AlfalfaGEDB | MS.gene030659

M. sativa cultivar XinJiangDaYe / MS.gene030659

KEGG: K19040
GO: -
PFAM: PF13639.9

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene030659.t1	GAU35065.1	86.4	228	30	1	1	228	1	227	4.30E-96	360.9

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene030659.t1	Q6NML0	44.7	215	99	4	21	227	23	225	8.1e-43	175.3

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene030659.t1	A0A2Z6NGL8	86.4	228	30	1	1	228	1	227	3.1e-96	360.9

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR

PPI:

Gene1	Gene2	Type
MS.gene28429	MS.gene030659	PPI
MS.gene030659	MS.gene030657	PPI
MS.gene030659	MS.gene70255	PPI
MS.gene70249	MS.gene030659	PPI
MS.gene030659	MS.gene58107	PPI
MS.gene58105	MS.gene030659	PPI
MS.gene48772	MS.gene030659	PPI
MS.gene030659	MS.gene58106	PPI
MS.gene049319	MS.gene030659	PPI
MS.gene030659	MS.gene013346	PPI
MS.gene030659	MS.gene70250	PPI
MS.gene06444	MS.gene030659	PPI
MS.gene28428	MS.gene030659	PPI
MS.gene030654	MS.gene030659	PPI
MS.gene58107	MS.gene030659	PPI
MS.gene76770	MS.gene030659	PPI
MS.gene030659	MS.gene94889	PPI
MS.gene030659	MS.gene28425	PPI
MS.gene58109	MS.gene030659	PPI
MS.gene030659	MS.gene28430	PPI
MS.gene030659	MS.gene88015	PPI
MS.gene030659	MS.gene030651	PPI
MS.gene70256	MS.gene030659	PPI
MS.gene030659	MS.gene030655	PPI
MS.gene030659	MS.gene31002	PPI
MS.gene030658	MS.gene030659	PPI
MS.gene030659	MS.gene030652	PPI
MS.gene030659	MS.gene70254	PPI
MS.gene030659	MS.gene030660	PPI
MS.gene013346	MS.gene030659	PPI
MS.gene030656	MS.gene030659	PPI
MS.gene030659	MS.gene28427	PPI
MS.gene70253	MS.gene030659	PPI
MS.gene030659	MS.gene030653	PPI
MS.gene28424	MS.gene030659	PPI
MS.gene030659	MS.gene58110	PPI
MS.gene030659	MS.gene28431	PPI
MS.gene030659	MS.gene030656	PPI
MS.gene030659	MS.gene58104	PPI
MS.gene030659	MS.gene70257	PPI
MS.gene58111	MS.gene030659	PPI
MS.gene28426	MS.gene030659	PPI
MS.gene58108	MS.gene030659	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene030659.t1	MTR_8g092840	92.105	228	18	0	1	228	1	228	1.05e-146	408
MS.gene030659.t1	MTR_8g092960	82.456	228	30	2	1	228	1	218	2.54e-129	363
MS.gene030659.t1	MTR_8g093010	79.736	227	35	4	1	225	1	218	1.04e-120	342
MS.gene030659.t1	MTR_8g092970	78.222	225	40	1	1	225	1	216	1.06e-115	329
MS.gene030659.t1	MTR_8g092930	78.222	225	48	1	1	225	1	224	2.31e-114	326
MS.gene030659.t1	MTR_8g092990	81.416	226	41	1	1	225	1	226	5.42e-113	323
MS.gene030659.t1	MTR_8g092985	76.526	213	46	2	1	212	1	210	5.46e-105	302
MS.gene030659.t1	MTR_3g095560	62.500	232	74	5	1	225	1	226	6.87e-92	270
MS.gene030659.t1	MTR_3g094000	51.471	136	60	2	53	187	36	166	5.30e-39	133
MS.gene030659.t1	MTR_7g073200	46.296	162	68	5	45	198	18	168	1.90e-38	132
MS.gene030659.t1	MTR_3g116000	47.619	147	68	5	56	200	24	163	1.36e-34	122
MS.gene030659.t1	MTR_5g024730	44.785	163	73	6	56	210	28	181	2.85e-34	122
MS.gene030659.t1	MTR_2g035800	38.961	154	82	3	30	183	4	145	4.50e-31	112
MS.gene030659.t1	MTR_8g073120	48.062	129	54	4	57	182	22	140	5.10e-31	113
MS.gene030659.t1	MTR_4g094725	38.158	152	84	3	33	183	7	149	7.07e-29	106
MS.gene030659.t1	MTR_7g113800	34.868	152	77	5	44	186	28	166	4.28e-20	87.8
MS.gene030659.t1	MTR_3g110190	37.209	129	74	3	66	188	13	140	4.97e-20	87.4
MS.gene030659.t1	MTR_1g043410	28.000	150	93	3	43	183	23	166	1.01e-19	86.3
MS.gene030659.t1	MTR_1g082550	32.680	153	84	4	42	186	32	173	1.25e-19	86.7
MS.gene030659.t1	MTR_1g100737	38.636	132	69	2	62	189	49	172	5.29e-19	82.0
MS.gene030659.t1	MTR_8g023400	45.570	79	40	2	113	190	92	168	5.50e-19	84.3
MS.gene030659.t1	MTR_7g117540	32.308	130	86	1	59	188	22	149	7.24e-19	83.2
MS.gene030659.t1	MTR_3g071300	32.576	132	83	2	57	185	23	151	1.34e-18	80.1
MS.gene030659.t1	MTR_6g055030	33.951	162	88	5	24	182	23	168	1.87e-18	82.8
MS.gene030659.t1	MTR_4g120270	43.836	73	38	1	110	182	77	146	1.89e-18	82.0
MS.gene030659.t1	MTR_5g064980	31.507	146	87	3	42	185	48	182	8.52e-18	81.6
MS.gene030659.t1	MTR_5g082940	46.053	76	40	1	111	185	73	148	1.97e-17	77.0
MS.gene030659.t1	MTR_6g087150	34.375	160	83	5	30	183	19	162	2.28e-17	80.1
MS.gene030659.t1	MTR_8g066780	32.317	164	91	4	68	219	58	213	3.18e-17	79.7
MS.gene030659.t1	MTR_7g116220	40.000	80	46	1	110	187	67	146	3.30e-17	76.6
MS.gene030659.t1	MTR_1g492830	28.994	169	101	3	53	221	14	163	3.30e-17	77.8
MS.gene030659.t1	MTR_3g099650	43.590	78	42	1	111	186	105	182	4.54e-17	79.3
MS.gene030659.t1	MTR_4g056590	41.250	80	42	2	110	189	97	171	4.61e-17	76.6
MS.gene030659.t1	MTR_2g096350	60.417	48	19	0	135	182	130	177	5.11e-17	77.0
MS.gene030659.t1	MTR_4g063070	40.741	81	47	1	103	182	298	378	8.03e-17	78.6
MS.gene030659.t1	MTR_5g071930	48.684	76	35	2	112	187	65	136	1.11e-16	75.9
MS.gene030659.t1	MTR_3g078450	34.307	137	83	3	88	223	51	181	1.46e-16	75.9
MS.gene030659.t1	MTR_3g464780	42.308	78	42	1	112	186	101	178	1.78e-16	76.3
MS.gene030659.t1	MTR_4g030070	30.081	123	81	2	103	225	75	192	2.20e-16	75.5
MS.gene030659.t1	MTR_4g129420	43.038	79	45	0	108	186	112	190	3.85e-16	77.0
MS.gene030659.t1	MTR_2g436100	42.466	73	41	1	110	182	90	161	5.04e-16	75.5
MS.gene030659.t1	MTR_5g064890	28.859	149	97	4	46	186	53	200	7.56e-16	75.9
MS.gene030659.t1	MTR_7g076250	29.688	128	82	3	56	182	12	132	8.79e-16	73.2
MS.gene030659.t1	MTR_3g078470	38.144	97	58	2	90	185	54	149	9.97e-16	73.6
MS.gene030659.t1	MTR_5g030010	39.506	81	48	1	106	186	115	194	1.04e-15	75.5
MS.gene030659.t1	MTR_8g089880	37.500	80	49	1	113	192	127	205	1.45e-15	73.9
MS.gene030659.t1	MTR_3g100400	43.056	72	40	1	111	182	128	198	1.62e-15	75.1
MS.gene030659.t1	MTR_7g116180	38.667	75	44	1	113	185	67	141	3.54e-15	71.2
MS.gene030659.t1	MTR_4g093830	42.857	70	39	1	113	182	126	194	4.83e-15	73.6
MS.gene030659.t1	MTR_2g055790	32.283	127	73	2	60	186	33	146	4.98e-15	71.2
MS.gene030659.t1	MTR_3g012550	26.627	169	109	5	52	218	21	176	5.15e-15	70.9
MS.gene030659.t1	MTR_1g070425	38.667	75	44	1	113	185	68	142	5.46e-15	70.9
MS.gene030659.t1	MTR_5g026730	30.216	139	80	5	53	182	6	136	5.89e-15	70.5
MS.gene030659.t1	MTR_3g114500	33.636	110	67	3	75	182	8	113	8.18e-15	68.9
MS.gene030659.t1	MTR_2g009310	60.000	45	18	0	138	182	159	203	1.07e-14	72.8
MS.gene030659.t1	MTR_1g070140	37.500	80	48	2	107	185	97	175	1.39e-14	72.0
MS.gene030659.t1	MTR_7g108855	38.298	94	48	3	114	198	67	159	1.42e-14	70.1
MS.gene030659.t1	MTR_5g064990	39.744	78	45	1	111	186	112	189	1.76e-14	72.0
MS.gene030659.t1	MTR_3g091620	43.243	74	41	1	113	186	101	173	2.34e-14	71.6
MS.gene030659.t1	MTR_5g026720	30.508	118	75	3	72	182	18	135	2.56e-14	68.6
MS.gene030659.t1	MTR_5g066250	40.278	72	42	1	111	182	132	202	3.39e-14	71.2
MS.gene030659.t1	MTR_3g086700	36.364	99	57	2	93	185	22	120	4.88e-14	68.6
MS.gene030659.t1	MTR_4g108830	35.354	99	60	2	86	183	122	217	6.11e-14	68.6
MS.gene030659.t1	MTR_2g090905	41.558	77	40	1	111	182	37	113	6.27e-14	66.6
MS.gene030659.t1	MTR_5g009190	38.272	81	49	1	103	182	256	336	7.22e-14	70.1
MS.gene030659.t1	MTR_6g007737	30.370	135	83	3	61	185	71	204	7.36e-14	70.1
MS.gene030659.t1	MTR_5g076990	34.109	129	79	3	59	182	21	148	8.43e-14	69.3
MS.gene030659.t1	MTR_4g106680	28.235	170	100	3	34	182	6	174	8.90e-14	69.3
MS.gene030659.t1	MTR_1g056350	37.179	78	45	2	108	182	69	145	9.04e-14	67.4
MS.gene030659.t1	MTR_1g074190	30.894	123	71	3	80	190	61	181	9.21e-14	69.7
MS.gene030659.t1	MTR_8g028465	38.571	70	40	1	113	182	90	156	9.38e-14	67.8
MS.gene030659.t1	MTR_5g009210	38.750	80	48	1	104	182	278	357	1.02e-13	69.7
MS.gene030659.t1	MTR_8g099495	40.506	79	45	2	106	183	313	390	1.07e-13	69.7
MS.gene030659.t1	MTR_5g034790	40.260	77	45	1	109	185	112	187	1.14e-13	69.7
MS.gene030659.t1	MTR_2g041200	50.909	55	27	0	128	182	97	151	1.15e-13	67.0
MS.gene030659.t1	MTR_3g086730	38.750	80	47	1	108	185	41	120	1.39e-13	68.2
MS.gene030659.t1	MTR_2g090950	28.671	143	97	1	45	182	23	165	1.82e-13	67.8
MS.gene030659.t1	MTR_8g074900	41.333	75	39	1	111	185	156	225	2.08e-13	67.4
MS.gene030659.t1	MTR_6g007670	35.052	97	50	3	109	202	1	87	2.31e-13	67.8
MS.gene030659.t1	MTR_6g007670	42.254	71	41	0	112	182	144	214	6.41e-11	60.8
MS.gene030659.t1	MTR_3g091200	39.437	71	42	1	113	182	303	373	3.15e-13	68.2
MS.gene030659.t1	MTR_4g108830	35.052	97	59	2	88	183	96	189	3.49e-13	66.2
MS.gene030659.t1	MTR_7g079290	42.623	61	35	0	137	197	152	212	3.96e-13	66.2
MS.gene030659.t1	MTR_8g063660	37.975	79	48	1	109	187	64	141	3.97e-13	67.8
MS.gene030659.t1	MTR_5g092790	43.836	73	38	2	112	182	156	227	3.97e-13	66.6
MS.gene030659.t1	MTR_5g009200	40.845	71	41	1	113	182	322	392	5.07e-13	67.8
MS.gene030659.t1	MTR_7g059360	45.455	66	35	1	119	183	136	201	5.61e-13	66.2
MS.gene030659.t1	MTR_1g026070	36.486	74	43	1	109	182	44	113	6.10e-13	63.9
MS.gene030659.t1	MTR_7g079280	36.620	71	44	1	113	182	80	150	1.04e-12	64.7
MS.gene030659.t1	MTR_8g032690	48.077	52	27	0	140	191	19	70	1.30e-12	62.8
MS.gene030659.t1	MTR_5g022920	38.158	76	46	1	111	185	159	234	1.45e-12	65.1
MS.gene030659.t1	MTR_4g022410	30.882	136	87	3	63	198	43	171	1.65e-12	64.3
MS.gene030659.t1	MTR_8g019710	57.778	45	19	0	138	182	52	96	1.85e-12	63.2
MS.gene030659.t1	MTR_6g007680	40.845	71	41	1	112	182	39	108	2.91e-12	62.8
MS.gene030659.t1	MTR_7g116200	39.437	71	41	1	112	182	67	135	3.30e-12	63.2
MS.gene030659.t1	MTR_5g092750	62.791	43	16	0	140	182	185	227	3.81e-12	63.9
MS.gene030659.t1	MTR_8g099515	40.845	71	41	1	113	182	309	379	4.95e-12	65.1
MS.gene030659.t1	MTR_8g027745	35.897	78	49	1	106	182	279	356	5.89e-12	64.7
MS.gene030659.t1	MTR_8g071815	53.488	43	20	0	140	182	90	132	6.37e-12	62.4
MS.gene030659.t1	MTR_8g066740	32.824	131	78	3	59	182	21	148	6.51e-12	63.9
MS.gene030659.t1	MTR_3g087900	47.692	65	29	3	123	186	55	115	7.20e-12	62.0
MS.gene030659.t1	MTR_3g078120	31.200	125	81	4	61	182	5	127	9.82e-12	61.2
MS.gene030659.t1	MTR_7g117350	34.667	75	44	1	113	182	290	364	1.73e-11	63.2
MS.gene030659.t1	MTR_7g117350	34.667	75	44	1	113	182	282	356	1.78e-11	63.2
MS.gene030659.t1	MTR_3g081030	35.000	80	50	1	119	198	100	177	1.80e-11	62.0
MS.gene030659.t1	MTR_2g079320	32.432	111	66	2	82	185	96	204	1.97e-11	61.6
MS.gene030659.t1	MTR_5g041310	36.264	91	44	3	93	182	79	156	3.38e-11	61.2
MS.gene030659.t1	MTR_4g106960	54.000	50	22	1	133	182	171	219	5.40e-11	61.6
MS.gene030659.t1	MTR_4g106960	54.000	50	22	1	133	182	171	219	5.99e-11	61.6
MS.gene030659.t1	MTR_6g055030	53.659	41	19	0	142	182	97	137	6.06e-11	61.2
MS.gene030659.t1	MTR_7g116210	38.028	71	42	1	112	182	9	77	6.20e-11	58.2
MS.gene030659.t1	MTR_8g009190	28.358	134	85	3	60	186	22	151	6.71e-11	61.2
MS.gene030659.t1	MTR_4g106960	54.000	50	22	1	133	182	228	276	6.97e-11	61.6
MS.gene030659.t1	MTR_4g106960	54.000	50	22	1	133	182	228	276	7.30e-11	61.2
MS.gene030659.t1	MTR_8g027980	33.333	75	48	1	116	188	93	167	8.95e-11	60.5
MS.gene030659.t1	MTR_1g090480	30.534	131	85	2	61	188	23	150	8.97e-11	58.9

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene030659.t1	AT1G49230	51.174	213	85	4	11	219	17	214	6.14e-65	201
MS.gene030659.t1	AT1G49210	46.977	215	94	4	21	227	23	225	2.67e-59	186
MS.gene030659.t1	AT1G49200	45.581	215	97	4	21	227	24	226	2.93e-59	186
MS.gene030659.t1	AT1G49220	50.556	180	72	3	21	195	23	190	6.03e-58	184
MS.gene030659.t1	AT3G18773	44.144	222	105	7	11	227	13	220	3.34e-53	171
MS.gene030659.t1	AT5G05280	52.113	142	61	2	46	187	26	160	1.88e-43	144
MS.gene030659.t1	AT3G10910	48.718	156	63	5	49	201	26	167	1.09e-39	135
MS.gene030659.t1	AT1G20823	43.114	167	80	5	23	186	3	157	1.65e-36	127
MS.gene030659.t1	AT1G76410	43.243	148	81	2	41	188	8	152	7.46e-35	122
MS.gene030659.t1	AT5G01880	40.860	186	82	6	12	196	1	159	3.19e-28	105
MS.gene030659.t1	AT2G17450	41.045	134	62	3	58	185	25	147	4.69e-28	105
MS.gene030659.t1	AT4G35480	37.079	178	87	5	54	217	19	185	7.89e-27	102
MS.gene030659.t1	AT5G47610	35.625	160	91	3	23	182	2	149	9.10e-26	99.0
MS.gene030659.t1	AT4G17245	41.270	126	57	3	59	182	35	145	3.50e-23	92.0
MS.gene030659.t1	AT4G40070	34.000	150	90	3	64	209	49	193	1.16e-19	86.3
MS.gene030659.t1	AT1G22500	35.664	143	83	4	59	198	40	176	1.48e-19	86.3
MS.gene030659.t1	AT1G72310	48.718	78	38	1	109	186	98	173	1.02e-18	83.6
MS.gene030659.t1	AT1G72200	31.875	160	88	5	57	212	59	201	4.59e-18	82.4
MS.gene030659.t1	AT3G14320	47.887	71	35	1	113	183	63	131	7.79e-18	79.0
MS.gene030659.t1	AT3G05200	34.028	144	87	3	48	187	36	175	7.92e-18	81.6
MS.gene030659.t1	AT1G53820	44.872	78	39	2	109	185	91	165	8.85e-18	80.9
MS.gene030659.t1	AT2G27940	35.185	108	67	2	99	206	101	205	1.54e-17	79.0
MS.gene030659.t1	AT1G28040	37.500	104	62	2	82	182	192	295	1.62e-17	79.7
MS.gene030659.t1	AT5G57750	32.283	127	81	2	61	183	40	165	2.06e-17	78.2
MS.gene030659.t1	AT4G09110	33.058	121	73	2	64	182	51	165	5.03e-17	78.6
MS.gene030659.t1	AT2G35000	32.331	133	86	2	58	186	49	181	5.53e-17	79.3
MS.gene030659.t1	AT2G25410	32.099	162	103	2	23	182	213	369	6.37e-17	79.0
MS.gene030659.t1	AT3G16720	39.326	89	51	2	109	197	90	175	8.56e-17	77.8
MS.gene030659.t1	AT5G27420	45.679	81	40	2	110	187	92	171	1.01e-16	78.2
MS.gene030659.t1	AT4G09120	46.053	76	39	1	112	185	93	168	1.10e-16	78.2
MS.gene030659.t1	AT1G35330	29.586	169	97	5	24	185	21	174	1.16e-16	77.8
MS.gene030659.t1	AT1G74410	38.462	91	55	1	95	185	132	221	2.59e-16	75.5
MS.gene030659.t1	AT4G10160	33.071	127	75	3	63	186	24	143	2.73e-16	75.5
MS.gene030659.t1	AT2G20030	47.143	70	36	1	113	182	98	166	3.21e-16	77.0
MS.gene030659.t1	AT1G23980	31.429	175	94	7	34	186	20	190	3.70e-16	76.6
MS.gene030659.t1	AT4G17905	66.667	45	15	0	138	182	179	223	3.99e-16	76.3
MS.gene030659.t1	AT4G17905	66.667	45	15	0	138	182	153	197	4.16e-16	76.3
MS.gene030659.t1	AT2G18650	43.590	78	44	0	109	186	95	172	4.91e-16	76.6
MS.gene030659.t1	AT4G15975	37.363	91	55	1	95	185	33	121	5.60e-16	74.7
MS.gene030659.t1	AT1G04360	29.545	132	83	2	61	182	45	176	6.26e-16	76.3
MS.gene030659.t1	AT3G03550	59.184	49	20	0	138	186	157	205	7.21e-16	75.9
MS.gene030659.t1	AT5G17600	43.056	72	40	1	111	182	114	184	7.84e-16	75.9
MS.gene030659.t1	AT4G30400	41.333	75	44	0	108	182	102	176	8.13e-16	76.3
MS.gene030659.t1	AT4G09130	44.000	75	40	1	110	182	88	162	1.23e-15	75.1
MS.gene030659.t1	AT1G32361	38.462	104	58	4	83	185	101	199	1.32e-15	74.7
MS.gene030659.t1	AT2G46494	29.927	137	90	3	52	182	222	358	1.97e-15	74.7
MS.gene030659.t1	AT2G46493	33.663	101	64	2	85	182	80	180	2.37e-15	72.0
MS.gene030659.t1	AT4G28890	43.662	71	39	1	113	183	97	166	2.39e-15	74.7
MS.gene030659.t1	AT2G42360	30.534	131	78	2	55	182	30	150	4.60e-15	72.0
MS.gene030659.t1	AT5G05810	43.056	72	40	1	111	182	118	188	4.91e-15	73.6
MS.gene030659.t1	AT3G62690	30.496	141	95	2	44	182	16	155	5.51e-15	72.4
MS.gene030659.t1	AT3G18930	37.069	116	56	5	113	217	120	229	6.19e-15	73.6
MS.gene030659.t1	AT3G18930	37.069	116	56	5	113	217	120	229	6.19e-15	73.6
MS.gene030659.t1	AT3G18930	37.069	116	56	5	113	217	120	229	6.19e-15	73.6
MS.gene030659.t1	AT4G09100	38.462	78	46	2	107	182	50	127	7.13e-15	69.3
MS.gene030659.t1	AT2G35420	42.857	77	41	2	106	182	72	145	1.36e-14	71.2
MS.gene030659.t1	AT5G42200	30.872	149	94	5	34	182	7	146	1.52e-14	69.3
MS.gene030659.t1	AT5G10380	39.241	79	47	1	108	186	104	181	1.63e-14	71.6
MS.gene030659.t1	AT1G72220	57.778	45	19	0	138	182	175	219	1.92e-14	72.0
MS.gene030659.t1	AT4G17920	30.303	132	85	2	61	185	24	155	2.03e-14	71.2
MS.gene030659.t1	AT5G66070	43.421	76	40	2	110	185	149	221	2.33e-14	70.1
MS.gene030659.t1	AT5G66070	43.421	76	40	2	110	185	149	221	2.33e-14	70.1
MS.gene030659.t1	AT1G33480	31.683	101	66	2	113	213	75	172	2.37e-14	70.5
MS.gene030659.t1	AT3G48030	32.090	134	75	3	68	185	41	174	2.76e-14	70.5
MS.gene030659.t1	AT2G34990	29.008	131	91	1	54	182	8	138	3.18e-14	70.9
MS.gene030659.t1	AT2G35910	39.474	76	45	1	113	188	121	195	3.45e-14	69.3
MS.gene030659.t1	AT2G34990	29.008	131	91	1	54	182	30	160	3.56e-14	70.9
MS.gene030659.t1	AT5G66070	43.421	76	40	2	110	185	173	245	3.90e-14	69.7
MS.gene030659.t1	AT3G48030	32.090	134	75	3	68	185	119	252	4.07e-14	70.9
MS.gene030659.t1	AT5G06490	34.314	102	51	2	113	208	96	187	4.50e-14	68.6
MS.gene030659.t1	AT4G33565	52.941	51	24	0	138	188	215	265	5.94e-14	70.5
MS.gene030659.t1	AT5G07040	26.866	134	85	3	52	183	15	137	8.16e-14	67.0
MS.gene030659.t1	AT5G58580	39.474	76	46	0	111	186	109	184	1.20e-13	69.3
MS.gene030659.t1	AT2G46495	40.789	76	43	1	109	182	287	362	1.46e-13	69.3
MS.gene030659.t1	AT2G46495	40.789	76	43	1	109	182	259	334	1.49e-13	69.3
MS.gene030659.t1	AT3G11110	29.530	149	99	2	34	182	7	149	1.62e-13	66.2
MS.gene030659.t1	AT5G53110	39.437	71	42	1	113	182	302	372	1.86e-13	68.9
MS.gene030659.t1	AT2G46160	36.145	83	46	1	113	188	104	186	2.42e-13	67.0
MS.gene030659.t1	AT2G46160	36.145	83	46	1	113	188	104	186	2.42e-13	67.0
MS.gene030659.t1	AT4G10150	34.940	83	52	1	104	186	77	157	2.74e-13	67.4
MS.gene030659.t1	AT5G36001	61.702	47	18	0	137	183	261	307	3.35e-13	68.2
MS.gene030659.t1	AT3G19140	39.437	71	41	1	113	183	54	122	3.99e-13	65.1
MS.gene030659.t1	AT5G43420	25.595	168	98	3	61	207	38	199	4.43e-13	67.8
MS.gene030659.t1	AT2G47560	29.333	150	97	3	36	182	7	150	5.36e-13	66.2
MS.gene030659.t1	AT5G40250	50.000	48	24	0	139	186	142	189	1.02e-12	67.0
MS.gene030659.t1	AT3G61550	30.357	112	61	2	87	188	80	184	1.13e-12	65.1
MS.gene030659.t1	AT2G42350	31.776	107	61	3	76	182	48	142	3.34e-12	63.9
MS.gene030659.t1	AT2G18670	33.333	75	50	0	108	182	78	152	3.55e-12	63.2
MS.gene030659.t1	AT2G34000	36.000	75	45	1	112	183	60	134	4.15e-12	62.4
MS.gene030659.t1	AT1G35630	37.755	98	59	2	116	212	209	305	4.19e-12	64.7
MS.gene030659.t1	AT4G35840	38.667	75	44	1	111	183	160	234	4.37e-12	63.9
MS.gene030659.t1	AT4G26400	44.118	68	30	2	115	182	223	282	4.48e-12	65.1
MS.gene030659.t1	AT4G26400	44.118	68	30	2	115	182	223	282	4.48e-12	65.1
MS.gene030659.t1	AT5G56340	39.506	81	41	2	102	182	228	300	6.18e-12	64.7
MS.gene030659.t1	AT2G17730	38.667	75	44	1	111	183	165	239	6.22e-12	63.5
MS.gene030659.t1	AT1G53010	28.249	177	75	4	54	188	12	178	1.72e-11	61.2
MS.gene030659.t1	AT3G20395	33.654	104	65	2	82	185	117	216	2.12e-11	62.0
MS.gene030659.t1	AT3G47990	59.091	44	17	1	139	182	234	276	4.74e-11	62.0
MS.gene030659.t1	AT3G47990	54.000	50	22	1	133	182	171	219	4.89e-11	61.6
MS.gene030659.t1	AT3G47990	54.000	50	22	1	133	182	171	219	4.89e-11	61.6
MS.gene030659.t1	AT3G47990	54.000	50	22	1	133	182	171	219	4.89e-11	61.6
MS.gene030659.t1	AT3G47990	54.000	50	22	1	133	182	212	260	5.06e-11	61.6
MS.gene030659.t1	AT2G03000	48.936	47	23	1	139	185	480	525	5.45e-11	62.0
MS.gene030659.t1	AT4G26580	36.709	79	44	2	112	185	256	333	5.75e-11	61.6
MS.gene030659.t1	AT4G26580	36.709	79	44	2	112	185	256	333	5.75e-11	61.6
MS.gene030659.t1	AT5G46650	30.000	170	89	7	35	185	2	160	6.90e-11	61.2

Find 42 sgRNAs with CRISPR-Local

Find 49 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
AATTCAACTAACTCATATTT+TGG	0.108921	4.3:+8697219	MS.gene030659:CDS
ATTGATGATCAATTGGATTT+TGG	0.218436	4.3:-8697161	None:intergenic
CGGTGCCAGAAACTATTATT+AGG	0.257137	4.3:+8697691	MS.gene030659:CDS
TGAGTTGAAACTACCAAGTT+TGG	0.317109	4.3:+8697470	MS.gene030659:CDS
TGAATCCTAATAATAGTTTC+TGG	0.344198	4.3:-8697696	None:intergenic
TGGAAACCATGATTGCATTT+AGG	0.379959	4.3:-8697552	None:intergenic
GAGACTTGTCGAAAGATTGT+TGG	0.388982	4.3:+8697642	MS.gene030659:CDS
TTGCATTAAACTTCATCATA+AGG	0.400685	4.3:+8697310	MS.gene030659:CDS
AGTTACATTCAAAAGCTTCA+TGG	0.410074	4.3:-8697728	None:intergenic
CAACAACAATCCACCTCAAT+TGG	0.419352	4.3:+8697389	MS.gene030659:CDS
ATGTTCGTTGCATCGACAAA+TGG	0.447158	4.3:+8697574	MS.gene030659:CDS
AAGGAGGCATTGTCTGCACT+TGG	0.450962	4.3:-8697619	None:intergenic
GTTGGTGATTGATGATCAAT+TGG	0.451468	4.3:-8697168	None:intergenic
TCAGTTGAATAACTTACTGT+TGG	0.468597	4.3:-8697450	None:intergenic
ATTCCTTTGTTGACCAATTG+AGG	0.479348	4.3:-8697402	None:intergenic
CAGTTGAATAACTTACTGTT+GGG	0.481542	4.3:-8697449	None:intergenic
AGCACCGCCTCCTATGTTGC+CGG	0.494818	4.3:+8697671	MS.gene030659:CDS
TTGTTGAATCTCACACAAGA+AGG	0.499335	4.3:+8697130	MS.gene030659:CDS
AGGAGGCATTGTCTGCACTT+GGG	0.509273	4.3:-8697618	None:intergenic
ATACACTCCGTATCCAAACT+TGG	0.518070	4.3:-8697483	None:intergenic
AATATGAGTTAGTTGAATTG+TGG	0.521333	4.3:-8697215	None:intergenic
GTTTCTGGCACCGGCAACAT+AGG	0.524339	4.3:-8697681	None:intergenic
CTAATAATAGTTTCTGGCAC+CGG	0.527248	4.3:-8697690	None:intergenic
GGAATTCACGAAAGGTGAAA+AGG	0.529132	4.3:+8697518	MS.gene030659:CDS
GGAGGCATTGTCTGCACTTG+GGG	0.530430	4.3:-8697617	None:intergenic
TTGTCGAAAGATTGTTGGAT+CGG	0.534154	4.3:+8697647	MS.gene030659:CDS
GAAACTACCAAGTTTGGATA+CGG	0.536515	4.3:+8697476	MS.gene030659:CDS
GTGAGAACAGGGGACGTTGT+TGG	0.562716	4.3:-8697186	None:intergenic
ATTTGTCGATGCAACGAACA+TGG	0.562919	4.3:-8697572	None:intergenic
TCTGGCACCGGCAACATAGG+AGG	0.567868	4.3:-8697678	None:intergenic
CCTTTGTTGACCAATTGAGG+TGG	0.571148	4.3:-8697399	None:intergenic
GGCACCGGCAACATAGGAGG+CGG	0.580709	4.3:-8697675	None:intergenic
ATGGAGAAGAGGTAAAGTAA+AGG	0.584415	4.3:-8697100	None:intergenic
GAGATTCAACAAGAAGCTCA+TGG	0.584576	4.3:-8697119	None:intergenic
ACAAGAAGCTCATGGAGAAG+AGG	0.587733	4.3:-8697111	None:intergenic
CAATCTTTCGACAAGTCTCA+AGG	0.597223	4.3:-8697638	None:intergenic
TCAAAAGCTTCATGGTCTAG+TGG	0.599238	4.3:-8697720	None:intergenic
CCACCTCAATTGGTCAACAA+AGG	0.601823	4.3:+8697399	MS.gene030659:CDS
GGAGTGTATTATATGCCTCT+CGG	0.606865	4.3:+8697497	MS.gene030659:CDS
TGCCTCTCGGAATTCACGAA+AGG	0.628377	4.3:+8697510	MS.gene030659:CDS
CACCTTTCGTGAATTCCGAG+AGG	0.634223	4.3:-8697512	None:intergenic
TCTTTCGACAAGTCTCAAGG+AGG	0.763633	4.3:-8697635	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	AGCTACATTTAAAAATCTTA+AGG	-	chr4.3:8697340-8697359	None:intergenic	20.0%
!!!	AATTCAACTAACTCATATTT+TGG	+	chr4.3:8697219-8697238	MS.gene030659:CDS	20.0%
!	AATATGAGTTAGTTGAATTG+TGG	-	chr4.3:8697218-8697237	None:intergenic	25.0%
!	TGAATCCTAATAATAGTTTC+TGG	-	chr4.3:8697699-8697718	None:intergenic	25.0%
!	TTGCATTAAACTTCATCATA+AGG	+	chr4.3:8697310-8697329	MS.gene030659:CDS	25.0%
!!	AAGCTTTTGAATGTAACTAT+AGG	+	chr4.3:8697733-8697752	MS.gene030659:CDS	25.0%
!!	AGCTTTTGAATGTAACTATA+GGG	+	chr4.3:8697734-8697753	MS.gene030659:CDS	25.0%
!!!	ATTGATGATCAATTGGATTT+TGG	-	chr4.3:8697164-8697183	None:intergenic	25.0%
	AGTTACATTCAAAAGCTTCA+TGG	-	chr4.3:8697731-8697750	None:intergenic	30.0%
	CAGTTGAATAACTTACTGTT+GGG	-	chr4.3:8697452-8697471	None:intergenic	30.0%
	TCAGTTGAATAACTTACTGT+TGG	-	chr4.3:8697453-8697472	None:intergenic	30.0%
!	ATTTTGCCTAAATGCAATCA+TGG	+	chr4.3:8697546-8697565	MS.gene030659:CDS	30.0%
	ATGGAGAAGAGGTAAAGTAA+AGG	-	chr4.3:8697103-8697122	None:intergenic	35.0%
	ATTCCTTTGTTGACCAATTG+AGG	-	chr4.3:8697405-8697424	None:intergenic	35.0%
	GAAACTACCAAGTTTGGATA+CGG	+	chr4.3:8697476-8697495	MS.gene030659:CDS	35.0%
	TGGAAACCATGATTGCATTT+AGG	-	chr4.3:8697555-8697574	None:intergenic	35.0%
	TTGTCGAAAGATTGTTGGAT+CGG	+	chr4.3:8697647-8697666	MS.gene030659:CDS	35.0%
	TTGTTGAATCTCACACAAGA+AGG	+	chr4.3:8697130-8697149	MS.gene030659:CDS	35.0%
!	TGAGTTGAAACTACCAAGTT+TGG	+	chr4.3:8697470-8697489	MS.gene030659:CDS	35.0%
!!	CTAATAATAGTTTCTGGCAC+CGG	-	chr4.3:8697693-8697712	None:intergenic	35.0%
!!	GTTGGTGATTGATGATCAAT+TGG	-	chr4.3:8697171-8697190	None:intergenic	35.0%
	ATACACTCCGTATCCAAACT+TGG	-	chr4.3:8697486-8697505	None:intergenic	40.0%
	ATTTGTCGATGCAACGAACA+TGG	-	chr4.3:8697575-8697594	None:intergenic	40.0%
	CAACAACAATCCACCTCAAT+TGG	+	chr4.3:8697389-8697408	MS.gene030659:CDS	40.0%
	CAATCTTTCGACAAGTCTCA+AGG	-	chr4.3:8697641-8697660	None:intergenic	40.0%
	GAGACTTGTCGAAAGATTGT+TGG	+	chr4.3:8697642-8697661	MS.gene030659:CDS	40.0%
	GAGATTCAACAAGAAGCTCA+TGG	-	chr4.3:8697122-8697141	None:intergenic	40.0%
	GGAATTCACGAAAGGTGAAA+AGG	+	chr4.3:8697518-8697537	MS.gene030659:CDS	40.0%
	GGAGTGTATTATATGCCTCT+CGG	+	chr4.3:8697497-8697516	MS.gene030659:CDS	40.0%
	TCAAAAGCTTCATGGTCTAG+TGG	-	chr4.3:8697723-8697742	None:intergenic	40.0%
!	ATGTTCGTTGCATCGACAAA+TGG	+	chr4.3:8697574-8697593	MS.gene030659:CDS	40.0%
!	CGGTGCCAGAAACTATTATT+AGG	+	chr4.3:8697691-8697710	MS.gene030659:CDS	40.0%
!!!	TGTGGTTTTGTGTGAGAACA+GGG	-	chr4.3:8697200-8697219	None:intergenic	40.0%
!!!	TTGTGGTTTTGTGTGAGAAC+AGG	-	chr4.3:8697201-8697220	None:intergenic	40.0%
	ACAAGAAGCTCATGGAGAAG+AGG	-	chr4.3:8697114-8697133	None:intergenic	45.0%
	CCACCTCAATTGGTCAACAA+AGG	+	chr4.3:8697399-8697418	MS.gene030659:CDS	45.0%
	CCTTTGTTGACCAATTGAGG+TGG	-	chr4.3:8697402-8697421	None:intergenic	45.0%
	TCTTTCGACAAGTCTCAAGG+AGG	-	chr4.3:8697638-8697657	None:intergenic	45.0%
!!!	GTGGTTTTGTGTGAGAACAG+GGG	-	chr4.3:8697199-8697218	None:intergenic	45.0%
	CACCTTTCGTGAATTCCGAG+AGG	-	chr4.3:8697515-8697534	None:intergenic	50.0%
	TGCCTCTCGGAATTCACGAA+AGG	+	chr4.3:8697510-8697529	MS.gene030659:CDS	50.0%
!!	AAGGAGGCATTGTCTGCACT+TGG	-	chr4.3:8697622-8697641	None:intergenic	50.0%
!!	AGGAGGCATTGTCTGCACTT+GGG	-	chr4.3:8697621-8697640	None:intergenic	50.0%
	GTGAGAACAGGGGACGTTGT+TGG	-	chr4.3:8697189-8697208	None:intergenic	55.0%
!!	GGAGGCATTGTCTGCACTTG+GGG	-	chr4.3:8697620-8697639	None:intergenic	55.0%
!!	GTTTCTGGCACCGGCAACAT+AGG	-	chr4.3:8697684-8697703	None:intergenic	55.0%
	AGCACCGCCTCCTATGTTGC+CGG	+	chr4.3:8697671-8697690	MS.gene030659:CDS	60.0%
!!	TCTGGCACCGGCAACATAGG+AGG	-	chr4.3:8697681-8697700	None:intergenic	60.0%
!!	GGCACCGGCAACATAGGAGG+CGG	-	chr4.3:8697678-8697697	None:intergenic	65.0%

Chromosome	Type	Strat	End	Strand	Name
chr4.3	gene	8697084	8697770	8697084	ID=MS.gene030659
chr4.3	mRNA	8697084	8697770	8697084	ID=MS.gene030659.t1;Parent=MS.gene030659
chr4.3	exon	8697084	8697770	8697084	ID=MS.gene030659.t1.exon1;Parent=MS.gene030659.t1
chr4.3	CDS	8697084	8697770	8697084	ID=cds.MS.gene030659.t1;Parent=MS.gene030659.t1

Gene Sequence

>MS.gene030659

ATGTATGCTTCTACTTCCTTTACTTTACCTCTTCTCCATGAGCTTCTTGTTGAATCTCACACAAGAAGGTTGCTCTTCCAAAATCCAATTGATCATCAATCACCAACAACGTCCCCTGTTCTCACACAAAACCACAATTCAACTAACTCATATTTTGGAATTCGTGTACTTGATGCAAATGTTGTGATGATACTTGCAGTTCTATTGTGTGCTCTTATTTGCTCTCTTGCATTAAACTTCATCATAAGGCGTGCCTTAAGATTTTTAAATGTAGCTCTCAACAACGACTCTTCTTCGAGTTCAAGCAACAACAATCCACCTCAATTGGTCAACAAAGGAATCAAGAAGAAAGCTCTCAAGACATTCCCAACAGTAAGTTATTCAACTGAGTTGAAACTACCAAGTTTGGATACGGAGTGTATTATATGCCTCTCGGAATTCACGAAAGGTGAAAAGGTGCGCATTTTGCCTAAATGCAATCATGGTTTCCATGTTCGTTGCATCGACAAATGGCTAAAAGCACATTCATCATGCCCCAAGTGCAGACAATGCCTCCTTGAGACTTGTCGAAAGATTGTTGGATCGGAAGCACCGCCTCCTATGTTGCCGGTGCCAGAAACTATTATTAGGATTCAGCCACTAGACCATGAAGCTTTTGAATGTAACTATAGGGAAGAAAGTAGATAA

Protein sequence

>MS.gene030659.t1

MYASTSFTLPLLHELLVESHTRRLLFQNPIDHQSPTTSPVLTQNHNSTNSYFGIRVLDANVVMILAVLLCALICSLALNFIIRRALRFLNVALNNDSSSSSSNNNPPQLVNKGIKKKALKTFPTVSYSTELKLPSLDTECIICLSEFTKGEKVRILPKCNHGFHVRCIDKWLKAHSSCPKCRQCLLETCRKIVGSEAPPPMLPVPETIIRIQPLDHEAFECNYREESR