AlfalfaGEDB | MS.gene70256

M. sativa cultivar XinJiangDaYe / MS.gene70256

KEGG: K19040
GO: -
PFAM: PF13639.9

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene70256.t1	XP_003630206.2	78.6	229	38	2	1	229	1	218	6.90E-94	353.6

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene70256.t1	Q6NML0	43.7	215	102	4	21	228	23	225	6.8e-42	172.2

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene70256.t1	G7LD43	78.6	229	38	2	1	229	1	218	5.0e-94	353.6

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR

PPI:

Gene1	Gene2	Type
MS.gene70256	MS.gene030655	PPI
MS.gene70256	MS.gene31002	PPI
MS.gene70256	MS.gene030652	PPI
MS.gene70256	MS.gene70254	PPI
MS.gene70256	MS.gene28428	PPI
MS.gene70256	MS.gene030660	PPI
MS.gene70256	MS.gene28427	PPI
MS.gene70256	MS.gene030654	PPI
MS.gene70256	MS.gene030653	PPI
MS.gene70256	MS.gene58107	PPI
MS.gene70256	MS.gene70253	PPI
MS.gene70256	MS.gene58110	PPI
MS.gene70256	MS.gene28431	PPI
MS.gene70256	MS.gene030656	PPI
MS.gene049319	MS.gene70256	PPI
MS.gene70256	MS.gene58104	PPI
MS.gene70256	MS.gene06444	PPI
MS.gene70256	MS.gene70257	PPI
MS.gene70256	MS.gene030658	PPI
MS.gene58111	MS.gene70256	PPI
MS.gene70256	MS.gene58105	PPI
MS.gene70256	MS.gene030657	PPI
MS.gene70256	MS.gene70255	PPI
MS.gene70256	MS.gene049319	PPI
MS.gene70256	MS.gene030659	PPI
MS.gene70256	MS.gene94889	PPI
MS.gene70256	MS.gene28429	PPI
MS.gene70256	MS.gene58106	PPI
MS.gene70256	MS.gene013346	PPI
MS.gene70256	MS.gene28425	PPI
MS.gene70256	MS.gene88015	PPI
MS.gene70256	MS.gene70250	PPI
MS.gene70256	MS.gene58111	PPI
MS.gene70256	MS.gene48772	PPI
MS.gene70256	MS.gene28424	PPI
MS.gene70256	MS.gene030651	PPI
MS.gene70256	MS.gene76770	PPI
MS.gene030658	MS.gene70256	PPI
MS.gene70256	MS.gene28426	PPI
MS.gene70256	MS.gene70249	PPI
MS.gene70256	MS.gene28430	PPI
MS.gene70256	MS.gene58108	PPI
MS.gene70256	MS.gene58109	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene70256.t1	MTR_8g092840	87.336	229	28	1	1	229	1	228	8.61e-137	383
MS.gene70256.t1	MTR_8g092960	82.969	229	28	2	1	229	1	218	1.09e-129	365
MS.gene70256.t1	MTR_8g092990	85.841	226	32	0	1	226	1	226	2.59e-122	347
MS.gene70256.t1	MTR_8g093010	79.386	228	35	5	1	226	1	218	8.57e-120	340
MS.gene70256.t1	MTR_8g092930	77.434	226	49	2	1	226	1	224	2.66e-111	318
MS.gene70256.t1	MTR_8g092985	78.873	213	42	1	1	213	1	210	4.15e-111	317
MS.gene70256.t1	MTR_8g092970	76.106	226	44	2	1	226	1	216	4.01e-110	315
MS.gene70256.t1	MTR_3g095560	62.661	233	73	5	1	226	1	226	6.61e-92	270
MS.gene70256.t1	MTR_3g094000	51.471	136	60	2	54	188	36	166	1.34e-39	134
MS.gene70256.t1	MTR_7g073200	46.584	161	67	5	47	199	19	168	1.19e-38	132
MS.gene70256.t1	MTR_5g024730	48.227	141	61	5	55	192	26	157	1.17e-33	120
MS.gene70256.t1	MTR_3g116000	47.586	145	67	5	59	201	26	163	1.75e-33	119
MS.gene70256.t1	MTR_8g073120	46.970	132	57	4	55	183	19	140	1.18e-30	112
MS.gene70256.t1	MTR_4g094725	42.400	125	66	2	61	184	30	149	9.40e-28	103
MS.gene70256.t1	MTR_2g035800	38.760	129	73	2	56	184	23	145	5.61e-27	102
MS.gene70256.t1	MTR_7g113800	35.099	151	76	5	46	187	29	166	2.88e-20	88.2
MS.gene70256.t1	MTR_3g071300	33.835	133	82	2	57	186	22	151	2.23e-19	82.4
MS.gene70256.t1	MTR_3g110190	34.848	132	76	4	62	189	15	140	2.71e-19	85.5
MS.gene70256.t1	MTR_1g082550	32.680	153	84	4	43	187	32	173	4.17e-19	85.1
MS.gene70256.t1	MTR_8g023400	45.570	79	40	2	114	191	92	168	1.60e-18	82.8
MS.gene70256.t1	MTR_1g043410	28.030	132	86	2	62	184	35	166	2.48e-18	82.4
MS.gene70256.t1	MTR_1g100737	46.988	83	40	1	112	190	90	172	4.07e-18	79.3
MS.gene70256.t1	MTR_7g117540	31.852	135	90	1	55	189	17	149	4.36e-18	81.3
MS.gene70256.t1	MTR_4g120270	43.836	73	38	1	111	183	77	146	6.15e-18	80.5
MS.gene70256.t1	MTR_5g064980	33.333	126	79	2	63	186	60	182	7.75e-18	81.6
MS.gene70256.t1	MTR_6g055030	38.655	119	64	3	67	183	57	168	1.29e-17	80.5
MS.gene70256.t1	MTR_6g087150	33.577	137	90	1	48	184	27	162	2.05e-17	80.5
MS.gene70256.t1	MTR_5g082940	46.053	76	40	1	112	186	73	148	4.57e-17	76.3
MS.gene70256.t1	MTR_3g099650	31.343	134	84	3	57	187	54	182	5.16e-17	79.3
MS.gene70256.t1	MTR_4g030070	37.500	88	53	1	104	191	75	160	9.92e-17	76.6
MS.gene70256.t1	MTR_7g116220	40.000	80	46	1	111	188	67	146	1.39e-16	75.1
MS.gene70256.t1	MTR_8g066780	32.317	164	91	4	69	220	58	213	1.83e-16	77.4
MS.gene70256.t1	MTR_4g063070	41.975	81	46	1	104	183	298	378	2.40e-16	77.4
MS.gene70256.t1	MTR_2g096350	60.417	48	19	0	136	183	130	177	2.69e-16	75.1
MS.gene70256.t1	MTR_4g056590	40.000	80	43	2	111	190	97	171	2.92e-16	74.7
MS.gene70256.t1	MTR_1g492830	31.818	110	69	1	113	222	60	163	5.63e-16	74.3
MS.gene70256.t1	MTR_5g071930	48.684	76	35	2	113	188	65	136	5.64e-16	73.9
MS.gene70256.t1	MTR_2g436100	30.573	157	87	5	42	183	12	161	5.98e-16	75.5
MS.gene70256.t1	MTR_3g464780	42.308	78	42	1	113	187	101	178	8.45e-16	74.3
MS.gene70256.t1	MTR_4g129420	43.038	79	45	0	109	187	112	190	8.81e-16	76.3
MS.gene70256.t1	MTR_5g064990	29.927	137	92	3	53	187	55	189	1.16e-15	75.5
MS.gene70256.t1	MTR_3g078450	34.532	139	80	4	89	224	51	181	1.99e-15	72.8
MS.gene70256.t1	MTR_5g030010	39.506	81	48	1	107	187	115	194	3.09e-15	73.9
MS.gene70256.t1	MTR_7g076250	38.889	72	44	0	112	183	61	132	4.32e-15	71.2
MS.gene70256.t1	MTR_3g114500	32.787	122	71	4	64	183	1	113	4.65e-15	69.7
MS.gene70256.t1	MTR_8g089880	37.500	80	49	1	114	193	127	205	5.64e-15	72.4
MS.gene70256.t1	MTR_7g108855	39.362	94	47	3	115	199	67	159	7.97e-15	70.9
MS.gene70256.t1	MTR_2g055790	34.959	123	69	3	66	187	34	146	8.92e-15	70.5
MS.gene70256.t1	MTR_5g064890	31.034	116	77	2	74	187	86	200	9.59e-15	72.4
MS.gene70256.t1	MTR_3g078470	37.113	97	59	2	91	186	54	149	1.24e-14	70.5
MS.gene70256.t1	MTR_7g116180	38.667	75	44	1	114	186	67	141	1.38e-14	69.7
MS.gene70256.t1	MTR_4g093830	42.857	70	39	1	114	183	126	194	1.46e-14	72.0
MS.gene70256.t1	MTR_1g070425	38.667	75	44	1	114	186	68	142	1.65e-14	69.7
MS.gene70256.t1	MTR_1g070140	38.961	77	45	2	108	183	97	172	2.49e-14	71.2
MS.gene70256.t1	MTR_3g100400	40.278	72	42	1	112	183	128	198	3.40e-14	71.2
MS.gene70256.t1	MTR_2g009310	60.000	45	18	0	139	183	159	203	3.42e-14	71.2
MS.gene70256.t1	MTR_5g026720	29.197	137	83	4	54	183	6	135	3.55e-14	68.2
MS.gene70256.t1	MTR_6g007737	31.111	135	82	3	62	186	71	204	4.19e-14	70.9
MS.gene70256.t1	MTR_3g091620	43.243	74	41	1	114	187	101	173	6.56e-14	70.1
MS.gene70256.t1	MTR_5g026730	28.358	134	78	4	59	183	12	136	8.50e-14	67.4
MS.gene70256.t1	MTR_5g076990	34.646	127	77	3	62	183	23	148	1.00e-13	69.3
MS.gene70256.t1	MTR_2g090905	41.558	77	40	1	112	183	37	113	1.67e-13	65.5
MS.gene70256.t1	MTR_5g066250	38.889	72	43	1	112	183	132	202	1.96e-13	68.9
MS.gene70256.t1	MTR_1g074190	30.081	123	72	3	81	191	61	181	2.09e-13	68.6
MS.gene70256.t1	MTR_3g012550	26.036	169	110	5	53	219	21	176	2.13e-13	66.6
MS.gene70256.t1	MTR_5g034790	40.260	77	45	1	110	186	112	187	2.40e-13	68.6
MS.gene70256.t1	MTR_3g086700	36.364	99	57	2	94	186	22	120	2.70e-13	66.2
MS.gene70256.t1	MTR_4g108830	34.343	99	61	2	87	184	122	217	2.88e-13	67.0
MS.gene70256.t1	MTR_8g063660	31.159	138	83	3	62	188	5	141	2.88e-13	68.2
MS.gene70256.t1	MTR_1g026070	28.333	120	79	2	64	183	1	113	3.04e-13	65.1
MS.gene70256.t1	MTR_8g099495	39.744	78	45	2	107	183	313	389	3.40e-13	68.2
MS.gene70256.t1	MTR_1g056350	37.662	77	44	2	110	183	70	145	3.90e-13	65.5
MS.gene70256.t1	MTR_2g041200	50.909	55	27	0	129	183	97	151	4.41e-13	65.5
MS.gene70256.t1	MTR_2g090950	38.462	78	43	1	111	183	88	165	5.13e-13	66.6
MS.gene70256.t1	MTR_3g091200	39.437	71	42	1	114	183	303	373	6.07e-13	67.4
MS.gene70256.t1	MTR_4g106680	39.189	74	44	1	110	183	102	174	6.12e-13	67.0
MS.gene70256.t1	MTR_3g086730	38.750	80	47	1	109	186	41	120	6.32e-13	66.2
MS.gene70256.t1	MTR_5g009190	37.500	80	49	1	105	183	257	336	7.67e-13	67.0
MS.gene70256.t1	MTR_5g009210	37.500	80	49	1	105	183	278	357	7.73e-13	67.0
MS.gene70256.t1	MTR_8g074900	40.000	75	40	1	112	186	156	225	8.21e-13	65.9
MS.gene70256.t1	MTR_6g007670	38.961	77	42	2	110	183	1	75	1.07e-12	65.9
MS.gene70256.t1	MTR_8g028465	37.143	70	41	1	114	183	90	156	1.21e-12	65.1
MS.gene70256.t1	MTR_4g108830	34.021	97	60	2	89	184	96	189	1.76e-12	64.3
MS.gene70256.t1	MTR_5g092790	42.466	73	39	2	113	183	156	227	2.46e-12	64.7
MS.gene70256.t1	MTR_5g009200	39.437	71	42	1	114	183	322	392	3.34e-12	65.5
MS.gene70256.t1	MTR_7g116200	32.836	134	68	5	65	183	9	135	3.43e-12	63.2
MS.gene70256.t1	MTR_7g059360	43.939	66	36	1	120	184	136	201	3.53e-12	64.3
MS.gene70256.t1	MTR_4g022410	29.710	138	82	4	62	199	49	171	5.35e-12	62.8
MS.gene70256.t1	MTR_7g079290	40.984	61	36	0	138	198	152	212	5.64e-12	63.2
MS.gene70256.t1	MTR_5g022920	36.842	76	47	1	112	186	159	234	5.86e-12	63.5
MS.gene70256.t1	MTR_8g019710	57.778	45	19	0	139	183	52	96	9.20e-12	61.2
MS.gene70256.t1	MTR_8g032690	46.154	52	28	0	141	192	19	70	9.46e-12	60.5
MS.gene70256.t1	MTR_7g079280	35.065	77	49	1	114	189	80	156	9.54e-12	62.0
MS.gene70256.t1	MTR_3g081030	36.250	80	49	1	120	199	100	177	9.68e-12	62.8
MS.gene70256.t1	MTR_6g007680	39.437	71	42	1	113	183	39	108	1.36e-11	61.2
MS.gene70256.t1	MTR_8g066740	32.283	127	80	3	62	183	23	148	2.08e-11	62.8
MS.gene70256.t1	MTR_7g096690	25.362	138	78	5	62	183	14	142	2.18e-11	62.8
MS.gene70256.t1	MTR_8g071815	53.488	43	20	0	141	183	90	132	2.20e-11	60.8
MS.gene70256.t1	MTR_5g092750	60.465	43	17	0	141	183	185	227	2.42e-11	62.0
MS.gene70256.t1	MTR_2g079320	32.432	111	66	2	83	186	96	204	3.13e-11	60.8
MS.gene70256.t1	MTR_8g027745	34.615	78	50	1	107	183	279	356	3.49e-11	62.4
MS.gene70256.t1	MTR_3g087900	46.154	65	30	3	124	187	55	115	3.57e-11	60.1
MS.gene70256.t1	MTR_8g099515	39.437	71	42	1	114	183	309	379	4.32e-11	62.0
MS.gene70256.t1	MTR_4g073810	27.647	170	97	6	34	187	17	176	8.31e-11	59.3

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene70256.t1	AT1G49230	49.309	217	84	4	11	220	17	214	7.99e-63	195
MS.gene70256.t1	AT1G49210	45.498	211	104	4	21	228	23	225	6.59e-56	178
MS.gene70256.t1	AT1G49200	43.602	211	108	4	21	228	24	226	1.63e-54	174
MS.gene70256.t1	AT1G49220	48.295	176	83	3	21	196	23	190	1.24e-53	173
MS.gene70256.t1	AT3G18773	49.711	173	81	4	60	228	50	220	1.40e-51	167
MS.gene70256.t1	AT5G05280	54.198	131	53	2	58	188	37	160	1.16e-42	142
MS.gene70256.t1	AT3G10910	50.000	148	62	4	58	202	29	167	5.36e-40	135
MS.gene70256.t1	AT1G76410	44.056	143	77	2	47	189	13	152	1.65e-35	124
MS.gene70256.t1	AT1G20823	45.865	133	68	2	58	187	26	157	1.25e-34	122
MS.gene70256.t1	AT5G01880	40.107	187	83	6	12	197	1	159	1.57e-28	105
MS.gene70256.t1	AT2G17450	42.222	135	59	4	59	186	25	147	9.44e-28	104
MS.gene70256.t1	AT5G47610	38.636	132	69	3	52	183	30	149	1.97e-26	100
MS.gene70256.t1	AT4G35480	36.782	174	85	5	59	218	23	185	2.96e-26	101
MS.gene70256.t1	AT4G17245	40.299	134	63	3	52	183	27	145	9.20e-25	96.3
MS.gene70256.t1	AT1G22500	34.899	149	91	3	54	199	31	176	4.74e-21	90.5
MS.gene70256.t1	AT4G40070	34.667	150	89	3	65	210	49	193	7.73e-20	86.7
MS.gene70256.t1	AT1G72200	32.919	161	87	5	57	213	58	201	3.39e-19	85.5
MS.gene70256.t1	AT1G72310	48.718	78	38	1	110	187	98	173	3.51e-18	82.0
MS.gene70256.t1	AT2G27940	37.624	101	60	2	100	200	101	198	1.51e-17	79.0
MS.gene70256.t1	AT3G14320	47.887	71	35	1	114	184	63	131	2.04e-17	77.8
MS.gene70256.t1	AT1G53820	44.872	78	39	2	110	186	91	165	2.59e-17	79.3
MS.gene70256.t1	AT2G35000	32.331	133	86	2	59	187	49	181	5.60e-17	79.3
MS.gene70256.t1	AT5G57750	31.496	127	82	2	62	184	40	165	1.22e-16	75.9
MS.gene70256.t1	AT3G05200	46.154	78	40	1	113	188	98	175	1.35e-16	78.2
MS.gene70256.t1	AT1G28040	36.538	104	63	2	83	183	192	295	1.56e-16	77.0
MS.gene70256.t1	AT4G10160	34.127	126	73	3	65	187	25	143	2.03e-16	75.9
MS.gene70256.t1	AT3G16720	39.326	89	51	2	110	198	90	175	2.15e-16	77.0
MS.gene70256.t1	AT4G09120	46.053	76	39	1	113	186	93	168	3.11e-16	76.6
MS.gene70256.t1	AT4G09110	33.058	121	73	2	65	183	51	165	3.56e-16	76.3
MS.gene70256.t1	AT2G46494	29.054	148	99	3	42	183	211	358	3.78e-16	76.6
MS.gene70256.t1	AT1G23980	32.450	151	81	5	54	187	44	190	4.96e-16	76.3
MS.gene70256.t1	AT5G27420	44.444	81	41	2	111	188	92	171	6.61e-16	75.9
MS.gene70256.t1	AT1G04360	30.075	133	81	3	62	183	45	176	9.78e-16	75.5
MS.gene70256.t1	AT2G18650	43.590	78	44	0	110	187	95	172	1.04e-15	75.9
MS.gene70256.t1	AT1G74410	37.363	91	56	1	96	186	132	221	1.13e-15	73.6
MS.gene70256.t1	AT4G17905	66.667	45	15	0	139	183	179	223	1.22e-15	75.1
MS.gene70256.t1	AT4G17905	66.667	45	15	0	139	183	153	197	1.23e-15	74.7
MS.gene70256.t1	AT1G35330	42.308	78	43	1	111	186	97	174	1.35e-15	74.7
MS.gene70256.t1	AT2G20030	45.714	70	37	1	114	183	98	166	1.41e-15	75.1
MS.gene70256.t1	AT3G03550	59.184	49	20	0	139	187	157	205	1.90e-15	74.7
MS.gene70256.t1	AT4G30400	41.333	75	44	0	109	183	102	176	2.03e-15	75.1
MS.gene70256.t1	AT4G15975	37.363	91	55	1	96	186	33	121	2.03e-15	73.2
MS.gene70256.t1	AT5G17600	43.056	72	40	1	112	183	114	184	2.94e-15	74.3
MS.gene70256.t1	AT4G09130	43.590	78	42	1	111	186	88	165	3.16e-15	73.9
MS.gene70256.t1	AT3G18930	37.069	116	56	5	114	218	120	229	6.14e-15	73.6
MS.gene70256.t1	AT3G18930	37.069	116	56	5	114	218	120	229	6.14e-15	73.6
MS.gene70256.t1	AT3G18930	37.069	116	56	5	114	218	120	229	6.14e-15	73.6
MS.gene70256.t1	AT4G28890	42.254	71	40	1	114	184	97	166	9.55e-15	73.2
MS.gene70256.t1	AT4G09100	31.148	122	77	3	64	183	11	127	9.82e-15	68.9
MS.gene70256.t1	AT2G42360	31.200	125	73	2	62	183	36	150	1.07e-14	71.2
MS.gene70256.t1	AT1G33480	32.143	112	70	3	114	225	75	180	1.23e-14	71.2
MS.gene70256.t1	AT1G32361	37.500	104	59	4	84	186	101	199	1.77e-14	71.6
MS.gene70256.t1	AT4G17920	31.061	132	84	2	62	186	24	155	2.05e-14	71.2
MS.gene70256.t1	AT2G46493	29.104	134	92	2	53	183	47	180	2.36e-14	69.3
MS.gene70256.t1	AT5G10380	39.241	79	47	1	109	187	104	181	3.58e-14	70.5
MS.gene70256.t1	AT2G25410	42.529	87	47	2	100	183	283	369	4.04e-14	70.9
MS.gene70256.t1	AT4G10150	31.783	129	82	3	63	187	31	157	4.31e-14	69.7
MS.gene70256.t1	AT5G05810	40.278	72	42	1	112	183	118	188	5.16e-14	70.9
MS.gene70256.t1	AT1G72220	57.778	45	19	0	139	183	175	219	5.38e-14	70.9
MS.gene70256.t1	AT2G35420	31.667	120	78	3	64	183	30	145	5.75e-14	69.3
MS.gene70256.t1	AT5G42200	37.838	74	45	1	110	183	74	146	7.33e-14	67.4
MS.gene70256.t1	AT3G48030	37.662	77	48	0	110	186	98	174	8.89e-14	69.3
MS.gene70256.t1	AT5G66070	42.105	76	41	2	111	186	149	221	9.95e-14	68.2
MS.gene70256.t1	AT5G66070	42.105	76	41	2	111	186	149	221	9.95e-14	68.2
MS.gene70256.t1	AT3G48030	32.090	134	75	3	69	186	119	252	1.06e-13	69.7
MS.gene70256.t1	AT2G34990	29.134	127	88	1	59	183	12	138	1.21e-13	68.9
MS.gene70256.t1	AT5G66070	42.105	76	41	2	111	186	173	245	1.28e-13	68.2
MS.gene70256.t1	AT2G34990	29.134	127	88	1	59	183	34	160	1.46e-13	68.9
MS.gene70256.t1	AT4G33565	52.941	51	24	0	139	189	215	265	1.51e-13	69.3
MS.gene70256.t1	AT3G62690	44.928	69	37	1	115	183	88	155	1.69e-13	68.2
MS.gene70256.t1	AT5G58580	39.474	76	46	0	112	187	109	184	2.47e-13	68.2
MS.gene70256.t1	AT5G43420	25.595	168	98	3	62	208	38	199	2.78e-13	68.6
MS.gene70256.t1	AT2G35910	38.158	76	46	1	114	189	121	195	3.18e-13	66.6
MS.gene70256.t1	AT5G06490	33.333	102	52	2	114	209	96	187	3.46e-13	66.2
MS.gene70256.t1	AT5G07040	32.911	79	52	1	106	183	58	136	3.99e-13	65.5
MS.gene70256.t1	AT5G53110	36.000	75	47	1	110	183	298	372	8.48e-13	67.0
MS.gene70256.t1	AT2G46495	39.474	76	44	1	110	183	259	334	1.05e-12	66.6
MS.gene70256.t1	AT2G46495	39.474	76	44	1	110	183	287	362	1.09e-12	66.6
MS.gene70256.t1	AT5G36001	63.043	46	17	0	138	183	261	306	1.14e-12	66.6
MS.gene70256.t1	AT3G11110	37.349	83	52	0	101	183	67	149	1.35e-12	63.9
MS.gene70256.t1	AT3G19140	39.437	71	41	1	114	184	54	122	1.86e-12	63.2
MS.gene70256.t1	AT2G47560	41.096	73	42	1	112	183	78	150	2.17e-12	64.7
MS.gene70256.t1	AT2G46160	34.940	83	47	1	114	189	104	186	2.36e-12	64.3
MS.gene70256.t1	AT2G46160	34.940	83	47	1	114	189	104	186	2.36e-12	64.3
MS.gene70256.t1	AT2G34000	37.333	75	44	1	113	184	60	134	2.58e-12	63.2
MS.gene70256.t1	AT5G40250	50.000	48	24	0	140	187	142	189	2.59e-12	65.9
MS.gene70256.t1	AT2G42350	30.841	107	62	3	77	183	48	142	9.87e-12	62.8
MS.gene70256.t1	AT5G56340	39.506	81	41	2	103	183	228	300	1.00e-11	63.9
MS.gene70256.t1	AT3G61550	29.464	112	62	2	88	189	80	184	1.03e-11	62.4
MS.gene70256.t1	AT5G46650	31.646	158	87	7	45	186	8	160	1.10e-11	63.5
MS.gene70256.t1	AT4G26400	44.118	68	30	2	116	183	223	282	1.31e-11	63.5
MS.gene70256.t1	AT4G26400	44.118	68	30	2	116	183	223	282	1.31e-11	63.5
MS.gene70256.t1	AT4G35840	37.662	77	46	1	112	186	160	236	1.62e-11	62.4
MS.gene70256.t1	AT2G18670	32.000	75	51	0	109	183	78	152	2.11e-11	61.2
MS.gene70256.t1	AT1G35630	36.735	98	60	2	117	213	209	305	2.14e-11	62.8
MS.gene70256.t1	AT2G17730	37.333	75	45	1	112	184	165	239	2.69e-11	61.6
MS.gene70256.t1	AT2G01735	46.667	60	31	1	129	188	295	353	8.14e-11	61.2
MS.gene70256.t1	AT1G35625	35.714	98	61	2	117	213	209	305	9.06e-11	60.8

Find 43 sgRNAs with CRISPR-Local

Find 47 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
AATTCAACCAACTCATATTT+TGG	0.110117	4.1:+8817866	MS.gene70256:CDS
AATATGAGTTGGTTGAATTT+TGG	0.155497	4.1:-8817862	None:intergenic
ATTGATGTTCAATTGAATTT+TGG	0.255066	4.1:-8817805	None:intergenic
CGGTGCCAGAAACTATTATT+AGG	0.257137	4.1:+8818338	MS.gene70256:CDS
TGAGTTGAAACTACCAAGTT+TGG	0.317109	4.1:+8818117	MS.gene70256:CDS
TGAATCCTAATAATAGTTTC+TGG	0.344198	4.1:-8818343	None:intergenic
TTTGGCTATTTGTGAAAATA+CGG	0.358119	4.1:-8817844	None:intergenic
TGGAAACCATGATTGCATTT+AGG	0.379959	4.1:-8818199	None:intergenic
GAGACTTGTCGAAAGATTGT+TGG	0.388982	4.1:+8818289	MS.gene70256:CDS
GGAGGCACTGTCTGCACTTA+GGG	0.406481	4.1:-8818264	None:intergenic
AGTTACATTCAAAAGCTTCA+TGG	0.410074	4.1:-8818375	None:intergenic
TTGCATTAAACTTCATCATA+AGG	0.411192	4.1:+8817957	MS.gene70256:CDS
CAACAACAATCCACCTCAAT+TGG	0.419352	4.1:+8818036	MS.gene70256:CDS
ATGTTCGTTGCATCGACAAA+TGG	0.447158	4.1:+8818221	MS.gene70256:CDS
TCAGTTGAATAACTTACTGT+TGG	0.468597	4.1:-8818097	None:intergenic
AGGAGGCACTGTCTGCACTT+AGG	0.469581	4.1:-8818265	None:intergenic
ATTCCTTTGTTGACCAATTG+AGG	0.479348	4.1:-8818049	None:intergenic
CAGTTGAATAACTTACTGTT+GGG	0.481542	4.1:-8818096	None:intergenic
AGCACCGCCACCTATGTTGC+CGG	0.502426	4.1:+8818318	MS.gene70256:CDS
TTGGCTATTTGTGAAAATAC+GGG	0.508540	4.1:-8817843	None:intergenic
TTGTAGAATCTCACACAAGA+AGG	0.511006	4.1:+8817774	MS.gene70256:CDS
CTAATAATAGTTTCTGGCAC+CGG	0.527248	4.1:-8818337	None:intergenic
GGAATTCACGAAAGGTGAAA+AGG	0.529132	4.1:+8818165	MS.gene70256:CDS
GTTTCTGGCACCGGCAACAT+AGG	0.529637	4.1:-8818328	None:intergenic
TTGTCGAAAGATTGTTGGAT+CGG	0.534154	4.1:+8818294	MS.gene70256:CDS
ATACACTCTGTATCCAAACT+TGG	0.542352	4.1:-8818130	None:intergenic
TATGATGAAGTTTAATGCAA+GGG	0.555043	4.1:-8817954	None:intergenic
ACGAGCTCCAAAATATGAGT+TGG	0.556220	4.1:-8817873	None:intergenic
GGCACCGGCAACATAGGTGG+CGG	0.561343	4.1:-8818322	None:intergenic
ATTTGTCGATGCAACGAACA+TGG	0.562919	4.1:-8818219	None:intergenic
TTATGATGAAGTTTAATGCA+AGG	0.569193	4.1:-8817955	None:intergenic
CCTTTGTTGACCAATTGAGG+TGG	0.571148	4.1:-8818046	None:intergenic
ATGGAGAAGAGGTAAAGTAA+AGG	0.584415	4.1:-8817744	None:intergenic
ACAAGAAGCTCATGGAGAAG+AGG	0.592071	4.1:-8817755	None:intergenic
TCTGGCACCGGCAACATAGG+TGG	0.595566	4.1:-8818325	None:intergenic
GAGATTCTACAAGAAGCTCA+TGG	0.595637	4.1:-8817763	None:intergenic
CAATCTTTCGACAAGTCTCA+AGG	0.597223	4.1:-8818285	None:intergenic
TCAAAAGCTTCATGGTCTAG+TGG	0.599238	4.1:-8818367	None:intergenic
CCACCTCAATTGGTCAACAA+AGG	0.601823	4.1:+8818046	MS.gene70256:CDS
AGAGTGTATTATATGCCTCT+CGG	0.602500	4.1:+8818144	MS.gene70256:CDS
TGCCTCTCGGAATTCACGAA+AGG	0.628377	4.1:+8818157	MS.gene70256:CDS
CACCTTTCGTGAATTCCGAG+AGG	0.634223	4.1:-8818159	None:intergenic
TCTTTCGACAAGTCTCAAGG+AGG	0.776052	4.1:-8818282	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	AGCTACATTTAAAAATCTTA+AGG	-	chr4.1:8817987-8818006	None:intergenic	20.0%
!!!	ATTGATGTTCAATTGAATTT+TGG	-	chr4.1:8817808-8817827	None:intergenic	20.0%
!	TATGATGAAGTTTAATGCAA+GGG	-	chr4.1:8817957-8817976	None:intergenic	25.0%
!	TGAATCCTAATAATAGTTTC+TGG	-	chr4.1:8818346-8818365	None:intergenic	25.0%
!	TTATGATGAAGTTTAATGCA+AGG	-	chr4.1:8817958-8817977	None:intergenic	25.0%
!	TTGCATTAAACTTCATCATA+AGG	+	chr4.1:8817957-8817976	MS.gene70256:CDS	25.0%
!	TTTGGCTATTTGTGAAAATA+CGG	-	chr4.1:8817847-8817866	None:intergenic	25.0%
!!	AAGCTTTTGAATGTAACTAT+AGG	+	chr4.1:8818380-8818399	MS.gene70256:CDS	25.0%
!!	AATTCAACCAACTCATATTT+TGG	+	chr4.1:8817866-8817885	MS.gene70256:CDS	25.0%
!!	AGCTTTTGAATGTAACTATA+GGG	+	chr4.1:8818381-8818400	MS.gene70256:CDS	25.0%
!!!	AATATGAGTTGGTTGAATTT+TGG	-	chr4.1:8817865-8817884	None:intergenic	25.0%
	AGTTACATTCAAAAGCTTCA+TGG	-	chr4.1:8818378-8818397	None:intergenic	30.0%
	CAGTTGAATAACTTACTGTT+GGG	-	chr4.1:8818099-8818118	None:intergenic	30.0%
	TCAGTTGAATAACTTACTGT+TGG	-	chr4.1:8818100-8818119	None:intergenic	30.0%
	TTGGCTATTTGTGAAAATAC+GGG	-	chr4.1:8817846-8817865	None:intergenic	30.0%
!	ATTTTGCCTAAATGCAATCA+TGG	+	chr4.1:8818193-8818212	MS.gene70256:CDS	30.0%
	AGAGTGTATTATATGCCTCT+CGG	+	chr4.1:8818144-8818163	MS.gene70256:CDS	35.0%
	ATACACTCTGTATCCAAACT+TGG	-	chr4.1:8818133-8818152	None:intergenic	35.0%
	ATGGAGAAGAGGTAAAGTAA+AGG	-	chr4.1:8817747-8817766	None:intergenic	35.0%
	ATTCCTTTGTTGACCAATTG+AGG	-	chr4.1:8818052-8818071	None:intergenic	35.0%
	TGGAAACCATGATTGCATTT+AGG	-	chr4.1:8818202-8818221	None:intergenic	35.0%
	TTGTAGAATCTCACACAAGA+AGG	+	chr4.1:8817774-8817793	MS.gene70256:CDS	35.0%
	TTGTCGAAAGATTGTTGGAT+CGG	+	chr4.1:8818294-8818313	MS.gene70256:CDS	35.0%
!	TGAGTTGAAACTACCAAGTT+TGG	+	chr4.1:8818117-8818136	MS.gene70256:CDS	35.0%
!!	CTAATAATAGTTTCTGGCAC+CGG	-	chr4.1:8818340-8818359	None:intergenic	35.0%
	ACGAGCTCCAAAATATGAGT+TGG	-	chr4.1:8817876-8817895	None:intergenic	40.0%
	ATTTGTCGATGCAACGAACA+TGG	-	chr4.1:8818222-8818241	None:intergenic	40.0%
	CAACAACAATCCACCTCAAT+TGG	+	chr4.1:8818036-8818055	MS.gene70256:CDS	40.0%
	CAATCTTTCGACAAGTCTCA+AGG	-	chr4.1:8818288-8818307	None:intergenic	40.0%
	GAGACTTGTCGAAAGATTGT+TGG	+	chr4.1:8818289-8818308	MS.gene70256:CDS	40.0%
	GAGATTCTACAAGAAGCTCA+TGG	-	chr4.1:8817766-8817785	None:intergenic	40.0%
	GGAATTCACGAAAGGTGAAA+AGG	+	chr4.1:8818165-8818184	MS.gene70256:CDS	40.0%
	TCAAAAGCTTCATGGTCTAG+TGG	-	chr4.1:8818370-8818389	None:intergenic	40.0%
!	ATGTTCGTTGCATCGACAAA+TGG	+	chr4.1:8818221-8818240	MS.gene70256:CDS	40.0%
!	CGGTGCCAGAAACTATTATT+AGG	+	chr4.1:8818338-8818357	MS.gene70256:CDS	40.0%
	ACAAGAAGCTCATGGAGAAG+AGG	-	chr4.1:8817758-8817777	None:intergenic	45.0%
	CCACCTCAATTGGTCAACAA+AGG	+	chr4.1:8818046-8818065	MS.gene70256:CDS	45.0%
	CCTTTGTTGACCAATTGAGG+TGG	-	chr4.1:8818049-8818068	None:intergenic	45.0%
	TCTTTCGACAAGTCTCAAGG+AGG	-	chr4.1:8818285-8818304	None:intergenic	45.0%
	CACCTTTCGTGAATTCCGAG+AGG	-	chr4.1:8818162-8818181	None:intergenic	50.0%
	TGCCTCTCGGAATTCACGAA+AGG	+	chr4.1:8818157-8818176	MS.gene70256:CDS	50.0%
!!	AGGAGGCACTGTCTGCACTT+AGG	-	chr4.1:8818268-8818287	None:intergenic	55.0%
!!	GGAGGCACTGTCTGCACTTA+GGG	-	chr4.1:8818267-8818286	None:intergenic	55.0%
!!	GTTTCTGGCACCGGCAACAT+AGG	-	chr4.1:8818331-8818350	None:intergenic	55.0%
	AGCACCGCCACCTATGTTGC+CGG	+	chr4.1:8818318-8818337	MS.gene70256:CDS	60.0%
!!	TCTGGCACCGGCAACATAGG+TGG	-	chr4.1:8818328-8818347	None:intergenic	60.0%
!!	GGCACCGGCAACATAGGTGG+CGG	-	chr4.1:8818325-8818344	None:intergenic	65.0%

Chromosome	Type	Strat	End	Strand	Name
chr4.1	gene	8817728	8818417	8817728	ID=MS.gene70256
chr4.1	mRNA	8817728	8818417	8817728	ID=MS.gene70256.t1;Parent=MS.gene70256
chr4.1	exon	8817728	8818417	8817728	ID=MS.gene70256.t1.exon1;Parent=MS.gene70256.t1
chr4.1	CDS	8817728	8818417	8817728	ID=cds.MS.gene70256.t1;Parent=MS.gene70256.t1

Gene Sequence

>MS.gene70256

ATGTATGCTTCTACTTCCTTTACTTTACCTCTTCTCCATGAGCTTCTTGTAGAATCTCACACAAGAAGGTTACTCTTCCAAAATTCAATTGAACATCAATCACTTAAAATCAACTCCCGTATTTTCACAAATAGCCAAAATTCAACCAACTCATATTTTGGAGCTCGTGAATTTGATTCAAATGTTGTGATGATACTTGCAGTTCTATTATGTGCTTTTATTTGTTCCCTTGCATTAAACTTCATCATAAGGCGTGCCTTAAGATTTTTAAATGTAGCTCTCAACAACGACTCTTCTTCGAGTTCAAGCAACAACAATCCACCTCAATTGGTCAACAAAGGAATCAAGAAGAAAGCTCTCAAGACATTCCCAACAGTAAGTTATTCAACTGAGTTGAAACTACCAAGTTTGGATACAGAGTGTATTATATGCCTCTCGGAATTCACGAAAGGTGAAAAGGTGCACATTTTGCCTAAATGCAATCATGGTTTCCATGTTCGTTGCATCGACAAATGGCTAAAATCACACTCATCATGCCCTAAGTGCAGACAGTGCCTCCTTGAGACTTGTCGAAAGATTGTTGGATCGGAAGCACCGCCACCTATGTTGCCGGTGCCAGAAACTATTATTAGGATTCAGCCACTAGACCATGAAGCTTTTGAATGTAACTATAGGGAAGAAAGTAGATAA

Protein sequence

>MS.gene70256.t1

MYASTSFTLPLLHELLVESHTRRLLFQNSIEHQSLKINSRIFTNSQNSTNSYFGAREFDSNVVMILAVLLCAFICSLALNFIIRRALRFLNVALNNDSSSSSSNNNPPQLVNKGIKKKALKTFPTVSYSTELKLPSLDTECIICLSEFTKGEKVHILPKCNHGFHVRCIDKWLKSHSSCPKCRQCLLETCRKIVGSEAPPPMLPVPETIIRIQPLDHEAFECNYREESR