AlfalfaGEDB | MS.gene58105

M. sativa cultivar XinJiangDaYe / MS.gene58105

KEGG: K19040
GO: -
PFAM: PF13639.9

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene58105.t1	XP_003630209.2	71	231	15	1	1	179	1	231	1.70E-71	278.9

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene58105.t1	Q6NML0	59.8	117	44	2	61	174	107	223	4.4e-36	152.5

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene58105.t1	G7LD46	71.0	231	15	1	1	179	1	231	1.2e-71	278.9

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR

PPI:

Gene1	Gene2	Type
MS.gene58105	MS.gene030657	PPI
MS.gene58105	MS.gene70255	PPI
MS.gene58105	MS.gene030659	PPI
MS.gene58108	MS.gene58105	PPI
MS.gene58105	MS.gene94889	PPI
MS.gene58105	MS.gene28429	PPI
MS.gene58105	MS.gene58106	PPI
MS.gene58105	MS.gene013346	PPI
MS.gene58105	MS.gene28425	PPI
MS.gene030658	MS.gene58105	PPI
MS.gene58105	MS.gene88015	PPI
MS.gene58105	MS.gene70250	PPI
MS.gene58105	MS.gene48772	PPI
MS.gene58105	MS.gene28424	PPI
MS.gene58105	MS.gene76770	PPI
MS.gene58109	MS.gene58105	PPI
MS.gene70256	MS.gene58105	PPI
MS.gene58105	MS.gene28430	PPI
MS.gene58105	MS.gene030651	PPI
MS.gene58105	MS.gene030655	PPI
MS.gene58105	MS.gene31002	PPI
MS.gene70253	MS.gene58105	PPI
MS.gene58105	MS.gene030652	PPI
MS.gene58105	MS.gene70254	PPI
MS.gene58105	MS.gene28428	PPI
MS.gene58105	MS.gene030660	PPI
MS.gene58105	MS.gene28427	PPI
MS.gene58105	MS.gene030654	PPI
MS.gene049319	MS.gene58105	PPI
MS.gene58105	MS.gene030653	PPI
MS.gene58105	MS.gene58107	PPI
MS.gene58111	MS.gene58105	PPI
MS.gene28426	MS.gene58105	PPI
MS.gene06444	MS.gene58105	PPI
MS.gene58105	MS.gene58110	PPI
MS.gene58105	MS.gene28431	PPI
MS.gene58105	MS.gene030656	PPI
MS.gene28429	MS.gene58105	PPI
MS.gene58105	MS.gene58104	PPI
MS.gene58105	MS.gene70257	PPI
MS.gene70249	MS.gene58105	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene58105.t1	MTR_8g092990	72.294	231	12	1	1	179	1	231	9.96e-93	270
MS.gene58105.t1	MTR_8g092970	65.487	226	18	2	1	175	1	217	1.09e-84	249
MS.gene58105.t1	MTR_8g092840	64.889	225	28	1	1	174	1	225	1.62e-84	249
MS.gene58105.t1	MTR_8g092930	64.602	226	28	2	1	175	1	225	9.73e-84	246
MS.gene58105.t1	MTR_8g093010	61.842	228	25	4	1	175	1	219	2.72e-83	245
MS.gene58105.t1	MTR_8g092960	63.761	218	32	2	1	174	1	215	2.19e-80	238
MS.gene58105.t1	MTR_8g092985	59.048	210	37	1	1	161	1	210	7.50e-77	228
MS.gene58105.t1	MTR_3g095560	51.724	232	56	3	1	178	1	230	3.09e-70	213
MS.gene58105.t1	MTR_3g094000	48.387	124	58	2	24	146	58	176	3.91e-32	114
MS.gene58105.t1	MTR_5g024730	46.552	116	54	4	49	156	63	178	8.21e-28	103
MS.gene58105.t1	MTR_7g073200	47.863	117	45	4	24	135	48	153	3.10e-27	101
MS.gene58105.t1	MTR_3g116000	49.505	101	44	3	48	143	61	159	7.84e-26	98.2
MS.gene58105.t1	MTR_8g073120	50.000	84	40	2	61	142	69	152	2.60e-24	94.7
MS.gene58105.t1	MTR_2g035800	54.930	71	31	1	62	132	76	145	1.02e-22	89.4
MS.gene58105.t1	MTR_4g094725	58.333	72	29	1	62	132	78	149	1.19e-22	89.0
MS.gene58105.t1	MTR_3g071300	36.111	144	72	4	25	161	42	172	3.93e-20	82.8
MS.gene58105.t1	MTR_8g023400	45.570	79	40	2	62	139	92	168	1.61e-19	84.0
MS.gene58105.t1	MTR_5g082940	48.000	75	38	1	61	134	74	148	5.68e-19	79.7
MS.gene58105.t1	MTR_4g120270	43.836	73	38	1	59	131	77	146	6.64e-19	81.6
MS.gene58105.t1	MTR_7g117540	59.259	54	22	0	84	137	96	149	1.67e-18	80.9
MS.gene58105.t1	MTR_1g100737	41.121	107	51	3	36	138	74	172	5.17e-18	77.8
MS.gene58105.t1	MTR_3g078450	35.652	115	71	2	37	150	51	163	7.21e-18	78.2
MS.gene58105.t1	MTR_7g113800	36.364	110	60	3	35	135	58	166	1.14e-17	79.3
MS.gene58105.t1	MTR_1g492830	37.079	89	56	0	48	136	47	135	1.19e-17	77.4
MS.gene58105.t1	MTR_7g116220	40.000	80	46	1	59	136	67	146	1.35e-17	76.3
MS.gene58105.t1	MTR_2g096350	60.417	48	19	0	84	131	130	177	1.45e-17	77.0
MS.gene58105.t1	MTR_1g043410	31.034	145	87	4	29	164	54	194	1.47e-17	78.6
MS.gene58105.t1	MTR_2g436100	43.836	73	40	1	59	131	90	161	1.69e-17	78.2
MS.gene58105.t1	MTR_3g110190	43.421	76	42	1	62	137	66	140	2.30e-17	78.6
MS.gene58105.t1	MTR_6g055030	45.205	73	38	1	61	131	96	168	4.27e-17	77.4
MS.gene58105.t1	MTR_3g464780	43.590	78	41	1	61	135	101	178	4.59e-17	76.6
MS.gene58105.t1	MTR_6g087150	49.296	71	35	1	62	132	93	162	4.78e-17	77.8
MS.gene58105.t1	MTR_7g076250	36.937	111	60	3	62	171	63	164	6.21e-17	75.1
MS.gene58105.t1	MTR_3g099650	41.558	77	43	1	61	135	106	182	6.91e-17	77.4
MS.gene58105.t1	MTR_4g056590	40.230	87	45	3	61	147	99	178	7.28e-17	74.7
MS.gene58105.t1	MTR_5g064980	37.374	99	57	2	38	134	87	182	1.08e-16	77.0
MS.gene58105.t1	MTR_5g030010	36.275	102	62	2	55	156	115	213	1.79e-16	76.3
MS.gene58105.t1	MTR_8g066780	27.041	196	115	4	4	177	51	240	2.57e-16	75.5
MS.gene58105.t1	MTR_5g071930	39.604	101	52	3	54	154	61	152	2.77e-16	73.2
MS.gene58105.t1	MTR_1g082550	40.506	79	41	2	61	135	97	173	3.09e-16	75.5
MS.gene58105.t1	MTR_4g129420	43.243	74	42	0	62	135	117	190	3.15e-16	75.9
MS.gene58105.t1	MTR_2g055790	35.537	121	68	2	21	135	30	146	3.31e-16	73.2
MS.gene58105.t1	MTR_4g030070	36.364	88	54	1	52	139	75	160	4.43e-16	73.6
MS.gene58105.t1	MTR_8g089880	37.500	80	49	1	62	141	127	205	5.65e-16	73.9
MS.gene58105.t1	MTR_3g114500	34.545	110	66	3	24	131	8	113	6.09e-16	70.9
MS.gene58105.t1	MTR_4g063070	43.662	71	39	1	62	131	308	378	6.45e-16	74.7
MS.gene58105.t1	MTR_3g078470	37.113	97	59	2	39	134	54	149	7.46e-16	72.8
MS.gene58105.t1	MTR_7g116180	40.000	75	43	1	62	134	67	141	7.59e-16	71.6
MS.gene58105.t1	MTR_5g064990	37.778	90	53	2	61	147	113	202	8.74e-16	74.3
MS.gene58105.t1	MTR_1g070425	40.000	75	43	1	62	134	68	142	1.09e-15	71.2
MS.gene58105.t1	MTR_4g108830	30.233	129	88	1	4	132	91	217	1.19e-15	72.0
MS.gene58105.t1	MTR_7g108855	36.957	92	49	2	63	145	67	158	1.36e-15	71.6
MS.gene58105.t1	MTR_4g093830	32.407	108	62	2	62	169	126	222	1.98e-15	73.2
MS.gene58105.t1	MTR_2g009310	60.000	45	18	0	87	131	159	203	3.03e-15	72.8
MS.gene58105.t1	MTR_5g064890	35.417	96	59	2	42	135	106	200	3.37e-15	72.4
MS.gene58105.t1	MTR_5g092790	40.789	76	44	1	57	131	152	227	4.20e-15	70.9
MS.gene58105.t1	MTR_8g028465	32.710	107	55	3	59	165	87	176	5.28e-15	70.1
MS.gene58105.t1	MTR_5g066250	41.429	70	40	1	62	131	134	202	5.29e-15	72.0
MS.gene58105.t1	MTR_8g099495	38.462	78	47	1	56	132	313	390	5.66e-15	72.0
MS.gene58105.t1	MTR_5g009190	38.750	80	48	1	53	131	257	336	6.26e-15	71.6
MS.gene58105.t1	MTR_1g074190	32.231	121	72	3	29	139	61	181	6.27e-15	71.6
MS.gene58105.t1	MTR_3g100400	41.429	70	40	1	62	131	130	198	6.28e-15	72.0
MS.gene58105.t1	MTR_4g108830	39.535	86	33	1	47	132	123	189	6.37e-15	69.7
MS.gene58105.t1	MTR_6g007680	43.662	71	39	1	61	131	39	108	7.37e-15	68.6
MS.gene58105.t1	MTR_5g009210	38.750	80	48	1	53	131	278	357	8.76e-15	71.2
MS.gene58105.t1	MTR_5g076990	39.796	98	56	1	37	131	51	148	9.19e-15	70.9
MS.gene58105.t1	MTR_7g079280	30.579	121	69	3	54	173	72	178	1.19e-14	68.6
MS.gene58105.t1	MTR_5g026730	44.615	65	32	2	71	131	72	136	1.24e-14	68.6
MS.gene58105.t1	MTR_3g091620	34.579	107	57	3	62	156	101	206	1.26e-14	70.9
MS.gene58105.t1	MTR_2g090905	44.286	70	27	1	88	157	70	127	1.53e-14	67.0
MS.gene58105.t1	MTR_3g086700	36.458	96	55	2	42	131	22	117	1.96e-14	68.2
MS.gene58105.t1	MTR_5g034790	41.096	73	42	1	62	134	116	187	2.17e-14	70.1
MS.gene58105.t1	MTR_5g026720	30.000	110	70	3	29	131	26	135	2.85e-14	67.0
MS.gene58105.t1	MTR_3g012550	36.364	77	48	1	56	131	74	150	2.90e-14	67.4
MS.gene58105.t1	MTR_7g079290	32.558	86	53	2	60	141	123	207	3.02e-14	68.2
MS.gene58105.t1	MTR_1g070140	36.842	76	48	0	56	131	97	172	3.68e-14	69.3
MS.gene58105.t1	MTR_8g074900	42.466	73	37	1	62	134	158	225	3.74e-14	68.2
MS.gene58105.t1	MTR_5g009200	38.961	77	46	1	56	131	316	392	4.29e-14	69.3
MS.gene58105.t1	MTR_2g041200	36.082	97	53	1	44	131	55	151	4.38e-14	67.0
MS.gene58105.t1	MTR_3g086730	38.750	80	47	1	57	134	41	120	6.12e-14	67.8
MS.gene58105.t1	MTR_8g032690	43.077	65	34	1	89	153	19	80	6.75e-14	65.1
MS.gene58105.t1	MTR_5g022920	40.000	75	44	1	61	134	160	234	6.90e-14	67.8
MS.gene58105.t1	MTR_8g063660	38.667	75	45	1	62	136	68	141	7.22e-14	68.6
MS.gene58105.t1	MTR_5g092750	42.466	73	41	1	60	131	155	227	8.17e-14	67.4
MS.gene58105.t1	MTR_2g090950	59.091	44	18	0	88	131	122	165	8.92e-14	67.4
MS.gene58105.t1	MTR_6g007670	43.478	69	37	1	63	131	9	75	9.88e-14	67.4
MS.gene58105.t1	MTR_6g007670	45.070	71	39	0	61	131	144	214	1.51e-13	67.0
MS.gene58105.t1	MTR_6g007737	40.000	75	40	2	62	134	133	204	9.97e-14	68.6
MS.gene58105.t1	MTR_1g056350	35.165	91	55	2	62	149	74	163	1.02e-13	65.9
MS.gene58105.t1	MTR_7g059360	47.368	57	30	0	76	132	145	201	1.04e-13	67.0
MS.gene58105.t1	MTR_3g087900	48.529	68	30	3	69	135	52	115	1.35e-13	65.5
MS.gene58105.t1	MTR_3g091200	39.437	71	42	1	62	131	303	373	2.16e-13	67.4
MS.gene58105.t1	MTR_4g106680	38.571	70	42	1	62	131	106	174	3.16e-13	66.6
MS.gene58105.t1	MTR_8g099515	42.254	71	40	1	62	131	309	379	3.93e-13	66.6
MS.gene58105.t1	MTR_1g026070	38.571	70	39	2	62	131	48	113	4.05e-13	63.5
MS.gene58105.t1	MTR_8g019710	60.000	45	18	0	87	131	52	96	5.99e-13	63.2
MS.gene58105.t1	MTR_8g072020	63.043	46	15	2	87	131	404	448	1.11e-12	65.5
MS.gene58105.t1	MTR_8g072020	63.043	46	15	2	87	131	443	487	1.21e-12	65.5
MS.gene58105.t1	MTR_8g071815	53.488	43	20	0	89	131	90	132	1.81e-12	62.8
MS.gene58105.t1	MTR_8g027745	35.897	78	49	1	55	131	279	356	3.88e-12	63.9
MS.gene58105.t1	MTR_7g116200	38.028	71	42	1	61	131	67	135	5.87e-12	61.2
MS.gene58105.t1	MTR_3g078120	29.167	120	73	1	24	131	8	127	6.19e-12	60.8
MS.gene58105.t1	MTR_8g066740	35.714	98	60	1	37	131	51	148	1.10e-11	62.4
MS.gene58105.t1	MTR_2g079320	33.333	96	52	1	39	134	121	204	1.11e-11	61.2
MS.gene58105.t1	MTR_3g081030	34.343	99	55	2	68	166	100	188	1.17e-11	61.2
MS.gene58105.t1	MTR_8g027980	33.333	75	48	1	65	137	93	167	1.42e-11	61.6
MS.gene58105.t1	MTR_4g022410	46.429	56	30	0	76	131	100	155	1.58e-11	60.5
MS.gene58105.t1	MTR_7g096690	31.250	80	50	2	56	131	64	142	1.69e-11	62.0
MS.gene58105.t1	MTR_6g055030	53.659	41	19	0	91	131	97	137	2.08e-11	61.2
MS.gene58105.t1	MTR_4g106960	54.000	50	22	1	82	131	171	219	2.11e-11	61.6
MS.gene58105.t1	MTR_4g106960	54.000	50	22	1	82	131	171	219	2.23e-11	61.6
MS.gene58105.t1	MTR_4g106960	54.000	50	22	1	82	131	228	276	2.45e-11	61.6
MS.gene58105.t1	MTR_4g106960	54.000	50	22	1	82	131	228	276	2.75e-11	61.2
MS.gene58105.t1	MTR_3g078540	41.270	63	36	1	76	137	66	128	3.17e-11	58.9
MS.gene58105.t1	MTR_3g078520	30.337	89	62	0	43	131	57	145	3.64e-11	58.9
MS.gene58105.t1	MTR_8g009190	47.917	48	25	0	88	135	104	151	5.15e-11	60.5
MS.gene58105.t1	MTR_2g044570	40.741	54	32	0	88	141	82	135	6.14e-11	60.1
MS.gene58105.t1	MTR_7g116210	51.163	43	21	0	89	131	35	77	6.30e-11	57.4
MS.gene58105.t1	MTR_5g041310	56.818	44	18	1	88	131	114	156	6.87e-11	59.3
MS.gene58105.t1	MTR_1g096780	36.111	72	44	2	62	132	208	278	7.67e-11	60.1
MS.gene58105.t1	MTR_1g090480	34.314	102	56	2	47	137	49	150	9.01e-11	58.2
MS.gene58105.t1	MTR_7g117350	33.333	75	45	1	62	131	290	364	9.18e-11	59.7
MS.gene58105.t1	MTR_5g041330	56.818	44	18	1	88	131	104	146	9.54e-11	58.9

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene58105.t1	AT1G49230	54.545	154	62	2	24	173	70	219	1.65e-49	159
MS.gene58105.t1	AT1G49220	54.730	148	52	4	25	164	73	213	1.53e-47	155
MS.gene58105.t1	AT1G49200	50.633	158	63	4	25	174	74	224	5.81e-46	150
MS.gene58105.t1	AT1G49210	58.974	117	45	1	61	174	107	223	6.37e-46	150
MS.gene58105.t1	AT3G18773	49.032	155	73	3	24	174	66	218	2.61e-43	144
MS.gene58105.t1	AT5G05280	50.000	122	54	2	24	145	55	169	2.09e-33	117
MS.gene58105.t1	AT3G10910	49.565	115	54	3	24	135	47	160	3.41e-30	109
MS.gene58105.t1	AT1G20823	38.312	154	66	3	11	135	4	157	1.22e-26	100
MS.gene58105.t1	AT5G01880	43.697	119	55	5	28	145	52	159	1.48e-26	99.4
MS.gene58105.t1	AT1G76410	47.872	94	47	1	46	137	59	152	2.87e-26	99.4
MS.gene58105.t1	AT5G47610	58.333	60	25	0	72	131	90	149	6.15e-22	87.4
MS.gene58105.t1	AT2G17450	47.500	80	36	1	61	134	68	147	2.87e-21	86.3
MS.gene58105.t1	AT4G35480	45.361	97	38	3	61	142	71	167	3.24e-20	84.0
MS.gene58105.t1	AT4G17245	59.016	61	24	1	72	131	85	145	1.64e-19	81.3
MS.gene58105.t1	AT4G40070	37.736	106	63	2	62	164	95	200	6.31e-19	82.4
MS.gene58105.t1	AT1G74410	39.560	91	54	1	44	134	132	221	5.06e-18	78.6
MS.gene58105.t1	AT1G72310	64.583	48	17	0	88	135	126	173	5.50e-18	80.1
MS.gene58105.t1	AT3G14320	47.887	71	35	1	62	132	63	131	5.98e-18	77.8
MS.gene58105.t1	AT1G53820	50.000	62	30	1	88	148	119	180	2.06e-17	78.2
MS.gene58105.t1	AT5G57750	42.857	70	40	0	63	132	96	165	3.15e-17	76.3
MS.gene58105.t1	AT3G05200	42.222	90	48	2	61	148	98	185	3.15e-17	78.6
MS.gene58105.t1	AT3G16720	41.975	81	44	2	61	141	93	170	3.95e-17	77.4
MS.gene58105.t1	AT2G35000	40.741	81	46	1	57	135	101	181	4.03e-17	78.2
MS.gene58105.t1	AT1G28040	32.800	125	81	2	10	131	171	295	4.12e-17	77.4
MS.gene58105.t1	AT1G72200	38.462	104	45	3	61	161	114	201	9.10e-17	77.0
MS.gene58105.t1	AT4G17905	66.667	45	15	0	87	131	153	197	1.14e-16	76.3
MS.gene58105.t1	AT4G17905	66.667	45	15	0	87	131	179	223	1.15e-16	76.6
MS.gene58105.t1	AT2G20030	45.714	70	37	1	62	131	98	166	1.25e-16	76.6
MS.gene58105.t1	AT3G03550	59.184	49	20	0	87	135	157	205	1.64e-16	76.3
MS.gene58105.t1	AT4G15975	37.363	91	55	1	44	134	33	121	1.69e-16	74.7
MS.gene58105.t1	AT4G09120	44.737	76	40	1	61	134	93	168	1.93e-16	75.9
MS.gene58105.t1	AT1G22500	36.029	136	80	3	3	135	33	164	2.38e-16	75.9
MS.gene58105.t1	AT2G27940	35.789	95	59	1	48	142	101	193	2.74e-16	74.3
MS.gene58105.t1	AT5G17600	43.662	71	39	1	61	131	115	184	3.52e-16	75.5
MS.gene58105.t1	AT5G27420	36.893	103	48	3	59	158	92	180	3.78e-16	75.1
MS.gene58105.t1	AT4G09100	39.759	83	44	3	51	131	49	127	3.92e-16	71.6
MS.gene58105.t1	AT4G09110	43.836	73	39	1	61	131	93	165	4.51e-16	74.3
MS.gene58105.t1	AT2G18650	43.243	74	42	0	62	135	99	172	4.56e-16	75.1
MS.gene58105.t1	AT3G62690	36.538	104	54	3	63	164	88	181	6.97e-16	73.6
MS.gene58105.t1	AT4G30400	41.429	70	41	0	62	131	107	176	7.01e-16	74.7
MS.gene58105.t1	AT1G35330	42.105	76	42	1	61	134	99	174	7.97e-16	73.9
MS.gene58105.t1	AT5G42200	42.254	71	40	1	61	131	77	146	8.03e-16	71.2
MS.gene58105.t1	AT4G28890	41.096	73	42	1	60	132	95	166	1.12e-15	74.3
MS.gene58105.t1	AT1G32361	34.043	141	82	5	32	171	101	231	1.40e-15	73.6
MS.gene58105.t1	AT4G09130	42.667	75	41	1	59	131	88	162	3.31e-15	72.4
MS.gene58105.t1	AT2G46493	34.653	101	63	2	34	131	80	180	3.67e-15	70.1
MS.gene58105.t1	AT3G61550	28.966	145	76	4	36	170	80	207	4.11e-15	70.5
MS.gene58105.t1	AT5G66070	43.243	74	39	2	61	134	151	221	4.26e-15	70.9
MS.gene58105.t1	AT5G66070	43.243	74	39	2	61	134	151	221	4.26e-15	70.9
MS.gene58105.t1	AT2G46494	41.333	75	43	1	58	131	284	358	4.64e-15	72.0
MS.gene58105.t1	AT1G72220	46.970	66	31	1	87	148	175	240	5.29e-15	72.0
MS.gene58105.t1	AT2G46160	32.075	106	59	2	59	157	101	200	5.55e-15	70.1
MS.gene58105.t1	AT2G46160	32.075	106	59	2	59	157	101	200	5.55e-15	70.1
MS.gene58105.t1	AT5G06490	32.692	104	54	2	60	157	94	187	5.78e-15	70.1
MS.gene58105.t1	AT5G66070	33.871	124	71	4	19	134	125	245	6.75e-15	70.5
MS.gene58105.t1	AT2G17730	41.892	74	41	1	61	132	166	239	7.94e-15	70.5
MS.gene58105.t1	AT3G48030	38.356	73	45	0	62	134	102	174	1.16e-14	70.1
MS.gene58105.t1	AT5G05810	41.429	70	40	1	62	131	120	188	1.24e-14	71.2
MS.gene58105.t1	AT1G04360	36.559	93	48	2	50	131	84	176	1.28e-14	70.9
MS.gene58105.t1	AT3G48030	38.356	73	45	0	62	134	180	252	1.60e-14	70.5
MS.gene58105.t1	AT4G33565	43.662	71	38	1	87	155	215	285	1.66e-14	70.5
MS.gene58105.t1	AT5G10380	37.975	79	48	1	57	135	104	181	1.88e-14	70.1
MS.gene58105.t1	AT4G35840	41.892	74	41	1	61	132	161	234	1.99e-14	69.3
MS.gene58105.t1	AT2G34990	32.673	101	60	3	59	157	86	180	2.04e-14	70.1
MS.gene58105.t1	AT2G25410	42.529	87	47	2	48	131	283	369	2.17e-14	70.5
MS.gene58105.t1	AT2G34990	32.673	101	60	3	59	157	64	158	2.18e-14	69.7
MS.gene58105.t1	AT5G53110	37.333	75	46	1	58	131	298	372	5.02e-14	69.3
MS.gene58105.t1	AT2G47560	43.056	72	40	1	61	131	79	150	5.48e-14	67.8
MS.gene58105.t1	AT2G18670	37.143	70	44	0	62	131	83	152	6.05e-14	67.0
MS.gene58105.t1	AT5G58580	33.636	110	55	2	61	167	110	204	6.16e-14	68.6
MS.gene58105.t1	AT2G35420	35.238	105	62	4	62	166	77	175	6.57e-14	68.2
MS.gene58105.t1	AT3G18930	49.020	51	26	0	88	138	155	205	6.63e-14	68.9
MS.gene58105.t1	AT3G18930	49.020	51	26	0	88	138	155	205	6.63e-14	68.9
MS.gene58105.t1	AT3G18930	49.020	51	26	0	88	138	155	205	6.63e-14	68.9
MS.gene58105.t1	AT4G10160	33.636	110	63	3	29	135	41	143	8.12e-14	67.4
MS.gene58105.t1	AT2G35910	35.227	88	56	1	62	149	121	207	8.46e-14	67.0
MS.gene58105.t1	AT5G36001	63.043	46	17	0	86	131	261	306	1.04e-13	68.2
MS.gene58105.t1	AT2G42360	32.727	110	61	2	25	131	51	150	1.06e-13	67.0
MS.gene58105.t1	AT1G23980	37.838	74	45	1	62	135	118	190	1.26e-13	68.2
MS.gene58105.t1	AT3G19140	42.105	76	40	2	59	132	49	122	1.54e-13	64.7
MS.gene58105.t1	AT2G34000	37.333	75	44	1	61	132	60	134	1.80e-13	65.1
MS.gene58105.t1	AT5G40250	50.000	48	24	0	88	135	142	189	2.08e-13	67.4
MS.gene58105.t1	AT2G46495	40.789	76	43	1	58	131	259	334	4.03e-13	66.6
MS.gene58105.t1	AT2G46495	40.789	76	43	1	58	131	287	362	4.09e-13	66.6
MS.gene58105.t1	AT5G43420	32.584	89	47	1	56	131	92	180	5.50e-13	66.2
MS.gene58105.t1	AT5G07040	33.750	80	52	1	54	132	58	137	6.08e-13	63.5
MS.gene58105.t1	AT4G10150	35.135	74	46	1	62	135	86	157	7.93e-13	64.7
MS.gene58105.t1	AT4G17920	40.244	82	45	2	55	134	76	155	1.07e-12	65.1
MS.gene58105.t1	AT1G33480	28.713	101	69	2	62	162	75	172	1.26e-12	64.7
MS.gene58105.t1	AT2G42350	30.841	107	62	3	25	131	48	142	1.50e-12	63.9
MS.gene58105.t1	AT1G35630	36.735	98	60	2	65	161	209	305	2.18e-12	64.3
MS.gene58105.t1	AT3G11110	40.000	70	42	0	62	131	80	149	2.93e-12	62.0
MS.gene58105.t1	AT2G37580	34.483	87	51	2	45	131	104	184	4.94e-12	62.8
MS.gene58105.t1	AT4G11360	35.227	88	53	2	50	135	48	133	6.09e-12	60.8
MS.gene58105.t1	AT4G26400	42.647	68	31	2	64	131	223	282	6.54e-12	63.2
MS.gene58105.t1	AT4G26400	42.647	68	31	2	64	131	223	282	6.54e-12	63.2
MS.gene58105.t1	AT4G30370	36.620	71	44	1	62	132	89	158	6.59e-12	61.2
MS.gene58105.t1	AT1G53010	50.000	50	25	0	88	137	129	178	6.67e-12	61.2
MS.gene58105.t1	AT5G56340	38.272	81	42	2	51	131	228	300	8.10e-12	63.2
MS.gene58105.t1	AT3G20395	33.654	104	65	2	31	134	117	216	2.11e-11	60.8
MS.gene58105.t1	AT3G47990	54.000	50	22	1	82	131	171	219	2.90e-11	61.2
MS.gene58105.t1	AT3G47990	54.000	50	22	1	82	131	171	219	2.90e-11	61.2
MS.gene58105.t1	AT3G47990	54.000	50	22	1	82	131	171	219	2.90e-11	61.2
MS.gene58105.t1	AT3G47990	54.000	50	22	1	82	131	228	276	2.93e-11	61.2
MS.gene58105.t1	AT3G47990	54.000	50	22	1	82	131	212	260	3.07e-11	61.2
MS.gene58105.t1	AT2G03000	52.273	44	20	1	88	131	480	522	3.41e-11	61.2
MS.gene58105.t1	AT4G26580	36.709	79	44	2	61	134	256	333	3.41e-11	61.2
MS.gene58105.t1	AT4G26580	36.709	79	44	2	61	134	256	333	3.41e-11	61.2
MS.gene58105.t1	AT5G52150	32.203	118	69	3	17	124	82	198	3.94e-11	59.7
MS.gene58105.t1	AT3G61180	31.034	116	70	2	31	146	274	379	6.76e-11	60.5
MS.gene58105.t1	AT4G24015	33.721	86	55	1	46	131	64	147	6.87e-11	58.5
MS.gene58105.t1	AT3G60966	55.814	43	19	0	89	131	62	104	8.23e-11	57.8

Find 34 sgRNAs with CRISPR-Local

Find 42 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TCTGGCACTGGTAACAAAAT+TGG	0.215829	4.2:-9457921	None:intergenic
TGGATTGCTATAATAATTTC+TGG	0.238268	4.2:-9457939	None:intergenic
CGAGTTGAATCTACCAAGTT+TGG	0.287389	4.2:+9457713	MS.gene58105:CDS
CTTGAAACTTGTCGAAAGAT+TGG	0.318725	4.2:+9457882	MS.gene58105:CDS
TGAAATCCATGGTTGCATTT+AGG	0.344720	4.2:-9457795	None:intergenic
ACCACTTGAGCACGAAGCTT+TGG	0.379749	4.2:+9457962	MS.gene58105:CDS
TTGCATTAAACTTCATCATA+AGG	0.411192	4.2:+9457553	MS.gene58105:CDS
CAACAACAATCCACCTCAAT+TGG	0.419352	4.2:+9457632	MS.gene58105:CDS
ATGTTCGTTGCATTGACAAA+TGG	0.437642	4.2:+9457817	MS.gene58105:CDS
GCTATAATAATTTCTGGCAC+TGG	0.465203	4.2:-9457933	None:intergenic
TCGGTGGAATAGCTCATTGT+AGG	0.466374	4.2:-9457693	None:intergenic
AGAATTCACAAAGGGTGAAA+AGG	0.489010	4.2:+9457761	MS.gene58105:CDS
TTGCATTGACAAATGGCTAA+AGG	0.492896	4.2:+9457824	MS.gene58105:CDS
AAGCTTCGTGCTCAAGTGGT+TGG	0.506524	4.2:-9457959	None:intergenic
TTGTAGAATCTCACACAAGA+AGG	0.511006	4.2:+9457369	MS.gene58105:CDS
TCCAAAGCTTCGTGCTCAAG+TGG	0.522894	4.2:-9457963	None:intergenic
ATGGAGAAGTGGTGAAGTAA+AGG	0.523047	4.2:-9457339	None:intergenic
TCGAAAGATTGGTGGGTCGC+AGG	0.526432	4.2:+9457893	MS.gene58105:CDS
ATTCCTTTGATGACCAATTG+AGG	0.528975	4.2:-9457645	None:intergenic
CCACCTCAATTGGTCATCAA+AGG	0.529321	4.2:+9457642	MS.gene58105:CDS
AGAAGACATTGTCTACACTT+AGG	0.531664	4.2:-9457861	None:intergenic
ACACACTCTGTATCCAAACT+TGG	0.542352	4.2:-9457726	None:intergenic
GAAACTTGTCGAAAGATTGG+TGG	0.551880	4.2:+9457885	MS.gene58105:CDS
TATGATGAAGTTTAATGCAA+GGG	0.555043	4.2:-9457550	None:intergenic
TTATGATGAAGTTTAATGCA+AGG	0.569193	4.2:-9457551	None:intergenic
CCTTTGATGACCAATTGAGG+TGG	0.578584	4.2:-9457642	None:intergenic
AAACTTGTCGAAAGATTGGT+GGG	0.592454	4.2:+9457886	MS.gene58105:CDS
GAGATTCTACAAGAAGCTCA+TGG	0.595637	4.2:-9457358	None:intergenic
TGTCTCTCAGAATTCACAAA+GGG	0.596365	4.2:+9457753	MS.gene58105:CDS
ACAAGAAGCTCATGGAGAAG+TGG	0.602538	4.2:-9457350	None:intergenic
CAAACTTGGTAGATTCAACT+CGG	0.621643	4.2:-9457712	None:intergenic
TGCAACGAACATGAAATCCA+TGG	0.629921	4.2:-9457806	None:intergenic
ATGTCTCTCAGAATTCACAA+AGG	0.686490	4.2:+9457752	MS.gene58105:CDS
ACTTGGTAGATTCAACTCGG+TGG	0.705125	4.2:-9457709	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	AGCTACATTTAAAAATCTTA+AGG	-	chr4.2:9457583-9457602	None:intergenic	20.0%
!!!	ATTGATGTTCAATTGAATTT+TGG	-	chr4.2:9457403-9457422	None:intergenic	20.0%
!	TATGATGAAGTTTAATGCAA+GGG	-	chr4.2:9457553-9457572	None:intergenic	25.0%
!	TGGATTGCTATAATAATTTC+TGG	-	chr4.2:9457942-9457961	None:intergenic	25.0%
!	TTATGATGAAGTTTAATGCA+AGG	-	chr4.2:9457554-9457573	None:intergenic	25.0%
!	TTGCATTAAACTTCATCATA+AGG	+	chr4.2:9457553-9457572	MS.gene58105:CDS	25.0%
!	TTTGGCTATTTGTGAAAATA+CGG	-	chr4.2:9457442-9457461	None:intergenic	25.0%
!!	AATTCAACCAACTCATATTT+TGG	+	chr4.2:9457461-9457480	MS.gene58105:intron	25.0%
!!!	AATATGAGTTGGTTGAATTT+TGG	-	chr4.2:9457460-9457479	None:intergenic	25.0%
	TTGGCTATTTGTGAAAATAC+GGG	-	chr4.2:9457441-9457460	None:intergenic	30.0%
	AAACTTGTCGAAAGATTGGT+GGG	+	chr4.2:9457886-9457905	MS.gene58105:CDS	35.0%
	AGAAGACATTGTCTACACTT+AGG	-	chr4.2:9457864-9457883	None:intergenic	35.0%
	AGAATTCACAAAGGGTGAAA+AGG	+	chr4.2:9457761-9457780	MS.gene58105:CDS	35.0%
	ATGTCTCTCAGAATTCACAA+AGG	+	chr4.2:9457752-9457771	MS.gene58105:CDS	35.0%
	CAAACTTGGTAGATTCAACT+CGG	-	chr4.2:9457715-9457734	None:intergenic	35.0%
	CTTGAAACTTGTCGAAAGAT+TGG	+	chr4.2:9457882-9457901	MS.gene58105:CDS	35.0%
	TGAAATCCATGGTTGCATTT+AGG	-	chr4.2:9457798-9457817	None:intergenic	35.0%
	TGTCTCTCAGAATTCACAAA+GGG	+	chr4.2:9457753-9457772	MS.gene58105:CDS	35.0%
	TTGTAGAATCTCACACAAGA+AGG	+	chr4.2:9457369-9457388	MS.gene58105:CDS	35.0%
!	ATGTTCGTTGCATTGACAAA+TGG	+	chr4.2:9457817-9457836	MS.gene58105:CDS	35.0%
!	ATTCCTTTGATGACCAATTG+AGG	-	chr4.2:9457648-9457667	None:intergenic	35.0%
!	ATTTTGCCTAAATGCAACCA+TGG	+	chr4.2:9457789-9457808	MS.gene58105:CDS	35.0%
!	TTGCATTGACAAATGGCTAA+AGG	+	chr4.2:9457824-9457843	MS.gene58105:CDS	35.0%
!!	GCTATAATAATTTCTGGCAC+TGG	-	chr4.2:9457936-9457955	None:intergenic	35.0%
	ACACACTCTGTATCCAAACT+TGG	-	chr4.2:9457729-9457748	None:intergenic	40.0%
	ACGAGCTCCAAAATATGAGT+TGG	-	chr4.2:9457471-9457490	None:intergenic	40.0%
	ATGGAGAAGTGGTGAAGTAA+AGG	-	chr4.2:9457342-9457361	None:intergenic	40.0%
	CAACAACAATCCACCTCAAT+TGG	+	chr4.2:9457632-9457651	MS.gene58105:CDS	40.0%
	GAAACTTGTCGAAAGATTGG+TGG	+	chr4.2:9457885-9457904	MS.gene58105:CDS	40.0%
	GAGATTCTACAAGAAGCTCA+TGG	-	chr4.2:9457361-9457380	None:intergenic	40.0%
	TGCAACGAACATGAAATCCA+TGG	-	chr4.2:9457809-9457828	None:intergenic	40.0%
!	CGAGTTGAATCTACCAAGTT+TGG	+	chr4.2:9457713-9457732	MS.gene58105:CDS	40.0%
!!	TCTGGCACTGGTAACAAAAT+TGG	-	chr4.2:9457924-9457943	None:intergenic	40.0%
	ACAAGAAGCTCATGGAGAAG+TGG	-	chr4.2:9457353-9457372	None:intergenic	45.0%
	ACTTGGTAGATTCAACTCGG+TGG	-	chr4.2:9457712-9457731	None:intergenic	45.0%
	CCACCTCAATTGGTCATCAA+AGG	+	chr4.2:9457642-9457661	MS.gene58105:CDS	45.0%
	TCGGTGGAATAGCTCATTGT+AGG	-	chr4.2:9457696-9457715	None:intergenic	45.0%
!	CCTTTGATGACCAATTGAGG+TGG	-	chr4.2:9457645-9457664	None:intergenic	45.0%
	AAGCTTCGTGCTCAAGTGGT+TGG	-	chr4.2:9457962-9457981	None:intergenic	50.0%
	ACCACTTGAGCACGAAGCTT+TGG	+	chr4.2:9457962-9457981	MS.gene58105:CDS	50.0%
	TCCAAAGCTTCGTGCTCAAG+TGG	-	chr4.2:9457966-9457985	None:intergenic	50.0%
!	TCGAAAGATTGGTGGGTCGC+AGG	+	chr4.2:9457893-9457912	MS.gene58105:CDS	55.0%

Chromosome	Type	Strat	End	Strand	Name
chr4.2	gene	9457323	9458019	9457323	ID=MS.gene58105
chr4.2	mRNA	9457323	9458019	9457323	ID=MS.gene58105.t1;Parent=MS.gene58105
chr4.2	exon	9457323	9457390	9457323	ID=MS.gene58105.t1.exon1;Parent=MS.gene58105.t1
chr4.2	CDS	9457323	9457390	9457323	ID=cds.MS.gene58105.t1;Parent=MS.gene58105.t1
chr4.2	exon	9457548	9458019	9457548	ID=MS.gene58105.t1.exon2;Parent=MS.gene58105.t1
chr4.2	CDS	9457548	9458019	9457548	ID=cds.MS.gene58105.t1;Parent=MS.gene58105.t1

Gene Sequence

>MS.gene58105

ATGTATACTTCTACTTCCTTTACTTCACCACTTCTCCATGAGCTTCTTGTAGAATCTCACACAAGAAGGTTACTCTTCCAAAATTCAATTGAACATCAATCACTTAAAATCAACTCCCGTATTTTCACAAATAGCCAAAATTCAACCAACTCATATTTTGGAGCTCGTGAATTTGATTCAAATGTTGTGATGATACTTGCAGTTCTATTATGTGCTTTTATTTAGTTCCCTTGCATTAAACTTCATCATAAGGCGTGCCTTAAGATTTTTAAATGTAGCTCTCAACAACGACTCTTCTTCGAGTTCAAGCAACAACAATCCACCTCAATTGGTCATCAAAGGAATCAAGAAGAAAGCTCTCAAGAAATTTCCTACAATGAGCTATTCCACCGAGTTGAATCTACCAAGTTTGGATACAGAGTGTGTGATATGTCTCTCAGAATTCACAAAGGGTGAAAAGGTGCGCATTTTGCCTAAATGCAACCATGGATTTCATGTTCGTTGCATTGACAAATGGCTAAAGGAACACTCATCATGTCCTAAGTGTAGACAATGTCTTCTTGAAACTTGTCGAAAGATTGGTGGGTCGCAGGTGCAACCAATTTTGTTACCAGTGCCAGAAATTATTATAGCAATCCAACCACTTGAGCACGAAGCTTTGGAACGAAACTATAGAGAAATACAAGCTAACAATTAA

Protein sequence

>MS.gene58105.t1

MYTSTSFTSPLLHELLVESHTRSSLALNFIIRRALRFLNVALNNDSSSSSSNNNPPQLVIKGIKKKALKKFPTMSYSTELNLPSLDTECVICLSEFTKGEKVRILPKCNHGFHVRCIDKWLKEHSSCPKCRQCLLETCRKIGGSQVQPILLPVPEIIIAIQPLEHEALERNYREIQANN