AlfalfaGEDB | MS.gene030660

M. sativa cultivar XinJiangDaYe / MS.gene030660

KEGG: K19040
GO: -
PFAM: PF13639.9

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene030660.t1	PNY09869.1	82.3	226	40	0	1	226	1	226	5.20E-94	354

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene030660.t1	Q6NML0	43.7	215	100	4	21	226	23	225	8.0e-43	175.3

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene030660.t1	A0A2K3P3N4	82.3	226	40	0	1	226	1	226	3.8e-94	354.0

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR

PPI:

Gene1	Gene2	Type
MS.gene030651	MS.gene030660	PPI
MS.gene030660	MS.gene70254	PPI
MS.gene030657	MS.gene030660	PPI
MS.gene58109	MS.gene030660	PPI
MS.gene013346	MS.gene030660	PPI
MS.gene030656	MS.gene030660	PPI
MS.gene70257	MS.gene030660	PPI
MS.gene28424	MS.gene030660	PPI
MS.gene70256	MS.gene030660	PPI
MS.gene28430	MS.gene030660	PPI
MS.gene030660	MS.gene70255	PPI
MS.gene030660	MS.gene030653	PPI
MS.gene030660	MS.gene58110	PPI
MS.gene030660	MS.gene28431	PPI
MS.gene58111	MS.gene030660	PPI
MS.gene58106	MS.gene030660	PPI
MS.gene28426	MS.gene030660	PPI
MS.gene030660	MS.gene70257	PPI
MS.gene70250	MS.gene030660	PPI
MS.gene70253	MS.gene030660	PPI
MS.gene28427	MS.gene030660	PPI
MS.gene030660	MS.gene030657	PPI
MS.gene58104	MS.gene030660	PPI
MS.gene48772	MS.gene030660	PPI
MS.gene049319	MS.gene030660	PPI
MS.gene030660	MS.gene94889	PPI
MS.gene06444	MS.gene030660	PPI
MS.gene58108	MS.gene030660	PPI
MS.gene030660	MS.gene88015	PPI
MS.gene030660	MS.gene70250	PPI
MS.gene28428	MS.gene030660	PPI
MS.gene28429	MS.gene030660	PPI
MS.gene030652	MS.gene030660	PPI
MS.gene70249	MS.gene030660	PPI
MS.gene030659	MS.gene030660	PPI
MS.gene58105	MS.gene030660	PPI
MS.gene030660	MS.gene31002	PPI
MS.gene030655	MS.gene030660	PPI
MS.gene030660	MS.gene28430	PPI
MS.gene030654	MS.gene030660	PPI
MS.gene58107	MS.gene030660	PPI
MS.gene28425	MS.gene030660	PPI
MS.gene030658	MS.gene030660	PPI
MS.gene76770	MS.gene030660	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene030660.t1	MTR_8g092840	95.595	227	9	1	1	226	1	227	8.50e-148	410
MS.gene030660.t1	MTR_8g092960	84.000	225	25	3	1	224	1	215	1.90e-127	359
MS.gene030660.t1	MTR_8g093010	79.736	227	36	3	1	225	1	219	1.14e-126	357
MS.gene030660.t1	MTR_8g092970	79.646	226	36	2	1	225	1	217	3.45e-122	345
MS.gene030660.t1	MTR_8g092930	78.761	226	46	2	1	225	1	225	4.45e-119	338
MS.gene030660.t1	MTR_8g092990	78.070	228	48	2	1	226	1	228	8.10e-109	312
MS.gene030660.t1	MTR_8g092985	77.465	213	43	3	1	211	1	210	1.11e-106	306
MS.gene030660.t1	MTR_3g095560	62.338	231	77	3	1	225	1	227	6.27e-98	285
MS.gene030660.t1	MTR_7g073200	49.315	146	66	3	42	186	15	153	9.00e-44	145
MS.gene030660.t1	MTR_3g094000	54.412	136	56	2	53	187	36	166	1.10e-43	145
MS.gene030660.t1	MTR_3g116000	47.260	146	64	4	58	198	26	163	4.94e-36	126
MS.gene030660.t1	MTR_5g024730	47.445	137	62	3	57	191	29	157	7.70e-36	126
MS.gene030660.t1	MTR_8g073120	49.231	130	51	5	57	182	22	140	5.14e-34	121
MS.gene030660.t1	MTR_2g035800	38.961	154	82	3	30	183	4	145	7.22e-33	117
MS.gene030660.t1	MTR_4g094725	39.474	152	78	4	33	183	11	149	3.77e-30	109
MS.gene030660.t1	MTR_1g043410	28.931	159	96	4	34	183	16	166	9.67e-22	91.7
MS.gene030660.t1	MTR_7g113800	33.553	152	79	5	44	186	28	166	1.40e-20	89.0
MS.gene030660.t1	MTR_1g100737	44.898	98	50	1	96	189	75	172	1.67e-20	85.9
MS.gene030660.t1	MTR_1g082550	32.886	149	89	5	42	186	32	173	2.32e-19	85.9
MS.gene030660.t1	MTR_8g023400	45.570	79	40	2	113	190	92	168	2.47e-19	85.1
MS.gene030660.t1	MTR_3g110190	46.154	78	41	1	111	188	64	140	2.82e-19	85.1
MS.gene030660.t1	MTR_3g071300	30.872	149	96	3	56	200	22	167	7.34e-19	80.9
MS.gene030660.t1	MTR_6g055030	36.667	120	72	2	65	182	51	168	1.08e-18	83.2
MS.gene030660.t1	MTR_7g117540	57.895	57	24	0	132	188	93	149	2.95e-18	81.6
MS.gene030660.t1	MTR_4g120270	44.595	74	34	2	111	182	78	146	4.24e-18	80.9
MS.gene030660.t1	MTR_6g087150	32.468	154	94	2	30	183	19	162	4.95e-18	82.0
MS.gene030660.t1	MTR_5g064980	39.796	98	54	2	90	185	88	182	5.45e-18	82.0
MS.gene030660.t1	MTR_5g082940	37.405	131	72	4	80	209	44	165	7.69e-18	78.2
MS.gene030660.t1	MTR_4g063070	43.750	80	44	1	104	182	299	378	1.20e-17	80.9
MS.gene030660.t1	MTR_4g056590	43.590	78	39	2	112	189	99	171	1.63e-17	77.8
MS.gene030660.t1	MTR_3g099650	43.590	78	42	1	111	186	105	182	1.98e-17	80.5
MS.gene030660.t1	MTR_5g064890	32.759	116	75	2	73	186	86	200	3.10e-17	79.7
MS.gene030660.t1	MTR_7g116220	39.744	78	45	1	112	187	69	146	4.50e-17	76.3
MS.gene030660.t1	MTR_2g096350	61.702	47	18	0	136	182	131	177	4.70e-17	77.0
MS.gene030660.t1	MTR_5g071930	50.000	76	34	2	112	187	65	136	5.43e-17	76.6
MS.gene030660.t1	MTR_3g464780	43.590	78	41	1	112	186	101	178	6.07e-17	77.4
MS.gene030660.t1	MTR_3g078470	37.374	99	60	2	88	185	52	149	7.94e-17	76.6
MS.gene030660.t1	MTR_7g076250	38.393	112	60	3	111	221	61	164	9.16e-17	75.9
MS.gene030660.t1	MTR_4g030070	31.034	116	76	2	103	218	75	186	9.22e-17	76.6
MS.gene030660.t1	MTR_1g492830	37.079	89	56	0	99	187	47	135	1.33e-16	75.9
MS.gene030660.t1	MTR_4g129420	43.038	79	45	0	108	186	112	190	1.35e-16	78.6
MS.gene030660.t1	MTR_3g078450	39.130	92	55	1	95	185	58	149	3.27e-16	74.7
MS.gene030660.t1	MTR_5g030010	39.241	79	47	1	108	186	117	194	5.75e-16	76.3
MS.gene030660.t1	MTR_8g089880	37.500	80	49	1	113	192	127	205	5.87e-16	75.1
MS.gene030660.t1	MTR_2g436100	39.241	79	47	1	104	182	84	161	6.53e-16	75.1
MS.gene030660.t1	MTR_8g066780	33.333	162	82	5	26	182	44	184	7.28e-16	75.9
MS.gene030660.t1	MTR_7g116180	39.744	78	45	1	110	185	64	141	9.10e-16	72.8
MS.gene030660.t1	MTR_3g100400	43.056	72	40	1	111	182	128	198	1.14e-15	75.5
MS.gene030660.t1	MTR_2g055790	32.787	122	73	2	65	186	34	146	1.19e-15	72.8
MS.gene030660.t1	MTR_1g074190	31.967	122	69	3	81	190	62	181	1.20e-15	75.1
MS.gene030660.t1	MTR_1g070425	39.744	78	45	1	110	185	65	142	1.40e-15	72.4
MS.gene030660.t1	MTR_4g093830	42.857	70	39	1	113	182	126	194	1.72e-15	74.7
MS.gene030660.t1	MTR_1g070140	38.961	77	47	0	106	182	96	172	2.86e-15	73.9
MS.gene030660.t1	MTR_2g090905	37.500	96	52	2	95	182	18	113	5.04e-15	69.3
MS.gene030660.t1	MTR_2g009310	60.000	45	18	0	138	182	159	203	5.29e-15	73.6
MS.gene030660.t1	MTR_2g090950	41.026	78	41	1	110	182	88	165	5.44e-15	72.0
MS.gene030660.t1	MTR_5g026730	30.714	140	78	4	53	182	6	136	5.56e-15	70.5
MS.gene030660.t1	MTR_5g064990	39.744	78	45	1	111	186	112	189	6.70e-15	73.2
MS.gene030660.t1	MTR_4g108830	34.694	98	62	1	86	183	122	217	7.82e-15	71.2
MS.gene030660.t1	MTR_2g041200	33.803	142	64	5	51	182	30	151	1.17e-14	69.7
MS.gene030660.t1	MTR_6g007737	31.852	135	81	3	61	185	71	204	1.20e-14	72.4
MS.gene030660.t1	MTR_7g079290	42.857	63	36	0	135	197	150	212	1.65e-14	70.1
MS.gene030660.t1	MTR_3g091620	41.892	74	42	1	113	186	101	173	2.18e-14	71.6
MS.gene030660.t1	MTR_5g066250	40.278	72	42	1	111	182	132	202	2.31e-14	71.6
MS.gene030660.t1	MTR_3g114500	38.554	83	47	2	100	182	35	113	2.50e-14	67.8
MS.gene030660.t1	MTR_5g034790	40.260	77	45	1	109	185	112	187	2.82e-14	71.2
MS.gene030660.t1	MTR_5g092790	43.421	76	40	2	109	182	153	227	3.09e-14	69.7
MS.gene030660.t1	MTR_3g086700	36.842	95	53	2	98	185	26	120	3.39e-14	68.9
MS.gene030660.t1	MTR_5g076990	35.115	131	75	3	59	182	21	148	4.12e-14	70.5
MS.gene030660.t1	MTR_5g009210	38.750	80	48	1	104	182	278	357	4.74e-14	70.5
MS.gene030660.t1	MTR_4g108830	34.375	96	61	1	88	183	96	189	5.72e-14	68.2
MS.gene030660.t1	MTR_4g106680	38.667	75	45	1	108	182	101	174	6.02e-14	69.7
MS.gene030660.t1	MTR_8g028465	38.571	70	40	1	113	182	90	156	6.09e-14	68.6
MS.gene030660.t1	MTR_7g108855	37.234	94	49	3	114	198	67	159	6.43e-14	68.2
MS.gene030660.t1	MTR_1g056350	39.726	73	40	2	113	182	74	145	6.96e-14	67.4
MS.gene030660.t1	MTR_8g074900	41.333	75	39	1	111	185	156	225	7.86e-14	68.6
MS.gene030660.t1	MTR_8g099495	38.462	78	47	1	107	183	313	390	9.31e-14	70.1
MS.gene030660.t1	MTR_3g086730	36.842	95	53	2	98	185	26	120	9.88e-14	68.6
MS.gene030660.t1	MTR_8g063660	37.975	79	48	1	109	187	64	141	9.96e-14	69.3
MS.gene030660.t1	MTR_5g009190	37.500	80	49	1	104	182	257	336	1.07e-13	69.3
MS.gene030660.t1	MTR_3g091200	39.437	71	42	1	113	182	303	373	1.38e-13	69.3
MS.gene030660.t1	MTR_3g012550	27.407	135	89	3	52	182	21	150	2.14e-13	66.2
MS.gene030660.t1	MTR_6g007670	41.096	73	41	1	110	182	5	75	2.41e-13	67.4
MS.gene030660.t1	MTR_6g007670	43.662	71	40	0	112	182	144	214	5.40e-12	63.9
MS.gene030660.t1	MTR_5g022920	37.662	77	47	1	110	185	158	234	2.69e-13	67.0
MS.gene030660.t1	MTR_7g059360	43.478	69	38	1	116	183	133	201	2.77e-13	67.0
MS.gene030660.t1	MTR_5g026720	53.488	43	20	0	140	182	93	135	2.92e-13	65.5
MS.gene030660.t1	MTR_6g007680	39.726	73	43	1	110	182	37	108	4.69e-13	65.1
MS.gene030660.t1	MTR_7g079280	32.143	112	62	3	113	223	80	178	4.83e-13	65.5
MS.gene030660.t1	MTR_8g032690	41.667	96	39	4	140	226	19	106	5.38e-13	63.5
MS.gene030660.t1	MTR_5g092750	43.421	76	40	2	109	182	153	227	7.34e-13	65.9
MS.gene030660.t1	MTR_5g009200	39.437	71	42	1	113	182	322	392	7.70e-13	67.0
MS.gene030660.t1	MTR_8g019710	60.000	45	18	0	138	182	52	96	8.63e-13	63.9
MS.gene030660.t1	MTR_2g079320	32.075	106	67	1	85	185	99	204	9.93e-13	65.1
MS.gene030660.t1	MTR_3g087900	49.231	65	28	3	123	186	55	115	1.02e-12	63.9
MS.gene030660.t1	MTR_8g066740	32.824	131	78	3	59	182	21	148	1.31e-12	66.2
MS.gene030660.t1	MTR_1g026070	36.111	72	42	1	111	182	46	113	1.40e-12	63.2
MS.gene030660.t1	MTR_7g116200	38.356	73	43	1	110	182	65	135	3.13e-12	63.2
MS.gene030660.t1	MTR_8g071815	53.488	43	20	0	140	182	90	132	3.64e-12	63.2
MS.gene030660.t1	MTR_3g078120	36.905	84	52	1	100	182	44	127	5.21e-12	62.0
MS.gene030660.t1	MTR_4g022410	32.292	96	65	0	103	198	76	171	5.25e-12	62.8
MS.gene030660.t1	MTR_8g099515	41.667	72	39	2	113	182	309	379	6.27e-12	64.7
MS.gene030660.t1	MTR_3g081030	33.673	98	60	3	103	200	86	178	1.15e-11	62.4
MS.gene030660.t1	MTR_7g117350	34.667	75	44	1	113	182	290	364	1.21e-11	63.5
MS.gene030660.t1	MTR_7g117350	34.667	75	44	1	113	182	282	356	1.26e-11	63.5
MS.gene030660.t1	MTR_8g027745	36.620	71	44	1	113	182	286	356	1.54e-11	63.2
MS.gene030660.t1	MTR_5g096410	37.778	90	41	3	110	185	238	326	1.83e-11	62.8
MS.gene030660.t1	MTR_5g096410	37.778	90	41	3	110	185	250	338	1.91e-11	62.8
MS.gene030660.t1	MTR_5g096410	37.778	90	41	3	110	185	247	335	1.99e-11	62.8
MS.gene030660.t1	MTR_7g096690	32.500	80	51	2	106	182	63	142	2.01e-11	62.8
MS.gene030660.t1	MTR_6g055030	53.659	41	19	0	142	182	97	137	3.76e-11	61.6
MS.gene030660.t1	MTR_4g106960	54.000	50	22	1	133	182	171	219	4.27e-11	62.0
MS.gene030660.t1	MTR_5g041310	56.818	44	18	1	139	182	114	156	4.50e-11	60.8
MS.gene030660.t1	MTR_4g106960	54.000	50	22	1	133	182	171	219	4.65e-11	61.6
MS.gene030660.t1	MTR_4g106960	54.000	50	22	1	133	182	228	276	5.27e-11	62.0
MS.gene030660.t1	MTR_7g116210	36.986	73	44	1	110	182	7	77	5.72e-11	58.2
MS.gene030660.t1	MTR_4g106960	54.000	50	22	1	133	182	228	276	5.95e-11	61.6
MS.gene030660.t1	MTR_8g027980	33.333	75	48	1	116	188	93	167	6.35e-11	60.8
MS.gene030660.t1	MTR_5g041330	56.818	44	18	1	139	182	104	146	6.70e-11	60.1
MS.gene030660.t1	MTR_3g078540	41.270	63	36	1	127	188	66	128	7.45e-11	58.9
MS.gene030660.t1	MTR_4g116460	38.571	70	39	3	116	182	415	483	8.51e-11	61.2
MS.gene030660.t1	MTR_4g116460	38.571	70	39	3	116	182	458	526	9.37e-11	61.2

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene030660.t1	AT1G49230	52.752	218	83	4	11	223	17	219	7.09e-72	218
MS.gene030660.t1	AT1G49210	47.907	215	91	4	21	226	23	225	5.75e-62	193
MS.gene030660.t1	AT1G49220	48.792	207	80	5	21	214	23	216	3.95e-61	192
MS.gene030660.t1	AT1G49200	46.296	216	93	5	21	226	24	226	1.58e-60	189
MS.gene030660.t1	AT3G18773	44.053	227	107	7	6	226	8	220	3.49e-55	176
MS.gene030660.t1	AT5G05280	52.817	142	60	2	46	187	26	160	2.44e-45	149
MS.gene030660.t1	AT3G10910	54.135	133	57	2	57	186	29	160	1.22e-42	142
MS.gene030660.t1	AT1G20823	42.771	166	82	3	23	186	3	157	2.41e-38	132
MS.gene030660.t1	AT1G76410	44.371	151	75	2	41	188	8	152	9.53e-38	130
MS.gene030660.t1	AT5G01880	45.198	177	71	5	12	187	1	152	1.53e-31	113
MS.gene030660.t1	AT2G17450	41.912	136	58	4	58	185	25	147	7.67e-31	112
MS.gene030660.t1	AT5G47610	36.875	160	89	2	23	182	2	149	2.38e-29	108
MS.gene030660.t1	AT4G35480	39.456	147	69	3	54	186	19	159	2.91e-28	106
MS.gene030660.t1	AT4G17245	39.098	133	66	3	51	182	27	145	4.65e-25	97.1
MS.gene030660.t1	AT3G05200	33.333	156	97	3	65	213	49	204	2.49e-20	88.6
MS.gene030660.t1	AT1G72200	33.117	154	96	5	56	204	58	209	1.44e-19	86.7
MS.gene030660.t1	AT2G27940	39.604	101	58	2	99	199	101	198	1.55e-19	84.3
MS.gene030660.t1	AT1G72310	48.718	78	38	1	109	186	98	173	2.98e-19	85.1
MS.gene030660.t1	AT4G09120	35.115	131	77	3	54	182	41	165	1.64e-18	83.2
MS.gene030660.t1	AT1G53820	44.872	78	39	2	109	185	91	165	2.41e-18	82.4
MS.gene030660.t1	AT4G09110	34.711	121	71	3	64	182	51	165	2.92e-18	82.0
MS.gene030660.t1	AT3G14320	49.296	71	34	1	113	183	63	131	3.54e-18	79.7
MS.gene030660.t1	AT1G35330	34.351	131	75	5	64	185	46	174	4.08e-18	81.6
MS.gene030660.t1	AT4G40070	36.154	130	78	3	64	191	49	175	7.45e-18	80.9
MS.gene030660.t1	AT3G16720	36.893	103	59	3	109	211	90	186	1.16e-17	80.1
MS.gene030660.t1	AT1G22500	30.000	150	101	3	53	200	31	178	2.77e-17	80.1
MS.gene030660.t1	AT5G57750	41.333	75	44	0	109	183	91	165	3.27e-17	77.4
MS.gene030660.t1	AT4G30400	42.667	75	43	0	108	182	102	176	4.19e-17	79.7
MS.gene030660.t1	AT1G28040	37.374	99	59	2	87	182	197	295	4.35e-17	78.6
MS.gene030660.t1	AT1G04360	29.771	131	82	2	62	182	46	176	4.60e-17	79.3
MS.gene030660.t1	AT1G74410	38.000	100	55	2	86	185	129	221	7.25e-17	76.6
MS.gene030660.t1	AT2G35000	32.576	132	82	4	61	186	51	181	9.50e-17	78.6
MS.gene030660.t1	AT5G27420	45.570	79	39	2	112	187	94	171	9.53e-17	78.2
MS.gene030660.t1	AT2G20030	47.143	70	36	1	113	182	98	166	1.79e-16	77.8
MS.gene030660.t1	AT2G18650	43.590	78	44	0	109	186	95	172	2.18e-16	77.8
MS.gene030660.t1	AT4G17905	66.667	45	15	0	138	182	179	223	2.18e-16	77.0
MS.gene030660.t1	AT4G17905	66.667	45	15	0	138	182	153	197	2.20e-16	76.6
MS.gene030660.t1	AT1G23980	31.250	176	93	7	34	186	20	190	2.83e-16	77.0
MS.gene030660.t1	AT4G09100	40.506	79	45	2	106	182	49	127	3.03e-16	72.8
MS.gene030660.t1	AT5G17600	43.056	72	40	1	111	182	114	184	3.51e-16	76.6
MS.gene030660.t1	AT4G15975	37.363	91	55	1	95	185	33	121	3.96e-16	75.1
MS.gene030660.t1	AT3G03550	59.184	49	20	0	138	186	157	205	3.96e-16	76.6
MS.gene030660.t1	AT2G25410	42.553	94	49	2	91	182	279	369	4.19e-16	76.6
MS.gene030660.t1	AT2G46493	34.653	101	63	2	85	182	80	180	4.51e-16	73.9
MS.gene030660.t1	AT4G09130	45.205	73	38	1	112	182	90	162	4.57e-16	76.3
MS.gene030660.t1	AT2G46494	29.197	137	91	2	52	182	222	358	9.49e-16	75.5
MS.gene030660.t1	AT4G28890	43.662	71	39	1	113	183	97	166	1.11e-15	75.5
MS.gene030660.t1	AT4G10150	30.000	130	85	3	57	186	34	157	1.94e-15	73.2
MS.gene030660.t1	AT5G05810	43.056	72	40	1	111	182	118	188	2.43e-15	74.7
MS.gene030660.t1	AT3G48030	37.931	87	48	1	105	185	88	174	2.49e-15	73.6
MS.gene030660.t1	AT2G35420	44.444	72	39	1	111	182	75	145	2.90e-15	72.8
MS.gene030660.t1	AT5G10380	39.241	79	47	1	108	186	104	181	3.42e-15	73.6
MS.gene030660.t1	AT1G32361	34.532	139	83	5	83	221	101	231	4.16e-15	73.6
MS.gene030660.t1	AT3G48030	37.931	87	48	1	105	185	166	252	4.36e-15	73.6
MS.gene030660.t1	AT3G19140	36.538	104	62	2	80	183	23	122	4.40e-15	70.1
MS.gene030660.t1	AT4G10160	32.283	127	74	4	64	186	25	143	4.89e-15	72.0
MS.gene030660.t1	AT3G18930	37.391	115	56	5	113	216	120	229	5.82e-15	73.6
MS.gene030660.t1	AT3G18930	37.391	115	56	5	113	216	120	229	5.82e-15	73.6
MS.gene030660.t1	AT3G18930	37.391	115	56	5	113	216	120	229	5.82e-15	73.6
MS.gene030660.t1	AT2G34990	29.771	131	90	1	54	182	8	138	6.31e-15	72.8
MS.gene030660.t1	AT2G34990	29.771	131	90	1	54	182	30	160	7.36e-15	72.8
MS.gene030660.t1	AT1G72220	57.778	45	19	0	138	182	175	219	1.04e-14	72.8
MS.gene030660.t1	AT5G43420	27.950	161	90	4	43	182	25	180	1.18e-14	72.4
MS.gene030660.t1	AT5G66070	44.000	75	39	2	111	185	150	221	1.39e-14	70.5
MS.gene030660.t1	AT5G66070	44.000	75	39	2	111	185	150	221	1.39e-14	70.5
MS.gene030660.t1	AT5G07040	27.612	134	84	3	52	183	15	137	1.56e-14	68.9
MS.gene030660.t1	AT5G66070	44.000	75	39	2	111	185	174	245	2.16e-14	70.5
MS.gene030660.t1	AT2G35910	39.474	76	45	1	113	188	121	195	2.24e-14	70.1
MS.gene030660.t1	AT4G17920	31.538	130	78	5	61	185	32	155	2.24e-14	70.9
MS.gene030660.t1	AT5G06490	33.663	101	52	2	113	207	96	187	2.63e-14	69.3
MS.gene030660.t1	AT5G42200	39.189	74	44	1	109	182	74	146	3.21e-14	68.2
MS.gene030660.t1	AT4G33565	52.941	51	24	0	138	188	215	265	3.39e-14	71.2
MS.gene030660.t1	AT3G62690	48.438	64	32	1	119	182	93	155	4.52e-14	69.7
MS.gene030660.t1	AT5G58580	34.653	101	66	0	111	211	109	209	4.93e-14	70.1
MS.gene030660.t1	AT1G33480	29.825	114	75	2	113	226	75	183	5.07e-14	69.7
MS.gene030660.t1	AT2G46495	40.789	76	43	1	109	182	259	334	6.06e-14	70.1
MS.gene030660.t1	AT2G46495	40.789	76	43	1	109	182	287	362	6.34e-14	70.5
MS.gene030660.t1	AT5G53110	39.437	71	42	1	113	182	302	372	7.95e-14	70.1
MS.gene030660.t1	AT5G36001	63.043	46	17	0	137	182	261	306	1.85e-13	68.6
MS.gene030660.t1	AT2G34000	26.984	126	87	2	61	183	11	134	2.39e-13	65.9
MS.gene030660.t1	AT2G46160	36.145	83	46	1	113	188	104	186	2.43e-13	67.0
MS.gene030660.t1	AT2G46160	36.145	83	46	1	113	188	104	186	2.43e-13	67.0
MS.gene030660.t1	AT2G47560	40.000	80	45	2	104	182	73	150	3.83e-13	66.6
MS.gene030660.t1	AT3G11110	37.349	83	52	0	100	182	67	149	6.02e-13	64.7
MS.gene030660.t1	AT5G40250	50.000	48	24	0	139	186	142	189	6.51e-13	67.4
MS.gene030660.t1	AT2G18670	34.667	75	49	0	108	182	78	152	6.98e-13	65.1
MS.gene030660.t1	AT4G35840	39.506	81	41	2	110	185	159	236	7.54e-13	65.9
MS.gene030660.t1	AT2G17730	38.158	76	45	1	110	183	164	239	1.48e-12	65.1
MS.gene030660.t1	AT2G42360	36.000	75	48	0	108	182	76	150	1.56e-12	65.1
MS.gene030660.t1	AT4G26400	39.506	81	41	2	102	182	210	282	1.78e-12	66.2
MS.gene030660.t1	AT4G26400	39.506	81	41	2	102	182	210	282	1.78e-12	66.2
MS.gene030660.t1	AT3G61550	30.400	125	68	4	106	220	92	207	2.70e-12	63.9
MS.gene030660.t1	AT4G26580	37.037	81	45	2	110	185	254	333	5.07e-12	64.7
MS.gene030660.t1	AT4G26580	37.037	81	45	2	110	185	254	333	5.07e-12	64.7
MS.gene030660.t1	AT2G42350	37.333	75	45	1	108	182	70	142	6.12e-12	63.2
MS.gene030660.t1	AT5G56340	44.118	68	30	2	115	182	241	300	6.93e-12	64.3
MS.gene030660.t1	AT3G20395	33.663	101	63	2	85	185	120	216	1.47e-11	62.4
MS.gene030660.t1	AT3G47990	54.000	50	22	1	133	182	171	219	1.93e-11	62.8
MS.gene030660.t1	AT3G47990	54.000	50	22	1	133	182	171	219	1.93e-11	62.8
MS.gene030660.t1	AT3G47990	54.000	50	22	1	133	182	171	219	1.93e-11	62.8
MS.gene030660.t1	AT3G47990	54.000	50	22	1	133	182	228	276	2.15e-11	62.8
MS.gene030660.t1	AT3G47990	54.000	50	22	1	133	182	212	260	2.29e-11	62.8
MS.gene030660.t1	AT1G35630	42.029	69	38	2	116	183	209	276	2.46e-11	62.4
MS.gene030660.t1	AT2G03000	51.064	47	22	1	139	185	480	525	2.75e-11	62.8
MS.gene030660.t1	AT1G53010	50.000	50	25	0	139	188	129	178	3.12e-11	60.5
MS.gene030660.t1	AT1G35625	28.571	133	81	4	52	183	157	276	9.12e-11	60.8

Find 47 sgRNAs with CRISPR-Local

Find 48 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
CCATCATAAGGTGCGCTTTA+AGG	0.098073	4.3:+8701384	MS.gene030660:CDS
AATTCAACCAACTCATATTT+TGG	0.106711	4.3:+8701281	MS.gene030660:CDS
TGAGTTGAAACTACCAAATT+TGG	0.175122	4.3:+8701532	MS.gene030660:CDS
ATTGATAATCAATTGGATTT+TGG	0.213343	4.3:-8701223	None:intergenic
GCACCTTATGATGGAGTTTA+AGG	0.230395	4.3:-8701375	None:intergenic
CGGTGCCAGAAACTATTATT+AGG	0.257137	4.3:+8701750	MS.gene030660:CDS
TGGAAACCATGATTGCATTT+AGG	0.272632	4.3:-8701614	None:intergenic
CGAAGAAGAGCCGTTGTTTA+GGG	0.291613	4.3:-8701420	None:intergenic
TCGAAGAAGAGCCGTTGTTT+AGG	0.297762	4.3:-8701421	None:intergenic
ACACACTCTGTATCCAAATT+TGG	0.302122	4.3:-8701545	None:intergenic
TGAATCCTAATAATAGTTTC+TGG	0.307133	4.3:-8701755	None:intergenic
AATATGAGTTGGTTGAATTA+TGG	0.317058	4.3:-8701277	None:intergenic
CAACAACTCTTCACCTCAAT+TGG	0.382798	4.3:+8701451	MS.gene030660:CDS
GAGACTTGTCGAAAGATTGT+TGG	0.413029	4.3:+8701704	MS.gene030660:CDS
GTTGGTGATTGATAATCAAT+TGG	0.420758	4.3:-8701230	None:intergenic
GGAAGCACCACCTATGTTGC+CGG	0.443914	4.3:+8701730	MS.gene030660:CDS
ATGTTCGTTGCATCGACAAA+TGG	0.447158	4.3:+8701636	MS.gene030660:CDS
ATAGTTACGTTCAAAAGCTT+CGG	0.462496	4.3:-8701789	None:intergenic
TTATGGTTGTGTGTGAGAAC+AGG	0.463446	4.3:-8701260	None:intergenic
AGCAAATAAGAGCACACAAT+AGG	0.463910	4.3:-8701346	None:intergenic
TCAGTTGAATAACTTACTGT+TGG	0.468597	4.3:-8701512	None:intergenic
ATTCCTTTGTTAGCCAATTG+AGG	0.468663	4.3:-8701464	None:intergenic
TTGTCGAAAGATTGTTGGAT+TGG	0.474737	4.3:+8701709	MS.gene030660:CDS
CCTTAAAGCGCACCTTATGA+TGG	0.477521	4.3:-8701384	None:intergenic
CAGTTGAATAACTTACTGTT+GGG	0.481542	4.3:-8701511	None:intergenic
GTGTGTGAGAACAGGGGAGC+TGG	0.495001	4.3:-8701252	None:intergenic
ACGAATTCCAAAATATGAGT+TGG	0.498815	4.3:-8701288	None:intergenic
TTGTAGAATCTCACACAAGA+AGG	0.511006	4.3:+8701192	MS.gene030660:CDS
TTGCCTTAAACTCCATCATA+AGG	0.515596	4.3:+8701372	MS.gene030660:CDS
ATGGAAGAGTGGTGAAGTAA+AGG	0.523047	4.3:-8701162	None:intergenic
CTAATAATAGTTTCTGGCAC+CGG	0.527248	4.3:-8701749	None:intergenic
GTTTCTGGCACCGGCAACAT+AGG	0.529637	4.3:-8701740	None:intergenic
TGTCTCTCAGAGTTCACAAA+AGG	0.544000	4.3:+8701572	MS.gene030660:CDS
TATGGTTGTGTGTGAGAACA+GGG	0.557986	4.3:-8701259	None:intergenic
ATTTGTCGATGCAACGAACA+TGG	0.562919	4.3:-8701634	None:intergenic
TAACAAAGGAATCAAGAAGA+AGG	0.567789	4.3:+8701475	MS.gene030660:CDS
AGGAGGCACTGTCTGCACTT+AGG	0.573168	4.3:-8701680	None:intergenic
GAGATTCTACAAGAAGCTCA+TGG	0.595637	4.3:-8701181	None:intergenic
CAATCTTTCGACAAGTCTCA+AGG	0.597223	4.3:-8701700	None:intergenic
TCACCTCAATTGGCTAACAA+AGG	0.606400	4.3:+8701461	MS.gene030660:CDS
TCAAAAGCTTCGGCGTCTAG+CGG	0.624371	4.3:-8701779	None:intergenic
ACAAGAAGCTCATGGAAGAG+TGG	0.629363	4.3:-8701173	None:intergenic
TCTGGCACCGGCAACATAGG+TGG	0.632227	4.3:-8701737	None:intergenic
GTGAGAACAGGGGAGCTGGT+TGG	0.655380	4.3:-8701248	None:intergenic
TCGAACGTAGCCCTAAACAA+CGG	0.719891	4.3:+8701410	MS.gene030660:CDS
ATGGTTGTGTGTGAGAACAG+GGG	0.776032	4.3:-8701258	None:intergenic
TCTTTCGACAAGTCTCAAGG+AGG	0.776052	4.3:-8701697	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	ATTGATAATCAATTGGATTT+TGG	-	chr4.3:8701226-8701245	None:intergenic	20.0%
!	TGAATCCTAATAATAGTTTC+TGG	-	chr4.3:8701758-8701777	None:intergenic	25.0%
!!	AATTCAACCAACTCATATTT+TGG	+	chr4.3:8701281-8701300	MS.gene030660:CDS	25.0%
!!	ATTTTACCTAAATGCAATCA+TGG	+	chr4.3:8701608-8701627	MS.gene030660:CDS	25.0%
!!!	AATATGAGTTGGTTGAATTA+TGG	-	chr4.3:8701280-8701299	None:intergenic	25.0%
	ACGAATTCCAAAATATGAGT+TGG	-	chr4.3:8701291-8701310	None:intergenic	30.0%
	ATAGTTACGTTCAAAAGCTT+CGG	-	chr4.3:8701792-8701811	None:intergenic	30.0%
	CAGTTGAATAACTTACTGTT+GGG	-	chr4.3:8701514-8701533	None:intergenic	30.0%
	TAACAAAGGAATCAAGAAGA+AGG	+	chr4.3:8701475-8701494	MS.gene030660:CDS	30.0%
	TCAGTTGAATAACTTACTGT+TGG	-	chr4.3:8701515-8701534	None:intergenic	30.0%
!	TGAGTTGAAACTACCAAATT+TGG	+	chr4.3:8701532-8701551	MS.gene030660:CDS	30.0%
!!	GTTGGTGATTGATAATCAAT+TGG	-	chr4.3:8701233-8701252	None:intergenic	30.0%
	ACACACTCTGTATCCAAATT+TGG	-	chr4.3:8701548-8701567	None:intergenic	35.0%
	ATTCCTTTGTTAGCCAATTG+AGG	-	chr4.3:8701467-8701486	None:intergenic	35.0%
	TGGAAACCATGATTGCATTT+AGG	-	chr4.3:8701617-8701636	None:intergenic	35.0%
	TTGCCTTAAACTCCATCATA+AGG	+	chr4.3:8701372-8701391	MS.gene030660:CDS	35.0%
	TTGTAGAATCTCACACAAGA+AGG	+	chr4.3:8701192-8701211	MS.gene030660:CDS	35.0%
	TTGTCGAAAGATTGTTGGAT+TGG	+	chr4.3:8701709-8701728	MS.gene030660:CDS	35.0%
!	AGCAAATAAGAGCACACAAT+AGG	-	chr4.3:8701349-8701368	None:intergenic	35.0%
!!	CTAATAATAGTTTCTGGCAC+CGG	-	chr4.3:8701752-8701771	None:intergenic	35.0%
	ATGGAAGAGTGGTGAAGTAA+AGG	-	chr4.3:8701165-8701184	None:intergenic	40.0%
	ATTTGTCGATGCAACGAACA+TGG	-	chr4.3:8701637-8701656	None:intergenic	40.0%
	CAACAACTCTTCACCTCAAT+TGG	+	chr4.3:8701451-8701470	MS.gene030660:CDS	40.0%
	CAATCTTTCGACAAGTCTCA+AGG	-	chr4.3:8701703-8701722	None:intergenic	40.0%
	GAGACTTGTCGAAAGATTGT+TGG	+	chr4.3:8701704-8701723	MS.gene030660:CDS	40.0%
	GAGATTCTACAAGAAGCTCA+TGG	-	chr4.3:8701184-8701203	None:intergenic	40.0%
	TATGGTTGTGTGTGAGAACA+GGG	-	chr4.3:8701262-8701281	None:intergenic	40.0%
	TCACCTCAATTGGCTAACAA+AGG	+	chr4.3:8701461-8701480	MS.gene030660:CDS	40.0%
	TGTCTCTCAGAGTTCACAAA+AGG	+	chr4.3:8701572-8701591	MS.gene030660:CDS	40.0%
	TTATGGTTGTGTGTGAGAAC+AGG	-	chr4.3:8701263-8701282	None:intergenic	40.0%
!	ATGTTCGTTGCATCGACAAA+TGG	+	chr4.3:8701636-8701655	MS.gene030660:CDS	40.0%
!	CGGTGCCAGAAACTATTATT+AGG	+	chr4.3:8701750-8701769	MS.gene030660:CDS	40.0%
!	GCACCTTATGATGGAGTTTA+AGG	-	chr4.3:8701378-8701397	None:intergenic	40.0%
	ACAAGAAGCTCATGGAAGAG+TGG	-	chr4.3:8701176-8701195	None:intergenic	45.0%
	ATGGTTGTGTGTGAGAACAG+GGG	-	chr4.3:8701261-8701280	None:intergenic	45.0%
	CCATCATAAGGTGCGCTTTA+AGG	+	chr4.3:8701384-8701403	MS.gene030660:CDS	45.0%
	CCTTAAAGCGCACCTTATGA+TGG	-	chr4.3:8701387-8701406	None:intergenic	45.0%
	CGAAGAAGAGCCGTTGTTTA+GGG	-	chr4.3:8701423-8701442	None:intergenic	45.0%
	TCGAACGTAGCCCTAAACAA+CGG	+	chr4.3:8701410-8701429	MS.gene030660:CDS	45.0%
	TCGAAGAAGAGCCGTTGTTT+AGG	-	chr4.3:8701424-8701443	None:intergenic	45.0%
	TCTTTCGACAAGTCTCAAGG+AGG	-	chr4.3:8701700-8701719	None:intergenic	45.0%
	TCAAAAGCTTCGGCGTCTAG+CGG	-	chr4.3:8701782-8701801	None:intergenic	50.0%
!!	AGGAGGCACTGTCTGCACTT+AGG	-	chr4.3:8701683-8701702	None:intergenic	55.0%
!!	GGAAGCACCACCTATGTTGC+CGG	+	chr4.3:8701730-8701749	MS.gene030660:CDS	55.0%
!!	GTTTCTGGCACCGGCAACAT+AGG	-	chr4.3:8701743-8701762	None:intergenic	55.0%
	GTGAGAACAGGGGAGCTGGT+TGG	-	chr4.3:8701251-8701270	None:intergenic	60.0%
	GTGTGTGAGAACAGGGGAGC+TGG	-	chr4.3:8701255-8701274	None:intergenic	60.0%
!!	TCTGGCACCGGCAACATAGG+TGG	-	chr4.3:8701740-8701759	None:intergenic	60.0%

Chromosome	Type	Strat	End	Strand	Name
chr4.3	gene	8701146	8701826	8701146	ID=MS.gene030660
chr4.3	mRNA	8701146	8701826	8701146	ID=MS.gene030660.t1;Parent=MS.gene030660
chr4.3	exon	8701146	8701826	8701146	ID=MS.gene030660.t1.exon1;Parent=MS.gene030660.t1
chr4.3	CDS	8701146	8701826	8701146	ID=cds.MS.gene030660.t1;Parent=MS.gene030660.t1

Gene Sequence

>MS.gene030660

ATGTATGCTTCTACTTCCTTTACTTCACCACTCTTCCATGAGCTTCTTGTAGAATCTCACACAAGAAGGTTGCTCTTCCAAAATCCAATTGATTATCAATCACCAACCAGCTCCCCTGTTCTCACACACAACCATAATTCAACCAACTCATATTTTGGAATTCGTGAATTTGATGCGAATGTTGTGATGATACTTGCAGTCCTATTGTGTGCTCTTATTTGCTCACTTGCCTTAAACTCCATCATAAGGTGCGCTTTAAGGTTTTCGAACGTAGCCCTAAACAACGGCTCTTCTTCGAGTTCAAGCAACAACTCTTCACCTCAATTGGCTAACAAAGGAATCAAGAAGAAGGCTCTCAAGACATTCCCAACAGTAAGTTATTCAACTGAGTTGAAACTACCAAATTTGGATACAGAGTGTGTGATATGTCTCTCAGAGTTCACAAAAGGTGAAAAAGTGCGCATTTTACCTAAATGCAATCATGGTTTCCATGTTCGTTGCATCGACAAATGGCTAAAAGCACACTCATCATGTCCTAAGTGCAGACAGTGCCTCCTTGAGACTTGTCGAAAGATTGTTGGATTGGAAGCACCACCTATGTTGCCGGTGCCAGAAACTATTATTAGGATTCAACCGCTAGACGCCGAAGCTTTTGAACGTAACTATAGAGAATTAAGCTGA

Protein sequence

>MS.gene030660.t1

MYASTSFTSPLFHELLVESHTRRLLFQNPIDYQSPTSSPVLTHNHNSTNSYFGIREFDANVVMILAVLLCALICSLALNSIIRCALRFSNVALNNGSSSSSSNNSSPQLANKGIKKKALKTFPTVSYSTELKLPNLDTECVICLSEFTKGEKVRILPKCNHGFHVRCIDKWLKAHSSCPKCRQCLLETCRKIVGLEAPPMLPVPETIIRIQPLDAEAFERNYRELS