AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene70255

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene70255.t1 MTR_8g092930 90.210 143 14 0 23 165 83 225 1.42e-81 240
MS.gene70255.t1 MTR_8g092970 86.014 143 12 1 23 165 83 217 4.81e-80 236
MS.gene70255.t1 MTR_8g093010 81.119 143 19 2 23 165 85 219 1.30e-79 235
MS.gene70255.t1 MTR_8g092960 60.829 217 30 3 1 164 1 215 3.62e-78 231
MS.gene70255.t1 MTR_8g092840 83.916 143 22 1 23 164 83 225 2.80e-76 227
MS.gene70255.t1 MTR_8g092990 85.417 144 20 1 23 165 84 227 8.94e-71 213
MS.gene70255.t1 MTR_8g092985 81.022 137 24 1 15 151 76 210 4.68e-70 211
MS.gene70255.t1 MTR_3g095560 67.568 148 42 2 23 165 81 227 8.77e-69 208
MS.gene70255.t1 MTR_3g094000 46.957 115 56 2 23 136 66 176 6.76e-29 105
MS.gene70255.t1 MTR_5g024730 46.957 115 54 3 38 145 63 177 1.53e-28 105
MS.gene70255.t1 MTR_3g116000 52.475 101 41 3 38 133 61 159 1.36e-27 102
MS.gene70255.t1 MTR_8g073120 47.423 97 45 3 40 132 58 152 4.96e-27 101
MS.gene70255.t1 MTR_7g073200 50.476 105 43 4 23 125 56 153 1.33e-25 96.7
MS.gene70255.t1 MTR_4g094725 54.430 79 35 1 45 122 71 149 5.06e-24 92.0
MS.gene70255.t1 MTR_2g035800 53.425 73 33 1 50 122 74 145 2.64e-23 90.5
MS.gene70255.t1 MTR_3g110190 45.679 81 43 1 47 127 61 140 1.41e-20 86.7
MS.gene70255.t1 MTR_1g100737 46.988 83 40 1 50 128 90 172 2.09e-20 83.6
MS.gene70255.t1 MTR_6g055030 43.158 95 51 2 38 129 83 177 1.12e-19 84.0
MS.gene70255.t1 MTR_8g023400 45.570 79 40 2 52 129 92 168 1.54e-19 83.6
MS.gene70255.t1 MTR_4g120270 44.737 76 35 2 48 121 76 146 1.89e-19 82.8
MS.gene70255.t1 MTR_3g078450 35.965 114 70 2 28 140 52 163 5.63e-19 80.5
MS.gene70255.t1 MTR_3g078470 38.776 98 59 1 28 124 52 149 9.32e-19 80.1
MS.gene70255.t1 MTR_3g099650 43.590 78 42 1 50 125 105 182 1.23e-18 81.6
MS.gene70255.t1 MTR_7g117540 45.333 75 39 1 53 127 77 149 1.38e-18 80.9
MS.gene70255.t1 MTR_1g043410 33.846 130 77 3 27 154 72 194 1.51e-18 80.9
MS.gene70255.t1 MTR_6g087150 50.704 71 34 1 52 122 93 162 3.42e-18 80.5
MS.gene70255.t1 MTR_7g076250 34.646 127 73 3 36 161 47 164 3.49e-18 77.8
MS.gene70255.t1 MTR_4g056590 40.000 90 47 3 48 137 96 178 3.78e-18 77.8
MS.gene70255.t1 MTR_7g116220 35.455 110 59 3 49 146 67 176 4.30e-18 77.4
MS.gene70255.t1 MTR_5g082940 44.872 78 42 1 48 124 71 148 4.34e-18 77.0
MS.gene70255.t1 MTR_5g071930 45.745 94 45 3 51 144 65 152 4.91e-18 77.4
MS.gene70255.t1 MTR_5g064990 30.519 154 100 4 11 159 75 226 5.66e-18 80.1
MS.gene70255.t1 MTR_1g082550 34.711 121 74 3 7 125 56 173 8.82e-18 79.3
MS.gene70255.t1 MTR_7g113800 41.463 82 44 2 47 125 86 166 1.01e-17 79.0
MS.gene70255.t1 MTR_3g071300 36.752 117 69 3 11 124 37 151 1.08e-17 76.3
MS.gene70255.t1 MTR_2g096350 61.702 47 18 0 75 121 131 177 1.17e-17 77.0
MS.gene70255.t1 MTR_3g464780 42.353 85 46 1 44 125 94 178 1.21e-17 77.8
MS.gene70255.t1 MTR_4g063070 41.975 81 46 1 42 121 298 378 1.55e-17 79.0
MS.gene70255.t1 MTR_4g129420 43.421 76 43 0 50 125 115 190 2.71e-17 78.6
MS.gene70255.t1 MTR_2g436100 40.000 80 47 1 42 121 83 161 3.15e-17 77.0
MS.gene70255.t1 MTR_4g093830 31.008 129 78 2 31 159 105 222 4.40e-17 77.4
MS.gene70255.t1 MTR_5g064980 44.000 75 40 1 52 124 108 182 6.94e-17 77.0
MS.gene70255.t1 MTR_1g492830 38.158 76 47 0 51 126 60 135 7.26e-17 75.1
MS.gene70255.t1 MTR_5g066250 38.636 88 46 2 41 121 116 202 1.29e-16 76.3
MS.gene70255.t1 MTR_5g030010 38.710 93 54 2 52 144 122 211 1.93e-16 75.5
MS.gene70255.t1 MTR_8g089880 37.500 80 49 1 52 131 127 205 2.83e-16 74.3
MS.gene70255.t1 MTR_8g066780 37.234 94 58 1 52 144 114 207 4.57e-16 74.3
MS.gene70255.t1 MTR_5g026730 34.579 107 65 3 44 146 55 160 5.75e-16 71.6
MS.gene70255.t1 MTR_4g030070 32.110 109 61 3 25 129 61 160 6.12e-16 72.4
MS.gene70255.t1 MTR_7g116180 40.789 76 43 1 51 124 66 141 7.14e-16 71.6
MS.gene70255.t1 MTR_3g100400 41.667 72 41 1 50 121 128 198 7.83e-16 73.9
MS.gene70255.t1 MTR_7g108855 36.957 92 49 2 53 135 67 158 1.10e-15 71.2
MS.gene70255.t1 MTR_1g070425 40.789 76 43 1 51 124 67 142 1.22e-15 70.9
MS.gene70255.t1 MTR_2g009310 60.000 45 18 0 77 121 159 203 1.32e-15 73.2
MS.gene70255.t1 MTR_5g064890 53.061 49 23 0 77 125 152 200 2.69e-15 72.4
MS.gene70255.t1 MTR_2g055790 39.326 89 50 1 37 125 62 146 3.55e-15 70.1
MS.gene70255.t1 MTR_3g114500 40.964 83 44 3 40 121 35 113 4.62e-15 68.2
MS.gene70255.t1 MTR_8g032690 40.580 69 38 1 79 147 19 84 4.98e-15 67.4
MS.gene70255.t1 MTR_2g090950 39.744 78 42 1 49 121 88 165 6.85e-15 70.1
MS.gene70255.t1 MTR_2g090905 41.558 77 40 1 50 121 37 113 7.06e-15 67.4
MS.gene70255.t1 MTR_3g091620 38.961 77 46 1 49 125 98 173 7.62e-15 70.9
MS.gene70255.t1 MTR_5g009210 39.024 82 49 1 42 122 277 358 8.67e-15 70.9
MS.gene70255.t1 MTR_5g034790 41.558 77 40 2 50 124 114 187 8.82e-15 70.9
MS.gene70255.t1 MTR_1g070140 38.961 77 47 0 45 121 96 172 9.90e-15 70.5
MS.gene70255.t1 MTR_3g086700 39.286 84 46 2 43 121 34 117 1.33e-14 68.2
MS.gene70255.t1 MTR_1g056350 33.684 95 59 2 49 140 71 164 1.39e-14 67.8
MS.gene70255.t1 MTR_8g028465 36.842 76 45 1 47 122 85 157 1.47e-14 68.6
MS.gene70255.t1 MTR_3g012550 29.245 106 73 2 17 121 46 150 1.49e-14 67.8
MS.gene70255.t1 MTR_1g074190 36.905 84 44 2 45 121 92 173 1.53e-14 70.1
MS.gene70255.t1 MTR_5g009190 37.805 82 50 1 42 122 256 337 2.14e-14 69.7
MS.gene70255.t1 MTR_4g108830 35.714 98 60 2 26 122 122 217 2.15e-14 68.2
MS.gene70255.t1 MTR_8g074900 40.000 75 40 1 50 124 156 225 2.71e-14 68.2
MS.gene70255.t1 MTR_6g007737 38.667 75 45 1 50 124 131 204 2.85e-14 69.3
MS.gene70255.t1 MTR_5g092790 42.466 73 39 2 51 121 156 227 2.89e-14 68.2
MS.gene70255.t1 MTR_4g106680 38.889 72 43 1 50 121 104 174 2.92e-14 68.9
MS.gene70255.t1 MTR_3g086730 39.080 87 48 2 43 124 34 120 2.94e-14 68.2
MS.gene70255.t1 MTR_8g063660 37.662 77 47 1 50 126 66 141 3.07e-14 69.3
MS.gene70255.t1 MTR_4g108830 33.019 106 68 2 18 122 86 189 4.52e-14 67.0
MS.gene70255.t1 MTR_6g007670 42.254 71 39 1 51 121 7 75 5.55e-14 67.8
MS.gene70255.t1 MTR_6g007670 43.662 71 40 0 51 121 144 214 1.17e-12 63.9
MS.gene70255.t1 MTR_7g059360 42.029 69 39 1 55 122 133 201 6.14e-14 67.4
MS.gene70255.t1 MTR_5g076990 38.776 98 56 2 28 121 51 148 6.20e-14 68.2
MS.gene70255.t1 MTR_7g079280 31.858 113 62 3 52 163 80 178 6.30e-14 66.2
MS.gene70255.t1 MTR_8g099495 40.278 72 42 1 52 122 319 390 7.77e-14 68.2
MS.gene70255.t1 MTR_5g026720 53.488 43 20 0 79 121 93 135 8.53e-14 65.5
MS.gene70255.t1 MTR_2g041200 49.091 55 28 0 67 121 97 151 1.19e-13 65.5
MS.gene70255.t1 MTR_7g079290 43.103 58 33 0 74 131 150 207 1.32e-13 66.2
MS.gene70255.t1 MTR_5g022920 36.842 76 47 1 50 124 159 234 1.45e-13 66.2
MS.gene70255.t1 MTR_6g007680 40.845 71 41 1 51 121 39 108 1.61e-13 64.7
MS.gene70255.t1 MTR_3g091200 38.028 71 43 1 52 121 303 373 2.15e-13 67.0
MS.gene70255.t1 MTR_5g092750 55.769 52 22 1 70 121 177 227 2.69e-13 65.5
MS.gene70255.t1 MTR_5g009200 37.037 81 50 1 42 121 312 392 2.78e-13 66.6
MS.gene70255.t1 MTR_3g087900 40.449 89 44 4 38 125 35 115 2.80e-13 64.3
MS.gene70255.t1 MTR_1g026070 35.616 73 43 1 49 121 45 113 3.27e-13 63.5
MS.gene70255.t1 MTR_8g019710 57.778 45 19 0 77 121 52 96 7.23e-13 62.8
MS.gene70255.t1 MTR_8g071815 53.488 43 20 0 79 121 90 132 7.59e-13 63.5
MS.gene70255.t1 MTR_8g072020 47.692 65 32 2 58 121 385 448 8.03e-13 65.5
MS.gene70255.t1 MTR_8g072020 47.692 65 32 2 58 121 424 487 9.13e-13 65.5
MS.gene70255.t1 MTR_3g078120 34.524 84 54 1 39 121 44 127 1.63e-12 62.0
MS.gene70255.t1 MTR_8g066740 36.735 98 58 2 28 121 51 148 1.89e-12 63.9
MS.gene70255.t1 MTR_8g099515 40.260 77 43 2 48 122 305 380 2.05e-12 64.3
MS.gene70255.t1 MTR_7g116200 32.609 92 56 2 30 121 50 135 3.57e-12 61.6
MS.gene70255.t1 MTR_7g117350 35.526 76 44 1 52 122 282 357 4.97e-12 63.2
MS.gene70255.t1 MTR_7g117350 35.526 76 44 1 52 122 290 365 5.10e-12 63.2
MS.gene70255.t1 MTR_8g027745 34.568 81 51 2 44 122 277 357 6.92e-12 62.8
MS.gene70255.t1 MTR_6g055030 50.000 50 24 1 81 129 97 146 8.60e-12 62.0
MS.gene70255.t1 MTR_2g079320 32.075 106 66 2 25 124 99 204 1.01e-11 60.8
MS.gene70255.t1 MTR_8g027980 33.333 75 48 1 55 127 93 167 1.06e-11 61.6
MS.gene70255.t1 MTR_3g078540 42.857 63 35 1 66 127 66 128 1.57e-11 59.3
MS.gene70255.t1 MTR_4g022410 46.429 56 30 0 66 121 100 155 1.70e-11 60.1
MS.gene70255.t1 MTR_8g009190 46.939 49 26 0 77 125 103 151 2.34e-11 60.8
MS.gene70255.t1 MTR_7g096690 32.500 80 51 2 45 121 63 142 2.76e-11 60.8
MS.gene70255.t1 MTR_2g044570 40.741 54 32 0 78 131 82 135 2.79e-11 60.5
MS.gene70255.t1 MTR_5g096410 36.458 96 46 3 43 124 244 338 3.48e-11 60.5
MS.gene70255.t1 MTR_5g096410 36.458 96 46 3 43 124 232 326 3.53e-11 60.5
MS.gene70255.t1 MTR_5g096410 36.458 96 46 3 43 124 241 335 3.66e-11 60.5
MS.gene70255.t1 MTR_4g106960 55.556 45 19 1 77 121 176 219 3.93e-11 60.5
MS.gene70255.t1 MTR_3g078520 33.708 89 58 1 34 121 57 145 4.43e-11 58.5
MS.gene70255.t1 MTR_4g106960 55.556 45 19 1 77 121 176 219 4.88e-11 60.1
MS.gene70255.t1 MTR_4g106960 55.556 45 19 1 77 121 233 276 4.95e-11 60.1
MS.gene70255.t1 MTR_3g081030 33.333 90 56 2 42 131 86 171 5.18e-11 59.3
MS.gene70255.t1 MTR_4g106960 55.556 45 19 1 77 121 233 276 5.75e-11 60.1
MS.gene70255.t1 MTR_7g116210 48.837 43 22 0 79 121 35 77 5.96e-11 57.0
MS.gene70255.t1 MTR_5g010100 32.000 100 64 3 28 125 31 128 7.43e-11 57.4
MS.gene70255.t1 MTR_4g129335 32.967 91 60 1 47 137 71 160 8.15e-11 58.2
MS.gene70255.t1 MTR_4g129370 32.967 91 60 1 47 137 71 160 8.15e-11 58.2
MS.gene70255.t1 MTR_1g096780 36.111 72 44 2 52 122 208 278 9.96e-11 59.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene70255.t1 AT1G49220 60.294 136 50 3 23 155 80 214 6.02e-50 161
MS.gene70255.t1 AT1G49200 55.862 145 60 3 23 164 81 224 8.27e-50 160
MS.gene70255.t1 AT3G18773 53.793 145 64 2 23 164 74 218 4.22e-49 158
MS.gene70255.t1 AT1G49210 61.017 118 43 1 50 164 106 223 1.00e-48 157
MS.gene70255.t1 AT1G49230 53.793 145 60 2 23 163 78 219 1.71e-47 154
MS.gene70255.t1 AT5G05280 53.982 113 42 3 23 135 67 169 4.42e-34 118
MS.gene70255.t1 AT3G10910 48.598 107 50 2 23 125 55 160 7.16e-30 107
MS.gene70255.t1 AT1G20823 45.794 107 53 2 23 125 52 157 2.69e-28 104
MS.gene70255.t1 AT1G76410 47.706 109 54 3 23 130 50 156 3.34e-28 103
MS.gene70255.t1 AT5G01880 44.737 114 52 5 23 135 56 159 6.46e-27 99.8
MS.gene70255.t1 AT2G17450 44.118 102 47 3 38 132 58 156 1.95e-23 91.3
MS.gene70255.t1 AT5G47610 59.677 62 25 0 60 121 88 149 1.33e-22 88.6
MS.gene70255.t1 AT4G35480 40.800 125 54 4 23 132 48 167 6.22e-22 87.8
MS.gene70255.t1 AT3G05200 34.328 134 65 3 37 149 84 215 1.28e-19 84.7
MS.gene70255.t1 AT1G72200 34.074 135 70 3 20 151 83 201 1.30e-19 84.7
MS.gene70255.t1 AT2G27940 37.895 95 57 1 38 132 101 193 2.18e-19 82.0
MS.gene70255.t1 AT4G40070 36.792 106 64 2 52 154 95 200 3.04e-19 82.8
MS.gene70255.t1 AT1G72310 48.684 76 37 1 50 125 100 173 5.06e-19 82.4
MS.gene70255.t1 AT4G17245 57.377 61 25 1 62 121 85 145 9.59e-19 78.6
MS.gene70255.t1 AT1G53820 41.758 91 48 3 50 138 93 180 1.42e-18 80.9
MS.gene70255.t1 AT3G14320 49.296 71 34 1 52 122 63 131 1.61e-18 79.0
MS.gene70255.t1 AT3G16720 32.773 119 71 4 41 152 79 195 4.21e-18 79.7
MS.gene70255.t1 AT4G15975 32.836 134 74 3 33 164 32 151 5.01e-18 78.2
MS.gene70255.t1 AT2G20030 39.175 97 56 2 52 146 98 193 1.11e-17 79.3
MS.gene70255.t1 AT2G25410 36.752 117 72 1 7 121 253 369 1.17e-17 79.0
MS.gene70255.t1 AT5G57750 41.096 73 43 0 50 122 93 165 1.23e-17 76.6
MS.gene70255.t1 AT4G30400 43.056 72 41 0 50 121 105 176 1.27e-17 79.3
MS.gene70255.t1 AT5G27420 45.122 82 41 2 48 126 91 171 1.36e-17 79.0
MS.gene70255.t1 AT2G35000 42.857 77 42 1 51 125 105 181 1.38e-17 79.0
MS.gene70255.t1 AT4G09120 46.053 76 39 1 51 124 93 168 2.42e-17 77.8
MS.gene70255.t1 AT1G74410 33.858 127 71 3 5 124 101 221 2.42e-17 76.3
MS.gene70255.t1 AT4G09130 44.872 78 41 1 49 124 88 165 3.64e-17 77.4
MS.gene70255.t1 AT1G28040 39.583 96 55 2 27 121 202 295 4.74e-17 76.6
MS.gene70255.t1 AT4G09110 43.590 78 42 1 49 124 91 168 5.13e-17 76.6
MS.gene70255.t1 AT4G17905 66.667 45 15 0 77 121 153 197 5.16e-17 76.6
MS.gene70255.t1 AT4G09100 40.000 80 46 2 45 122 49 128 5.50e-17 73.2
MS.gene70255.t1 AT4G17905 66.667 45 15 0 77 121 179 223 6.00e-17 76.6
MS.gene70255.t1 AT1G35330 42.857 77 42 1 50 124 98 174 6.38e-17 76.6
MS.gene70255.t1 AT3G03550 59.184 49 20 0 77 125 157 205 7.71e-17 76.6
MS.gene70255.t1 AT5G17600 43.056 72 40 1 50 121 114 184 7.82e-17 76.6
MS.gene70255.t1 AT2G18650 43.421 76 43 0 50 125 97 172 7.89e-17 77.0
MS.gene70255.t1 AT4G28890 43.662 71 39 1 52 122 97 166 8.30e-17 77.0
MS.gene70255.t1 AT1G22500 35.398 113 65 3 17 125 56 164 1.08e-16 76.3
MS.gene70255.t1 AT1G04360 35.455 110 60 3 23 121 67 176 2.21e-16 75.5
MS.gene70255.t1 AT1G32361 38.235 102 60 2 23 124 101 199 6.31e-16 73.9
MS.gene70255.t1 AT5G05810 41.667 72 41 1 50 121 118 188 1.32e-15 73.6
MS.gene70255.t1 AT5G66070 41.558 77 42 2 48 124 148 221 1.36e-15 71.6
MS.gene70255.t1 AT5G66070 41.558 77 42 2 48 124 148 221 1.36e-15 71.6
MS.gene70255.t1 AT2G35420 43.056 72 40 1 50 121 75 145 1.43e-15 72.0
MS.gene70255.t1 AT5G10380 40.541 74 43 1 52 125 109 181 1.94e-15 72.4
MS.gene70255.t1 AT2G46493 36.047 86 54 1 37 121 95 180 2.08e-15 70.5
MS.gene70255.t1 AT5G66070 41.558 77 42 2 48 124 172 245 2.28e-15 71.2
MS.gene70255.t1 AT2G34990 33.333 96 62 1 28 121 65 160 2.30e-15 72.4
MS.gene70255.t1 AT2G34990 33.333 96 62 1 28 121 43 138 2.36e-15 72.0
MS.gene70255.t1 AT3G48030 37.333 75 47 0 50 124 100 174 2.59e-15 71.6
MS.gene70255.t1 AT1G72220 57.778 45 19 0 77 121 175 219 2.75e-15 72.4
MS.gene70255.t1 AT4G17920 37.778 90 54 1 37 124 66 155 2.94e-15 71.6
MS.gene70255.t1 AT3G48030 37.333 75 47 0 50 124 178 252 3.73e-15 72.0
MS.gene70255.t1 AT2G35910 35.955 89 56 1 52 140 121 208 4.35e-15 70.1
MS.gene70255.t1 AT4G33565 43.662 71 38 1 77 145 215 285 5.26e-15 71.6
MS.gene70255.t1 AT5G42200 37.500 80 49 1 42 121 68 146 7.42e-15 68.6
MS.gene70255.t1 AT5G07040 34.568 81 51 2 44 122 57 137 1.20e-14 67.8
MS.gene70255.t1 AT1G23980 38.158 76 46 1 50 125 116 190 1.43e-14 70.5
MS.gene70255.t1 AT2G46495 36.082 97 59 2 27 121 267 362 1.44e-14 70.5
MS.gene70255.t1 AT5G06490 39.474 76 40 1 52 121 96 171 1.67e-14 68.2
MS.gene70255.t1 AT2G46495 36.082 97 59 2 27 121 239 334 1.73e-14 70.1
MS.gene70255.t1 AT4G10160 37.838 74 44 1 52 125 72 143 1.88e-14 68.6
MS.gene70255.t1 AT5G58580 40.789 76 45 0 50 125 109 184 1.91e-14 69.7
MS.gene70255.t1 AT3G19140 42.254 71 39 1 52 122 54 122 2.16e-14 66.6
MS.gene70255.t1 AT3G62690 35.577 104 55 3 53 154 88 181 2.38e-14 68.9
MS.gene70255.t1 AT3G18930 36.047 86 46 2 52 128 120 205 3.23e-14 69.3
MS.gene70255.t1 AT3G18930 36.047 86 46 2 52 128 120 205 3.23e-14 69.3
MS.gene70255.t1 AT3G18930 36.047 86 46 2 52 128 120 205 3.23e-14 69.3
MS.gene70255.t1 AT3G11110 36.364 121 72 2 1 121 34 149 4.91e-14 66.2
MS.gene70255.t1 AT2G46494 31.959 97 65 1 27 122 263 359 5.65e-14 68.6
MS.gene70255.t1 AT5G53110 38.889 72 43 1 52 122 302 373 5.71e-14 68.6
MS.gene70255.t1 AT4G10150 36.486 74 45 1 52 125 86 157 6.53e-14 67.4
MS.gene70255.t1 AT2G46160 36.145 83 46 1 52 127 104 186 6.88e-14 67.0
MS.gene70255.t1 AT2G46160 36.145 83 46 1 52 127 104 186 6.88e-14 67.0
MS.gene70255.t1 AT1G33480 30.189 106 69 3 48 152 71 172 7.60e-14 67.4
MS.gene70255.t1 AT2G34000 36.559 93 55 2 51 140 60 151 1.44e-13 64.7
MS.gene70255.t1 AT5G40250 50.000 48 24 0 78 125 142 189 1.47e-13 67.4
MS.gene70255.t1 AT5G36001 59.574 47 19 0 76 122 261 307 1.74e-13 67.0
MS.gene70255.t1 AT4G35840 38.750 80 41 2 50 124 160 236 2.52e-13 65.9
MS.gene70255.t1 AT3G61550 31.746 126 66 4 45 160 92 207 2.74e-13 65.5
MS.gene70255.t1 AT2G47560 41.096 73 42 1 50 121 78 150 2.94e-13 65.5
MS.gene70255.t1 AT2G18670 34.667 75 49 0 47 121 78 152 2.98e-13 64.7
MS.gene70255.t1 AT5G43420 56.818 44 19 0 78 121 137 180 4.81e-13 65.9
MS.gene70255.t1 AT1G35630 35.714 98 61 2 55 151 209 305 5.16e-13 65.9
MS.gene70255.t1 AT2G17730 54.545 44 20 0 79 122 196 239 6.28e-13 64.7
MS.gene70255.t1 AT1G35625 34.694 98 62 2 55 151 209 305 2.59e-12 63.5
MS.gene70255.t1 AT4G26400 44.118 68 30 2 54 121 223 282 2.96e-12 63.5
MS.gene70255.t1 AT4G26400 44.118 68 30 2 54 121 223 282 2.96e-12 63.5
MS.gene70255.t1 AT2G42360 38.028 71 44 0 51 121 80 150 3.05e-12 62.8
MS.gene70255.t1 AT2G42350 37.333 75 45 1 47 121 70 142 3.59e-12 62.4
MS.gene70255.t1 AT1G53010 50.000 50 25 0 78 127 129 178 7.95e-12 60.8
MS.gene70255.t1 AT5G56340 44.118 68 30 2 54 121 241 300 1.04e-11 62.4
MS.gene70255.t1 AT4G26580 35.632 87 50 2 43 124 248 333 1.07e-11 62.0
MS.gene70255.t1 AT4G26580 35.632 87 50 2 43 124 248 333 1.07e-11 62.0
MS.gene70255.t1 AT5G52150 37.500 96 52 3 26 114 104 198 1.45e-11 60.5
MS.gene70255.t1 AT2G37580 48.936 47 24 0 75 121 138 184 1.54e-11 60.8
MS.gene70255.t1 AT3G47990 52.000 50 23 1 72 121 171 219 1.69e-11 61.2
MS.gene70255.t1 AT3G47990 52.000 50 23 1 72 121 171 219 1.69e-11 61.2
MS.gene70255.t1 AT3G47990 52.000 50 23 1 72 121 171 219 1.69e-11 61.2
MS.gene70255.t1 AT3G47990 52.000 50 23 1 72 121 228 276 1.88e-11 61.6
MS.gene70255.t1 AT3G47990 52.000 50 23 1 72 121 212 260 1.97e-11 61.2
MS.gene70255.t1 AT3G20395 30.000 100 67 1 25 124 120 216 2.58e-11 60.1
MS.gene70255.t1 AT5G46650 36.709 79 47 2 49 124 82 160 2.63e-11 60.8
MS.gene70255.t1 AT4G11360 35.484 93 55 3 35 125 44 133 3.91e-11 58.5
MS.gene70255.t1 AT2G03000 51.064 47 22 1 78 124 480 525 4.42e-11 60.5
MS.gene70255.t1 AT3G61180 35.870 92 56 2 47 136 289 379 4.87e-11 60.5
MS.gene70255.t1 AT4G30370 35.616 73 46 1 50 122 87 158 6.88e-11 58.2
MS.gene70255.t1 AT3G60966 55.814 43 19 0 79 121 62 104 6.98e-11 57.4
MS.gene70255.t1 AT4G35840 38.202 89 48 2 43 124 180 268 8.54e-11 59.3

Find 37 sgRNAs with CRISPR-Local

Find 49 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGAGTTGAAACTTCCAAATT+TGG 0.155862 4.1:+8808735 MS.gene70255:CDS
ACACACTCTGTATCCAAATT+TGG 0.282885 4.1:-8808748 None:intergenic
TGGATCGTTATAATAGTTTC+TGG 0.322018 4.1:-8808961 None:intergenic
CTTGAAACTTGTCAGAAGAT+TGG 0.343028 4.1:+8808904 MS.gene70255:CDS
TGAAAACCATGGTTGCATTT+AGG 0.347715 4.1:-8808817 None:intergenic
TAGTTACGCTCCAAAGCTTC+AGG 0.368913 4.1:-8808994 None:intergenic
ACTAGAAGAGTCGTTGTTGA+TGG 0.380702 4.1:-8808626 None:intergenic
AAGCTTTGGAGCGTAACTAT+AGG 0.382409 4.1:+8808998 MS.gene70255:CDS
ACCACTAGAACCTGAAGCTT+TGG 0.391611 4.1:+8808984 MS.gene70255:CDS
CCATTATTAGGTGTGCCTTA+AGG 0.397999 4.1:+8808590 MS.gene70255:intron
TCTGGCACTGGCAACACAAT+TGG 0.406141 4.1:-8808943 None:intergenic
ATGTTCGTTGCATTGACAAA+TGG 0.437642 4.1:+8808839 MS.gene70255:CDS
CGATTGAGGTGAAGGATTGC+TGG 0.439689 4.1:-8808653 None:intergenic
AGCTTTGGAGCGTAACTATA+GGG 0.446064 4.1:+8808999 MS.gene70255:CDS
CAGCAATCCTTCACCTCAAT+CGG 0.461316 4.1:+8808654 MS.gene70255:CDS
GTTATAATAGTTTCTGGCAC+TGG 0.477505 4.1:-8808955 None:intergenic
ATTGAATAGTTGTGAAGTAA+AGG 0.485238 4.1:-8808368 None:intergenic
AAGCTTCAGGTTCTAGTGGT+TGG 0.485771 4.1:-8808981 None:intergenic
TTGCATTGACAAATGGCTAA+AGG 0.492896 4.1:+8808846 MS.gene70255:CDS
TTGTTGACCGATTGAGGTGA+AGG 0.495226 4.1:-8808661 None:intergenic
AAGAAGGCATTGTCTACACT+TGG 0.501939 4.1:-8808884 None:intergenic
GGCTACGTTTGAAAACCTTA+AGG 0.504858 4.1:-8808605 None:intergenic
ATTCCTTTGTTGACCGATTG+AGG 0.506390 4.1:-8808667 None:intergenic
TTGTGGAATCTCACACAAGA+AGG 0.511006 4.1:+8808398 MS.gene70255:CDS
TCAGAAGATTGGTGGGTCGC+AGG 0.526432 4.1:+8808915 MS.gene70255:CDS
GAAACTTGTCAGAAGATTGG+TGG 0.537375 4.1:+8808907 MS.gene70255:CDS
ACTATTCAATGAGCTTCTTG+TGG 0.547062 4.1:+8808381 MS.gene70255:CDS
TCTTCTGACAAGTTTCAAGA+AGG 0.548350 4.1:-8808900 None:intergenic
TCCAAAGCTTCAGGTTCTAG+TGG 0.589399 4.1:-8808985 None:intergenic
AAACTTGTCAGAAGATTGGT+GGG 0.594232 4.1:+8808908 MS.gene70255:CDS
TCAGTTGAGTAGCTCACTGT+GGG 0.618570 4.1:-8808715 None:intergenic
TCACCTCAATCGGTCAACAA+AGG 0.632009 4.1:+8808664 MS.gene70255:CDS
AGAAGGCATTGTCTACACTT+GGG 0.633040 4.1:-8808883 None:intergenic
CTCAGTTGAGTAGCTCACTG+TGG 0.674782 4.1:-8808716 None:intergenic
TGTCTCTCAGAGTTCACGAA+GGG 0.679698 4.1:+8808775 MS.gene70255:CDS
TGCAACGAACATGAAAACCA+TGG 0.695842 4.1:-8808828 None:intergenic
ATGTCTCTCAGAGTTCACGA+AGG 0.727660 4.1:+8808774 MS.gene70255:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
! AATATGAGTCTGTTGAATTA+TGG - chr4.1:8808486-8808505 None:intergenic 25.0%
! ATTGAATAGTTGTGAAGTAA+AGG - chr4.1:8808371-8808390 None:intergenic 25.0%
! TTGCATTAAACTCCATTATT+AGG + chr4.1:8808578-8808597 MS.gene70255:intron 25.0%
!! AATTCAACAGACTCATATTT+TGG + chr4.1:8808487-8808506 MS.gene70255:intron 25.0%
!!! TGTTGAATTATGGTTTTTTG+TGG - chr4.1:8808476-8808495 None:intergenic 25.0%
TGGATCGTTATAATAGTTTC+TGG - chr4.1:8808964-8808983 None:intergenic 30.0%
! TGAGTTGAAACTTCCAAATT+TGG + chr4.1:8808735-8808754 MS.gene70255:CDS 30.0%
! TTAGTGATTGATGATCAACT+GGG - chr4.1:8808438-8808457 None:intergenic 30.0%
!!! TATGGTTTTTTGTGGAAACA+GGG - chr4.1:8808468-8808487 None:intergenic 30.0%
!!! TTATGGTTTTTTGTGGAAAC+AGG - chr4.1:8808469-8808488 None:intergenic 30.0%
AAACTTGTCAGAAGATTGGT+GGG + chr4.1:8808908-8808927 MS.gene70255:CDS 35.0%
ACACACTCTGTATCCAAATT+TGG - chr4.1:8808751-8808770 None:intergenic 35.0%
ACTATTCAATGAGCTTCTTG+TGG + chr4.1:8808381-8808400 MS.gene70255:CDS 35.0%
CTTGAAACTTGTCAGAAGAT+TGG + chr4.1:8808904-8808923 MS.gene70255:CDS 35.0%
TCTTCTGACAAGTTTCAAGA+AGG - chr4.1:8808903-8808922 None:intergenic 35.0%
TGAAAACCATGGTTGCATTT+AGG - chr4.1:8808820-8808839 None:intergenic 35.0%
! ATGTTCGTTGCATTGACAAA+TGG + chr4.1:8808839-8808858 MS.gene70255:CDS 35.0%
! ATTTTGCCTAAATGCAACCA+TGG + chr4.1:8808811-8808830 MS.gene70255:CDS 35.0%
! GTTAGTGATTGATGATCAAC+TGG - chr4.1:8808439-8808458 None:intergenic 35.0%
! TTGCATTGACAAATGGCTAA+AGG + chr4.1:8808846-8808865 MS.gene70255:CDS 35.0%
!! GTTATAATAGTTTCTGGCAC+TGG - chr4.1:8808958-8808977 None:intergenic 35.0%
!!! ATGGTTTTTTGTGGAAACAG+GGG - chr4.1:8808467-8808486 None:intergenic 35.0%
ACTAGAAGAGTCGTTGTTGA+TGG - chr4.1:8808629-8808648 None:intergenic 40.0%
ATTCCTTTGTTGACCGATTG+AGG - chr4.1:8808670-8808689 None:intergenic 40.0%
CCATTATTAGGTGTGCCTTA+AGG + chr4.1:8808590-8808609 MS.gene70255:intron 40.0%
CCTTAAGGCACACCTAATAA+TGG - chr4.1:8808593-8808612 None:intergenic 40.0%
GAAACTTGTCAGAAGATTGG+TGG + chr4.1:8808907-8808926 MS.gene70255:CDS 40.0%
GGCTACGTTTGAAAACCTTA+AGG - chr4.1:8808608-8808627 None:intergenic 40.0%
TGCAACGAACATGAAAACCA+TGG - chr4.1:8808831-8808850 None:intergenic 40.0%
TTGTGGAATCTCACACAAGA+AGG + chr4.1:8808398-8808417 MS.gene70255:CDS 40.0%
!! AAGAAGGCATTGTCTACACT+TGG - chr4.1:8808887-8808906 None:intergenic 40.0%
!! AAGCTTTGGAGCGTAACTAT+AGG + chr4.1:8808998-8809017 MS.gene70255:CDS 40.0%
!! AGAAGGCATTGTCTACACTT+GGG - chr4.1:8808886-8808905 None:intergenic 40.0%
!! AGCTTTGGAGCGTAACTATA+GGG + chr4.1:8808999-8809018 MS.gene70255:CDS 40.0%
ACCACTAGAACCTGAAGCTT+TGG + chr4.1:8808984-8809003 MS.gene70255:CDS 45.0%
ATGTCTCTCAGAGTTCACGA+AGG + chr4.1:8808774-8808793 MS.gene70255:CDS 45.0%
CAGCAATCCTTCACCTCAAT+CGG + chr4.1:8808654-8808673 MS.gene70255:CDS 45.0%
TAGTTACGCTCCAAAGCTTC+AGG - chr4.1:8808997-8809016 None:intergenic 45.0%
TCACCTCAATCGGTCAACAA+AGG + chr4.1:8808664-8808683 MS.gene70255:CDS 45.0%
TCAGTTGAGTAGCTCACTGT+GGG - chr4.1:8808718-8808737 None:intergenic 45.0%
TGTCTCTCAGAGTTCACGAA+GGG + chr4.1:8808775-8808794 MS.gene70255:CDS 45.0%
TTGTTGACCGATTGAGGTGA+AGG - chr4.1:8808664-8808683 None:intergenic 45.0%
! AAGCTTCAGGTTCTAGTGGT+TGG - chr4.1:8808984-8809003 None:intergenic 45.0%
! TCCAAAGCTTCAGGTTCTAG+TGG - chr4.1:8808988-8809007 None:intergenic 45.0%
! TTTTGTGGAAACAGGGGAGT+TGG - chr4.1:8808461-8808480 None:intergenic 45.0%
CGATTGAGGTGAAGGATTGC+TGG - chr4.1:8808656-8808675 None:intergenic 50.0%
CTCAGTTGAGTAGCTCACTG+TGG - chr4.1:8808719-8808738 None:intergenic 50.0%
!! TCTGGCACTGGCAACACAAT+TGG - chr4.1:8808946-8808965 None:intergenic 50.0%
! TCAGAAGATTGGTGGGTCGC+AGG + chr4.1:8808915-8808934 MS.gene70255:CDS 55.0%


Chromosome Type Strat End Strand Name
chr4.1 gene 8808352 8809029 8808352 ID=MS.gene70255
chr4.1 mRNA 8808352 8809029 8808352 ID=MS.gene70255.t1;Parent=MS.gene70255
chr4.1 exon 8808352 8808419 8808352 ID=MS.gene70255.t1.exon1;Parent=MS.gene70255.t1
chr4.1 CDS 8808352 8808419 8808352 ID=cds.MS.gene70255.t1;Parent=MS.gene70255.t1
chr4.1 exon 8808600 8809029 8808600 ID=MS.gene70255.t1.exon2;Parent=MS.gene70255.t1
chr4.1 CDS 8808600 8809029 8808600 ID=cds.MS.gene70255.t1;Parent=MS.gene70255.t1
Gene Sequence

>MS.gene70255

ATGTATGCTTCTACTTCCTTTACTTCACAACTATTCAATGAGCTTCTTGTGGAATCTCACACAAGAAGGTTACTCATTCAAAACCCAGTTGATCATCAATCACTAACCAACTCCCCTGTTTCCACAAAAAACCATAATTCAACAGACTCATATTTTGGAGCTCGTGAATTTGATTCAAAAGTTGTGATGATACTTGCAGTCATATTATGTGTTTTTATTTGCTCACTTGCATTAAACTCCATTATTAGGTGTGCCTTAAGGTTTTCAAACGTAGCCATCAACAACGACTCTTCTAGTTCAACCAGCAATCCTTCACCTCAATCGGTCAACAAAGGAATCAAGAAGAAAGCTCTCAAGACATTTCCCACAGTGAGCTACTCAACTGAGTTGAAACTTCCAAATTTGGATACAGAGTGTGTGATATGTCTCTCAGAGTTCACGAAGGGTGAAAAGATACGCATTTTGCCTAAATGCAACCATGGTTTTCATGTTCGTTGCATTGACAAATGGCTAAAGGAACACTCATCATGTCCCAAGTGTAGACAATGCCTTCTTGAAACTTGTCAGAAGATTGGTGGGTCGCAGGTGCAACCAATTGTGTTGCCAGTGCCAGAAACTATTATAACGATCCAACCACTAGAACCTGAAGCTTTGGAGCGTAACTATAGGGAAATATAA
Protein sequence

>MS.gene70255.t1

MYASTSFTSQLFNELLVESHTRRCALRFSNVAINNDSSSSTSNPSPQSVNKGIKKKALKTFPTVSYSTELKLPNLDTECVICLSEFTKGEKIRILPKCNHGFHVRCIDKWLKEHSSCPKCRQCLLETCQKIGGSQVQPIVLPVPETIITIQPLEPEALERNYREI