AlfalfaGEDB | MS.gene030657

M. sativa cultivar XinJiangDaYe / MS.gene030657

KEGG: K19040
GO: -
PFAM: PF13639.9

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene030657.t1	XP_003630206.2	84	225	29	1	1	225	1	218	8.80E-102	379.8

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene030657.t1	Q6NML0	44.6	213	99	4	21	224	23	225	6.5e-45	182.2

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene030657.t1	A0A2Z6NGL8	84.2	228	32	2	1	225	1	227	1.2e-95	359.0

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR

PPI:

Gene1	Gene2	Type
MS.gene70249	MS.gene030657	PPI
MS.gene030659	MS.gene030657	PPI
MS.gene030657	MS.gene030660	PPI
MS.gene58105	MS.gene030657	PPI
MS.gene58104	MS.gene030657	PPI
MS.gene030657	MS.gene28430	PPI
MS.gene049319	MS.gene030657	PPI
MS.gene030657	MS.gene030653	PPI
MS.gene030654	MS.gene030657	PPI
MS.gene030657	MS.gene28431	PPI
MS.gene58107	MS.gene030657	PPI
MS.gene28425	MS.gene030657	PPI
MS.gene030657	MS.gene70254	PPI
MS.gene030658	MS.gene030657	PPI
MS.gene76770	MS.gene030657	PPI
MS.gene030651	MS.gene030657	PPI
MS.gene030655	MS.gene030657	PPI
MS.gene58109	MS.gene030657	PPI
MS.gene030657	MS.gene70255	PPI
MS.gene030660	MS.gene030657	PPI
MS.gene030657	MS.gene58110	PPI
MS.gene70256	MS.gene030657	PPI
MS.gene28430	MS.gene030657	PPI
MS.gene030657	MS.gene70257	PPI
MS.gene013346	MS.gene030657	PPI
MS.gene030656	MS.gene030657	PPI
MS.gene58106	MS.gene030657	PPI
MS.gene70250	MS.gene030657	PPI
MS.gene70253	MS.gene030657	PPI
MS.gene030657	MS.gene94889	PPI
MS.gene70257	MS.gene030657	PPI
MS.gene28424	MS.gene030657	PPI
MS.gene48772	MS.gene030657	PPI
MS.gene030657	MS.gene88015	PPI
MS.gene030657	MS.gene70250	PPI
MS.gene58111	MS.gene030657	PPI
MS.gene28426	MS.gene030657	PPI
MS.gene06444	MS.gene030657	PPI
MS.gene030657	MS.gene31002	PPI
MS.gene58108	MS.gene030657	PPI
MS.gene28428	MS.gene030657	PPI
MS.gene28429	MS.gene030657	PPI
MS.gene28427	MS.gene030657	PPI
MS.gene030652	MS.gene030657	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene030657.t1	MTR_8g092840	90.789	228	18	1	1	225	1	228	8.63e-147	408
MS.gene030657.t1	MTR_8g092960	89.333	225	17	1	1	225	1	218	1.25e-139	390
MS.gene030657.t1	MTR_8g092970	78.829	222	41	1	1	222	1	216	5.12e-119	337
MS.gene030657.t1	MTR_8g093010	76.652	227	39	5	1	222	1	218	2.33e-118	336
MS.gene030657.t1	MTR_8g092930	76.889	225	48	2	1	222	1	224	1.30e-115	329
MS.gene030657.t1	MTR_8g092985	79.048	210	43	1	1	209	1	210	1.35e-111	318
MS.gene030657.t1	MTR_8g092990	76.549	226	49	2	1	222	1	226	2.08e-107	308
MS.gene030657.t1	MTR_3g095560	60.088	228	83	4	1	222	1	226	8.41e-92	270
MS.gene030657.t1	MTR_3g094000	51.880	133	61	2	53	184	36	166	2.36e-41	139
MS.gene030657.t1	MTR_7g073200	44.755	143	74	3	42	183	15	153	1.01e-39	135
MS.gene030657.t1	MTR_5g024730	48.175	137	64	4	54	188	26	157	3.34e-36	127
MS.gene030657.t1	MTR_3g116000	45.070	142	72	4	58	197	26	163	2.95e-34	121
MS.gene030657.t1	MTR_8g073120	47.287	129	58	4	54	179	19	140	6.75e-33	118
MS.gene030657.t1	MTR_2g035800	39.073	151	83	3	30	180	4	145	8.98e-32	114
MS.gene030657.t1	MTR_4g094725	38.255	149	81	3	33	180	11	149	2.73e-29	107
MS.gene030657.t1	MTR_1g100737	44.792	96	49	1	95	186	77	172	6.65e-20	84.3
MS.gene030657.t1	MTR_8g023400	46.835	79	39	2	110	187	92	168	1.21e-19	85.9
MS.gene030657.t1	MTR_6g055030	38.793	116	65	2	66	179	57	168	1.67e-19	85.5
MS.gene030657.t1	MTR_1g082550	33.333	150	84	4	42	183	32	173	4.10e-19	85.1
MS.gene030657.t1	MTR_3g110190	46.154	78	41	1	108	185	64	140	5.54e-19	84.3
MS.gene030657.t1	MTR_7g113800	34.667	150	77	8	44	183	28	166	1.71e-18	83.2
MS.gene030657.t1	MTR_4g120270	43.056	72	38	1	108	179	78	146	4.19e-18	80.9
MS.gene030657.t1	MTR_7g117540	56.140	57	25	0	129	185	93	149	1.26e-17	79.7
MS.gene030657.t1	MTR_4g063070	43.210	81	45	1	100	179	298	378	1.48e-17	80.9
MS.gene030657.t1	MTR_1g043410	25.974	154	94	3	39	180	21	166	1.61e-17	80.1
MS.gene030657.t1	MTR_3g071300	31.538	130	86	1	56	182	22	151	2.93e-17	76.6
MS.gene030657.t1	MTR_1g492830	29.747	158	95	3	61	218	22	163	2.97e-17	77.8
MS.gene030657.t1	MTR_6g087150	32.468	154	91	3	30	180	19	162	3.27e-17	79.7
MS.gene030657.t1	MTR_5g082940	44.318	88	46	2	96	182	63	148	6.00e-17	75.9
MS.gene030657.t1	MTR_7g116220	39.744	78	45	1	109	184	69	146	6.34e-17	75.9
MS.gene030657.t1	MTR_3g078450	33.588	131	80	3	91	220	57	181	1.14e-16	76.3
MS.gene030657.t1	MTR_2g096350	58.333	48	20	0	132	179	130	177	1.30e-16	75.9
MS.gene030657.t1	MTR_3g099650	42.308	78	43	1	108	183	105	182	1.32e-16	77.8
MS.gene030657.t1	MTR_5g071930	48.684	76	35	2	109	184	65	136	2.40e-16	74.7
MS.gene030657.t1	MTR_4g056590	41.026	78	41	2	109	186	99	171	2.90e-16	74.3
MS.gene030657.t1	MTR_5g064980	36.364	99	58	2	86	182	87	182	2.91e-16	77.0
MS.gene030657.t1	MTR_3g078470	31.452	124	83	2	61	182	26	149	4.22e-16	74.7
MS.gene030657.t1	MTR_3g464780	42.308	78	42	1	109	183	101	178	4.42e-16	75.1
MS.gene030657.t1	MTR_4g129420	41.772	79	46	0	105	183	112	190	5.41e-16	76.6
MS.gene030657.t1	MTR_7g076250	40.278	72	43	0	108	179	61	132	1.01e-15	72.8
MS.gene030657.t1	MTR_2g055790	35.780	109	63	2	78	183	42	146	1.58e-15	72.4
MS.gene030657.t1	MTR_3g100400	43.056	72	40	1	108	179	128	198	1.69e-15	75.1
MS.gene030657.t1	MTR_4g030070	34.091	88	56	1	100	187	75	160	2.19e-15	72.8
MS.gene030657.t1	MTR_2g436100	37.500	80	49	1	100	179	83	161	2.20e-15	73.6
MS.gene030657.t1	MTR_5g026730	29.008	131	89	2	53	179	6	136	3.19e-15	71.2
MS.gene030657.t1	MTR_8g066780	35.398	113	64	3	105	216	109	213	6.55e-15	72.8
MS.gene030657.t1	MTR_4g093830	41.429	70	40	1	110	179	126	194	7.81e-15	72.8
MS.gene030657.t1	MTR_3g012550	27.692	130	92	2	52	179	21	150	9.50e-15	70.1
MS.gene030657.t1	MTR_5g030010	36.709	79	49	1	105	183	117	194	1.30e-14	72.4
MS.gene030657.t1	MTR_1g070140	38.462	78	46	2	103	179	96	172	1.35e-14	72.0
MS.gene030657.t1	MTR_7g116180	37.179	78	47	1	107	182	64	141	1.52e-14	69.3
MS.gene030657.t1	MTR_5g092790	42.683	82	44	2	100	179	147	227	2.00e-14	70.5
MS.gene030657.t1	MTR_8g089880	35.000	80	51	1	110	189	127	205	2.17e-14	70.9
MS.gene030657.t1	MTR_3g114500	30.769	117	77	2	63	179	1	113	2.24e-14	67.8
MS.gene030657.t1	MTR_1g070425	37.179	78	47	1	107	182	65	142	2.51e-14	68.9
MS.gene030657.t1	MTR_5g066250	40.278	72	42	1	108	179	132	202	2.63e-14	71.6
MS.gene030657.t1	MTR_1g056350	39.726	73	40	2	110	179	74	145	3.13e-14	68.6
MS.gene030657.t1	MTR_7g108855	34.259	108	61	3	97	195	53	159	3.25e-14	68.9
MS.gene030657.t1	MTR_3g091620	41.892	74	42	1	110	183	101	173	4.28e-14	70.5
MS.gene030657.t1	MTR_5g064890	35.897	78	49	1	106	183	124	200	4.68e-14	70.5
MS.gene030657.t1	MTR_8g074900	33.333	123	68	2	69	182	108	225	5.48e-14	68.9
MS.gene030657.t1	MTR_5g064990	38.462	78	46	1	108	183	112	189	5.91e-14	70.5
MS.gene030657.t1	MTR_2g090905	41.558	77	40	1	108	179	37	113	6.27e-14	66.6
MS.gene030657.t1	MTR_2g009310	55.556	45	20	0	135	179	159	203	6.71e-14	70.1
MS.gene030657.t1	MTR_1g074190	33.333	90	55	1	103	187	92	181	7.02e-14	70.1
MS.gene030657.t1	MTR_3g086700	31.356	118	74	2	72	182	3	120	7.78e-14	67.8
MS.gene030657.t1	MTR_2g090950	39.744	78	42	1	107	179	88	165	8.28e-14	68.6
MS.gene030657.t1	MTR_6g007670	41.096	73	41	1	107	179	5	75	8.81e-14	68.9
MS.gene030657.t1	MTR_6g007670	42.254	71	41	0	109	179	144	214	1.78e-11	62.4
MS.gene030657.t1	MTR_5g009190	37.805	82	50	1	100	180	256	337	9.02e-14	69.7
MS.gene030657.t1	MTR_5g009210	38.272	81	49	1	100	179	277	357	9.29e-14	69.7
MS.gene030657.t1	MTR_5g026720	53.333	45	21	0	135	179	91	135	9.95e-14	67.0
MS.gene030657.t1	MTR_2g041200	34.109	129	64	3	61	179	34	151	1.12e-13	67.0
MS.gene030657.t1	MTR_5g022920	38.961	77	46	1	107	182	158	234	1.26e-13	68.2
MS.gene030657.t1	MTR_6g007737	30.370	135	80	3	61	182	71	204	1.52e-13	69.3
MS.gene030657.t1	MTR_4g108830	32.979	94	61	1	87	180	98	189	1.54e-13	67.0
MS.gene030657.t1	MTR_4g108830	32.979	94	61	1	87	180	126	217	1.56e-13	67.4
MS.gene030657.t1	MTR_5g034790	38.961	77	46	1	106	182	112	187	1.56e-13	68.9
MS.gene030657.t1	MTR_4g106680	37.838	74	45	1	106	179	102	174	1.95e-13	68.6
MS.gene030657.t1	MTR_1g026070	29.060	117	79	1	63	179	1	113	2.17e-13	65.1
MS.gene030657.t1	MTR_5g076990	30.147	136	85	3	54	179	13	148	2.29e-13	68.2
MS.gene030657.t1	MTR_8g028465	36.620	71	42	1	110	180	90	157	2.74e-13	66.6
MS.gene030657.t1	MTR_7g059360	43.478	69	38	1	113	180	133	201	2.80e-13	67.0
MS.gene030657.t1	MTR_3g086730	31.356	118	74	2	72	182	3	120	2.87e-13	67.0
MS.gene030657.t1	MTR_5g092750	42.683	82	44	2	100	179	147	227	2.87e-13	67.0
MS.gene030657.t1	MTR_7g079290	42.623	61	35	0	134	194	152	212	2.95e-13	66.6
MS.gene030657.t1	MTR_3g091200	27.485	171	103	5	18	179	215	373	3.14e-13	68.2
MS.gene030657.t1	MTR_8g063660	37.975	79	48	1	106	184	64	141	3.75e-13	67.8
MS.gene030657.t1	MTR_8g099495	37.179	78	48	1	104	180	313	390	5.05e-13	67.8
MS.gene030657.t1	MTR_6g007680	39.726	73	43	1	107	179	37	108	5.49e-13	64.7
MS.gene030657.t1	MTR_5g009200	37.037	81	50	1	100	179	312	392	9.13e-13	67.0
MS.gene030657.t1	MTR_3g078120	27.132	129	80	2	63	179	1	127	9.86e-13	63.9
MS.gene030657.t1	MTR_8g071815	55.814	43	19	0	137	179	90	132	1.18e-12	64.3
MS.gene030657.t1	MTR_7g116200	38.356	73	43	1	107	179	65	135	3.74e-12	62.8
MS.gene030657.t1	MTR_4g022410	34.951	103	62	2	93	195	74	171	4.67e-12	62.8
MS.gene030657.t1	MTR_8g032690	46.154	52	28	0	137	188	19	70	5.49e-12	60.8
MS.gene030657.t1	MTR_3g087900	46.154	65	30	3	120	183	55	115	8.86e-12	61.6
MS.gene030657.t1	MTR_7g079280	33.766	77	50	1	110	185	80	156	1.05e-11	61.6
MS.gene030657.t1	MTR_2g079320	35.484	93	55	2	95	182	112	204	1.06e-11	62.4
MS.gene030657.t1	MTR_6g055030	56.098	41	18	0	139	179	97	137	1.11e-11	63.2
MS.gene030657.t1	MTR_8g066740	29.688	128	80	3	62	179	21	148	1.12e-11	63.5
MS.gene030657.t1	MTR_8g019710	55.556	45	20	0	135	179	52	96	1.20e-11	60.8
MS.gene030657.t1	MTR_3g081030	32.292	96	61	2	100	195	86	177	1.63e-11	62.0
MS.gene030657.t1	MTR_8g099515	39.437	71	42	1	110	179	309	379	2.10e-11	63.2
MS.gene030657.t1	MTR_8g027745	35.211	71	45	1	110	179	286	356	4.00e-11	62.0
MS.gene030657.t1	MTR_7g096690	25.000	132	83	4	61	179	14	142	4.46e-11	61.6
MS.gene030657.t1	MTR_7g117350	26.016	123	83	2	63	180	246	365	5.10e-11	61.6
MS.gene030657.t1	MTR_7g117350	26.016	123	83	2	63	180	238	357	5.20e-11	61.6
MS.gene030657.t1	MTR_7g116210	36.986	73	44	1	107	179	7	77	5.25e-11	58.5
MS.gene030657.t1	MTR_1g096780	34.043	94	54	3	110	202	208	294	6.72e-11	61.6
MS.gene030657.t1	MTR_8g027980	34.667	75	47	1	113	185	93	167	8.53e-11	60.5
MS.gene030657.t1	MTR_8g009190	48.980	49	25	0	135	183	103	151	9.34e-11	60.8

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene030657.t1	AT1G49230	46.948	213	91	5	11	216	17	214	1.88e-61	192
MS.gene030657.t1	AT1G49210	46.009	213	96	4	21	224	23	225	1.93e-59	187
MS.gene030657.t1	AT1G49220	50.000	180	70	4	21	192	23	190	9.67e-59	186
MS.gene030657.t1	AT1G49200	45.070	213	98	4	21	224	24	226	1.29e-58	185
MS.gene030657.t1	AT3G18773	44.737	228	102	8	6	224	8	220	3.13e-55	176
MS.gene030657.t1	AT5G05280	51.515	132	52	3	57	184	37	160	9.69e-42	140
MS.gene030657.t1	AT3G10910	48.649	148	61	4	57	198	29	167	2.19e-41	139
MS.gene030657.t1	AT1G76410	44.138	145	81	0	41	185	8	152	5.45e-38	130
MS.gene030657.t1	AT1G20823	41.566	166	81	4	23	183	3	157	8.16e-37	128
MS.gene030657.t1	AT2G17450	43.511	131	60	2	58	182	25	147	8.66e-31	112
MS.gene030657.t1	AT5G01880	40.217	184	83	6	12	193	1	159	2.46e-30	110
MS.gene030657.t1	AT5G47610	33.758	157	95	2	23	179	2	149	2.14e-27	103
MS.gene030657.t1	AT4G35480	38.571	140	69	3	58	183	23	159	4.91e-27	103
MS.gene030657.t1	AT4G17245	36.154	130	71	3	51	179	27	145	2.62e-24	95.1
MS.gene030657.t1	AT4G09120	35.537	121	73	2	64	182	51	168	1.10e-19	86.3
MS.gene030657.t1	AT4G09110	35.537	121	73	2	64	182	51	168	2.57e-19	84.7
MS.gene030657.t1	AT1G23980	34.104	173	89	6	34	183	20	190	7.41e-19	84.3
MS.gene030657.t1	AT1G72310	47.436	78	39	1	106	183	98	173	1.10e-18	83.2
MS.gene030657.t1	AT1G53820	46.835	79	36	3	106	182	91	165	1.32e-18	82.8
MS.gene030657.t1	AT3G05200	30.168	179	105	3	48	206	36	214	2.07e-18	83.2
MS.gene030657.t1	AT2G27940	38.614	101	59	2	96	196	101	198	3.03e-18	80.9
MS.gene030657.t1	AT1G72200	30.769	156	85	5	61	209	62	201	5.41e-18	82.0
MS.gene030657.t1	AT3G14320	33.333	120	77	2	62	180	14	131	1.64e-17	78.2
MS.gene030657.t1	AT4G40070	32.432	148	92	4	64	206	49	193	1.73e-17	80.1
MS.gene030657.t1	AT1G22500	31.507	146	97	2	53	195	31	176	2.27e-17	80.1
MS.gene030657.t1	AT1G74410	39.130	92	55	1	91	182	131	221	3.57e-17	77.4
MS.gene030657.t1	AT2G25410	36.667	120	69	3	64	179	253	369	8.71e-17	78.6
MS.gene030657.t1	AT3G16720	37.500	96	57	2	99	194	83	175	9.41e-17	77.8
MS.gene030657.t1	AT1G35330	31.783	129	77	2	65	182	46	174	1.69e-16	77.4
MS.gene030657.t1	AT2G20030	47.143	70	36	1	110	179	98	166	2.43e-16	77.4
MS.gene030657.t1	AT5G57750	40.000	75	45	0	106	180	91	165	2.79e-16	75.1
MS.gene030657.t1	AT2G35000	32.576	132	78	3	62	183	51	181	2.99e-16	77.0
MS.gene030657.t1	AT2G18650	42.308	78	45	0	106	183	95	172	3.72e-16	77.0
MS.gene030657.t1	AT5G27420	38.384	99	53	3	93	184	74	171	4.53e-16	76.3
MS.gene030657.t1	AT1G04360	29.771	131	79	3	62	179	46	176	5.07e-16	76.3
MS.gene030657.t1	AT4G15975	35.052	97	61	1	86	182	27	121	6.13e-16	74.3
MS.gene030657.t1	AT4G30400	40.000	75	45	0	105	179	102	176	7.90e-16	76.3
MS.gene030657.t1	AT4G10160	31.429	140	86	4	50	183	8	143	8.65e-16	73.9
MS.gene030657.t1	AT2G46493	41.333	75	43	1	106	179	106	180	9.59e-16	72.8
MS.gene030657.t1	AT3G03550	57.143	49	21	0	135	183	157	205	1.35e-15	75.1
MS.gene030657.t1	AT5G17600	41.667	72	41	1	108	179	114	184	1.84e-15	74.7
MS.gene030657.t1	AT4G17905	48.485	66	32	1	114	179	134	197	1.89e-15	74.3
MS.gene030657.t1	AT4G28890	43.662	71	39	1	110	180	97	166	1.94e-15	74.7
MS.gene030657.t1	AT4G17905	46.154	78	38	2	102	179	150	223	1.95e-15	74.3
MS.gene030657.t1	AT1G28040	41.333	75	43	1	106	179	221	295	2.84e-15	73.6
MS.gene030657.t1	AT1G33480	32.673	101	65	2	110	210	75	172	2.90e-15	73.2
MS.gene030657.t1	AT2G46494	28.467	137	89	2	52	179	222	358	3.88e-15	73.6
MS.gene030657.t1	AT5G05810	43.056	72	40	1	108	179	118	188	5.27e-15	73.6
MS.gene030657.t1	AT5G66070	45.333	75	38	2	108	182	150	221	5.41e-15	71.6
MS.gene030657.t1	AT5G66070	45.333	75	38	2	108	182	150	221	5.41e-15	71.6
MS.gene030657.t1	AT5G06490	40.789	76	39	1	110	179	96	171	6.96e-15	70.9
MS.gene030657.t1	AT2G35910	40.789	76	44	1	110	185	121	195	7.32e-15	71.2
MS.gene030657.t1	AT4G09100	36.585	82	50	2	100	179	46	127	7.33e-15	69.3
MS.gene030657.t1	AT5G66070	45.333	75	38	2	108	182	174	245	9.66e-15	71.2
MS.gene030657.t1	AT3G48030	38.043	92	45	3	100	182	86	174	1.06e-14	71.6
MS.gene030657.t1	AT4G09130	42.105	76	42	1	109	182	90	165	1.56e-14	72.0
MS.gene030657.t1	AT4G10150	35.714	84	52	1	100	183	76	157	1.78e-14	70.5
MS.gene030657.t1	AT3G18930	36.207	116	57	5	110	214	120	229	1.81e-14	72.0
MS.gene030657.t1	AT3G18930	36.207	116	57	5	110	214	120	229	1.81e-14	72.0
MS.gene030657.t1	AT3G18930	36.207	116	57	5	110	214	120	229	1.81e-14	72.0
MS.gene030657.t1	AT3G48030	38.043	92	45	3	100	182	164	252	1.83e-14	71.6
MS.gene030657.t1	AT5G42200	39.189	74	44	1	106	179	74	146	2.56e-14	68.6
MS.gene030657.t1	AT5G07040	30.328	122	80	3	63	180	17	137	3.87e-14	68.2
MS.gene030657.t1	AT5G10380	37.500	80	47	2	105	183	104	181	7.06e-14	69.7
MS.gene030657.t1	AT2G34990	29.032	124	82	2	62	179	15	138	7.33e-14	69.7
MS.gene030657.t1	AT1G72220	40.000	70	41	1	110	179	151	219	7.33e-14	70.1
MS.gene030657.t1	AT2G34990	29.032	124	82	2	62	179	37	160	8.38e-14	69.7
MS.gene030657.t1	AT4G17920	28.788	132	84	3	61	182	24	155	9.76e-14	69.3
MS.gene030657.t1	AT2G35420	28.682	129	82	2	60	179	18	145	1.39e-13	68.2
MS.gene030657.t1	AT1G32361	32.759	116	75	2	108	223	128	240	1.53e-13	68.9
MS.gene030657.t1	AT5G43420	26.761	142	80	3	62	179	39	180	1.70e-13	68.9
MS.gene030657.t1	AT5G53110	39.437	71	42	1	110	179	302	372	1.71e-13	68.9
MS.gene030657.t1	AT4G35840	29.936	157	85	4	48	182	83	236	1.82e-13	67.8
MS.gene030657.t1	AT3G11110	28.667	150	96	2	34	179	7	149	1.84e-13	66.2
MS.gene030657.t1	AT3G62690	46.875	64	33	1	116	179	93	155	1.96e-13	67.8
MS.gene030657.t1	AT5G58580	34.343	99	63	1	85	183	88	184	4.03e-13	67.4
MS.gene030657.t1	AT4G33565	49.020	51	26	0	135	185	215	265	4.62e-13	67.8
MS.gene030657.t1	AT1G35630	39.796	98	57	2	113	209	209	305	7.33e-13	67.0
MS.gene030657.t1	AT2G47560	29.787	141	88	4	44	179	16	150	9.19e-13	65.5
MS.gene030657.t1	AT4G26400	45.588	68	29	2	112	179	223	282	1.11e-12	66.6
MS.gene030657.t1	AT4G26400	45.588	68	29	2	112	179	223	282	1.11e-12	66.6
MS.gene030657.t1	AT2G17730	59.091	44	18	0	137	180	196	239	1.15e-12	65.5
MS.gene030657.t1	AT2G46160	33.735	83	48	1	110	185	104	186	1.38e-12	65.1
MS.gene030657.t1	AT2G46160	33.735	83	48	1	110	185	104	186	1.38e-12	65.1
MS.gene030657.t1	AT2G46495	38.158	76	45	1	106	179	287	362	2.00e-12	65.9
MS.gene030657.t1	AT2G46495	38.158	76	45	1	106	179	259	334	2.14e-12	65.9
MS.gene030657.t1	AT5G40250	26.846	149	79	3	61	183	45	189	2.31e-12	65.9
MS.gene030657.t1	AT3G19140	34.314	102	64	2	80	180	23	122	2.34e-12	62.8
MS.gene030657.t1	AT2G18670	33.333	75	50	0	105	179	78	152	2.37e-12	63.5
MS.gene030657.t1	AT5G36001	57.447	47	20	0	134	180	261	307	3.72e-12	65.1
MS.gene030657.t1	AT5G56340	45.588	68	29	2	112	179	241	300	4.08e-12	65.1
MS.gene030657.t1	AT2G42360	34.667	75	49	0	105	179	76	150	1.09e-11	62.8
MS.gene030657.t1	AT3G20395	37.363	91	53	2	93	182	129	216	1.41e-11	62.4
MS.gene030657.t1	AT2G34000	25.397	126	90	2	59	180	9	134	1.70e-11	60.8
MS.gene030657.t1	AT3G61550	29.032	93	56	1	103	185	92	184	3.26e-11	61.2
MS.gene030657.t1	AT1G53010	50.000	50	25	0	136	185	129	178	3.57e-11	60.5
MS.gene030657.t1	AT2G42350	36.000	75	46	1	105	179	70	142	4.16e-11	60.8
MS.gene030657.t1	AT3G47990	52.000	50	23	1	130	179	171	219	5.53e-11	61.2
MS.gene030657.t1	AT3G47990	52.000	50	23	1	130	179	171	219	5.53e-11	61.2
MS.gene030657.t1	AT3G47990	52.000	50	23	1	130	179	171	219	5.53e-11	61.2
MS.gene030657.t1	AT3G47990	55.556	45	19	1	135	179	233	276	5.76e-11	61.6
MS.gene030657.t1	AT3G47990	52.000	50	23	1	130	179	212	260	5.92e-11	61.6
MS.gene030657.t1	AT5G46650	25.767	163	102	5	35	182	2	160	6.14e-11	61.2

Find 48 sgRNAs with CRISPR-Local

Find 51 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
AATTCAACTAACTCGTATTT+TGG	0.157335	4.3:+8643241	MS.gene030657:CDS
ATTGATAATCAATTGGATTT+TGG	0.213343	4.3:-8643183	None:intergenic
CAGTGCCGGAATCTATTATT+AGG	0.242669	4.3:+8643704	MS.gene030657:CDS
GTTGATGATGGCTACGTTTA+GGG	0.291505	4.3:-8643359	None:intergenic
CGTTGATGATGGCTACGTTT+AGG	0.307492	4.3:-8643360	None:intergenic
TGAGTTGAAACTACCAAGTT+TGG	0.317109	4.3:+8643483	MS.gene030657:CDS
TGGAAACCATGATTGCATTT+AGG	0.379959	4.3:-8643565	None:intergenic
CAGCAACTCTTCACCTCAAT+TGG	0.387549	4.3:+8643402	MS.gene030657:CDS
GAGACTTGTCGAAAGATTGT+TGG	0.388982	4.3:+8643655	MS.gene030657:CDS
TTGCATTAAACTCCATTGTA+AGG	0.407407	4.3:+8643332	MS.gene030657:CDS
AAGGAGGCACTGTCTGCACT+TGG	0.408731	4.3:-8643632	None:intergenic
AGTTACATTCAAAAGCTTCA+TGG	0.410074	4.3:-8643741	None:intergenic
GTTGGTGATTGATAATCAAT+TGG	0.420758	4.3:-8643190	None:intergenic
TTGTGGTTGTGTGTGAGAAC+AGG	0.421574	4.3:-8643220	None:intergenic
GCCTCCTATGTTGCCAGTGC+CGG	0.430012	4.3:+8643690	MS.gene030657:CDS
AGCAAATAATAGCACACAAT+AGG	0.430929	4.3:-8643306	None:intergenic
ATGTTCGTTGCATCGACAAA+TGG	0.447158	4.3:+8643587	MS.gene030657:CDS
ATTCCTTTGTTAGCCAATTG+AGG	0.468663	4.3:-8643415	None:intergenic
CTAATAATAGATTCCGGCAC+TGG	0.476860	4.3:-8643703	None:intergenic
AGATTTCACAAAGGGTGAAA+AGG	0.489010	4.3:+8643531	MS.gene030657:CDS
GTGTGTGAGAACAGGGGAGC+TGG	0.495001	4.3:-8643212	None:intergenic
TGAATCCTAATAATAGATTC+CGG	0.497786	4.3:-8643709	None:intergenic
AGGAGGCACTGTCTGCACTT+GGG	0.504991	4.3:-8643631	None:intergenic
ATACACTCTGCATCCAAACT+TGG	0.507255	4.3:-8643496	None:intergenic
GGAGGCACTGTCTGCACTTG+GGG	0.507612	4.3:-8643630	None:intergenic
GATTCCGGCACTGGCAACAT+AGG	0.508387	4.3:-8643694	None:intergenic
TTGTGGAATCTCACACAAGA+AGG	0.511006	4.3:+8643152	MS.gene030657:CDS
CGAAGAAGAGTCGTTGATGA+TGG	0.512398	4.3:-8643371	None:intergenic
AATACGAGTTAGTTGAATTG+TGG	0.518921	4.3:-8643237	None:intergenic
TGTCTCTCAGATTTCACAAA+GGG	0.531207	4.3:+8643523	MS.gene030657:CDS
ACTTCTCCATGAGCTTCTTG+TGG	0.539026	4.3:+8643135	MS.gene030657:CDS
TGTGGTTGTGTGTGAGAACA+GGG	0.540709	4.3:-8643219	None:intergenic
ATTTGTCGATGCAACGAACA+TGG	0.562919	4.3:-8643585	None:intergenic
GGCACTGGCAACATAGGAGG+CGG	0.574365	4.3:-8643688	None:intergenic
GAGATTCCACAAGAAGCTCA+TGG	0.584576	4.3:-8643141	None:intergenic
TCCGGCACTGGCAACATAGG+AGG	0.592143	4.3:-8643691	None:intergenic
CAATCTTTCGACAAGTCTCA+AGG	0.597223	4.3:-8643651	None:intergenic
TCAAAAGCTTCATGGTCTAG+TGG	0.599238	4.3:-8643733	None:intergenic
ACAAGAAGCTCATGGAGAAG+TGG	0.600282	4.3:-8643133	None:intergenic
TCACCTCAATTGGCTAACAA+AGG	0.606400	4.3:+8643412	MS.gene030657:CDS
GTTTAGGGCACACCTTACAA+TGG	0.614051	4.3:-8643344	None:intergenic
GTGAGAACAGGGGAGCTGGT+TGG	0.655380	4.3:-8643208	None:intergenic
AGCTCTCAAGACATTTCCCA+CGG	0.658312	4.3:+8643447	MS.gene030657:CDS
TCAGTTGAGTAGTTCACCGT+GGG	0.659654	4.3:-8643463	None:intergenic
ATGTCTCTCAGATTTCACAA+AGG	0.686490	4.3:+8643522	MS.gene030657:CDS
CTCAGTTGAGTAGTTCACCG+TGG	0.697094	4.3:-8643464	None:intergenic
GTGGTTGTGTGTGAGAACAG+GGG	0.771294	4.3:-8643218	None:intergenic
TCTTTCGACAAGTCTCAAGG+AGG	0.776052	4.3:-8643648	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	ATTGATAATCAATTGGATTT+TGG	-	chr4.3:8643186-8643205	None:intergenic	20.0%
!	TGAATCCTAATAATAGATTC+CGG	-	chr4.3:8643712-8643731	None:intergenic	25.0%
!!	AAGCTTTTGAATGTAACTAT+AGG	+	chr4.3:8643746-8643765	MS.gene030657:CDS	25.0%
!!	AATTCAACTAACTCGTATTT+TGG	+	chr4.3:8643241-8643260	MS.gene030657:CDS	25.0%
!!	AGCTTTTGAATGTAACTATA+GGG	+	chr4.3:8643747-8643766	MS.gene030657:CDS	25.0%
	AATACGAGTTAGTTGAATTG+TGG	-	chr4.3:8643240-8643259	None:intergenic	30.0%
	AGCAAATAATAGCACACAAT+AGG	-	chr4.3:8643309-8643328	None:intergenic	30.0%
	AGTTACATTCAAAAGCTTCA+TGG	-	chr4.3:8643744-8643763	None:intergenic	30.0%
	TTGCATTAAACTCCATTGTA+AGG	+	chr4.3:8643332-8643351	MS.gene030657:CDS	30.0%
!	ATTTTGCCTAAATGCAATCA+TGG	+	chr4.3:8643559-8643578	MS.gene030657:CDS	30.0%
!!	GTTGGTGATTGATAATCAAT+TGG	-	chr4.3:8643193-8643212	None:intergenic	30.0%
	AGATTTCACAAAGGGTGAAA+AGG	+	chr4.3:8643531-8643550	MS.gene030657:CDS	35.0%
	ATGTCTCTCAGATTTCACAA+AGG	+	chr4.3:8643522-8643541	MS.gene030657:CDS	35.0%
	ATTCCTTTGTTAGCCAATTG+AGG	-	chr4.3:8643418-8643437	None:intergenic	35.0%
	TGGAAACCATGATTGCATTT+AGG	-	chr4.3:8643568-8643587	None:intergenic	35.0%
	TGTCTCTCAGATTTCACAAA+GGG	+	chr4.3:8643523-8643542	MS.gene030657:CDS	35.0%
!	TGAGTTGAAACTACCAAGTT+TGG	+	chr4.3:8643483-8643502	MS.gene030657:CDS	35.0%
	ATACACTCTGCATCCAAACT+TGG	-	chr4.3:8643499-8643518	None:intergenic	40.0%
	ATTTGTCGATGCAACGAACA+TGG	-	chr4.3:8643588-8643607	None:intergenic	40.0%
	CAATCTTTCGACAAGTCTCA+AGG	-	chr4.3:8643654-8643673	None:intergenic	40.0%
	CTAATAATAGATTCCGGCAC+TGG	-	chr4.3:8643706-8643725	None:intergenic	40.0%
	GAGACTTGTCGAAAGATTGT+TGG	+	chr4.3:8643655-8643674	MS.gene030657:CDS	40.0%
	TCAAAAGCTTCATGGTCTAG+TGG	-	chr4.3:8643736-8643755	None:intergenic	40.0%
	TCACCTCAATTGGCTAACAA+AGG	+	chr4.3:8643412-8643431	MS.gene030657:CDS	40.0%
	TTGTGGAATCTCACACAAGA+AGG	+	chr4.3:8643152-8643171	MS.gene030657:CDS	40.0%
!	ATGTTCGTTGCATCGACAAA+TGG	+	chr4.3:8643587-8643606	MS.gene030657:CDS	40.0%
!	CAGTGCCGGAATCTATTATT+AGG	+	chr4.3:8643704-8643723	MS.gene030657:CDS	40.0%
!!	GTTGATGATGGCTACGTTTA+GGG	-	chr4.3:8643362-8643381	None:intergenic	40.0%
	ACAAGAAGCTCATGGAGAAG+TGG	-	chr4.3:8643136-8643155	None:intergenic	45.0%
	ACTTCTCCATGAGCTTCTTG+TGG	+	chr4.3:8643135-8643154	MS.gene030657:CDS	45.0%
	AGCTCTCAAGACATTTCCCA+CGG	+	chr4.3:8643447-8643466	MS.gene030657:CDS	45.0%
	CAGCAACTCTTCACCTCAAT+TGG	+	chr4.3:8643402-8643421	MS.gene030657:CDS	45.0%
	GAGATTCCACAAGAAGCTCA+TGG	-	chr4.3:8643144-8643163	None:intergenic	45.0%
	TCAGTTGAGTAGTTCACCGT+GGG	-	chr4.3:8643466-8643485	None:intergenic	45.0%
	TCTTTCGACAAGTCTCAAGG+AGG	-	chr4.3:8643651-8643670	None:intergenic	45.0%
	TGTGGTTGTGTGTGAGAACA+GGG	-	chr4.3:8643222-8643241	None:intergenic	45.0%
	TTGTGGTTGTGTGTGAGAAC+AGG	-	chr4.3:8643223-8643242	None:intergenic	45.0%
!	CGAAGAAGAGTCGTTGATGA+TGG	-	chr4.3:8643374-8643393	None:intergenic	45.0%
!	GTTTAGGGCACACCTTACAA+TGG	-	chr4.3:8643347-8643366	None:intergenic	45.0%
!!	CGTTGATGATGGCTACGTTT+AGG	-	chr4.3:8643363-8643382	None:intergenic	45.0%
	CTCAGTTGAGTAGTTCACCG+TGG	-	chr4.3:8643467-8643486	None:intergenic	50.0%
	GTGGTTGTGTGTGAGAACAG+GGG	-	chr4.3:8643221-8643240	None:intergenic	50.0%
!!	AAGGAGGCACTGTCTGCACT+TGG	-	chr4.3:8643635-8643654	None:intergenic	55.0%
!!	AGGAGGCACTGTCTGCACTT+GGG	-	chr4.3:8643634-8643653	None:intergenic	55.0%
!!	GATTCCGGCACTGGCAACAT+AGG	-	chr4.3:8643697-8643716	None:intergenic	55.0%
	GCCTCCTATGTTGCCAGTGC+CGG	+	chr4.3:8643690-8643709	MS.gene030657:CDS	60.0%
	GTGAGAACAGGGGAGCTGGT+TGG	-	chr4.3:8643211-8643230	None:intergenic	60.0%
	GTGTGTGAGAACAGGGGAGC+TGG	-	chr4.3:8643215-8643234	None:intergenic	60.0%
!!	GGAGGCACTGTCTGCACTTG+GGG	-	chr4.3:8643633-8643652	None:intergenic	60.0%
!!	GGCACTGGCAACATAGGAGG+CGG	-	chr4.3:8643691-8643710	None:intergenic	60.0%
!!	TCCGGCACTGGCAACATAGG+AGG	-	chr4.3:8643694-8643713	None:intergenic	60.0%

Chromosome	Type	Strat	End	Strand	Name
chr4.3	gene	8643106	8643783	8643106	ID=MS.gene030657
chr4.3	mRNA	8643106	8643783	8643106	ID=MS.gene030657.t1;Parent=MS.gene030657
chr4.3	exon	8643106	8643783	8643106	ID=MS.gene030657.t1.exon1;Parent=MS.gene030657.t1
chr4.3	CDS	8643106	8643783	8643106	ID=cds.MS.gene030657.t1;Parent=MS.gene030657.t1

Gene Sequence

>MS.gene030657

ATGTATGCTTCTACTTCTTTTACTTCACCACTTCTCCATGAGCTTCTTGTGGAATCTCACACAAGAAGGTTACTCTTCCAAAATCCAATTGATTATCAATCACCAACCAGCTCCCCTGTTCTCACACACAACCACAATTCAACTAACTCGTATTTTGGTGCTCGTGAGTTTGAATCAAATGTTGTGATGATAGTTGCTGTCCTATTGTGTGCTATTATTTGCTCAATTGCATTAAACTCCATTGTAAGGTGTGCCCTAAACGTAGCCATCATCAACGACTCTTCTTCGAGTTCTAGCAGCAACTCTTCACCTCAATTGGCTAACAAAGGAATCAAGAAGAAAGCTCTCAAGACATTTCCCACGGTGAACTACTCAACTGAGTTGAAACTACCAAGTTTGGATGCAGAGTGTATGATATGTCTCTCAGATTTCACAAAGGGTGAAAAGGTGCGCATTTTGCCTAAATGCAATCATGGTTTCCATGTTCGTTGCATCGACAAATGGCTAAAAGCACATTCATCATGCCCCAAGTGCAGACAGTGCCTCCTTGAGACTTGTCGAAAGATTGTTGGATCAGAAGCACCGCCTCCTATGTTGCCAGTGCCGGAATCTATTATTAGGATTCAGCCACTAGACCATGAAGCTTTTGAATGTAACTATAGGGAAGAAAGCAGATAA

Protein sequence

>MS.gene030657.t1

MYASTSFTSPLLHELLVESHTRRLLFQNPIDYQSPTSSPVLTHNHNSTNSYFGAREFESNVVMIVAVLLCAIICSIALNSIVRCALNVAIINDSSSSSSSNSSPQLANKGIKKKALKTFPTVNYSTELKLPSLDAECMICLSDFTKGEKVRILPKCNHGFHVRCIDKWLKAHSSCPKCRQCLLETCRKIVGSEAPPPMLPVPESIIRIQPLDHEAFECNYREESR