Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene94889.t1 | XP_004506471.1 | 84.4 | 141 | 22 | 0 | 18 | 158 | 74 | 214 | 1.10E-58 | 236.1 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene94889.t1 | Q9SN27 | 69.8 | 86 | 24 | 1 | 18 | 103 | 68 | 151 | 2.2e-31 | 136.7 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene94889.t1 | A0A1S2YL87 | 84.4 | 141 | 22 | 0 | 18 | 158 | 74 | 214 | 8.0e-59 | 236.1 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene94889.t1 | MTR_4g030070 | 95.597 | 159 | 7 | 0 | 1 | 159 | 64 | 222 | 2.20e-110 | 313 |
MS.gene94889.t1 | MTR_7g076250 | 39.583 | 144 | 68 | 7 | 10 | 148 | 57 | 186 | 3.33e-24 | 93.2 |
MS.gene94889.t1 | MTR_1g492830 | 47.945 | 73 | 36 | 1 | 22 | 92 | 61 | 133 | 4.59e-20 | 83.2 |
MS.gene94889.t1 | MTR_3g081030 | 42.683 | 82 | 47 | 0 | 14 | 95 | 86 | 167 | 1.59e-19 | 81.6 |
MS.gene94889.t1 | MTR_4g129420 | 45.946 | 74 | 38 | 1 | 22 | 93 | 117 | 190 | 1.66e-18 | 81.6 |
MS.gene94889.t1 | MTR_5g034790 | 44.444 | 72 | 39 | 1 | 22 | 92 | 116 | 187 | 1.04e-17 | 79.0 |
MS.gene94889.t1 | MTR_6g055030 | 45.333 | 75 | 37 | 1 | 22 | 92 | 97 | 171 | 1.78e-17 | 77.8 |
MS.gene94889.t1 | MTR_3g116000 | 45.588 | 68 | 37 | 0 | 22 | 89 | 79 | 146 | 2.07e-17 | 75.5 |
MS.gene94889.t1 | MTR_5g024730 | 45.070 | 71 | 36 | 1 | 22 | 89 | 77 | 147 | 2.19e-17 | 75.9 |
MS.gene94889.t1 | MTR_7g073200 | 38.554 | 83 | 50 | 1 | 22 | 103 | 81 | 163 | 3.53e-17 | 74.7 |
MS.gene94889.t1 | MTR_8g063660 | 45.833 | 72 | 38 | 1 | 22 | 92 | 68 | 139 | 3.57e-17 | 77.0 |
MS.gene94889.t1 | MTR_3g012550 | 37.168 | 113 | 57 | 3 | 7 | 105 | 57 | 169 | 4.76e-17 | 74.3 |
MS.gene94889.t1 | MTR_7g113800 | 38.889 | 90 | 51 | 1 | 14 | 99 | 83 | 172 | 4.86e-17 | 77.0 |
MS.gene94889.t1 | MTR_3g464780 | 36.364 | 88 | 51 | 1 | 22 | 104 | 102 | 189 | 6.26e-17 | 75.5 |
MS.gene94889.t1 | MTR_1g100737 | 42.857 | 77 | 38 | 2 | 22 | 92 | 92 | 168 | 7.31e-17 | 74.3 |
MS.gene94889.t1 | MTR_8g089880 | 38.710 | 93 | 54 | 2 | 21 | 110 | 126 | 218 | 7.58e-17 | 75.5 |
MS.gene94889.t1 | MTR_3g099650 | 42.857 | 77 | 40 | 1 | 22 | 94 | 107 | 183 | 9.84e-17 | 76.3 |
MS.gene94889.t1 | MTR_8g023400 | 46.479 | 71 | 34 | 3 | 21 | 89 | 91 | 159 | 1.11e-16 | 75.5 |
MS.gene94889.t1 | MTR_3g086700 | 30.519 | 154 | 84 | 5 | 1 | 137 | 15 | 162 | 1.14e-16 | 73.6 |
MS.gene94889.t1 | MTR_8g093010 | 34.831 | 89 | 56 | 1 | 11 | 97 | 96 | 184 | 1.25e-16 | 73.9 |
MS.gene94889.t1 | MTR_8g032690 | 58.696 | 46 | 19 | 0 | 47 | 92 | 19 | 64 | 1.60e-16 | 71.2 |
MS.gene94889.t1 | MTR_5g066250 | 39.189 | 74 | 44 | 1 | 22 | 94 | 134 | 207 | 2.10e-16 | 75.5 |
MS.gene94889.t1 | MTR_5g064980 | 33.036 | 112 | 68 | 3 | 22 | 129 | 108 | 216 | 2.81e-16 | 75.1 |
MS.gene94889.t1 | MTR_3g091620 | 41.096 | 73 | 42 | 1 | 22 | 93 | 101 | 173 | 3.56e-16 | 74.7 |
MS.gene94889.t1 | MTR_1g056350 | 40.964 | 83 | 45 | 1 | 21 | 99 | 73 | 155 | 4.28e-16 | 71.6 |
MS.gene94889.t1 | MTR_4g106680 | 43.478 | 69 | 38 | 1 | 22 | 89 | 106 | 174 | 4.43e-16 | 73.9 |
MS.gene94889.t1 | MTR_7g117540 | 46.154 | 65 | 35 | 0 | 31 | 95 | 85 | 149 | 5.42e-16 | 73.6 |
MS.gene94889.t1 | MTR_6g007737 | 43.056 | 72 | 40 | 1 | 22 | 92 | 133 | 204 | 5.85e-16 | 73.9 |
MS.gene94889.t1 | MTR_3g110190 | 44.928 | 69 | 37 | 1 | 22 | 89 | 66 | 134 | 8.83e-16 | 73.2 |
MS.gene94889.t1 | MTR_3g094000 | 37.209 | 86 | 49 | 2 | 22 | 102 | 91 | 176 | 8.89e-16 | 70.9 |
MS.gene94889.t1 | MTR_5g064990 | 41.758 | 91 | 40 | 3 | 22 | 102 | 114 | 201 | 1.16e-15 | 73.2 |
MS.gene94889.t1 | MTR_3g078470 | 36.986 | 73 | 43 | 1 | 20 | 89 | 74 | 146 | 1.20e-15 | 71.6 |
MS.gene94889.t1 | MTR_5g082940 | 36.471 | 85 | 51 | 1 | 11 | 92 | 64 | 148 | 1.59e-15 | 70.1 |
MS.gene94889.t1 | MTR_3g095560 | 31.304 | 115 | 74 | 2 | 12 | 124 | 99 | 210 | 1.98e-15 | 71.2 |
MS.gene94889.t1 | MTR_7g116200 | 39.706 | 68 | 41 | 0 | 22 | 89 | 68 | 135 | 2.54e-15 | 69.7 |
MS.gene94889.t1 | MTR_8g092960 | 37.179 | 78 | 47 | 1 | 22 | 97 | 103 | 180 | 2.83e-15 | 70.5 |
MS.gene94889.t1 | MTR_5g030010 | 41.096 | 73 | 42 | 1 | 22 | 93 | 122 | 194 | 3.62e-15 | 71.6 |
MS.gene94889.t1 | MTR_3g086730 | 31.788 | 151 | 84 | 5 | 1 | 136 | 22 | 168 | 4.05e-15 | 70.5 |
MS.gene94889.t1 | MTR_3g078450 | 35.897 | 78 | 47 | 1 | 15 | 89 | 69 | 146 | 5.08e-15 | 69.7 |
MS.gene94889.t1 | MTR_1g074190 | 36.145 | 83 | 46 | 1 | 22 | 97 | 99 | 181 | 5.58e-15 | 71.2 |
MS.gene94889.t1 | MTR_8g092840 | 37.179 | 78 | 47 | 1 | 22 | 97 | 113 | 190 | 6.56e-15 | 69.7 |
MS.gene94889.t1 | MTR_3g100400 | 39.189 | 74 | 44 | 1 | 22 | 94 | 130 | 203 | 9.50e-15 | 70.9 |
MS.gene94889.t1 | MTR_2g436100 | 36.145 | 83 | 52 | 1 | 13 | 94 | 84 | 166 | 1.11e-14 | 69.7 |
MS.gene94889.t1 | MTR_8g066780 | 37.000 | 100 | 58 | 3 | 4 | 100 | 97 | 194 | 1.13e-14 | 70.5 |
MS.gene94889.t1 | MTR_2g055790 | 39.189 | 74 | 41 | 2 | 22 | 94 | 77 | 147 | 1.20e-14 | 68.6 |
MS.gene94889.t1 | MTR_8g099515 | 38.182 | 110 | 55 | 3 | 2 | 100 | 281 | 388 | 1.64e-14 | 70.1 |
MS.gene94889.t1 | MTR_5g064890 | 40.000 | 75 | 42 | 2 | 21 | 93 | 127 | 200 | 1.68e-14 | 69.7 |
MS.gene94889.t1 | MTR_5g026730 | 39.080 | 87 | 44 | 2 | 13 | 96 | 63 | 143 | 1.70e-14 | 67.4 |
MS.gene94889.t1 | MTR_7g116220 | 33.663 | 101 | 60 | 2 | 22 | 115 | 70 | 170 | 2.07e-14 | 67.4 |
MS.gene94889.t1 | MTR_8g099495 | 56.522 | 46 | 20 | 0 | 44 | 89 | 344 | 389 | 2.35e-14 | 69.7 |
MS.gene94889.t1 | MTR_1g082550 | 37.805 | 82 | 47 | 1 | 22 | 99 | 98 | 179 | 2.88e-14 | 69.3 |
MS.gene94889.t1 | MTR_8g009190 | 34.737 | 95 | 56 | 2 | 29 | 119 | 83 | 175 | 3.49e-14 | 68.6 |
MS.gene94889.t1 | MTR_4g063070 | 36.145 | 83 | 50 | 1 | 22 | 101 | 308 | 390 | 3.67e-14 | 68.9 |
MS.gene94889.t1 | MTR_7g116210 | 38.235 | 68 | 42 | 0 | 22 | 89 | 10 | 77 | 4.78e-14 | 65.1 |
MS.gene94889.t1 | MTR_8g092930 | 34.177 | 79 | 50 | 1 | 22 | 98 | 112 | 190 | 6.41e-14 | 67.0 |
MS.gene94889.t1 | MTR_8g073120 | 36.620 | 71 | 42 | 1 | 22 | 89 | 70 | 140 | 6.97e-14 | 66.6 |
MS.gene94889.t1 | MTR_2g044570 | 43.478 | 69 | 35 | 1 | 31 | 95 | 63 | 131 | 7.83e-14 | 67.8 |
MS.gene94889.t1 | MTR_5g076990 | 41.772 | 79 | 35 | 2 | 22 | 92 | 76 | 151 | 8.27e-14 | 67.8 |
MS.gene94889.t1 | MTR_4g120270 | 35.556 | 90 | 49 | 2 | 22 | 111 | 80 | 160 | 9.22e-14 | 67.0 |
MS.gene94889.t1 | MTR_2g009310 | 36.486 | 74 | 46 | 1 | 21 | 93 | 134 | 207 | 1.05e-13 | 67.8 |
MS.gene94889.t1 | MTR_2g090950 | 28.947 | 152 | 91 | 4 | 3 | 139 | 74 | 223 | 1.11e-13 | 66.6 |
MS.gene94889.t1 | MTR_2g090905 | 51.020 | 49 | 24 | 0 | 46 | 94 | 70 | 118 | 1.24e-13 | 64.3 |
MS.gene94889.t1 | MTR_7g116180 | 38.889 | 72 | 40 | 1 | 22 | 89 | 67 | 138 | 1.34e-13 | 65.1 |
MS.gene94889.t1 | MTR_8g092985 | 34.615 | 78 | 49 | 1 | 22 | 97 | 111 | 188 | 1.45e-13 | 65.9 |
MS.gene94889.t1 | MTR_4g093830 | 35.616 | 73 | 46 | 1 | 22 | 93 | 126 | 198 | 1.81e-13 | 67.0 |
MS.gene94889.t1 | MTR_4g056590 | 40.278 | 72 | 41 | 1 | 22 | 93 | 100 | 169 | 1.87e-13 | 65.1 |
MS.gene94889.t1 | MTR_5g071930 | 36.250 | 80 | 49 | 1 | 10 | 89 | 54 | 131 | 2.08e-13 | 65.1 |
MS.gene94889.t1 | MTR_7g079290 | 45.455 | 55 | 30 | 0 | 44 | 98 | 152 | 206 | 2.18e-13 | 65.5 |
MS.gene94889.t1 | MTR_1g070425 | 38.889 | 72 | 40 | 1 | 22 | 89 | 68 | 139 | 2.32e-13 | 64.7 |
MS.gene94889.t1 | MTR_8g092970 | 36.364 | 88 | 54 | 1 | 12 | 97 | 94 | 181 | 2.75e-13 | 65.1 |
MS.gene94889.t1 | MTR_5g010100 | 38.889 | 72 | 40 | 2 | 27 | 94 | 58 | 129 | 3.00e-13 | 63.5 |
MS.gene94889.t1 | MTR_2g035800 | 40.789 | 76 | 44 | 1 | 15 | 89 | 69 | 144 | 3.11e-13 | 63.9 |
MS.gene94889.t1 | MTR_8g071815 | 39.062 | 64 | 39 | 0 | 47 | 110 | 90 | 153 | 4.98e-13 | 63.9 |
MS.gene94889.t1 | MTR_8g019710 | 44.068 | 59 | 30 | 1 | 34 | 89 | 38 | 96 | 5.79e-13 | 62.8 |
MS.gene94889.t1 | MTR_5g009200 | 44.444 | 72 | 37 | 1 | 21 | 89 | 321 | 392 | 5.94e-13 | 65.5 |
MS.gene94889.t1 | MTR_3g071300 | 38.158 | 76 | 42 | 1 | 22 | 92 | 76 | 151 | 6.76e-13 | 63.2 |
MS.gene94889.t1 | MTR_6g087150 | 39.130 | 69 | 41 | 1 | 22 | 89 | 93 | 161 | 6.81e-13 | 65.5 |
MS.gene94889.t1 | MTR_1g090460 | 34.259 | 108 | 60 | 4 | 12 | 110 | 51 | 156 | 6.90e-13 | 62.8 |
MS.gene94889.t1 | MTR_5g009210 | 54.348 | 46 | 21 | 0 | 44 | 89 | 312 | 357 | 7.10e-13 | 65.1 |
MS.gene94889.t1 | MTR_8g092990 | 45.455 | 55 | 30 | 0 | 44 | 98 | 138 | 192 | 7.70e-13 | 64.3 |
MS.gene94889.t1 | MTR_1g090480 | 52.000 | 50 | 24 | 0 | 47 | 96 | 102 | 151 | 8.22e-13 | 62.8 |
MS.gene94889.t1 | MTR_1g043410 | 34.722 | 72 | 43 | 1 | 22 | 89 | 94 | 165 | 8.27e-13 | 65.1 |
MS.gene94889.t1 | MTR_8g028465 | 36.709 | 79 | 49 | 1 | 21 | 99 | 89 | 166 | 8.63e-13 | 63.5 |
MS.gene94889.t1 | MTR_7g059360 | 43.636 | 55 | 31 | 0 | 46 | 100 | 157 | 211 | 8.65e-13 | 63.9 |
MS.gene94889.t1 | MTR_7g079280 | 43.860 | 57 | 32 | 0 | 43 | 99 | 104 | 160 | 9.05e-13 | 63.2 |
MS.gene94889.t1 | MTR_3g083480 | 32.174 | 115 | 71 | 3 | 6 | 119 | 201 | 309 | 9.67e-13 | 64.7 |
MS.gene94889.t1 | MTR_3g114500 | 42.308 | 78 | 43 | 1 | 22 | 99 | 48 | 123 | 1.06e-12 | 61.6 |
MS.gene94889.t1 | MTR_5g026720 | 48.980 | 49 | 25 | 0 | 47 | 95 | 93 | 141 | 1.10e-12 | 62.4 |
MS.gene94889.t1 | MTR_1g070140 | 50.000 | 46 | 23 | 0 | 47 | 92 | 130 | 175 | 1.19e-12 | 64.7 |
MS.gene94889.t1 | MTR_5g022920 | 48.077 | 52 | 27 | 0 | 41 | 92 | 183 | 234 | 1.26e-12 | 63.5 |
MS.gene94889.t1 | MTR_5g009190 | 43.056 | 72 | 38 | 1 | 21 | 89 | 265 | 336 | 1.50e-12 | 64.3 |
MS.gene94889.t1 | MTR_2g041200 | 41.379 | 58 | 34 | 0 | 44 | 101 | 106 | 163 | 1.66e-12 | 62.4 |
MS.gene94889.t1 | MTR_6g055030 | 51.923 | 52 | 22 | 1 | 44 | 92 | 89 | 140 | 1.99e-12 | 63.5 |
MS.gene94889.t1 | MTR_8g066740 | 36.709 | 79 | 39 | 2 | 22 | 92 | 76 | 151 | 3.10e-12 | 63.2 |
MS.gene94889.t1 | MTR_8g098770 | 31.818 | 88 | 50 | 3 | 27 | 113 | 67 | 145 | 4.34e-12 | 60.8 |
MS.gene94889.t1 | MTR_8g074900 | 42.647 | 68 | 36 | 1 | 22 | 89 | 158 | 222 | 4.69e-12 | 62.0 |
MS.gene94889.t1 | MTR_3g091200 | 34.444 | 90 | 50 | 2 | 5 | 91 | 292 | 375 | 1.02e-11 | 62.0 |
MS.gene94889.t1 | MTR_1g014710 | 38.889 | 72 | 40 | 2 | 24 | 92 | 207 | 277 | 1.40e-11 | 61.2 |
MS.gene94889.t1 | MTR_4g108830 | 35.294 | 68 | 44 | 0 | 22 | 89 | 121 | 188 | 1.42e-11 | 60.1 |
MS.gene94889.t1 | MTR_4g108830 | 35.294 | 68 | 44 | 0 | 22 | 89 | 149 | 216 | 1.70e-11 | 60.5 |
MS.gene94889.t1 | MTR_5g092750 | 43.636 | 55 | 25 | 1 | 35 | 89 | 179 | 227 | 2.02e-11 | 60.5 |
MS.gene94889.t1 | MTR_7g078150 | 37.333 | 75 | 43 | 2 | 27 | 97 | 67 | 141 | 2.05e-11 | 59.3 |
MS.gene94889.t1 | MTR_2g096350 | 32.530 | 83 | 46 | 1 | 44 | 126 | 132 | 204 | 2.23e-11 | 60.1 |
MS.gene94889.t1 | MTR_5g092790 | 41.818 | 55 | 26 | 1 | 35 | 89 | 179 | 227 | 2.99e-11 | 59.7 |
MS.gene94889.t1 | MTR_1g090450 | 53.488 | 43 | 20 | 0 | 51 | 93 | 111 | 153 | 3.49e-11 | 58.5 |
MS.gene94889.t1 | MTR_8g028815 | 34.375 | 96 | 50 | 4 | 9 | 94 | 48 | 140 | 3.84e-11 | 58.5 |
MS.gene94889.t1 | MTR_5g010720 | 31.683 | 101 | 63 | 3 | 1 | 101 | 291 | 385 | 4.03e-11 | 60.5 |
MS.gene94889.t1 | MTR_7g096690 | 47.826 | 46 | 24 | 0 | 47 | 92 | 100 | 145 | 6.47e-11 | 59.7 |
MS.gene94889.t1 | MTR_3g078520 | 29.070 | 86 | 59 | 1 | 8 | 91 | 62 | 147 | 7.17e-11 | 57.8 |
MS.gene94889.t1 | MTR_3g087900 | 39.437 | 71 | 40 | 3 | 25 | 94 | 48 | 116 | 7.61e-11 | 57.4 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene94889.t1 | AT4G10160 | 69.231 | 91 | 26 | 1 | 13 | 103 | 63 | 151 | 7.48e-44 | 144 |
MS.gene94889.t1 | AT4G10150 | 71.951 | 82 | 23 | 0 | 13 | 94 | 77 | 158 | 4.19e-43 | 143 |
MS.gene94889.t1 | AT1G33480 | 72.289 | 83 | 23 | 0 | 13 | 95 | 66 | 148 | 3.97e-42 | 141 |
MS.gene94889.t1 | AT4G09110 | 43.299 | 97 | 48 | 3 | 22 | 112 | 94 | 189 | 8.53e-20 | 84.0 |
MS.gene94889.t1 | AT4G24015 | 39.286 | 84 | 51 | 0 | 9 | 92 | 67 | 150 | 1.75e-18 | 78.2 |
MS.gene94889.t1 | AT4G09120 | 45.570 | 79 | 37 | 2 | 22 | 94 | 94 | 172 | 5.19e-18 | 79.7 |
MS.gene94889.t1 | AT4G09130 | 38.095 | 105 | 60 | 2 | 22 | 121 | 91 | 195 | 5.64e-18 | 79.7 |
MS.gene94889.t1 | AT2G18650 | 36.885 | 122 | 68 | 2 | 22 | 134 | 99 | 220 | 6.25e-18 | 79.7 |
MS.gene94889.t1 | AT5G01880 | 39.506 | 81 | 48 | 1 | 22 | 101 | 79 | 159 | 7.50e-18 | 75.9 |
MS.gene94889.t1 | AT4G30400 | 45.714 | 70 | 36 | 1 | 22 | 89 | 107 | 176 | 1.10e-17 | 79.3 |
MS.gene94889.t1 | AT1G35330 | 33.621 | 116 | 71 | 2 | 22 | 131 | 100 | 215 | 1.12e-17 | 78.6 |
MS.gene94889.t1 | AT1G23980 | 45.205 | 73 | 39 | 1 | 22 | 93 | 118 | 190 | 2.52e-17 | 77.8 |
MS.gene94889.t1 | AT5G05280 | 41.667 | 72 | 42 | 0 | 22 | 93 | 88 | 159 | 3.30e-17 | 74.7 |
MS.gene94889.t1 | AT3G10910 | 33.628 | 113 | 70 | 2 | 4 | 115 | 70 | 178 | 4.86e-17 | 74.3 |
MS.gene94889.t1 | AT4G15975 | 34.906 | 106 | 68 | 1 | 14 | 119 | 44 | 148 | 5.64e-17 | 75.5 |
MS.gene94889.t1 | AT5G06490 | 37.255 | 102 | 55 | 3 | 21 | 114 | 95 | 195 | 5.84e-17 | 74.7 |
MS.gene94889.t1 | AT2G35000 | 33.043 | 115 | 71 | 2 | 22 | 130 | 106 | 220 | 5.89e-17 | 77.0 |
MS.gene94889.t1 | AT1G20823 | 37.778 | 90 | 54 | 1 | 2 | 89 | 64 | 153 | 6.77e-17 | 74.3 |
MS.gene94889.t1 | AT4G17905 | 31.724 | 145 | 69 | 5 | 16 | 157 | 123 | 240 | 1.14e-16 | 75.5 |
MS.gene94889.t1 | AT1G72310 | 33.019 | 106 | 71 | 0 | 19 | 124 | 99 | 204 | 1.20e-16 | 75.5 |
MS.gene94889.t1 | AT5G05810 | 31.111 | 135 | 86 | 2 | 22 | 155 | 120 | 248 | 1.32e-16 | 75.9 |
MS.gene94889.t1 | AT5G43420 | 30.597 | 134 | 73 | 2 | 22 | 135 | 98 | 231 | 1.46e-16 | 75.9 |
MS.gene94889.t1 | AT4G17905 | 31.724 | 145 | 69 | 5 | 16 | 157 | 149 | 266 | 1.55e-16 | 75.5 |
MS.gene94889.t1 | AT1G72200 | 31.579 | 114 | 74 | 1 | 22 | 131 | 115 | 228 | 3.70e-16 | 74.7 |
MS.gene94889.t1 | AT1G76410 | 44.286 | 70 | 37 | 1 | 22 | 89 | 77 | 146 | 5.36e-16 | 71.6 |
MS.gene94889.t1 | AT2G27940 | 41.176 | 68 | 40 | 0 | 22 | 89 | 115 | 182 | 6.58e-16 | 72.4 |
MS.gene94889.t1 | AT3G16720 | 34.862 | 109 | 67 | 2 | 22 | 130 | 94 | 198 | 7.35e-16 | 73.2 |
MS.gene94889.t1 | AT2G47560 | 42.667 | 75 | 40 | 1 | 23 | 94 | 81 | 155 | 8.70e-16 | 72.0 |
MS.gene94889.t1 | AT2G35910 | 41.176 | 85 | 48 | 2 | 22 | 105 | 121 | 204 | 9.67e-16 | 71.6 |
MS.gene94889.t1 | AT5G17600 | 38.144 | 97 | 53 | 3 | 17 | 107 | 111 | 206 | 9.83e-16 | 73.6 |
MS.gene94889.t1 | AT4G40070 | 37.500 | 96 | 53 | 3 | 13 | 104 | 87 | 179 | 9.99e-16 | 73.2 |
MS.gene94889.t1 | AT4G09100 | 37.662 | 77 | 44 | 1 | 22 | 94 | 56 | 132 | 1.72e-15 | 69.3 |
MS.gene94889.t1 | AT2G20030 | 31.081 | 148 | 86 | 4 | 22 | 155 | 98 | 243 | 1.97e-15 | 72.8 |
MS.gene94889.t1 | AT3G60220 | 43.662 | 71 | 36 | 1 | 29 | 95 | 95 | 165 | 2.14e-15 | 72.4 |
MS.gene94889.t1 | AT4G11360 | 36.986 | 73 | 44 | 1 | 29 | 99 | 67 | 139 | 3.26e-15 | 68.9 |
MS.gene94889.t1 | AT3G48030 | 45.205 | 73 | 38 | 2 | 22 | 92 | 102 | 174 | 4.21e-15 | 70.9 |
MS.gene94889.t1 | AT3G48030 | 45.205 | 73 | 38 | 2 | 22 | 92 | 180 | 252 | 4.59e-15 | 71.6 |
MS.gene94889.t1 | AT3G18773 | 37.179 | 78 | 47 | 1 | 22 | 97 | 103 | 180 | 5.29e-15 | 69.7 |
MS.gene94889.t1 | AT3G18930 | 32.576 | 132 | 74 | 3 | 16 | 132 | 114 | 245 | 5.94e-15 | 71.2 |
MS.gene94889.t1 | AT3G18930 | 32.576 | 132 | 74 | 3 | 16 | 132 | 114 | 245 | 5.94e-15 | 71.2 |
MS.gene94889.t1 | AT3G18930 | 32.576 | 132 | 74 | 3 | 16 | 132 | 114 | 245 | 5.94e-15 | 71.2 |
MS.gene94889.t1 | AT5G07040 | 38.636 | 88 | 50 | 2 | 21 | 105 | 65 | 151 | 6.02e-15 | 68.6 |
MS.gene94889.t1 | AT3G62690 | 40.659 | 91 | 44 | 3 | 23 | 108 | 88 | 173 | 1.08e-14 | 69.7 |
MS.gene94889.t1 | AT1G49230 | 32.632 | 95 | 62 | 1 | 12 | 104 | 94 | 188 | 1.13e-14 | 68.9 |
MS.gene94889.t1 | AT3G61550 | 44.286 | 70 | 36 | 1 | 43 | 109 | 132 | 201 | 1.41e-14 | 68.6 |
MS.gene94889.t1 | AT1G53820 | 39.706 | 68 | 41 | 0 | 22 | 89 | 95 | 162 | 1.75e-14 | 69.7 |
MS.gene94889.t1 | AT3G03550 | 39.506 | 81 | 44 | 2 | 42 | 122 | 154 | 229 | 1.76e-14 | 69.7 |
MS.gene94889.t1 | AT1G32361 | 36.735 | 98 | 47 | 3 | 6 | 92 | 106 | 199 | 1.77e-14 | 69.7 |
MS.gene94889.t1 | AT1G22500 | 35.294 | 102 | 61 | 2 | 14 | 111 | 81 | 181 | 1.87e-14 | 69.7 |
MS.gene94889.t1 | AT5G40250 | 30.508 | 118 | 69 | 3 | 22 | 126 | 107 | 224 | 1.92e-14 | 69.7 |
MS.gene94889.t1 | AT1G49220 | 36.145 | 83 | 51 | 1 | 17 | 97 | 103 | 185 | 1.97e-14 | 68.9 |
MS.gene94889.t1 | AT5G46650 | 33.775 | 151 | 65 | 7 | 22 | 143 | 85 | 229 | 2.08e-14 | 69.3 |
MS.gene94889.t1 | AT5G53110 | 43.902 | 82 | 40 | 2 | 21 | 96 | 301 | 382 | 2.42e-14 | 69.7 |
MS.gene94889.t1 | AT4G11370 | 34.247 | 73 | 46 | 1 | 29 | 99 | 68 | 140 | 2.64e-14 | 66.6 |
MS.gene94889.t1 | AT1G72220 | 40.278 | 72 | 42 | 1 | 22 | 92 | 151 | 222 | 2.71e-14 | 69.3 |
MS.gene94889.t1 | AT5G10380 | 37.838 | 74 | 45 | 1 | 21 | 93 | 108 | 181 | 2.79e-14 | 68.9 |
MS.gene94889.t1 | AT2G46160 | 46.154 | 65 | 32 | 1 | 44 | 105 | 135 | 199 | 3.00e-14 | 67.8 |
MS.gene94889.t1 | AT2G46160 | 46.154 | 65 | 32 | 1 | 44 | 105 | 135 | 199 | 3.00e-14 | 67.8 |
MS.gene94889.t1 | AT4G33565 | 43.243 | 74 | 39 | 1 | 42 | 115 | 212 | 282 | 3.01e-14 | 69.3 |
MS.gene94889.t1 | AT2G34990 | 35.443 | 79 | 47 | 1 | 18 | 92 | 85 | 163 | 3.94e-14 | 68.6 |
MS.gene94889.t1 | AT1G49210 | 30.693 | 101 | 64 | 2 | 22 | 116 | 108 | 208 | 4.27e-14 | 67.4 |
MS.gene94889.t1 | AT2G34990 | 35.443 | 79 | 47 | 1 | 18 | 92 | 63 | 141 | 4.28e-14 | 68.6 |
MS.gene94889.t1 | AT5G57750 | 42.857 | 63 | 34 | 1 | 29 | 89 | 102 | 164 | 6.95e-14 | 66.6 |
MS.gene94889.t1 | AT4G28890 | 42.105 | 76 | 43 | 1 | 15 | 89 | 90 | 165 | 6.99e-14 | 68.2 |
MS.gene94889.t1 | AT5G58580 | 43.243 | 74 | 40 | 1 | 22 | 93 | 111 | 184 | 9.40e-14 | 67.4 |
MS.gene94889.t1 | AT2G35420 | 30.435 | 138 | 78 | 3 | 15 | 136 | 70 | 205 | 9.51e-14 | 67.0 |
MS.gene94889.t1 | AT4G26400 | 37.079 | 89 | 50 | 2 | 6 | 94 | 205 | 287 | 1.28e-13 | 67.4 |
MS.gene94889.t1 | AT4G26400 | 37.079 | 89 | 50 | 2 | 6 | 94 | 205 | 287 | 1.28e-13 | 67.4 |
MS.gene94889.t1 | AT2G42350 | 39.189 | 74 | 45 | 0 | 22 | 95 | 75 | 148 | 1.36e-13 | 65.9 |
MS.gene94889.t1 | AT5G27420 | 29.268 | 123 | 83 | 1 | 17 | 135 | 90 | 212 | 1.38e-13 | 67.4 |
MS.gene94889.t1 | AT3G20395 | 42.647 | 68 | 38 | 1 | 22 | 89 | 147 | 213 | 1.40e-13 | 66.2 |
MS.gene94889.t1 | AT2G17450 | 32.292 | 96 | 57 | 1 | 7 | 94 | 54 | 149 | 1.54e-13 | 65.5 |
MS.gene94889.t1 | AT1G04360 | 46.667 | 60 | 31 | 1 | 34 | 92 | 120 | 179 | 1.60e-13 | 67.4 |
MS.gene94889.t1 | AT1G49200 | 33.735 | 83 | 53 | 1 | 17 | 97 | 104 | 186 | 1.75e-13 | 65.9 |
MS.gene94889.t1 | AT3G05200 | 29.268 | 123 | 74 | 2 | 22 | 131 | 99 | 221 | 2.53e-13 | 66.6 |
MS.gene94889.t1 | AT5G45290 | 43.548 | 62 | 33 | 2 | 29 | 89 | 472 | 532 | 5.51e-13 | 65.9 |
MS.gene94889.t1 | AT2G17730 | 35.484 | 93 | 56 | 1 | 1 | 89 | 146 | 238 | 5.77e-13 | 64.7 |
MS.gene94889.t1 | AT5G66070 | 38.554 | 83 | 49 | 2 | 7 | 89 | 138 | 218 | 6.37e-13 | 64.3 |
MS.gene94889.t1 | AT5G66070 | 38.554 | 83 | 49 | 2 | 7 | 89 | 138 | 218 | 6.37e-13 | 64.3 |
MS.gene94889.t1 | AT2G42360 | 28.866 | 97 | 67 | 1 | 22 | 116 | 81 | 177 | 6.83e-13 | 64.3 |
MS.gene94889.t1 | AT4G35840 | 41.333 | 75 | 40 | 1 | 22 | 92 | 162 | 236 | 8.12e-13 | 64.3 |
MS.gene94889.t1 | AT5G66070 | 38.554 | 83 | 49 | 2 | 7 | 89 | 162 | 242 | 1.03e-12 | 63.9 |
MS.gene94889.t1 | AT3G14320 | 29.032 | 124 | 81 | 3 | 21 | 143 | 62 | 179 | 1.18e-12 | 63.2 |
MS.gene94889.t1 | AT5G56340 | 36.458 | 96 | 55 | 2 | 6 | 101 | 223 | 312 | 1.42e-12 | 64.7 |
MS.gene94889.t1 | AT1G74410 | 37.681 | 69 | 42 | 1 | 22 | 89 | 150 | 218 | 4.20e-12 | 62.0 |
MS.gene94889.t1 | AT5G42200 | 35.294 | 85 | 54 | 1 | 18 | 101 | 74 | 158 | 4.84e-12 | 60.8 |
MS.gene94889.t1 | AT4G17920 | 33.019 | 106 | 51 | 3 | 4 | 92 | 53 | 155 | 5.83e-12 | 62.4 |
MS.gene94889.t1 | AT5G45290 | 44.444 | 63 | 32 | 3 | 29 | 89 | 472 | 533 | 6.10e-12 | 62.8 |
MS.gene94889.t1 | AT5G20910 | 37.037 | 81 | 46 | 3 | 24 | 101 | 204 | 282 | 6.20e-12 | 62.4 |
MS.gene94889.t1 | AT1G63840 | 35.294 | 68 | 42 | 1 | 29 | 94 | 71 | 138 | 1.00e-11 | 60.1 |
MS.gene94889.t1 | AT2G44578 | 35.714 | 70 | 45 | 0 | 47 | 116 | 70 | 139 | 1.28e-11 | 59.3 |
MS.gene94889.t1 | AT2G18670 | 34.286 | 70 | 44 | 1 | 22 | 89 | 83 | 152 | 2.35e-11 | 59.3 |
MS.gene94889.t1 | AT1G63170 | 42.593 | 54 | 30 | 1 | 43 | 96 | 321 | 373 | 2.46e-11 | 60.8 |
MS.gene94889.t1 | AT1G12760 | 32.673 | 101 | 63 | 3 | 1 | 101 | 311 | 406 | 2.59e-11 | 60.8 |
MS.gene94889.t1 | AT1G12760 | 32.673 | 101 | 63 | 3 | 1 | 101 | 240 | 335 | 2.66e-11 | 60.8 |
MS.gene94889.t1 | AT2G46493 | 48.837 | 43 | 22 | 0 | 47 | 89 | 138 | 180 | 2.93e-11 | 59.3 |
MS.gene94889.t1 | AT5G41400 | 29.268 | 123 | 74 | 5 | 4 | 119 | 60 | 176 | 4.08e-11 | 58.5 |
MS.gene94889.t1 | AT3G61460 | 35.165 | 91 | 47 | 4 | 27 | 113 | 71 | 153 | 4.11e-11 | 58.5 |
MS.gene94889.t1 | AT3G43430 | 43.056 | 72 | 29 | 2 | 47 | 109 | 83 | 151 | 4.66e-11 | 58.2 |
MS.gene94889.t1 | AT3G13430 | 35.955 | 89 | 51 | 3 | 24 | 112 | 206 | 288 | 4.68e-11 | 60.1 |
MS.gene94889.t1 | AT3G13430 | 35.955 | 89 | 51 | 3 | 24 | 112 | 206 | 288 | 4.68e-11 | 60.1 |
MS.gene94889.t1 | AT3G13430 | 35.955 | 89 | 51 | 3 | 24 | 112 | 206 | 288 | 4.68e-11 | 60.1 |
MS.gene94889.t1 | AT3G13430 | 35.955 | 89 | 51 | 3 | 24 | 112 | 206 | 288 | 4.68e-11 | 60.1 |
MS.gene94889.t1 | AT4G35480 | 41.176 | 51 | 30 | 0 | 45 | 95 | 111 | 161 | 4.99e-11 | 58.9 |
MS.gene94889.t1 | AT4G30370 | 39.130 | 69 | 41 | 1 | 22 | 89 | 89 | 157 | 6.10e-11 | 58.2 |
MS.gene94889.t1 | AT3G19140 | 33.824 | 68 | 45 | 0 | 22 | 89 | 54 | 121 | 9.40e-11 | 57.0 |
MS.gene94889.t1 | AT2G46495 | 43.636 | 55 | 31 | 0 | 44 | 98 | 289 | 343 | 9.46e-11 | 59.3 |
Find 29 sgRNAs with CRISPR-Local
Find 160 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CTTTCATTGTACACAATAAT+AGG | 0.258860 | 4.1:+70330270 | None:intergenic |
ACATGAGCTGCATTGATCTT+TGG | 0.262415 | 4.1:-70329332 | MS.gene94889:CDS |
CAGATGTTCAGTATGTCTTT+TGG | 0.268291 | 4.1:-70329409 | MS.gene94889:CDS |
AATCTCATTTACCTGCATTT+CGG | 0.355868 | 4.1:+70329236 | None:intergenic |
ATCTGTTGAAGTCTGTCTTC+TGG | 0.366304 | 4.1:+70329378 | None:intergenic |
CACCATTTCTTCATTGCTTG+TGG | 0.400945 | 4.1:+70328734 | None:intergenic |
CTCAAGATCTACTAGACATC+TGG | 0.415399 | 4.1:-70328667 | MS.gene94889:CDS |
GGCCACAAGCAATGAAGAAA+TGG | 0.443622 | 4.1:-70328736 | MS.gene94889:CDS |
AAGATTTCGCAGTAGGTAGC+AGG | 0.450031 | 4.1:+70329271 | None:intergenic |
AAGCGGGCAGGTACTGTGGC+TGG | 0.454573 | 4.1:+70329305 | None:intergenic |
GCAGGGACAAACGGCAAAGC+GGG | 0.470240 | 4.1:+70329289 | None:intergenic |
AGTGTCATTCAAAATGTCTC+AGG | 0.493617 | 4.1:-70328639 | MS.gene94889:CDS |
GGACAAACGGCAAAGCGGGC+AGG | 0.497618 | 4.1:+70329293 | None:intergenic |
GACAGAAATATCCGAAATGC+AGG | 0.518126 | 4.1:-70329247 | MS.gene94889:intron |
CAATGAAGAAACACTAGCCA+TGG | 0.536533 | 4.1:-70328700 | MS.gene94889:CDS |
GTTGAAGTCTGTCTTCTGGT+TGG | 0.538288 | 4.1:+70329382 | None:intergenic |
CAGTAGGTAGCAGGGACAAA+CGG | 0.546013 | 4.1:+70329280 | None:intergenic |
TGGATTACTTACAGTGGAGG+TGG | 0.555629 | 4.1:+70331254 | None:intergenic |
TCTGTCGAAGATTTCGCAGT+AGG | 0.564091 | 4.1:+70329264 | None:intergenic |
GGCAAAGCGGGCAGGTACTG+TGG | 0.568120 | 4.1:+70329301 | None:intergenic |
TGCAGCTCATGTGAAATGTA+TGG | 0.585874 | 4.1:+70329343 | None:intergenic |
TGAAATGTATGGCCGCATGC+AGG | 0.599774 | 4.1:+70329354 | None:intergenic |
TCTTGAGTCGGAGAATTCCA+TGG | 0.615713 | 4.1:+70328683 | None:intergenic |
AGATTTCGCAGTAGGTAGCA+GGG | 0.635983 | 4.1:+70329272 | None:intergenic |
AGCAGGGACAAACGGCAAAG+CGG | 0.651422 | 4.1:+70329288 | None:intergenic |
ATATGGATTACTTACAGTGG+AGG | 0.654754 | 4.1:+70331251 | None:intergenic |
ATGTCTAGTAGATCTTGAGT+CGG | 0.663470 | 4.1:+70328671 | None:intergenic |
TTCACTCTTCAACTTCGACG+CGG | 0.713998 | 4.1:+70328595 | None:intergenic |
CTTCAACAGATACCTGCATG+CGG | 0.743170 | 4.1:-70329366 | MS.gene94889:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TTAATATAAGTTTATAAGTA+GGG | - | chr4.1:70329175-70329194 | MS.gene94889:intron | 10.0% |
!! | CTTAATATAAGTTTATAAGT+AGG | - | chr4.1:70329174-70329193 | MS.gene94889:intron | 15.0% |
!! | TAATATAAGTTTATAAGTAG+GGG | - | chr4.1:70329176-70329195 | MS.gene94889:intron | 15.0% |
!!! | CTTTAGTTCTATATTTATTT+TGG | - | chr4.1:70329558-70329577 | MS.gene94889:intron | 15.0% |
!! | AGAAAACAAAGAAGTTAAAT+TGG | + | chr4.1:70329884-70329903 | None:intergenic | 20.0% |
!! | AGAGTAATAATTTGAGAAAA+TGG | - | chr4.1:70329241-70329260 | MS.gene94889:intron | 20.0% |
!! | ATACAAGTGAAATCATAAAA+AGG | + | chr4.1:70329695-70329714 | None:intergenic | 20.0% |
!! | GATTGAACAATTTATAAATG+AGG | + | chr4.1:70329122-70329141 | None:intergenic | 20.0% |
!! | TACAAGTGAAATCATAAAAA+GGG | + | chr4.1:70329694-70329713 | None:intergenic | 20.0% |
!! | TGCATTAATACTTATTGTAT+TGG | - | chr4.1:70330128-70330147 | MS.gene94889:intron | 20.0% |
!!! | TATACTGATTTTAGAGTAAA+TGG | - | chr4.1:70330742-70330761 | MS.gene94889:intron | 20.0% |
!!! | TTTAGAGTAAATGGTTATTT+TGG | - | chr4.1:70330751-70330770 | MS.gene94889:intron | 20.0% |
!!! | TTTTCTCAAATTATTACTCT+TGG | + | chr4.1:70329241-70329260 | None:intergenic | 20.0% |
! | AAATTATTACTCTTGGACTT+TGG | + | chr4.1:70329234-70329253 | None:intergenic | 25.0% |
! | AATTATTACTCTTGGACTTT+GGG | + | chr4.1:70329233-70329252 | None:intergenic | 25.0% |
! | AGGAAAAAATTGCTATGTTA+TGG | - | chr4.1:70329966-70329985 | MS.gene94889:intron | 25.0% |
! | CGTTGAAAATTATAAATGAG+AGG | + | chr4.1:70329074-70329093 | None:intergenic | 25.0% |
! | CTATCATATTAACACATGTT+AGG | + | chr4.1:70329725-70329744 | None:intergenic | 25.0% |
! | CTTTCATTGTACACAATAAT+AGG | + | chr4.1:70329626-70329645 | None:intergenic | 25.0% |
! | TCATCTATTGCTTAGAAAAT+TGG | + | chr4.1:70329146-70329165 | None:intergenic | 25.0% |
! | TGGAAATAAGCAACAATTTA+TGG | - | chr4.1:70330235-70330254 | MS.gene94889:intron | 25.0% |
!! | CATTGAACAAACAATCATTT+TGG | + | chr4.1:70330921-70330940 | None:intergenic | 25.0% |
!! | GTTTTATGAATCCAATTGAA+GGG | + | chr4.1:70330352-70330371 | None:intergenic | 25.0% |
!!! | AGTTTTATGAATCCAATTGA+AGG | + | chr4.1:70330353-70330372 | None:intergenic | 25.0% |
AAATTGCTATGTTATGGAGT+TGG | - | chr4.1:70329972-70329991 | MS.gene94889:intron | 30.0% | |
AATCTCATTTACCTGCATTT+CGG | + | chr4.1:70330660-70330679 | None:intergenic | 30.0% | |
AATTGCTATGTTATGGAGTT+GGG | - | chr4.1:70329973-70329992 | MS.gene94889:intron | 30.0% | |
AGGAATTATCATGAACACAA+AGG | + | chr4.1:70329481-70329500 | None:intergenic | 30.0% | |
ATAATTCCTGTTATGCTACA+TGG | - | chr4.1:70329492-70329511 | MS.gene94889:intron | 30.0% | |
ATTATTCCATGTAGCATAAC+AGG | + | chr4.1:70329501-70329520 | None:intergenic | 30.0% | |
CATTGAGGTTAAGTTAAAAC+TGG | - | chr4.1:70329522-70329541 | MS.gene94889:intron | 30.0% | |
CGTGATTACATAATTGATCA+TGG | - | chr4.1:70330945-70330964 | MS.gene94889:intron | 30.0% | |
CTTATACCATACTAGACTTT+GGG | + | chr4.1:70328858-70328877 | None:intergenic | 30.0% | |
GAGTTATCAATACATAAGTG+TGG | + | chr4.1:70330688-70330707 | None:intergenic | 30.0% | |
GATGTTATGCTATATGCTTT+AGG | - | chr4.1:70329941-70329960 | MS.gene94889:intron | 30.0% | |
TAAGTCACATTCTAAATGCT+TGG | - | chr4.1:70328924-70328943 | MS.gene94889:intron | 30.0% | |
TCTTATACCATACTAGACTT+TGG | + | chr4.1:70328859-70328878 | None:intergenic | 30.0% | |
TGAACATAAGTTTATAAGCG+TGG | - | chr4.1:70328781-70328800 | MS.gene94889:intron | 30.0% | |
TTTAGATCATTGATCATGCA+TGG | - | chr4.1:70331099-70331118 | MS.gene94889:intron | 30.0% | |
! | AATTGTTGCTTATTTCCACA+AGG | + | chr4.1:70330233-70330252 | None:intergenic | 30.0% |
! | ATAAGATCTAGTTTCTCAGA+GGG | + | chr4.1:70329766-70329785 | None:intergenic | 30.0% |
! | ATTTCATTTTGGATCCACAT+TGG | + | chr4.1:70329804-70329823 | None:intergenic | 30.0% |
! | TGATACTCTCATAGTCTTTT+GGG | - | chr4.1:70330382-70330401 | MS.gene94889:intron | 30.0% |
!!! | ACTGTTCTCATAAGCTTTTT+TGG | - | chr4.1:70330204-70330223 | MS.gene94889:intron | 30.0% |
!!! | AGCATTGACATTTTAGGATA+TGG | + | chr4.1:70328662-70328681 | None:intergenic | 30.0% |
!!! | CAACATAGCATTGACATTTT+AGG | + | chr4.1:70328668-70328687 | None:intergenic | 30.0% |
!!! | CAGTTTTAACTTAACCTCAA+TGG | + | chr4.1:70329524-70329543 | None:intergenic | 30.0% |
!!! | CTATATTTATTTTGGCAGTC+TGG | - | chr4.1:70329566-70329585 | MS.gene94889:intron | 30.0% |
AGAACTACAACATACCAATG+TGG | - | chr4.1:70329787-70329806 | MS.gene94889:intron | 35.0% | |
ATGCAAACATACCCTTCAAT+TGG | - | chr4.1:70330338-70330357 | MS.gene94889:intron | 35.0% | |
ATGTCTAGTAGATCTTGAGT+CGG | + | chr4.1:70331225-70331244 | None:intergenic | 35.0% | |
ATTCTAAATGCTTGGTTGGT+TGG | - | chr4.1:70328932-70328951 | MS.gene94889:intron | 35.0% | |
CATAAATGCATTGAGCACAT+AGG | + | chr4.1:70329442-70329461 | None:intergenic | 35.0% | |
CCTGTGTTGTAGCAAATTTA+GGG | - | chr4.1:70329825-70329844 | MS.gene94889:intron | 35.0% | |
CTAAAAACGACGAGAAACTT+AGG | - | chr4.1:70329336-70329355 | MS.gene94889:CDS | 35.0% | |
CTACATGGAATAATCCATTG+AGG | - | chr4.1:70329507-70329526 | MS.gene94889:intron | 35.0% | |
GAAACTTAGGTGTGAAATTC+TGG | - | chr4.1:70329349-70329368 | MS.gene94889:CDS | 35.0% | |
GTGTCTTTCGTAAGTTAGTT+TGG | + | chr4.1:70330795-70330814 | None:intergenic | 35.0% | |
GTTTGACCACATGCTATATA+AGG | - | chr4.1:70328894-70328913 | MS.gene94889:intron | 35.0% | |
TAACTCAACACCCATAAAAC+CGG | + | chr4.1:70328828-70328847 | None:intergenic | 35.0% | |
TCAAAGATACACAGTGAGTT+CGG | - | chr4.1:70329654-70329673 | MS.gene94889:intron | 35.0% | |
TCACATTCTAAATGCTTGGT+TGG | - | chr4.1:70328928-70328947 | MS.gene94889:intron | 35.0% | |
! | ACAACACAGGCATTTCATTT+TGG | + | chr4.1:70329815-70329834 | None:intergenic | 35.0% |
! | AGGATATGGATTACTTACAG+TGG | + | chr4.1:70328648-70328667 | None:intergenic | 35.0% |
! | AGTGTCATTCAAAATGTCTC+AGG | - | chr4.1:70331254-70331273 | MS.gene94889:intron | 35.0% |
! | ATATGGATTACTTACAGTGG+AGG | + | chr4.1:70328645-70328664 | None:intergenic | 35.0% |
! | ATTGAAGGGTATGTTTGCAT+TGG | + | chr4.1:70330338-70330357 | None:intergenic | 35.0% |
! | CAGATGTTCAGTATGTCTTT+TGG | - | chr4.1:70330484-70330503 | MS.gene94889:intron | 35.0% |
! | CATTTGTTGACATGCACTAA+TGG | - | chr4.1:70330045-70330064 | MS.gene94889:intron | 35.0% |
! | CTGATACTCTCATAGTCTTT+TGG | - | chr4.1:70330381-70330400 | MS.gene94889:intron | 35.0% |
! | GAACATCTGCAACAATCTTT+TGG | + | chr4.1:70330473-70330492 | None:intergenic | 35.0% |
! | GACAGATTTTCTGATGTAGA+AGG | + | chr4.1:70330018-70330037 | None:intergenic | 35.0% |
! | GATAAGATCTAGTTTCTCAG+AGG | + | chr4.1:70329767-70329786 | None:intergenic | 35.0% |
! | GATACTCTCATAGTCTTTTG+GGG | - | chr4.1:70330383-70330402 | MS.gene94889:intron | 35.0% |
! | GTTTTATCTGCATTCAGTTG+GGG | + | chr4.1:70329420-70329439 | None:intergenic | 35.0% |
! | TGAGACATTTTGAATGACAC+TGG | + | chr4.1:70331255-70331274 | None:intergenic | 35.0% |
! | TTCTAAATGCTTGGTTGGTT+GGG | - | chr4.1:70328933-70328952 | MS.gene94889:intron | 35.0% |
! | TTGTAGCAAATTTAGGGCTA+AGG | - | chr4.1:70329831-70329850 | MS.gene94889:intron | 35.0% |
!! | AGGTTTTATCTGCATTCAGT+TGG | + | chr4.1:70329422-70329441 | None:intergenic | 35.0% |
!! | CATTTTAGTCCAAAACCTGA+AGG | - | chr4.1:70329027-70329046 | MS.gene94889:intron | 35.0% |
!! | GGTTTTATCTGCATTCAGTT+GGG | + | chr4.1:70329421-70329440 | None:intergenic | 35.0% |
!! | TATGCTATATGCTTTAGGAC+AGG | - | chr4.1:70329946-70329965 | MS.gene94889:intron | 35.0% |
!!! | TTATTTTGGCAGTCTGGTTT+GGG | - | chr4.1:70329572-70329591 | MS.gene94889:intron | 35.0% |
!!! | TTTATTTTGGCAGTCTGGTT+TGG | - | chr4.1:70329571-70329590 | MS.gene94889:intron | 35.0% |
ATCTGTTGAAGTCTGTCTTC+TGG | + | chr4.1:70330518-70330537 | None:intergenic | 40.0% | |
ATGAGGACAAAAGAAGAGTG+AGG | + | chr4.1:70329105-70329124 | None:intergenic | 40.0% | |
ATTACTCTTGGACTTTGGGT+TGG | + | chr4.1:70329229-70329248 | None:intergenic | 40.0% | |
CAATGAAGAAACACTAGCCA+TGG | - | chr4.1:70331193-70331212 | MS.gene94889:intron | 40.0% | |
CACCATTTCTTCATTGCTTG+TGG | + | chr4.1:70331162-70331181 | None:intergenic | 40.0% | |
CTCAAGATCTACTAGACATC+TGG | - | chr4.1:70331226-70331245 | MS.gene94889:intron | 40.0% | |
GACAGAAATATCCGAAATGC+AGG | - | chr4.1:70330646-70330665 | MS.gene94889:intron | 40.0% | |
GATCGCGTCTCATACATTTA+AGG | - | chr4.1:70330894-70330913 | MS.gene94889:intron | 40.0% | |
GATGTAGAAGGATTTCAACC+AGG | + | chr4.1:70330006-70330025 | None:intergenic | 40.0% | |
GCAAACACTGTTACATGAGT+AGG | - | chr4.1:70328718-70328737 | MS.gene94889:CDS | 40.0% | |
GCCTGTGTTGTAGCAAATTT+AGG | - | chr4.1:70329824-70329843 | MS.gene94889:intron | 40.0% | |
GTGTGACCTTATATAGCATG+TGG | + | chr4.1:70328903-70328922 | None:intergenic | 40.0% | |
TGACAAGTGAAACTCTCTGA+TGG | - | chr4.1:70331133-70331152 | MS.gene94889:intron | 40.0% | |
TGCAGCTCATGTGAAATGTA+TGG | + | chr4.1:70330553-70330572 | None:intergenic | 40.0% | |
! | AAGGCATCAGGTCTAGTTTA+TGG | - | chr4.1:70329046-70329065 | MS.gene94889:intron | 40.0% |
! | ACATGAGCTGCATTGATCTT+TGG | - | chr4.1:70330561-70330580 | MS.gene94889:intron | 40.0% |
! | ACGTCTTCAATCTGAAGTGT+TGG | - | chr4.1:70329291-70329310 | MS.gene94889:CDS | 40.0% |
! | AGCTTATGAACTAGCTTAGG+TGG | - | chr4.1:70330098-70330117 | MS.gene94889:intron | 40.0% |
! | AGGCATCAGGTCTAGTTTAT+GGG | - | chr4.1:70329047-70329066 | MS.gene94889:intron | 40.0% |
! | CACAGCTTATGAACTAGCTT+AGG | - | chr4.1:70330095-70330114 | MS.gene94889:intron | 40.0% |
! | CTGCAACAATCTTTTGGATG+AGG | + | chr4.1:70330467-70330486 | None:intergenic | 40.0% |
! | TACCATACTAGACTTTGGGA+TGG | + | chr4.1:70328854-70328873 | None:intergenic | 40.0% |
! | TTACTCTTGGACTTTGGGTT+GGG | + | chr4.1:70329228-70329247 | None:intergenic | 40.0% |
! | TTTTGGTCACTAAGTGAGTG+AGG | - | chr4.1:70330768-70330787 | MS.gene94889:intron | 40.0% |
!! | ACCATACTAGACTTTGGGAT+GGG | + | chr4.1:70328853-70328872 | None:intergenic | 40.0% |
!! | ACCTTACAAGCCGGTTTTAT+GGG | - | chr4.1:70328815-70328834 | MS.gene94889:intron | 40.0% |
!! | CACAGTGAGTTCGGTTTTAT+TGG | - | chr4.1:70329663-70329682 | MS.gene94889:intron | 40.0% |
!! | CCCTAAATTTGCTACAACAC+AGG | + | chr4.1:70329828-70329847 | None:intergenic | 40.0% |
!!! | AAGCTTTTTTGGAGACCTTG+TGG | - | chr4.1:70330215-70330234 | MS.gene94889:intron | 40.0% |
!!! | GGTTTTATGGGTGTTGAGTT+AGG | - | chr4.1:70328827-70328846 | MS.gene94889:intron | 40.0% |
AAACTAGACCTGATGCCTTC+AGG | + | chr4.1:70329045-70329064 | None:intergenic | 45.0% | |
AAGATTTCGCAGTAGGTAGC+AGG | + | chr4.1:70330625-70330644 | None:intergenic | 45.0% | |
ACTGTTACATGAGTAGGCAC+TGG | - | chr4.1:70328724-70328743 | MS.gene94889:CDS | 45.0% | |
AGATTTCGCAGTAGGTAGCA+GGG | + | chr4.1:70330624-70330643 | None:intergenic | 45.0% | |
AGGAAAGCGAAAGAGAACAC+AGG | + | chr4.1:70330447-70330466 | None:intergenic | 45.0% | |
CAAGTGAAACTCTCTGATGG+AGG | - | chr4.1:70331136-70331155 | MS.gene94889:intron | 45.0% | |
CGACTACTTGGTAGAGCTTA+TGG | + | chr4.1:70330279-70330298 | None:intergenic | 45.0% | |
CTTCAACAGATACCTGCATG+CGG | - | chr4.1:70330527-70330546 | MS.gene94889:intron | 45.0% | |
GAAATCCTCACCTGACAAGT+TGG | - | chr4.1:70329198-70329217 | MS.gene94889:intron | 45.0% | |
GATGTCAAACTAGACCTGTG+TGG | + | chr4.1:70329006-70329025 | None:intergenic | 45.0% | |
GGCCACAAGCAATGAAGAAA+TGG | - | chr4.1:70331157-70331176 | MS.gene94889:intron | 45.0% | |
GTTGAAGTCTGTCTTCTGGT+TGG | + | chr4.1:70330514-70330533 | None:intergenic | 45.0% | |
TCTGTCGAAGATTTCGCAGT+AGG | + | chr4.1:70330632-70330651 | None:intergenic | 45.0% | |
TCTTGAGTCGGAGAATTCCA+TGG | + | chr4.1:70331213-70331232 | None:intergenic | 45.0% | |
TGAACACTTGTGCGACTACT+TGG | + | chr4.1:70330291-70330310 | None:intergenic | 45.0% | |
TGGATTACTTACAGTGGAGG+TGG | + | chr4.1:70328642-70328661 | None:intergenic | 45.0% | |
!! | ACCCATAAAACCGGCTTGTA+AGG | + | chr4.1:70328819-70328838 | None:intergenic | 45.0% |
!! | CACCTTACAAGCCGGTTTTA+TGG | - | chr4.1:70328814-70328833 | MS.gene94889:intron | 45.0% |
!! | CATAAAACCGGCTTGTAAGG+TGG | + | chr4.1:70328816-70328835 | None:intergenic | 45.0% |
!! | TATAAATATTGAATATAATA+TGG | + | chr4.1:70331049-70331068 | None:intergenic | 5.0% |
ATGGAGTTGGGCACTTATCC+TGG | - | chr4.1:70329985-70330004 | MS.gene94889:intron | 50.0% | |
CAGTAGGTAGCAGGGACAAA+CGG | + | chr4.1:70330616-70330635 | None:intergenic | 50.0% | |
GACAACCAACTTGTCAGGTG+AGG | + | chr4.1:70329206-70329225 | None:intergenic | 50.0% | |
GCCCATCCCAAAGTCTAGTA+TGG | - | chr4.1:70328849-70328868 | MS.gene94889:intron | 50.0% | |
GTTGGGACAACCAACTTGTC+AGG | + | chr4.1:70329211-70329230 | None:intergenic | 50.0% | |
TCAGTGTCCACCTTACAAGC+CGG | - | chr4.1:70328806-70328825 | MS.gene94889:intron | 50.0% | |
TGAAATGTATGGCCGCATGC+AGG | + | chr4.1:70330542-70330561 | None:intergenic | 50.0% | |
! | CTTGGTTGGTTGGGTAACGA+GGG | - | chr4.1:70328942-70328961 | MS.gene94889:intron | 50.0% |
! | TGGTTGCTTTGAGCCGAATG+TGG | + | chr4.1:70328986-70329005 | None:intergenic | 50.0% |
! | TTGGTTGGTTGGGTAACGAG+GGG | - | chr4.1:70328943-70328962 | MS.gene94889:intron | 50.0% |
!! | GACCTGATGCCTTCAGGTTT+TGG | + | chr4.1:70329039-70329058 | None:intergenic | 50.0% |
!! | GTCCAAAACCTGAAGGCATC+AGG | - | chr4.1:70329034-70329053 | MS.gene94889:intron | 50.0% |
AGCAGGGACAAACGGCAAAG+CGG | + | chr4.1:70330608-70330627 | None:intergenic | 55.0% | |
GAATGTGGATGTGTTCCCCC+CGG | + | chr4.1:70328971-70328990 | None:intergenic | 55.0% | |
GGGGGGAACACATCCACATT+CGG | - | chr4.1:70328970-70328989 | MS.gene94889:intron | 55.0% | |
TCGGCTCAAAGCAACCACAC+AGG | - | chr4.1:70328989-70329008 | MS.gene94889:intron | 55.0% | |
! | GCTTGGTTGGTTGGGTAACG+AGG | - | chr4.1:70328941-70328960 | MS.gene94889:intron | 55.0% |
GCAGGGACAAACGGCAAAGC+GGG | + | chr4.1:70330607-70330626 | None:intergenic | 60.0% | |
GGACAAACGGCAAAGCGGGC+AGG | + | chr4.1:70330603-70330622 | None:intergenic | 65.0% | |
GGTTGGGTAACGAGGGGAGC+CGG | - | chr4.1:70328949-70328968 | MS.gene94889:intron | 65.0% | |
GTTGGGTAACGAGGGGAGCC+GGG | - | chr4.1:70328950-70328969 | MS.gene94889:intron | 65.0% | |
TTGGGTAACGAGGGGAGCCG+GGG | - | chr4.1:70328951-70328970 | MS.gene94889:intron | 65.0% | |
! | AAGCGGGCAGGTACTGTGGC+TGG | + | chr4.1:70330591-70330610 | None:intergenic | 65.0% |
! | GGCAAAGCGGGCAGGTACTG+TGG | + | chr4.1:70330595-70330614 | None:intergenic | 65.0% |
TGGGTAACGAGGGGAGCCGG+GGG | - | chr4.1:70328952-70328971 | MS.gene94889:intron | 70.0% | |
GGGTAACGAGGGGAGCCGGG+GGG | - | chr4.1:70328953-70328972 | MS.gene94889:intron | 75.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr4.1 | gene | 70328596 | 70331319 | 70328596 | ID=MS.gene94889 |
chr4.1 | mRNA | 70328596 | 70331319 | 70328596 | ID=MS.gene94889.t1;Parent=MS.gene94889 |
chr4.1 | exon | 70331266 | 70331319 | 70331266 | ID=MS.gene94889.t1.exon1;Parent=MS.gene94889.t1 |
chr4.1 | CDS | 70331266 | 70331319 | 70331266 | ID=cds.MS.gene94889.t1;Parent=MS.gene94889.t1 |
chr4.1 | exon | 70330249 | 70330331 | 70330249 | ID=MS.gene94889.t1.exon2;Parent=MS.gene94889.t1 |
chr4.1 | CDS | 70330249 | 70330331 | 70330249 | ID=cds.MS.gene94889.t1;Parent=MS.gene94889.t1 |
chr4.1 | exon | 70329248 | 70329428 | 70329248 | ID=MS.gene94889.t1.exon3;Parent=MS.gene94889.t1 |
chr4.1 | CDS | 70329248 | 70329428 | 70329248 | ID=cds.MS.gene94889.t1;Parent=MS.gene94889.t1 |
chr4.1 | exon | 70328596 | 70328757 | 70328596 | ID=MS.gene94889.t1.exon4;Parent=MS.gene94889.t1 |
chr4.1 | CDS | 70328596 | 70328757 | 70328596 | ID=cds.MS.gene94889.t1;Parent=MS.gene94889.t1 |
Gene Sequence |
Protein sequence |