AlfalfaGEDB | MS.gene70253

M. sativa cultivar XinJiangDaYe / MS.gene70253

KEGG: K19040
GO: -
PFAM: PF13639.9

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene70253.t1	XP_003630207.1	89.4	227	14	1	1	227	1	217	1.10E-107	399.4

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene70253.t1	Q6NML0	48.8	215	87	6	21	226	23	223	7.8e-46	185.3

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene70253.t1	G7LD44	89.4	227	14	1	1	227	1	217	7.8e-108	399.4

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR
MS.gene04932	MS.gene70253	0.820583	6.35E-53	-1.69E-46
MS.gene049549	MS.gene70253	0.84341	1.43E-58	-1.69E-46
MS.gene049609	MS.gene70253	-0.810889	9.21E-51	-1.69E-46
MS.gene050096	MS.gene70253	0.801363	9.33E-49	-1.69E-46
MS.gene050772	MS.gene70253	-0.800956	1.13E-48	-1.69E-46
MS.gene051131	MS.gene70253	0.806956	6.40E-50	-1.69E-46
MS.gene051651	MS.gene70253	0.804491	2.11E-49	-1.69E-46
MS.gene052211	MS.gene70253	0.852142	5.60E-61	-1.69E-46
MS.gene05240	MS.gene70253	0.835123	2.02E-56	-1.69E-46
MS.gene052606	MS.gene70253	0.824006	1.02E-53	-1.69E-46
MS.gene053403	MS.gene70253	0.803707	3.07E-49	-1.69E-46
MS.gene053406	MS.gene70253	0.825516	4.49E-54	-1.69E-46
MS.gene053420	MS.gene70253	0.81023	1.28E-50	-1.69E-46
MS.gene053574	MS.gene70253	-0.805057	1.60E-49	-1.69E-46
MS.gene053887	MS.gene70253	0.837747	4.33E-57	-1.69E-46
MS.gene054146	MS.gene70253	0.85545	6.26E-62	-1.69E-46
MS.gene054181	MS.gene70253	0.803524	3.35E-49	-1.69E-46
MS.gene054421	MS.gene70253	0.806387	8.43E-50	-1.69E-46
MS.gene054706	MS.gene70253	0.817669	2.92E-52	-1.69E-46
MS.gene05470	MS.gene70253	-0.804286	2.32E-49	-1.69E-46
MS.gene054742	MS.gene70253	0.814866	1.24E-51	-1.69E-46
MS.gene055154	MS.gene70253	0.805218	1.48E-49	-1.69E-46
MS.gene055240	MS.gene70253	0.820063	8.36E-53	-1.69E-46
MS.gene05589	MS.gene70253	-0.801693	7.98E-49	-1.69E-46
MS.gene056218	MS.gene70253	0.823586	1.28E-53	-1.69E-46
MS.gene056224	MS.gene70253	0.80447	2.13E-49	-1.69E-46
MS.gene056330	MS.gene70253	0.80364	3.17E-49	-1.69E-46
MS.gene056504	MS.gene70253	-0.800864	1.18E-48	-1.69E-46
MS.gene056590	MS.gene70253	0.814113	1.82E-51	-1.69E-46
MS.gene056591	MS.gene70253	0.816778	4.64E-52	-1.69E-46
MS.gene056748	MS.gene70253	0.821038	4.99E-53	-1.69E-46
MS.gene056856	MS.gene70253	0.806457	8.15E-50	-1.69E-46
MS.gene056920	MS.gene70253	0.808683	2.75E-50	-1.69E-46
MS.gene057544	MS.gene70253	0.804442	2.16E-49	-1.69E-46
MS.gene058419	MS.gene70253	-0.800081	1.70E-48	-1.69E-46
MS.gene058603	MS.gene70253	0.834224	3.39E-56	-1.69E-46
MS.gene058838	MS.gene70253	-0.818124	2.31E-52	-1.69E-46
MS.gene059865	MS.gene70253	-0.801924	7.16E-49	-1.69E-46
MS.gene059953	MS.gene70253	0.841675	4.12E-58	-1.69E-46
MS.gene059955	MS.gene70253	0.832499	9.13E-56	-1.69E-46
MS.gene060087	MS.gene70253	0.830966	2.18E-55	-1.69E-46
MS.gene060593	MS.gene70253	0.804179	2.45E-49	-1.69E-46

PPI:

Gene1	Gene2	Type
MS.gene70253	MS.gene70249	PPI
MS.gene030658	MS.gene70253	PPI
MS.gene70253	MS.gene28430	PPI
MS.gene70253	MS.gene58108	PPI
MS.gene58109	MS.gene70253	PPI
MS.gene70253	MS.gene030655	PPI
MS.gene70253	MS.gene31002	PPI
MS.gene70253	MS.gene030652	PPI
MS.gene70253	MS.gene70254	PPI
MS.gene70256	MS.gene70253	PPI
MS.gene70253	MS.gene28428	PPI
MS.gene70253	MS.gene030660	PPI
MS.gene70253	MS.gene28427	PPI
MS.gene70253	MS.gene58109	PPI
MS.gene70253	MS.gene030654	PPI
MS.gene70253	MS.gene030653	PPI
MS.gene70253	MS.gene58107	PPI
MS.gene70253	MS.gene58110	PPI
MS.gene70253	MS.gene28431	PPI
MS.gene70253	MS.gene030656	PPI
MS.gene70253	MS.gene58104	PPI
MS.gene70253	MS.gene06444	PPI
MS.gene70253	MS.gene70257	PPI
MS.gene70253	MS.gene58105	PPI
MS.gene70253	MS.gene030657	PPI
MS.gene70253	MS.gene70255	PPI
MS.gene58111	MS.gene70253	PPI
MS.gene28426	MS.gene70253	PPI
MS.gene06444	MS.gene70253	PPI
MS.gene70253	MS.gene030659	PPI
MS.gene58108	MS.gene70253	PPI
MS.gene70253	MS.gene94889	PPI
MS.gene70253	MS.gene28429	PPI
MS.gene70253	MS.gene58106	PPI
MS.gene70249	MS.gene70253	PPI
MS.gene70253	MS.gene013346	PPI
MS.gene70253	MS.gene28425	PPI
MS.gene70253	MS.gene88015	PPI
MS.gene70253	MS.gene70250	PPI
MS.gene70253	MS.gene48772	PPI
MS.gene049319	MS.gene70253	PPI
MS.gene70253	MS.gene28424	PPI
MS.gene70253	MS.gene030651	PPI
MS.gene70253	MS.gene76770	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene70253.t1	MTR_8g092970	89.427	227	14	1	1	227	1	217	1.00e-139	390
MS.gene70253.t1	MTR_8g092840	82.743	226	38	1	1	226	1	225	1.40e-127	360
MS.gene70253.t1	MTR_8g092930	80.617	227	42	1	1	227	1	225	4.63e-126	356
MS.gene70253.t1	MTR_8g093010	80.349	229	33	5	1	227	1	219	6.26e-124	350
MS.gene70253.t1	MTR_8g092985	81.776	214	34	2	1	213	1	210	1.26e-117	334
MS.gene70253.t1	MTR_8g092990	82.018	228	39	2	1	227	1	227	4.06e-114	326
MS.gene70253.t1	MTR_8g092960	73.894	226	48	2	1	226	1	215	7.06e-113	322
MS.gene70253.t1	MTR_3g095560	62.393	234	74	4	1	227	1	227	1.26e-96	282
MS.gene70253.t1	MTR_3g094000	50.000	148	65	3	53	198	36	176	1.52e-43	144
MS.gene70253.t1	MTR_7g073200	48.611	144	65	3	45	187	18	153	7.62e-40	135
MS.gene70253.t1	MTR_5g024730	43.558	163	72	5	54	207	26	177	1.04e-35	125
MS.gene70253.t1	MTR_3g116000	47.143	140	66	4	58	195	26	159	1.40e-35	125
MS.gene70253.t1	MTR_8g073120	43.750	144	68	4	54	194	19	152	2.82e-32	116
MS.gene70253.t1	MTR_2g035800	37.419	155	84	3	30	184	4	145	2.58e-31	113
MS.gene70253.t1	MTR_4g094725	37.255	153	85	3	33	184	7	149	1.21e-29	108
MS.gene70253.t1	MTR_1g043410	30.102	196	116	7	30	216	11	194	2.36e-23	95.9
MS.gene70253.t1	MTR_7g113800	35.714	154	74	6	44	187	28	166	3.16e-21	90.9
MS.gene70253.t1	MTR_3g110190	37.313	134	77	4	59	189	11	140	1.95e-20	88.6
MS.gene70253.t1	MTR_1g082550	32.192	146	92	2	44	187	33	173	7.45e-20	87.0
MS.gene70253.t1	MTR_3g071300	32.192	146	92	2	44	186	10	151	1.86e-19	82.4
MS.gene70253.t1	MTR_8g023400	36.522	115	66	3	114	223	92	204	4.57e-19	84.3
MS.gene70253.t1	MTR_4g120270	45.205	73	37	1	111	183	77	146	5.60e-19	83.2
MS.gene70253.t1	MTR_7g117540	46.667	75	38	1	115	189	77	149	1.71e-18	82.4
MS.gene70253.t1	MTR_5g064980	36.641	131	74	4	61	186	56	182	1.74e-18	83.6
MS.gene70253.t1	MTR_6g087150	32.716	162	100	4	24	184	9	162	2.31e-18	82.8
MS.gene70253.t1	MTR_5g064990	29.143	175	116	5	52	221	55	226	2.54e-18	82.8
MS.gene70253.t1	MTR_1g100737	44.578	83	42	1	112	190	90	172	3.82e-18	79.7
MS.gene70253.t1	MTR_6g055030	42.857	84	46	1	102	183	85	168	8.45e-18	80.9
MS.gene70253.t1	MTR_3g099650	42.308	78	43	1	112	187	105	182	9.54e-18	81.3
MS.gene70253.t1	MTR_2g096350	62.500	48	18	0	136	183	130	177	1.34e-17	78.6
MS.gene70253.t1	MTR_4g063070	31.288	163	103	2	30	183	216	378	1.96e-17	80.5
MS.gene70253.t1	MTR_3g464780	40.404	99	49	2	92	187	87	178	2.15e-17	79.0
MS.gene70253.t1	MTR_2g436100	45.205	73	39	1	111	183	90	161	5.61e-17	78.2
MS.gene70253.t1	MTR_2g055790	33.333	123	72	2	65	187	34	146	6.02e-17	76.3
MS.gene70253.t1	MTR_5g082940	40.860	93	47	2	95	186	63	148	7.54e-17	75.5
MS.gene70253.t1	MTR_3g078450	35.714	112	69	2	92	202	54	163	7.78e-17	76.6
MS.gene70253.t1	MTR_7g116220	40.000	80	46	1	111	188	67	146	1.12e-16	75.5
MS.gene70253.t1	MTR_5g066250	35.135	111	59	2	112	222	132	229	1.24e-16	78.2
MS.gene70253.t1	MTR_1g492830	40.789	76	45	0	113	188	60	135	1.28e-16	76.3
MS.gene70253.t1	MTR_4g030070	36.364	88	54	1	104	191	75	160	1.72e-16	75.9
MS.gene70253.t1	MTR_8g066780	30.198	202	111	7	26	219	44	223	2.07e-16	77.4
MS.gene70253.t1	MTR_5g071930	42.553	94	48	3	113	206	65	152	2.19e-16	74.7
MS.gene70253.t1	MTR_3g100400	44.444	72	39	1	112	183	128	198	3.90e-16	76.6
MS.gene70253.t1	MTR_4g129420	41.772	79	46	0	109	187	112	190	4.18e-16	77.0
MS.gene70253.t1	MTR_5g064890	31.034	116	78	2	73	187	86	200	4.24e-16	76.3
MS.gene70253.t1	MTR_7g076250	40.278	72	43	0	112	183	61	132	7.38e-16	73.2
MS.gene70253.t1	MTR_3g086700	41.250	80	45	1	109	186	41	120	8.47e-16	73.2
MS.gene70253.t1	MTR_7g108855	38.043	92	48	2	115	197	67	158	9.17e-16	73.2
MS.gene70253.t1	MTR_8g089880	38.750	80	48	1	114	193	127	205	1.21e-15	74.3
MS.gene70253.t1	MTR_1g070140	41.026	78	44	2	107	183	96	172	1.47e-15	74.7
MS.gene70253.t1	MTR_8g074900	33.645	107	59	2	87	186	124	225	1.54e-15	73.2
MS.gene70253.t1	MTR_4g056590	37.079	89	49	3	111	199	97	178	1.63e-15	72.4
MS.gene70253.t1	MTR_3g086730	41.250	80	45	1	109	186	41	120	1.67e-15	73.2
MS.gene70253.t1	MTR_4g093830	34.259	108	60	2	114	221	126	222	1.86e-15	74.7
MS.gene70253.t1	MTR_5g026730	28.659	164	108	5	49	208	2	160	2.00e-15	72.0
MS.gene70253.t1	MTR_3g114500	33.058	121	73	3	63	183	1	113	2.95e-15	70.1
MS.gene70253.t1	MTR_1g074190	37.363	91	52	1	106	191	91	181	3.98e-15	73.6
MS.gene70253.t1	MTR_6g007737	31.852	135	82	3	61	186	71	204	4.59e-15	73.6
MS.gene70253.t1	MTR_5g030010	28.333	180	111	5	61	223	59	237	6.25e-15	73.2
MS.gene70253.t1	MTR_2g009310	44.286	70	38	1	114	183	135	203	8.25e-15	72.8
MS.gene70253.t1	MTR_5g034790	41.558	77	44	1	110	186	112	187	1.23e-14	72.4
MS.gene70253.t1	MTR_2g090950	32.653	98	61	1	91	183	68	165	1.72e-14	70.5
MS.gene70253.t1	MTR_3g078470	31.200	125	81	2	67	186	25	149	1.83e-14	70.1
MS.gene70253.t1	MTR_8g099495	40.260	77	45	1	108	183	313	389	2.25e-14	71.6
MS.gene70253.t1	MTR_5g009190	40.000	80	47	1	105	183	257	336	2.44e-14	71.2
MS.gene70253.t1	MTR_5g009210	40.000	80	47	1	105	183	278	357	3.29e-14	70.9
MS.gene70253.t1	MTR_5g022920	39.474	76	45	1	112	186	159	234	3.86e-14	69.7
MS.gene70253.t1	MTR_8g063660	39.241	79	47	1	110	188	64	141	4.63e-14	70.5
MS.gene70253.t1	MTR_8g032690	40.580	69	38	1	141	209	19	84	4.66e-14	66.2
MS.gene70253.t1	MTR_7g116180	40.260	77	42	2	113	186	66	141	4.93e-14	68.2
MS.gene70253.t1	MTR_2g090905	40.260	77	41	1	112	183	37	113	5.39e-14	66.6
MS.gene70253.t1	MTR_6g007680	43.662	71	39	1	113	183	39	108	6.42e-14	67.4
MS.gene70253.t1	MTR_8g028465	41.429	70	38	1	114	183	90	156	7.83e-14	68.2
MS.gene70253.t1	MTR_5g076990	32.061	131	77	3	62	183	21	148	8.94e-14	69.3
MS.gene70253.t1	MTR_1g070425	40.260	77	42	2	113	186	67	142	9.67e-14	67.4
MS.gene70253.t1	MTR_4g106680	28.030	132	85	2	61	183	44	174	9.81e-14	69.3
MS.gene70253.t1	MTR_1g056350	33.333	96	60	2	110	202	70	164	1.28e-13	67.0
MS.gene70253.t1	MTR_5g009200	32.258	124	78	2	61	183	274	392	1.30e-13	69.3
MS.gene70253.t1	MTR_5g026720	55.814	43	19	0	141	183	93	135	1.62e-13	66.2
MS.gene70253.t1	MTR_3g091620	31.200	125	69	4	111	223	98	217	1.96e-13	68.9
MS.gene70253.t1	MTR_3g012550	26.119	134	95	2	51	183	20	150	1.97e-13	66.6
MS.gene70253.t1	MTR_1g026070	36.486	74	43	1	110	183	44	113	2.09e-13	65.5
MS.gene70253.t1	MTR_6g007670	40.260	77	41	2	110	183	1	75	2.22e-13	67.8
MS.gene70253.t1	MTR_6g007670	48.611	72	35	2	113	183	144	214	1.34e-12	65.5
MS.gene70253.t1	MTR_5g092790	43.836	73	38	2	113	183	156	227	2.37e-13	67.4
MS.gene70253.t1	MTR_2g041200	45.161	62	34	0	122	183	90	151	2.83e-13	66.2
MS.gene70253.t1	MTR_7g079290	32.143	84	54	1	113	193	124	207	6.00e-13	65.9
MS.gene70253.t1	MTR_8g099515	44.444	72	37	2	114	183	309	379	6.79e-13	67.4
MS.gene70253.t1	MTR_8g071815	53.333	45	21	0	139	183	88	132	1.16e-12	64.3
MS.gene70253.t1	MTR_7g059360	45.614	57	31	0	128	184	145	201	1.47e-12	65.1
MS.gene70253.t1	MTR_3g087900	44.444	72	35	3	117	187	48	115	2.24e-12	63.2
MS.gene70253.t1	MTR_5g092750	45.205	73	37	2	113	183	156	227	2.28e-12	64.7
MS.gene70253.t1	MTR_7g079280	36.364	77	48	1	114	189	80	156	2.43e-12	63.5
MS.gene70253.t1	MTR_3g091200	38.028	71	43	1	114	183	303	373	2.50e-12	65.9
MS.gene70253.t1	MTR_4g108830	34.000	100	61	3	86	184	122	217	2.58e-12	64.3
MS.gene70253.t1	MTR_4g108830	35.165	91	55	2	95	184	102	189	2.91e-12	63.5
MS.gene70253.t1	MTR_8g066740	41.892	74	40	1	113	183	75	148	6.40e-12	63.9
MS.gene70253.t1	MTR_4g116460	41.096	73	33	4	117	183	415	483	1.16e-11	63.9
MS.gene70253.t1	MTR_4g116460	41.096	73	33	4	117	183	458	526	1.21e-11	63.9
MS.gene70253.t1	MTR_3g081030	32.673	101	64	2	93	193	75	171	1.37e-11	62.0
MS.gene70253.t1	MTR_1g090480	37.975	79	46	1	114	189	72	150	1.43e-11	61.2
MS.gene70253.t1	MTR_3g078120	32.540	126	82	3	61	183	2	127	1.63e-11	60.8
MS.gene70253.t1	MTR_7g096690	26.667	135	81	4	61	183	14	142	2.01e-11	62.8
MS.gene70253.t1	MTR_7g116200	38.028	71	42	1	113	183	67	135	2.25e-11	60.8
MS.gene70253.t1	MTR_6g055030	56.098	41	18	0	143	183	97	137	2.52e-11	62.4
MS.gene70253.t1	MTR_2g079320	36.250	80	46	1	112	186	125	204	3.78e-11	60.8
MS.gene70253.t1	MTR_8g019710	54.545	44	20	0	140	183	53	96	4.81e-11	59.3
MS.gene70253.t1	MTR_4g022410	48.214	56	29	0	128	183	100	155	4.94e-11	60.1
MS.gene70253.t1	MTR_7g117350	34.667	75	44	1	114	183	290	364	5.75e-11	61.6
MS.gene70253.t1	MTR_7g117350	34.667	75	44	1	114	183	282	356	5.81e-11	61.6
MS.gene70253.t1	MTR_8g009190	50.000	48	24	0	140	187	104	151	6.47e-11	61.2
MS.gene70253.t1	MTR_2g044570	42.593	54	31	0	140	193	82	135	7.81e-11	60.8
MS.gene70253.t1	MTR_1g096780	37.500	72	43	2	114	184	208	278	9.06e-11	61.2
MS.gene70253.t1	MTR_3g078540	41.270	63	36	1	128	189	66	128	9.55e-11	58.5

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene70253.t1	AT1G49230	48.402	219	93	3	11	225	17	219	1.91e-65	202
MS.gene70253.t1	AT1G49220	48.402	219	90	6	11	220	13	217	1.24e-62	196
MS.gene70253.t1	AT1G49200	44.828	232	105	6	4	226	7	224	6.46e-60	188
MS.gene70253.t1	AT1G49210	47.664	214	91	4	21	226	23	223	3.06e-59	186
MS.gene70253.t1	AT3G18773	43.556	225	109	5	6	226	8	218	1.73e-54	174
MS.gene70253.t1	AT5G05280	48.026	152	71	2	46	197	26	169	4.70e-44	146
MS.gene70253.t1	AT3G10910	51.493	134	60	4	57	187	29	160	2.10e-40	137
MS.gene70253.t1	AT1G20823	42.012	169	80	4	23	187	3	157	1.07e-37	130
MS.gene70253.t1	AT1G76410	41.436	181	101	2	41	220	8	184	1.34e-37	130
MS.gene70253.t1	AT5G01880	48.592	142	60	4	57	197	30	159	2.58e-30	110
MS.gene70253.t1	AT4G17245	40.458	131	62	2	54	183	30	145	1.70e-28	105
MS.gene70253.t1	AT2G17450	40.000	135	63	3	58	186	25	147	4.66e-28	105
MS.gene70253.t1	AT5G47610	38.406	138	65	3	46	183	32	149	6.50e-27	102
MS.gene70253.t1	AT4G35480	37.500	152	73	5	58	194	23	167	1.19e-25	99.4
MS.gene70253.t1	AT3G05200	30.088	226	120	7	24	222	18	232	9.89e-22	92.8
MS.gene70253.t1	AT1G72200	32.571	175	92	7	45	213	47	201	4.15e-21	90.9
MS.gene70253.t1	AT4G40070	34.177	158	93	4	64	216	49	200	6.15e-20	86.7
MS.gene70253.t1	AT1G23980	34.682	173	92	8	34	187	20	190	6.07e-19	84.7
MS.gene70253.t1	AT4G09120	36.508	126	69	3	64	186	51	168	1.15e-18	83.6
MS.gene70253.t1	AT1G72310	48.718	78	38	1	110	187	98	173	4.14e-18	81.6
MS.gene70253.t1	AT3G16720	36.697	109	62	4	110	214	90	195	5.06e-18	81.3
MS.gene70253.t1	AT2G35000	34.815	135	81	4	58	187	49	181	6.16e-18	81.6
MS.gene70253.t1	AT1G53820	40.860	93	50	3	110	200	91	180	7.83e-18	80.9
MS.gene70253.t1	AT2G20030	48.571	70	35	1	114	183	98	166	1.32e-17	80.9
MS.gene70253.t1	AT4G09110	34.426	122	71	3	64	183	51	165	1.38e-17	80.1
MS.gene70253.t1	AT4G17905	34.783	138	73	4	61	183	62	197	1.39e-17	80.1
MS.gene70253.t1	AT2G46494	31.387	137	89	2	52	183	222	358	1.69e-17	80.5
MS.gene70253.t1	AT4G17905	34.783	138	73	4	61	183	88	223	1.86e-17	80.1
MS.gene70253.t1	AT3G14320	47.887	71	35	1	114	184	63	131	2.12e-17	77.8
MS.gene70253.t1	AT1G35330	31.783	129	82	3	64	186	46	174	2.14e-17	79.7
MS.gene70253.t1	AT4G15975	38.462	91	54	1	96	186	33	121	2.64e-17	78.2
MS.gene70253.t1	AT1G22500	32.847	137	87	2	53	187	31	164	2.80e-17	80.1
MS.gene70253.t1	AT5G27420	45.000	80	42	1	111	188	92	171	6.03e-17	79.0
MS.gene70253.t1	AT4G09130	46.154	78	40	1	111	186	88	165	7.70e-17	78.6
MS.gene70253.t1	AT4G17920	31.818	132	84	3	61	186	24	155	9.92e-17	77.4
MS.gene70253.t1	AT4G28890	45.714	70	37	1	114	183	97	165	1.16e-16	78.6
MS.gene70253.t1	AT5G57750	29.365	126	87	1	61	184	40	165	1.47e-16	75.9
MS.gene70253.t1	AT5G05810	45.833	72	38	1	112	183	118	188	1.57e-16	78.2
MS.gene70253.t1	AT2G18650	43.590	78	44	0	110	187	95	172	1.67e-16	78.2
MS.gene70253.t1	AT1G04360	31.061	132	82	2	61	183	45	176	1.75e-16	77.8
MS.gene70253.t1	AT3G03550	62.500	48	18	0	140	187	158	205	2.36e-16	77.0
MS.gene70253.t1	AT1G74410	38.462	91	55	1	96	186	132	221	2.69e-16	75.1
MS.gene70253.t1	AT4G30400	41.333	75	44	0	109	183	102	176	2.87e-16	77.4
MS.gene70253.t1	AT3G62690	31.183	186	111	6	37	216	7	181	4.22e-16	75.5
MS.gene70253.t1	AT4G10160	32.000	125	80	2	63	187	24	143	4.28e-16	74.7
MS.gene70253.t1	AT1G28040	36.449	107	60	3	85	183	189	295	4.70e-16	75.9
MS.gene70253.t1	AT5G17600	46.575	73	36	2	112	183	114	184	6.07e-16	76.3
MS.gene70253.t1	AT2G25410	31.765	170	105	5	18	183	207	369	9.39e-16	75.5
MS.gene70253.t1	AT4G09100	39.241	79	46	2	107	183	49	127	1.23e-15	71.2
MS.gene70253.t1	AT5G43420	30.556	144	78	3	61	183	38	180	1.38e-15	75.1
MS.gene70253.t1	AT2G34990	33.588	131	78	5	58	183	12	138	1.49e-15	74.3
MS.gene70253.t1	AT2G34990	33.588	131	78	5	58	183	34	160	1.55e-15	74.7
MS.gene70253.t1	AT5G06490	28.659	164	102	3	35	183	8	171	1.83e-15	72.4
MS.gene70253.t1	AT3G19140	37.143	105	61	2	80	184	23	122	2.40e-15	70.9
MS.gene70253.t1	AT5G66070	34.343	99	62	2	88	186	150	245	3.12e-15	72.8
MS.gene70253.t1	AT2G47560	34.752	141	85	3	44	183	16	150	3.46e-15	72.4
MS.gene70253.t1	AT2G27940	34.483	87	55	1	108	194	109	193	4.05e-15	72.4
MS.gene70253.t1	AT5G66070	42.105	76	41	2	111	186	149	221	5.68e-15	71.6
MS.gene70253.t1	AT5G66070	42.105	76	41	2	111	186	149	221	5.68e-15	71.6
MS.gene70253.t1	AT1G32361	37.500	104	60	3	83	186	101	199	8.17e-15	72.8
MS.gene70253.t1	AT2G46493	40.000	75	44	1	110	183	106	180	1.38e-14	69.7
MS.gene70253.t1	AT1G72220	28.667	150	93	4	64	200	92	240	1.51e-14	72.4
MS.gene70253.t1	AT4G10150	36.145	83	51	1	105	187	77	157	2.56e-14	70.1
MS.gene70253.t1	AT2G35910	37.079	89	55	1	114	202	121	208	2.71e-14	69.7
MS.gene70253.t1	AT3G48030	37.778	90	44	3	106	186	88	174	2.76e-14	70.5
MS.gene70253.t1	AT5G42200	39.189	74	44	1	110	183	74	146	3.17e-14	68.6
MS.gene70253.t1	AT3G48030	37.778	90	44	3	106	186	166	252	3.91e-14	70.9
MS.gene70253.t1	AT2G46495	40.789	76	43	1	110	183	259	334	4.36e-14	70.5
MS.gene70253.t1	AT2G46495	40.789	76	43	1	110	183	287	362	4.67e-14	70.9
MS.gene70253.t1	AT4G33565	44.286	70	37	1	140	207	216	285	5.77e-14	70.5
MS.gene70253.t1	AT1G35630	37.755	98	59	2	117	213	209	305	6.44e-14	70.1
MS.gene70253.t1	AT2G46160	37.349	83	45	1	114	189	104	186	9.28e-14	68.2
MS.gene70253.t1	AT2G46160	37.349	83	45	1	114	189	104	186	9.28e-14	68.2
MS.gene70253.t1	AT5G40250	26.897	145	88	3	61	187	45	189	1.16e-13	69.7
MS.gene70253.t1	AT1G35625	27.517	149	101	3	66	213	163	305	1.20e-13	69.3
MS.gene70253.t1	AT1G33480	31.532	111	71	3	105	214	66	172	1.20e-13	68.6
MS.gene70253.t1	AT4G35840	35.789	95	56	2	92	184	143	234	1.35e-13	68.2
MS.gene70253.t1	AT3G18930	37.209	86	45	2	114	190	120	205	1.35e-13	69.7
MS.gene70253.t1	AT3G18930	37.209	86	45	2	114	190	120	205	1.35e-13	69.7
MS.gene70253.t1	AT3G18930	37.209	86	45	2	114	190	120	205	1.35e-13	69.7
MS.gene70253.t1	AT5G10380	37.975	79	48	1	109	187	104	181	1.35e-13	68.9
MS.gene70253.t1	AT5G53110	40.845	71	41	1	114	183	302	372	1.47e-13	69.3
MS.gene70253.t1	AT5G58580	40.789	76	45	0	112	187	109	184	1.48e-13	68.9
MS.gene70253.t1	AT2G35420	40.278	72	42	1	112	183	75	145	1.50e-13	68.2
MS.gene70253.t1	AT5G07040	25.658	152	96	3	33	183	1	136	1.81e-13	66.2
MS.gene70253.t1	AT2G34000	32.520	123	78	2	67	184	12	134	2.24e-13	65.9
MS.gene70253.t1	AT3G61550	31.250	112	62	2	88	189	78	184	2.74e-13	67.0
MS.gene70253.t1	AT2G17730	31.313	99	62	2	92	184	141	239	3.67e-13	67.0
MS.gene70253.t1	AT5G46650	28.889	135	87	3	61	186	26	160	5.44e-13	67.0
MS.gene70253.t1	AT2G42360	29.167	144	97	2	41	183	11	150	5.98e-13	66.2
MS.gene70253.t1	AT4G26400	45.588	68	29	2	116	183	223	282	2.30e-12	65.9
MS.gene70253.t1	AT4G26400	45.588	68	29	2	116	183	223	282	2.30e-12	65.9
MS.gene70253.t1	AT3G11110	37.349	83	52	0	101	183	67	149	2.46e-12	63.2
MS.gene70253.t1	AT2G18670	34.667	75	49	0	109	183	78	152	2.53e-12	63.5
MS.gene70253.t1	AT5G36001	58.696	46	19	0	138	183	261	306	3.71e-12	65.1
MS.gene70253.t1	AT2G37580	37.179	78	44	1	106	183	112	184	4.08e-12	63.9
MS.gene70253.t1	AT1G53010	50.000	50	25	0	140	189	129	178	2.48e-11	60.8
MS.gene70253.t1	AT3G20395	35.106	94	58	1	93	186	126	216	3.10e-11	61.2
MS.gene70253.t1	AT2G42350	38.028	71	42	1	113	183	74	142	3.12e-11	61.2
MS.gene70253.t1	AT1G22670	36.111	72	44	2	114	184	205	275	4.58e-11	62.0
MS.gene70253.t1	AT4G09560	40.845	71	40	2	115	184	208	277	6.16e-11	61.6
MS.gene70253.t1	AT1G71980	31.111	90	60	2	114	202	205	293	8.63e-11	61.2

Find 45 sgRNAs with CRISPR-Local

Find 46 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
AATTCAACAGACTCAAATTT+TGG	0.170429	4.1:-8766792	MS.gene70253:CDS
TGAAATCCATGGTTGCATTT+AGG	0.236983	4.1:+8766456	None:intergenic
TTGCATTAAACTCCATTATA+AGG	0.292690	4.1:-8766701	MS.gene70253:CDS
ACCACTAGAACCTGAAGATT+TGG	0.300487	4.1:-8766289	MS.gene70253:CDS
CATTATAAGGTGTGCCTTAA+GGG	0.301317	4.1:-8766688	MS.gene70253:CDS
TGAATCGTTATAATAGTTTC+TGG	0.311667	4.1:+8766312	None:intergenic
CCATTATAAGGTGTGCCTTA+AGG	0.325361	4.1:-8766689	MS.gene70253:CDS
AGCAAATAAAAGCACATAAT+AGG	0.335356	4.1:+8766727	None:intergenic
CGAAGAGTCGTTGCTGTTGA+TGG	0.335905	4.1:+8766653	None:intergenic
TAGTTACGCTCCAAATCTTC+AGG	0.356200	4.1:+8766279	None:intergenic
CTTGAAACTTGTCGGAAGAT+TGG	0.358710	4.1:-8766369	MS.gene70253:CDS
CCTTAAGGCACACCTTATAA+TGG	0.373664	4.1:+8766689	None:intergenic
AAGATTTGGAGCGTAACTAT+AGG	0.385286	4.1:-8766275	MS.gene70253:CDS
CAACAACAATTCACCTCAAT+TGG	0.398418	4.1:-8766619	MS.gene70253:CDS
TCTGGCACTGGCAACACAAT+TGG	0.406141	4.1:+8766330	None:intergenic
GTTGGTGATTGATAATCAAT+TGG	0.420758	4.1:+8766843	None:intergenic
ACGTTCGTTGCATTGACAAA+TGG	0.439104	4.1:-8766434	MS.gene70253:CDS
AGATTTGGAGCGTAACTATA+GGG	0.450405	4.1:-8766274	MS.gene70253:CDS
AATGCCTTCTTGAAACTTGT+CGG	0.456546	4.1:-8766377	MS.gene70253:CDS
ACAAGAAGCTCATGGAGAAA+TGG	0.473383	4.1:+8766900	None:intergenic
GTTATAATAGTTTCTGGCAC+TGG	0.477505	4.1:+8766318	None:intergenic
CAGCTGAATAACTCACTGTT+GGG	0.480794	4.1:+8766559	None:intergenic
GTTTGTTAACACAGGGGAGC+TGG	0.485159	4.1:+8766821	None:intergenic
AGAAGGCATTGTCTACACTT+TGG	0.485230	4.1:+8766390	None:intergenic
ATTCCTTTGTTGACCAATTG+AGG	0.485311	4.1:+8766606	None:intergenic
TTGCATTGACAAATGGCTAA+AGG	0.492896	4.1:-8766427	MS.gene70253:CDS
GGCTACGTTTGAAACCCTTA+AGG	0.504858	4.1:+8766674	None:intergenic
TCGGAAGATTGGTGGGTCGC+AGG	0.513588	4.1:-8766358	MS.gene70253:CDS
GAAACTTGTCGGAAGATTGG+TGG	0.516541	4.1:-8766366	MS.gene70253:CDS
ATGGAGAAATGGTGAAGTAA+AGG	0.527824	4.1:+8766911	None:intergenic
TCAGCTGAATAACTCACTGT+TGG	0.529659	4.1:+8766558	None:intergenic
TTGTCGAATCTCGCACAAGA+AGG	0.564290	4.1:-8766881	MS.gene70253:CDS
AAACTTGTCGGAAGATTGGT+GGG	0.571944	4.1:-8766365	MS.gene70253:CDS
TTGTGATTGTTTGTTAACAC+AGG	0.572000	4.1:+8766813	None:intergenic
TCTTCCGACAAGTTTCAAGA+AGG	0.582332	4.1:+8766373	None:intergenic
TGTCTCTCAGAGTTCACAAA+GGG	0.586259	4.1:-8766498	MS.gene70253:CDS
TCCAAATCTTCAGGTTCTAG+TGG	0.587103	4.1:+8766288	None:intergenic
TGCAACGAACGTGAAATCCA+TGG	0.607145	4.1:+8766445	None:intergenic
TGTGATTGTTTGTTAACACA+GGG	0.607685	4.1:+8766814	None:intergenic
ATACACTCTATATCTAGACT+TGG	0.610683	4.1:+8766525	None:intergenic
TCACCTCAATTGGTCAACAA+AGG	0.615305	4.1:-8766609	MS.gene70253:CDS
GAGATTCGACAAGAAGCTCA+TGG	0.622395	4.1:+8766892	None:intergenic
GTTAACACAGGGGAGCTGGT+TGG	0.624144	4.1:+8766825	None:intergenic
ATGTCTCTCAGAGTTCACAA+AGG	0.686490	4.1:-8766499	MS.gene70253:CDS
GTGATTGTTTGTTAACACAG+GGG	0.719628	4.1:+8766815	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!	TGAATCGTTATAATAGTTTC+TGG	+	chr4.1:8766884-8766903	None:intergenic	25.0%
!	TTGCATTAAACTCCATTATA+AGG	-	chr4.1:8766492-8766511	MS.gene70253:CDS	25.0%
!!	AATTCAACAGACTCAAATTT+TGG	-	chr4.1:8766401-8766420	MS.gene70253:CDS	25.0%
!!	AGCAAATAAAAGCACATAAT+AGG	+	chr4.1:8766469-8766488	None:intergenic	25.0%
	ATACACTCTATATCTAGACT+TGG	+	chr4.1:8766671-8766690	None:intergenic	30.0%
!	ATTTTACCTAAATGCAACCA+TGG	-	chr4.1:8766731-8766750	MS.gene70253:CDS	30.0%
!	TGTGATTGTTTGTTAACACA+GGG	+	chr4.1:8766382-8766401	None:intergenic	30.0%
!	TTGTGATTGTTTGTTAACAC+AGG	+	chr4.1:8766383-8766402	None:intergenic	30.0%
!!	GTTGGTGATTGATAATCAAT+TGG	+	chr4.1:8766353-8766372	None:intergenic	30.0%
	AATGCCTTCTTGAAACTTGT+CGG	-	chr4.1:8766816-8766835	MS.gene70253:CDS	35.0%
	ATGGAGAAATGGTGAAGTAA+AGG	+	chr4.1:8766285-8766304	None:intergenic	35.0%
	ATTCCTTTGTTGACCAATTG+AGG	+	chr4.1:8766590-8766609	None:intergenic	35.0%
	CAACAACAATTCACCTCAAT+TGG	-	chr4.1:8766574-8766593	MS.gene70253:CDS	35.0%
	CATTATAAGGTGTGCCTTAA+GGG	-	chr4.1:8766505-8766524	MS.gene70253:CDS	35.0%
	TGAAATCCATGGTTGCATTT+AGG	+	chr4.1:8766740-8766759	None:intergenic	35.0%
!	AAGATTTGGAGCGTAACTAT+AGG	-	chr4.1:8766918-8766937	MS.gene70253:CDS	35.0%
!	AGATTTGGAGCGTAACTATA+GGG	-	chr4.1:8766919-8766938	MS.gene70253:CDS	35.0%
!	GTGATTGTTTGTTAACACAG+GGG	+	chr4.1:8766381-8766400	None:intergenic	35.0%
!	TTGCATTGACAAATGGCTAA+AGG	-	chr4.1:8766766-8766785	MS.gene70253:CDS	35.0%
!!	GTTATAATAGTTTCTGGCAC+TGG	+	chr4.1:8766878-8766897	None:intergenic	35.0%
	AAACTTGTCGGAAGATTGGT+GGG	-	chr4.1:8766828-8766847	MS.gene70253:CDS	40.0%
	ACAAGAAGCTCATGGAGAAA+TGG	+	chr4.1:8766296-8766315	None:intergenic	40.0%
	ACCACTAGAACCTGAAGATT+TGG	-	chr4.1:8766904-8766923	MS.gene70253:CDS	40.0%
	ATGTCTCTCAGAGTTCACAA+AGG	-	chr4.1:8766694-8766713	MS.gene70253:CDS	40.0%
	CAGCTGAATAACTCACTGTT+GGG	+	chr4.1:8766637-8766656	None:intergenic	40.0%
	CCATTATAAGGTGTGCCTTA+AGG	-	chr4.1:8766504-8766523	MS.gene70253:CDS	40.0%
	CCTTAAGGCACACCTTATAA+TGG	+	chr4.1:8766507-8766526	None:intergenic	40.0%
	CTTGAAACTTGTCGGAAGAT+TGG	-	chr4.1:8766824-8766843	MS.gene70253:CDS	40.0%
	TAGTTACGCTCCAAATCTTC+AGG	+	chr4.1:8766917-8766936	None:intergenic	40.0%
	TCACCTCAATTGGTCAACAA+AGG	-	chr4.1:8766584-8766603	MS.gene70253:CDS	40.0%
	TCAGCTGAATAACTCACTGT+TGG	+	chr4.1:8766638-8766657	None:intergenic	40.0%
	TCTTCCGACAAGTTTCAAGA+AGG	+	chr4.1:8766823-8766842	None:intergenic	40.0%
	TGTCTCTCAGAGTTCACAAA+GGG	-	chr4.1:8766695-8766714	MS.gene70253:CDS	40.0%
!	ACGTTCGTTGCATTGACAAA+TGG	-	chr4.1:8766759-8766778	MS.gene70253:CDS	40.0%
!	TCCAAATCTTCAGGTTCTAG+TGG	+	chr4.1:8766908-8766927	None:intergenic	40.0%
!!	AGAAGGCATTGTCTACACTT+TGG	+	chr4.1:8766806-8766825	None:intergenic	40.0%
	GAAACTTGTCGGAAGATTGG+TGG	-	chr4.1:8766827-8766846	MS.gene70253:CDS	45.0%
	GAGATTCGACAAGAAGCTCA+TGG	+	chr4.1:8766304-8766323	None:intergenic	45.0%
	TGCAACGAACGTGAAATCCA+TGG	+	chr4.1:8766751-8766770	None:intergenic	45.0%
	TTGTCGAATCTCGCACAAGA+AGG	-	chr4.1:8766312-8766331	MS.gene70253:CDS	45.0%
!	GGCTACGTTTGAAACCCTTA+AGG	+	chr4.1:8766522-8766541	None:intergenic	45.0%
!	CGAAGAGTCGTTGCTGTTGA+TGG	+	chr4.1:8766543-8766562	None:intergenic	50.0%
!	GTTTGTTAACACAGGGGAGC+TGG	+	chr4.1:8766375-8766394	None:intergenic	50.0%
!!	TCTGGCACTGGCAACACAAT+TGG	+	chr4.1:8766866-8766885	None:intergenic	50.0%
	GTTAACACAGGGGAGCTGGT+TGG	+	chr4.1:8766371-8766390	None:intergenic	55.0%
!	TCGGAAGATTGGTGGGTCGC+AGG	-	chr4.1:8766835-8766854	MS.gene70253:CDS	60.0%

Chromosome	Type	Strat	End	Strand	Name
chr4.1	gene	8766266	8766949	8766266	ID=MS.gene70253
chr4.1	mRNA	8766266	8766949	8766266	ID=MS.gene70253.t1;Parent=MS.gene70253
chr4.1	exon	8766266	8766949	8766266	ID=MS.gene70253.t1.exon1;Parent=MS.gene70253.t1
chr4.1	CDS	8766266	8766949	8766266	ID=cds.MS.gene70253.t1;Parent=MS.gene70253.t1

Gene Sequence

>MS.gene70253

ATGTATGCTTCTACTTCCTTTACTTCACCATTTCTCCATGAGCTTCTTGTCGAATCTCGCACAAGAAGGTTACTCTTTCAAAATCCAATTGATTATCAATCACCAACCAGCTCCCCTGTGTTAACAAACAATCACAATTCAACAGACTCAAATTTTGGAGCTCGTGAATTTGATTCAAATGTTGTGATGATAGTTGCTGTCCTATTATGTGCTTTTATTTGCTCACTTGCATTAAACTCCATTATAAGGTGTGCCTTAAGGGTTTCAAACGTAGCCATCAACAGCAACGACTCTTCGTTGAGTTCGAGCAACAACAATTCACCTCAATTGGTCAACAAAGGAATCAAGAAGAAAGTTCTCAAGAAATTCCCAACAGTGAGTTATTCAGCTGAGTTGAAGCTACCAAGTCTAGATATAGAGTGTATGATATGTCTCTCAGAGTTCACAAAGGGTGAAAAATTGCGCATTTTACCTAAATGCAACCATGGATTTCACGTTCGTTGCATTGACAAATGGCTAAAGGAACACTCATCATGTCCAAAGTGTAGACAATGCCTTCTTGAAACTTGTCGGAAGATTGGTGGGTCGCAGGTGCAACCAATTGTGTTGCCAGTGCCAGAAACTATTATAACGATTCAACCACTAGAACCTGAAGATTTGGAGCGTAACTATAGGGAAATATAA

Protein sequence

>MS.gene70253.t1

MYASTSFTSPFLHELLVESRTRRLLFQNPIDYQSPTSSPVLTNNHNSTDSNFGAREFDSNVVMIVAVLLCAFICSLALNSIIRCALRVSNVAINSNDSSLSSSNNNSPQLVNKGIKKKVLKKFPTVSYSAELKLPSLDIECMICLSEFTKGEKLRILPKCNHGFHVRCIDKWLKEHSSCPKCRQCLLETCRKIGGSQVQPIVLPVPETIITIQPLEPEDLERNYREI