66	3	46	163	55	164	1.06e-17	76.6
MS.gene030658.t1	MTR_1g043410	33.929	112	68	2	47	156	87	194	1.61e-17	78.2
MS.gene030658.t1	MTR_2g436100	40.000	80	47	1	44	123	83	161	1.65e-17	77.8
MS.gene030658.t1	MTR_5g064990	34.783	115	70	3	52	161	112	226	2.09e-17	78.6
MS.gene030658.t1	MTR_4g129420	43.421	76	43	0	52	127	115	190	2.42e-17	78.6
MS.gene030658.t1	MTR_5g064980	42.045	88	44	2	41	126	100	182	2.91e-17	78.2
MS.gene030658.t1	MTR_3g071300	39.130	92	53	1	38	126	60	151	3.16e-17	75.1
MS.gene030658.t1	MTR_4g093830	33.333	108	61	2	54	161	126	222	5.25e-17	77.0
MS.gene030658.t1	MTR_3g078450	36.036	111	68	2	32	141	54	162	5.67e-17	75.1
MS.gene030658.t1	MTR_5g066250	32.090	134	73	3	34	162	109	229	1.25e-16	76.3
MS.gene030658.t1	MTR_5g030010	37.634	93	55	2	54	146	122	211	1.29e-16	76.3
MS.gene030658.t1	MTR_3g100400	43.056	72	40	1	52	123	128	198	1.77e-16	75.9
MS.gene030658.t1	MTR_8g089880	37.500	80	49	1	54	133	127	205	1.97e-16	74.7
MS.gene030658.t1	MTR_1g492830	38.158	76	47	0	53	128	60	135	2.26e-16	73.9
MS.gene030658.t1	MTR_5g026730	34.579	107	65	3	46	148	55	160	3.13e-16	72.4
MS.gene030658.t1	MTR_8g066780	35.345	116	72	2	34	146	92	207	3.45e-16	74.7
MS.gene030658.t1	MTR_2g055790	38.889	90	51	1	38	127	61	146	3.60e-16	72.8
MS.gene030658.t1	MTR_3g078470	36.000	100	61	2	28	126	52	149	4.75e-16	72.8
MS.gene030658.t1	MTR_7g116180	39.474	76	44	1	53	126	66	141	5.79e-16	71.6
MS.gene030658.t1	MTR_4g030070	33.708	89	57	1	43	131	74	160	7.32e-16	72.4
MS.gene030658.t1	MTR_7g108855	36.957	92	49	2	55	137	67	158	7.57e-16	71.6
MS.gene030658.t1	MTR_2g009310	60.000	45	18	0	79	123	159	203	9.18e-16	73.9
MS.gene030658.t1	MTR_1g070425	39.474	76	44	1	53	126	67	142	9.99e-16	71.2
MS.gene030658.t1	MTR_1g056350	34.000	100	62	2	46	142	66	164	1.51e-15	70.5
MS.gene030658.t1	MTR_5g064890	53.061	49	23	0	79	127	152	200	1.65e-15	72.8
MS.gene030658.t1	MTR_3g114500	40.964	83	44	3	42	123	35	113	2.17e-15	68.9
MS.gene030658.t1	MTR_3g091620	38.202	89	54	1	39	127	86	173	2.33e-15	72.4
MS.gene030658.t1	MTR_4g108830	37.383	107	48	2	26	124	122	217	3.95e-15	70.5
MS.gene030658.t1	MTR_2g090905	41.558	77	40	1	52	123	37	113	5.07e-15	68.2
MS.gene030658.t1	MTR_8g032690	40.580	69	38	1	81	149	19	84	5.70e-15	67.4
MS.gene030658.t1	MTR_2g090950	39.744	78	42	1	51	123	88	165	5.76e-15	70.1
MS.gene030658.t1	MTR_5g009210	39.506	81	48	1	44	123	277	357	6.50e-15	71.2
MS.gene030658.t1	MTR_5g034790	40.000	75	44	1	52	126	114	187	7.44e-15	71.2
MS.gene030658.t1	MTR_4g108830	34.783	115	56	2	18	124	86	189	8.51e-15	68.9
MS.gene030658.t1	MTR_3g012550	28.704	108	73	2	17	123	46	150	8.74e-15	68.6
MS.gene030658.t1	MTR_1g070140	37.662	77	48	0	47	123	96	172	9.56e-15	70.9
MS.gene030658.t1	MTR_8g028465	37.333	75	44	1	49	123	85	156	1.08e-14	68.9
MS.gene030658.t1	MTR_3g086700	37.113	97	55	3	33	123	21	117	1.23e-14	68.6
MS.gene030658.t1	MTR_5g009190	38.272	81	49	1	44	123	256	336	1.70e-14	70.1
MS.gene030658.t1	MTR_4g106680	38.889	72	43	1	52	123	104	174	1.89e-14	69.7
MS.gene030658.t1	MTR_7g079280	31.858	113	62	3	54	165	80	178	1.99e-14	67.8
MS.gene030658.t1	MTR_6g007737	38.667	75	45	1	52	126	131	204	2.00e-14	70.1
MS.gene030658.t1	MTR_8g063660	37.662	77	47	1	52	128	66	141	2.22e-14	69.7
MS.gene030658.t1	MTR_3g086730	34.906	106	56	3	45	145	34	131	2.33e-14	68.6
MS.gene030658.t1	MTR_1g074190	36.905	84	44	2	47	123	92	173	2.61e-14	69.7
MS.gene030658.t1	MTR_8g074900	41.333	75	39	1	52	126	156	225	2.77e-14	68.2
MS.gene030658.t1	MTR_2g041200	50.909	55	27	0	69	123	97	151	3.69e-14	67.0
MS.gene030658.t1	MTR_5g092790	43.836	73	38	2	53	123	156	227	4.50e-14	67.8
MS.gene030658.t1	MTR_6g007670	42.254	71	39	1	53	123	7	75	5.97e-14	67.8
MS.gene030658.t1	MTR_6g007670	43.662	71	40	0	53	123	144	214	1.36e-12	63.9
MS.gene030658.t1	MTR_3g091200	39.437	71	42	1	54	123	303	373	7.22e-14	68.6
MS.gene030658.t1	MTR_7g079290	43.103	58	33	0	76	133	150	207	7.40e-14	67.0
MS.gene030658.t1	MTR_5g026720	53.488	43	20	0	81	123	93	135	7.66e-14	65.9
MS.gene030658.t1	MTR_8g099495	40.278	72	42	1	54	124	319	390	7.89e-14	68.6
MS.gene030658.t1	MTR_5g022920	38.158	76	46	1	52	126	159	234	1.48e-13	66.2
MS.gene030658.t1	MTR_7g059360	43.478	69	38	1	57	124	133	201	1.51e-13	66.2
MS.gene030658.t1	MTR_5g009200	37.037	81	50	1	44	123	312	392	1.83e-13	67.4
MS.gene030658.t1	MTR_6g007680	40.845	71	41	1	53	123	39	108	2.07e-13	64.3
MS.gene030658.t1	MTR_8g019710	60.000	45	18	0	79	123	52	96	2.33e-13	63.9
MS.gene030658.t1	MTR_5g092750	57.692	52	21	1	72	123	177	227	4.00e-13	65.1
MS.gene030658.t1	MTR_1g026070	35.616	73	43	1	51	123	45	113	4.28e-13	63.2
MS.gene030658.t1	MTR_3g087900	49.231	65	28	3	64	127	55	115	5.64e-13	63.5
MS.gene030658.t1	MTR_8g071815	53.488	43	20	0	81	123	90	132	7.19e-13	63.5
MS.gene030658.t1	MTR_5g076990	40.230	87	44	2	40	123	67	148	7.97e-13	65.1
MS.gene030658.t1	MTR_3g078120	35.870	92	57	2	34	123	36	127	9.40e-13	62.8
MS.gene030658.t1	MTR_7g116200	38.028	71	42	1	53	123	67	135	1.63e-12	62.4
MS.gene030658.t1	MTR_8g099515	40.789	76	42	2	50	123	305	379	1.78e-12	64.3
MS.gene030658.t1	MTR_8g027745	36.250	80	49	2	46	123	277	356	2.72e-12	63.9
MS.gene030658.t1	MTR_8g072020	47.692	65	32	2	60	123	385	448	2.89e-12	63.9
MS.gene030658.t1	MTR_8g072020	47.692	65	32	2	60	123	424	487	3.48e-12	63.9
MS.gene030658.t1	MTR_7g117350	34.667	75	44	1	54	123	290	364	4.73e-12	63.2
MS.gene030658.t1	MTR_7g117350	34.667	75	44	1	54	123	282	356	5.09e-12	63.2
MS.gene030658.t1	MTR_6g055030	50.000	50	24	1	83	131	97	146	7.12e-12	62.4
MS.gene030658.t1	MTR_2g079320	31.818	110	63	3	25	126	99	204	1.02e-11	60.8
MS.gene030658.t1	MTR_5g096410	37.500	96	45	3	45	126	232	326	1.07e-11	62.0
MS.gene030658.t1	MTR_8g027980	33.333	75	48	1	57	129	93	167	1.16e-11	61.6
MS.gene030658.t1	MTR_5g096410	37.500	96	45	3	45	126	244	338	1.19e-11	62.0
MS.gene030658.t1	MTR_5g096410	37.500	96	45	3	45	126	241	335	1.22e-11	62.0
MS.gene030658.t1	MTR_5g041310	56.818	44	18	1	80	123	114	156	1.85e-11	60.5
MS.gene030658.t1	MTR_4g106960	57.778	45	18	1	79	123	176	219	2.06e-11	61.2
MS.gene030658.t1	MTR_3g081030	31.683	101	65	2	33	133	75	171	2.13e-11	60.1
MS.gene030658.t1	MTR_4g106960	57.778	45	18	1	79	123	176	219	2.24e-11	61.2
MS.gene030658.t1	MTR_7g116210	51.163	43	21	0	81	123	35	77	2.24e-11	58.2
MS.gene030658.t1	MTR_7g096690	32.500	80	51	2	47	123	63	142	2.41e-11	60.8
MS.gene030658.t1	MTR_4g106960	57.778	45	18	1	79	123	233	276	2.48e-11	61.2
MS.gene030658.t1	MTR_8g009190	47.917	48	25	0	80	127	104	151	2.53e-11	60.8
MS.gene030658.t1	MTR_2g044570	40.741	54	32	0	80	133	82	135	2.55e-11	60.8
MS.gene030658.t1	MTR_4g106960	57.778	45	18	1	79	123	233	276	2.72e-11	60.8
MS.gene030658.t1	MTR_5g041330	56.818	44	18	1	80	123	104	146	2.96e-11	59.7
MS.gene030658.t1	MTR_4g022410	46.429	56	30	0	68	123	100	155	3.93e-11	58.9
MS.gene030658.t1	MTR_8g066740	39.189	74	42	1	53	123	75	148	3.94e-11	60.5
MS.gene030658.t1	MTR_3g078540	41.270	63	36	1	68	129	66	128	4.75e-11	58.2
MS.gene030658.t1	MTR_4g102870	44.068	59	32	1	71	129	306	363	8.68e-11	59.7
MS.gene030658.t1	MTR_1g096780	36.111	72	44	2	54	124	208	278	9.61e-11	59.7

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene030658.t1	AT1G49220	61.871	139	45	4	23	157	80	214	2.90e-50	162
MS.gene030658.t1	AT1G49210	62.712	118	41	2	52	166	106	223	4.51e-49	158
MS.gene030658.t1	AT1G49200	56.081	148	57	4	23	166	81	224	1.44e-48	157
MS.gene030658.t1	AT1G49230	53.741	147	59	2	23	165	78	219	1.04e-47	154
MS.gene030658.t1	AT3G18773	53.378	148	62	4	23	166	74	218	1.79e-47	154
MS.gene030658.t1	AT5G05280	53.913	115	41	3	23	137	67	169	8.09e-35	120
MS.gene030658.t1	AT3G10910	49.533	107	51	2	23	127	55	160	8.90e-30	107
MS.gene030658.t1	AT1G20823	45.794	107	55	2	23	127	52	157	3.84e-28	103
MS.gene030658.t1	AT1G76410	50.000	94	45	2	41	132	63	156	7.26e-28	102
MS.gene030658.t1	AT5G01880	45.690	116	50	4	23	137	56	159	7.53e-28	102
MS.gene030658.t1	AT2G17450	43.564	101	47	3	41	134	59	156	1.41e-23	91.7
MS.gene030658.t1	AT5G47610	58.065	62	26	0	62	123	88	149	1.66e-22	88.6
MS.gene030658.t1	AT4G35480	45.918	98	38	3	52	134	70	167	1.61e-21	87.0
MS.gene030658.t1	AT4G40070	38.679	106	62	2	54	156	95	200	3.36e-20	85.5
MS.gene030658.t1	AT3G05200	36.364	132	61	3	41	151	86	215	4.46e-20	85.9
MS.gene030658.t1	AT2G27940	40.230	87	50	1	48	134	109	193	1.54e-19	82.4
MS.gene030658.t1	AT1G72310	48.684	76	37	1	52	127	100	173	2.56e-19	83.2
MS.gene030658.t1	AT1G72200	35.714	140	63	6	20	153	83	201	3.57e-19	83.6
MS.gene030658.t1	AT1G53820	41.758	91	48	3	52	140	93	180	5.30e-19	82.0
MS.gene030658.t1	AT1G74410	33.333	120	79	1	7	126	103	221	5.56e-19	80.9
MS.gene030658.t1	AT3G14320	49.296	71	34	1	54	124	63	131	6.06e-19	80.1
MS.gene030658.t1	AT4G17245	57.377	61	25	1	64	123	85	145	8.75e-19	79.0
MS.gene030658.t1	AT4G15975	33.083	133	73	3	36	166	33	151	5.70e-18	78.2
MS.gene030658.t1	AT4G30400	43.056	72	41	0	52	123	105	176	7.88e-18	80.1
MS.gene030658.t1	AT5G27420	45.122	82	41	2	50	128	91	171	7.96e-18	79.7
MS.gene030658.t1	AT5G57750	41.096	73	43	0	52	124	93	165	1.02e-17	77.0
MS.gene030658.t1	AT3G16720	32.710	107	67	3	51	154	91	195	1.26e-17	78.6
MS.gene030658.t1	AT4G09120	46.053	76	39	1	53	126	93	168	1.92e-17	78.2
MS.gene030658.t1	AT4G09130	44.872	78	41	1	51	126	88	165	2.56e-17	78.2
MS.gene030658.t1	AT2G20030	47.143	70	36	1	54	123	98	166	3.45e-17	77.8
MS.gene030658.t1	AT4G09110	44.737	76	40	1	53	126	93	168	4.05e-17	77.0
MS.gene030658.t1	AT2G18650	43.421	76	43	0	52	127	97	172	4.18e-17	77.8
MS.gene030658.t1	AT4G17905	66.667	45	15	0	79	123	153	197	4.24e-17	77.0
MS.gene030658.t1	AT2G35000	32.824	131	85	2	22	149	73	203	4.27e-17	77.4
MS.gene030658.t1	AT4G17905	66.667	45	15	0	79	123	179	223	4.43e-17	77.4
MS.gene030658.t1	AT1G35330	42.857	77	42	1	52	126	98	174	5.81e-17	77.0
MS.gene030658.t1	AT5G17600	43.056	72	40	1	52	123	114	184	6.14e-17	77.0
MS.gene030658.t1	AT3G03550	59.184	49	20	0	79	127	157	205	6.75e-17	77.0
MS.gene030658.t1	AT1G04360	38.710	93	47	2	41	123	84	176	7.03e-17	77.0
MS.gene030658.t1	AT1G28040	38.776	98	55	2	27	123	202	295	7.68e-17	76.3
MS.gene030658.t1	AT4G09100	40.506	79	45	2	47	123	49	127	1.02e-16	72.8
MS.gene030658.t1	AT1G22500	40.741	81	46	1	49	127	84	164	1.53e-16	75.9
MS.gene030658.t1	AT2G25410	43.678	87	47	1	39	123	283	369	1.94e-16	75.9
MS.gene030658.t1	AT5G66070	37.255	102	56	3	30	126	147	245	2.17e-16	74.3
MS.gene030658.t1	AT4G28890	43.662	71	39	1	54	124	97	166	2.35e-16	75.9
MS.gene030658.t1	AT5G05810	43.056	72	40	1	52	123	118	188	3.50e-16	75.1
MS.gene030658.t1	AT2G46493	37.363	91	53	2	37	123	90	180	4.53e-16	72.0
MS.gene030658.t1	AT2G35420	39.423	104	57	4	52	155	75	172	4.58e-16	73.6
MS.gene030658.t1	AT5G66070	37.778	90	53	2	37	126	135	221	5.76e-16	72.8
MS.gene030658.t1	AT5G66070	37.778	90	53	2	37	126	135	221	5.76e-16	72.8
MS.gene030658.t1	AT3G48030	35.417	96	58	1	35	126	79	174	6.98e-16	73.2
MS.gene030658.t1	AT4G17920	35.714	98	59	2	33	126	58	155	7.78e-16	73.2
MS.gene030658.t1	AT2G35910	37.079	89	55	1	54	142	121	208	9.99e-16	72.0
MS.gene030658.t1	AT3G48030	35.417	96	58	1	35	126	157	252	1.01e-15	73.6
MS.gene030658.t1	AT4G33565	43.662	71	38	1	79	147	215	285	1.01e-15	73.6
MS.gene030658.t1	AT5G10380	40.541	74	43	1	54	127	109	181	1.62e-15	72.4
MS.gene030658.t1	AT1G32361	38.095	105	59	4	22	126	101	199	1.75e-15	72.8
MS.gene030658.t1	AT1G72220	57.778	45	19	0	79	123	175	219	2.01e-15	73.2
MS.gene030658.t1	AT3G19140	35.088	114	69	2	11	124	14	122	3.95e-15	68.6
MS.gene030658.t1	AT5G07040	35.802	81	50	2	46	124	57	137	6.90e-15	68.6
MS.gene030658.t1	AT5G58580	40.789	76	45	0	52	127	109	184	7.81e-15	70.9
MS.gene030658.t1	AT3G62690	35.577	104	55	3	55	156	88	181	8.53e-15	70.1
MS.gene030658.t1	AT1G23980	38.158	76	46	1	52	127	116	190	9.51e-15	70.9
MS.gene030658.t1	AT2G46495	41.250	80	45	1	46	123	255	334	9.82e-15	70.9
MS.gene030658.t1	AT4G10160	31.667	120	63	3	54	156	72	189	9.82e-15	69.3
MS.gene030658.t1	AT2G46495	41.250	80	45	1	46	123	283	362	1.00e-14	70.9
MS.gene030658.t1	AT5G42200	37.500	80	49	1	44	123	68	146	1.07e-14	68.2
MS.gene030658.t1	AT3G18930	33.636	110	59	3	54	154	120	224	1.68e-14	70.5
MS.gene030658.t1	AT3G18930	33.636	110	59	3	54	154	120	224	1.68e-14	70.5
MS.gene030658.t1	AT3G18930	33.636	110	59	3	54	154	120	224	1.68e-14	70.5
MS.gene030658.t1	AT1G33480	30.189	106	69	3	50	154	71	172	1.76e-14	69.3
MS.gene030658.t1	AT5G06490	38.158	76	41	1	54	123	96	171	1.85e-14	68.2
MS.gene030658.t1	AT2G46160	30.702	114	66	2	43	149	93	200	2.71e-14	68.2
MS.gene030658.t1	AT2G46160	30.702	114	66	2	43	149	93	200	2.71e-14	68.2
MS.gene030658.t1	AT4G10150	36.486	74	45	1	54	127	86	157	3.96e-14	68.2
MS.gene030658.t1	AT5G53110	39.437	71	42	1	54	123	302	372	4.41e-14	68.9
MS.gene030658.t1	AT2G46494	40.278	72	42	1	53	123	287	358	4.76e-14	68.9
MS.gene030658.t1	AT2G34990	38.356	73	43	1	53	123	88	160	5.79e-14	68.6
MS.gene030658.t1	AT2G34990	38.356	73	43	1	53	123	66	138	5.92e-14	68.2
MS.gene030658.t1	AT5G36001	61.702	47	18	0	78	124	261	307	6.45e-14	68.2
MS.gene030658.t1	AT3G61550	31.746	126	66	4	47	162	92	207	8.46e-14	66.6
MS.gene030658.t1	AT4G35840	36.842	95	52	2	37	126	145	236	8.97e-14	67.0
MS.gene030658.t1	AT5G40250	50.000	48	24	0	80	127	142	189	1.13e-13	67.8
MS.gene030658.t1	AT3G11110	34.959	123	73	2	1	123	34	149	1.30e-13	65.1
MS.gene030658.t1	AT2G47560	41.096	73	42	1	52	123	78	150	1.39e-13	66.2
MS.gene030658.t1	AT2G34000	37.333	75	44	1	53	124	60	134	1.67e-13	64.7
MS.gene030658.t1	AT2G17730	33.333	90	58	1	37	124	150	239	2.01e-13	66.2
MS.gene030658.t1	AT2G18670	34.667	75	49	0	49	123	78	152	4.10e-13	64.3
MS.gene030658.t1	AT4G26400	44.118	68	30	2	56	123	223	282	8.64e-13	65.5
MS.gene030658.t1	AT4G26400	44.118	68	30	2	56	123	223	282	8.64e-13	65.5
MS.gene030658.t1	AT5G43420	56.818	44	19	0	80	123	137	180	8.98e-13	65.5
MS.gene030658.t1	AT1G35630	35.714	98	61	2	57	153	209	305	1.40e-12	64.7
MS.gene030658.t1	AT2G42350	37.333	75	45	1	49	123	70	142	1.52e-12	63.5
MS.gene030658.t1	AT2G42360	38.028	71	44	0	53	123	80	150	1.72e-12	63.5
MS.gene030658.t1	AT5G56340	44.118	68	30	2	56	123	241	300	2.68e-12	63.9
MS.gene030658.t1	AT4G26580	36.782	87	49	2	45	126	248	333	3.62e-12	63.5
MS.gene030658.t1	AT4G26580	36.782	87	49	2	45	126	248	333	3.62e-12	63.5
MS.gene030658.t1	AT5G46650	32.258	93	60	2	37	126	68	160	3.82e-12	63.2
MS.gene030658.t1	AT3G47990	54.000	50	22	1	74	123	171	219	6.72e-12	62.4
MS.gene030658.t1	AT3G47990	54.000	50	22	1	74	123	171	219	6.72e-12	62.4
MS.gene030658.t1	AT3G47990	54.000	50	22	1	74	123	171	219	6.72e-12	62.4
MS.gene030658.t1	AT3G47990	54.000	50	22	1	74	123	228	276	7.94e-12	62.4
MS.gene030658.t1	AT3G47990	54.000	50	22	1	74	123	212	260	8.81e-12	62.4
MS.gene030658.t1	AT1G53010	50.000	50	25	0	80	129	129	178	9.53e-12	60.5
MS.gene030658.t1	AT2G03000	51.064	47	22	1	80	126	480	525	1.58e-11	62.0
MS.gene030658.t1	AT3G61180	35.870	92	56	2	49	138	289	379	3.22e-11	60.8
MS.gene030658.t1	AT1G26800	38.462	78	41	2	57	134	95	165	5.23e-11	58.9
MS.gene030658.t1	AT1G12760	35.632	87	50	2	43	129	320	400	5.35e-11	60.5
MS.gene030658.t1	AT1G12760	35.632	87	50	2	43	129	249	329	5.39e-11	60.1
MS.gene030658.t1	AT2G37580	48.936	47	24	0	77	123	138	184	6.03e-11	59.3
MS.gene030658.t1	AT4G11360	35.484	93	55	3	37	127	44	133	7.31e-11	57.8
MS.gene030658.t1	AT4G30370	35.616	73	46	1	52	124	87	158	7.90e-11	58.2
MS.gene030658.t1	AT3G20395	36.486	74	44	1	53	126	146	216	8.33e-11	58.9
MS.gene030658.t1	AT4G35840	38.043	92	50	2	42	126	177	268	9.14e-11	58.9

Find 35 sgRNAs with CRISPR-Local

Find 49 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TGAGTTGAAACTTCCAAATT+TGG	0.155862	4.3:+8647141	MS.gene030658:CDS
ACACACTCTGTATCCAAATT+TGG	0.282885	4.3:-8647154	None:intergenic
CGAAGAGTCGTTGTTGTTGA+TGG	0.313102	4.3:-8647026	None:intergenic
TGGATCGTTATAATAGTTTC+TGG	0.322018	4.3:-8647367	None:intergenic
TGAAATCCATGGTTGCATTT+AGG	0.344720	4.3:-8647223	None:intergenic
TAGTTACGCTCCAAAGCTTC+AGG	0.368913	4.3:-8647400	None:intergenic
AAGCTTTGGAGCGTAACTAT+AGG	0.382409	4.3:+8647404	MS.gene030658:CDS
ACCACTAGAACCTGAAGCTT+TGG	0.391611	4.3:+8647390	MS.gene030658:CDS
CCATTATTAGGTGTGCCTTA+AGG	0.397999	4.3:+8646990	MS.gene030658:intron
TCTGGCACTGGCAACGCAAT+TGG	0.399704	4.3:-8647349	None:intergenic
GGAGGCACTGTCTGCACTTA+GGG	0.406481	4.3:-8647288	None:intergenic
CTTGAGACTTGTCAAAAGAT+TGG	0.411286	4.3:+8647310	MS.gene030658:CDS
ATGTTCGTTGCATCGACAAA+TGG	0.437786	4.3:+8647245	MS.gene030658:CDS
AGCTTTGGAGCGTAACTATA+GGG	0.446064	4.3:+8647405	MS.gene030658:CDS
CAGCAATCCTTCACCTCAAT+CGG	0.461316	4.3:+8647060	MS.gene030658:CDS
AGGAGGCACTGTCTGCACTT+AGG	0.469581	4.3:-8647289	None:intergenic
GTTATAATAGTTTCTGGCAC+TGG	0.477505	4.3:-8647361	None:intergenic
ATTGAATAGTTGTGAAGTAA+AGG	0.485238	4.3:-8646768	None:intergenic
AAGCTTCAGGTTCTAGTGGT+TGG	0.485771	4.3:-8647387	None:intergenic
AGAGTTCACAAAGGGTGAAA+AGG	0.489010	4.3:+8647189	MS.gene030658:CDS
TTGTTGACCGATTGAGGTGA+AGG	0.495226	4.3:-8647067	None:intergenic
GGCTACGTTTGAAAACCTTA+AGG	0.504858	4.3:-8647005	None:intergenic
ATTCCTTTGTTGACCGATTG+AGG	0.506390	4.3:-8647073	None:intergenic
TTGTGGAATCTCACACAAGA+AGG	0.511006	4.3:+8646798	MS.gene030658:CDS
TCAAAAGATTGGTGGGTCGC+AGG	0.520751	4.3:+8647321	MS.gene030658:CDS
ACTATTCAATGAGCTTCTTG+TGG	0.547062	4.3:+8646781	MS.gene030658:CDS
GAGACTTGTCAAAAGATTGG+TGG	0.549777	4.3:+8647313	MS.gene030658:CDS
AGACTTGTCAAAAGATTGGT+GGG	0.575777	4.3:+8647314	MS.gene030658:CDS
TGTCTCTCAGAGTTCACAAA+GGG	0.586259	4.3:+8647181	MS.gene030658:CDS
TCCAAAGCTTCAGGTTCTAG+TGG	0.589399	4.3:-8647391	None:intergenic
TCAGTTGAGTAGCTCACTGT+GGG	0.618570	4.3:-8647121	None:intergenic
TCACCTCAATCGGTCAACAA+AGG	0.632009	4.3:+8647070	MS.gene030658:CDS
TGCAACGAACATGAAATCCA+TGG	0.636741	4.3:-8647234	None:intergenic
CTCAGTTGAGTAGCTCACTG+TGG	0.674782	4.3:-8647122	None:intergenic
ATGTCTCTCAGAGTTCACAA+AGG	0.686490	4.3:+8647180	MS.gene030658:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!	AATATGAGTCTGTTGAATTA+TGG	-	chr4.3:8646886-8646905	None:intergenic	25.0%
!	ATTGAATAGTTGTGAAGTAA+AGG	-	chr4.3:8646771-8646790	None:intergenic	25.0%
!	TTGCATTAAACTCCATTATT+AGG	+	chr4.3:8646978-8646997	MS.gene030658:intron	25.0%
!!	AATTCAACAGACTCATATTT+TGG	+	chr4.3:8646887-8646906	MS.gene030658:intron	25.0%
!!!	TGTTGAATTATGGTTTTTTG+TGG	-	chr4.3:8646876-8646895	None:intergenic	25.0%
	TGGATCGTTATAATAGTTTC+TGG	-	chr4.3:8647370-8647389	None:intergenic	30.0%
!	TGAGTTGAAACTTCCAAATT+TGG	+	chr4.3:8647141-8647160	MS.gene030658:CDS	30.0%
!	TTAGTGATTGATGATCAACT+GGG	-	chr4.3:8646838-8646857	None:intergenic	30.0%
!!!	TATGGTTTTTTGTGGAAACA+GGG	-	chr4.3:8646868-8646887	None:intergenic	30.0%
!!!	TTATGGTTTTTTGTGGAAAC+AGG	-	chr4.3:8646869-8646888	None:intergenic	30.0%
	ACACACTCTGTATCCAAATT+TGG	-	chr4.3:8647157-8647176	None:intergenic	35.0%
	ACTATTCAATGAGCTTCTTG+TGG	+	chr4.3:8646781-8646800	MS.gene030658:CDS	35.0%
	AGACTTGTCAAAAGATTGGT+GGG	+	chr4.3:8647314-8647333	MS.gene030658:CDS	35.0%
	CTTGAGACTTGTCAAAAGAT+TGG	+	chr4.3:8647310-8647329	MS.gene030658:CDS	35.0%
	TGAAATCCATGGTTGCATTT+AGG	-	chr4.3:8647226-8647245	None:intergenic	35.0%
!	ATTTTGCCTAAATGCAACCA+TGG	+	chr4.3:8647217-8647236	MS.gene030658:CDS	35.0%
!	CAATCTTTTGACAAGTCTCA+AGG	-	chr4.3:8647312-8647331	None:intergenic	35.0%
!	GTTAGTGATTGATGATCAAC+TGG	-	chr4.3:8646839-8646858	None:intergenic	35.0%
!!	GTTATAATAGTTTCTGGCAC+TGG	-	chr4.3:8647364-8647383	None:intergenic	35.0%
!!!	ATGGTTTTTTGTGGAAACAG+GGG	-	chr4.3:8646867-8646886	None:intergenic	35.0%
	AGAGTTCACAAAGGGTGAAA+AGG	+	chr4.3:8647189-8647208	MS.gene030658:CDS	40.0%
	ATGTCTCTCAGAGTTCACAA+AGG	+	chr4.3:8647180-8647199	MS.gene030658:CDS	40.0%
	ATTCCTTTGTTGACCGATTG+AGG	-	chr4.3:8647076-8647095	None:intergenic	40.0%
	CCATTATTAGGTGTGCCTTA+AGG	+	chr4.3:8646990-8647009	MS.gene030658:intron	40.0%
	CCTTAAGGCACACCTAATAA+TGG	-	chr4.3:8646993-8647012	None:intergenic	40.0%
	GAGACTTGTCAAAAGATTGG+TGG	+	chr4.3:8647313-8647332	MS.gene030658:CDS	40.0%
	GGCTACGTTTGAAAACCTTA+AGG	-	chr4.3:8647008-8647027	None:intergenic	40.0%
	TGCAACGAACATGAAATCCA+TGG	-	chr4.3:8647237-8647256	None:intergenic	40.0%
	TGTCTCTCAGAGTTCACAAA+GGG	+	chr4.3:8647181-8647200	MS.gene030658:CDS	40.0%
	TTGTGGAATCTCACACAAGA+AGG	+	chr4.3:8646798-8646817	MS.gene030658:CDS	40.0%
!	ATGTTCGTTGCATCGACAAA+TGG	+	chr4.3:8647245-8647264	MS.gene030658:CDS	40.0%
!	TCTTTTGACAAGTCTCAAGG+AGG	-	chr4.3:8647309-8647328	None:intergenic	40.0%
!!	AAGCTTTGGAGCGTAACTAT+AGG	+	chr4.3:8647404-8647423	MS.gene030658:CDS	40.0%
!!	AGCTTTGGAGCGTAACTATA+GGG	+	chr4.3:8647405-8647424	MS.gene030658:CDS	40.0%
	ACCACTAGAACCTGAAGCTT+TGG	+	chr4.3:8647390-8647409	MS.gene030658:CDS	45.0%
	CAGCAATCCTTCACCTCAAT+CGG	+	chr4.3:8647060-8647079	MS.gene030658:CDS	45.0%
	TAGTTACGCTCCAAAGCTTC+AGG	-	chr4.3:8647403-8647422	None:intergenic	45.0%
	TCACCTCAATCGGTCAACAA+AGG	+	chr4.3:8647070-8647089	MS.gene030658:CDS	45.0%
	TCAGTTGAGTAGCTCACTGT+GGG	-	chr4.3:8647124-8647143	None:intergenic	45.0%
	TTGTTGACCGATTGAGGTGA+AGG	-	chr4.3:8647070-8647089	None:intergenic	45.0%
!	AAGCTTCAGGTTCTAGTGGT+TGG	-	chr4.3:8647390-8647409	None:intergenic	45.0%
!	CGAAGAGTCGTTGTTGTTGA+TGG	-	chr4.3:8647029-8647048	None:intergenic	45.0%
!	TCCAAAGCTTCAGGTTCTAG+TGG	-	chr4.3:8647394-8647413	None:intergenic	45.0%
!	TTTTGTGGAAACAGGGGAGT+TGG	-	chr4.3:8646861-8646880	None:intergenic	45.0%
	CTCAGTTGAGTAGCTCACTG+TGG	-	chr4.3:8647125-8647144	None:intergenic	50.0%
!	TCAAAAGATTGGTGGGTCGC+AGG	+	chr4.3:8647321-8647340	MS.gene030658:CDS	50.0%
!!	AGGAGGCACTGTCTGCACTT+AGG	-	chr4.3:8647292-8647311	None:intergenic	55.0%
!!	GGAGGCACTGTCTGCACTTA+GGG	-	chr4.3:8647291-8647310	None:intergenic	55.0%
!!	TCTGGCACTGGCAACGCAAT+TGG	-	chr4.3:8647352-8647371	None:intergenic	55.0%

Chromosome	Type	Strat	End	Strand	Name
chr4.3	gene	8646752	8647435	8646752	ID=MS.gene030658
chr4.3	mRNA	8646752	8647435	8646752	ID=MS.gene030658.t1;Parent=MS.gene030658
chr4.3	exon	8646752	8646819	8646752	ID=MS.gene030658.t1.exon1;Parent=MS.gene030658.t1
chr4.3	CDS	8646752	8646819	8646752	ID=cds.MS.gene030658.t1;Parent=MS.gene030658.t1
chr4.3	exon	8647000	8647435	8647000	ID=MS.gene030658.t1.exon2;Parent=MS.gene030658.t1
chr4.3	CDS	8647000	8647435	8647000	ID=cds.MS.gene030658.t1;Parent=MS.gene030658.t1

Gene Sequence

>MS.gene030658

ATGTATGCTTCTACTTCCTTTACTTCACAACTATTCAATGAGCTTCTTGTGGAATCTCACACAAGAAGGTTACTCATTCAAAACCCAGTTGATCATCAATCACTAACCAACTCCCCTGTTTCCACAAAAAACCATAATTCAACAGACTCATATTTTGGAGCTCGTGAATTTGATTCAAAAGTTGTGATGATACTTGCAGTCATATTATGTGTTTTTATTTGCTCACTTGCATTAAACTCCATTATTAGGTGTGCCTTAAGGTTTTCAAACGTAGCCATCAACAACAACGACTCTTCGTTGAGTTCAAACAGCAATCCTTCACCTCAATCGGTCAACAAAGGAATCAAGAAGAAAGCTCTCAAGACATTTCCCACAGTGAGCTACTCAACTGAGTTGAAACTTCCAAATTTGGATACAGAGTGTGTGATATGTCTCTCAGAGTTCACAAAGGGTGAAAAGGTGCGCATTTTGCCTAAATGCAACCATGGATTTCATGTTCGTTGCATCGACAAATGGCTAAAAGCACACTCATCATGCCCTAAGTGCAGACAGTGCCTCCTTGAGACTTGTCAAAAGATTGGTGGGTCGCAGGTGCAACCAATTGCGTTGCCAGTGCCAGAAACTATTATAACGATCCAACCACTAGAACCTGAAGCTTTGGAGCGTAACTATAGGGAAATATAA

Protein sequence

>MS.gene030658.t1

MYASTSFTSQLFNELLVESHTRRCALRFSNVAINNNDSSLSSNSNPSPQSVNKGIKKKALKTFPTVSYSTELKLPNLDTECVICLSEFTKGEKVRILPKCNHGFHVRCIDKWLKAHSSCPKCRQCLLETCQKIGGSQVQPIALPVPETIITIQPLEPEALERNYREI