AlfalfaGEDB | MS.gene31002

M. sativa cultivar XinJiangDaYe / MS.gene31002

KEGG: K19040
GO: -
PFAM: PF13639.9

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene31002.t1	XP_024633794.1	80.3	229	7	2	1	192	1	228	5.80E-94	353.6

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene31002.t1	Q6NQG7	62.0	129	44	2	63	189	94	219	2.0e-39	163.7

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene31002.t1	A0A396IZ09	80.3	229	7	2	1	192	1	228	4.2e-94	353.6

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR
MS.gene049319	MS.gene31002	0.994509	7.78E-208	-1.69E-46

PPI:

Gene1	Gene2	Type
MS.gene70257	MS.gene31002	PPI
MS.gene28424	MS.gene31002	PPI
MS.gene70256	MS.gene31002	PPI
MS.gene28430	MS.gene31002	PPI
MS.gene030653	MS.gene31002	PPI
MS.gene58111	MS.gene31002	PPI
MS.gene58106	MS.gene31002	PPI
MS.gene28426	MS.gene31002	PPI
MS.gene70250	MS.gene31002	PPI
MS.gene58108	MS.gene31002	PPI
MS.gene70253	MS.gene31002	PPI
MS.gene28427	MS.gene31002	PPI
MS.gene70254	MS.gene31002	PPI
MS.gene31002	MS.gene70254	PPI
MS.gene70255	MS.gene31002	PPI
MS.gene58104	MS.gene31002	PPI
MS.gene48772	MS.gene31002	PPI
MS.gene049319	MS.gene31002	PPI
MS.gene31002	MS.gene70255	PPI
MS.gene06444	MS.gene31002	PPI
MS.gene28428	MS.gene31002	PPI
MS.gene28429	MS.gene31002	PPI
MS.gene31002	MS.gene58110	PPI
MS.gene31002	MS.gene28431	PPI
MS.gene030652	MS.gene31002	PPI
MS.gene28431	MS.gene31002	PPI
MS.gene88015	MS.gene31002	PPI
MS.gene70249	MS.gene31002	PPI
MS.gene030659	MS.gene31002	PPI
MS.gene58105	MS.gene31002	PPI
MS.gene76770	MS.gene31002	PPI
MS.gene030651	MS.gene31002	PPI
MS.gene030655	MS.gene31002	PPI
MS.gene030660	MS.gene31002	PPI
MS.gene030654	MS.gene31002	PPI
MS.gene58107	MS.gene31002	PPI
MS.gene28425	MS.gene31002	PPI
MS.gene030658	MS.gene31002	PPI
MS.gene94889	MS.gene31002	PPI
MS.gene58110	MS.gene31002	PPI
MS.gene030657	MS.gene31002	PPI
MS.gene58109	MS.gene31002	PPI
MS.gene013346	MS.gene31002	PPI
MS.gene030656	MS.gene31002	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene31002.t1	MTR_3g095560	80.176	227	7	2	1	190	1	226	5.65e-127	357
MS.gene31002.t1	MTR_8g092960	52.444	225	62	6	1	190	1	215	4.17e-67	204
MS.gene31002.t1	MTR_8g092840	51.293	232	68	6	1	192	1	227	3.65e-66	202
MS.gene31002.t1	MTR_8g093010	49.780	227	70	7	1	191	1	219	1.57e-64	198
MS.gene31002.t1	MTR_8g092930	48.261	230	75	5	1	191	1	225	5.77e-64	197
MS.gene31002.t1	MTR_8g092985	50.935	214	62	5	1	176	1	209	1.69e-63	195
MS.gene31002.t1	MTR_8g092970	48.649	222	78	5	1	191	1	217	8.26e-63	194
MS.gene31002.t1	MTR_8g092990	51.502	233	67	5	1	192	1	228	2.20e-62	193
MS.gene31002.t1	MTR_3g094000	58.140	86	35	1	63	147	81	166	2.01e-29	107
MS.gene31002.t1	MTR_7g073200	55.294	85	35	2	63	146	71	153	1.12e-26	100
MS.gene31002.t1	MTR_5g024730	53.191	94	41	3	61	151	64	157	2.83e-25	97.8
MS.gene31002.t1	MTR_2g035800	56.579	76	32	1	68	143	71	145	1.55e-24	94.4
MS.gene31002.t1	MTR_3g116000	52.941	85	37	2	71	154	77	159	4.12e-24	94.4
MS.gene31002.t1	MTR_4g094725	59.740	77	30	1	68	143	73	149	1.57e-23	91.7
MS.gene31002.t1	MTR_8g073120	55.405	74	32	1	70	142	67	140	2.17e-23	92.4
MS.gene31002.t1	MTR_8g023400	46.154	78	39	2	73	149	92	167	6.88e-19	82.8
MS.gene31002.t1	MTR_1g100737	46.429	84	41	1	70	149	89	172	1.47e-18	79.7
MS.gene31002.t1	MTR_3g110190	44.444	81	44	1	68	148	61	140	2.68e-18	81.3
MS.gene31002.t1	MTR_3g464780	41.758	91	43	3	63	146	91	178	1.22e-17	78.6
MS.gene31002.t1	MTR_7g117540	57.895	57	24	0	92	148	93	149	1.67e-17	78.6
MS.gene31002.t1	MTR_7g116220	33.645	107	64	2	73	172	70	176	1.94e-17	76.3
MS.gene31002.t1	MTR_5g082940	44.595	74	40	1	73	145	75	148	4.41e-17	75.1
MS.gene31002.t1	MTR_2g096350	55.556	54	24	0	89	142	124	177	6.30e-17	75.9
MS.gene31002.t1	MTR_6g055030	48.611	72	35	1	73	142	97	168	6.44e-17	77.4
MS.gene31002.t1	MTR_7g113800	42.683	82	43	2	68	146	86	166	9.22e-17	77.4
MS.gene31002.t1	MTR_1g492830	41.333	75	44	0	73	147	61	135	9.84e-17	75.5
MS.gene31002.t1	MTR_4g030070	30.435	115	75	2	63	174	75	187	1.13e-16	75.5
MS.gene31002.t1	MTR_4g129420	41.250	80	47	0	71	150	115	194	1.32e-16	77.4
MS.gene31002.t1	MTR_8g089880	32.903	155	96	5	2	152	55	205	1.52e-16	75.9
MS.gene31002.t1	MTR_4g120270	63.636	44	16	0	99	142	103	146	1.95e-16	75.5
MS.gene31002.t1	MTR_4g093830	40.594	101	57	3	44	142	95	194	2.12e-16	76.3
MS.gene31002.t1	MTR_3g099650	42.105	76	42	1	73	146	107	182	2.14e-16	76.3
MS.gene31002.t1	MTR_5g030010	36.190	105	59	2	66	170	115	211	2.97e-16	75.9
MS.gene31002.t1	MTR_4g056590	42.308	78	40	2	73	150	100	172	3.15e-16	73.6
MS.gene31002.t1	MTR_3g071300	36.170	94	57	1	55	145	58	151	3.42e-16	72.8
MS.gene31002.t1	MTR_2g436100	34.259	108	60	2	64	161	84	190	4.64e-16	74.7
MS.gene31002.t1	MTR_7g108855	40.000	95	43	4	99	180	93	186	6.00e-16	72.8
MS.gene31002.t1	MTR_5g034790	38.947	95	49	2	71	165	114	199	6.15e-16	75.1
MS.gene31002.t1	MTR_3g086700	40.659	91	50	2	56	142	27	117	6.36e-16	72.4
MS.gene31002.t1	MTR_3g091620	31.690	142	72	4	5	146	57	173	9.94e-16	74.3
MS.gene31002.t1	MTR_6g087150	48.000	75	38	1	68	142	88	161	1.02e-15	74.3
MS.gene31002.t1	MTR_3g078450	44.595	74	40	1	73	145	76	149	1.18e-15	72.4
MS.gene31002.t1	MTR_2g090950	41.026	78	41	1	70	142	88	165	1.45e-15	72.8
MS.gene31002.t1	MTR_5g064980	40.909	88	46	2	60	145	99	182	1.52e-15	73.9
MS.gene31002.t1	MTR_2g055790	64.583	48	17	0	99	146	99	146	1.61e-15	71.6
MS.gene31002.t1	MTR_3g086730	40.426	94	52	2	56	145	27	120	1.65e-15	72.4
MS.gene31002.t1	MTR_5g064990	34.109	129	72	4	65	184	101	225	1.79e-15	73.9
MS.gene31002.t1	MTR_5g064890	33.929	112	71	3	36	146	91	200	2.18e-15	73.6
MS.gene31002.t1	MTR_1g082550	35.294	102	61	3	68	165	93	193	2.47e-15	73.2
MS.gene31002.t1	MTR_3g114500	41.176	85	45	3	59	142	33	113	2.58e-15	69.3
MS.gene31002.t1	MTR_7g116180	57.447	47	20	0	99	145	95	141	2.87e-15	70.5
MS.gene31002.t1	MTR_4g063070	40.000	80	47	1	64	142	299	378	3.39e-15	73.2
MS.gene31002.t1	MTR_5g076990	45.679	81	41	1	65	142	68	148	3.50e-15	72.4
MS.gene31002.t1	MTR_1g070425	41.333	75	42	1	73	145	68	142	3.96e-15	70.5
MS.gene31002.t1	MTR_2g090905	61.364	44	17	0	99	142	70	113	5.93e-15	68.6
MS.gene31002.t1	MTR_5g071930	59.184	49	20	0	99	147	88	136	6.60e-15	70.1
MS.gene31002.t1	MTR_3g078470	41.892	74	42	1	73	145	76	149	6.85e-15	70.5
MS.gene31002.t1	MTR_8g063660	40.260	77	45	1	71	147	66	141	8.42e-15	71.6
MS.gene31002.t1	MTR_8g066780	42.500	80	35	1	63	142	116	184	1.22e-14	71.2
MS.gene31002.t1	MTR_8g066740	38.235	102	55	2	49	142	47	148	1.23e-14	70.9
MS.gene31002.t1	MTR_2g009310	60.000	45	18	0	98	142	159	203	1.64e-14	71.2
MS.gene31002.t1	MTR_2g041200	46.774	62	33	0	81	142	90	151	1.77e-14	68.6
MS.gene31002.t1	MTR_6g007737	59.574	47	19	0	99	145	158	204	2.16e-14	70.9
MS.gene31002.t1	MTR_5g066250	40.000	75	44	1	68	142	129	202	3.03e-14	70.5
MS.gene31002.t1	MTR_1g043410	32.727	110	56	3	36	143	73	166	4.21e-14	69.7
MS.gene31002.t1	MTR_3g100400	56.818	44	19	0	99	142	155	198	4.50e-14	69.7
MS.gene31002.t1	MTR_5g092750	38.679	106	55	5	46	150	139	235	4.57e-14	68.6
MS.gene31002.t1	MTR_7g059360	39.744	78	46	1	83	159	141	218	9.74e-14	67.4
MS.gene31002.t1	MTR_6g007680	59.091	44	18	0	99	142	65	108	1.01e-13	65.9
MS.gene31002.t1	MTR_5g092790	58.696	46	19	0	97	142	182	227	1.26e-13	67.4
MS.gene31002.t1	MTR_5g026730	55.814	43	19	0	100	142	94	136	1.30e-13	66.2
MS.gene31002.t1	MTR_1g056350	39.241	79	44	2	73	148	74	151	1.49e-13	65.9
MS.gene31002.t1	MTR_1g026070	40.278	72	39	1	71	142	46	113	2.01e-13	64.7
MS.gene31002.t1	MTR_7g076250	37.143	70	44	0	73	142	63	132	2.43e-13	65.9
MS.gene31002.t1	MTR_3g012550	28.704	108	61	2	73	179	80	172	2.51e-13	65.5
MS.gene31002.t1	MTR_3g091200	37.500	72	44	1	72	142	302	373	3.08e-13	67.4
MS.gene31002.t1	MTR_1g070140	55.814	43	19	0	100	142	130	172	3.36e-13	67.0
MS.gene31002.t1	MTR_5g026720	53.488	43	20	0	100	142	93	135	3.85e-13	64.7
MS.gene31002.t1	MTR_4g106680	38.889	72	43	1	71	142	104	174	4.09e-13	66.6
MS.gene31002.t1	MTR_2g044570	44.828	58	32	0	96	153	79	136	4.62e-13	66.6
MS.gene31002.t1	MTR_3g081030	37.179	78	47	1	77	154	98	173	7.10e-13	65.1
MS.gene31002.t1	MTR_7g117350	35.526	76	44	1	73	143	290	365	9.82e-13	65.9
MS.gene31002.t1	MTR_7g117350	35.526	76	44	1	73	143	282	357	1.08e-12	65.9
MS.gene31002.t1	MTR_6g055030	60.976	41	16	0	102	142	97	137	1.16e-12	65.1
MS.gene31002.t1	MTR_6g007670	59.091	44	18	0	99	142	32	75	1.34e-12	64.7
MS.gene31002.t1	MTR_6g007670	42.697	89	49	2	74	160	146	234	2.34e-11	61.2
MS.gene31002.t1	MTR_7g116210	41.096	73	41	1	70	142	7	77	1.53e-12	62.0
MS.gene31002.t1	MTR_8g019710	57.778	45	19	0	98	142	52	96	1.65e-12	62.4
MS.gene31002.t1	MTR_8g074900	56.522	46	20	0	100	145	180	225	1.76e-12	63.9
MS.gene31002.t1	MTR_4g108830	29.371	143	92	3	1	143	84	217	1.85e-12	63.9
MS.gene31002.t1	MTR_8g071815	53.488	43	20	0	100	142	90	132	2.63e-12	62.8
MS.gene31002.t1	MTR_4g108830	39.189	74	43	1	70	143	118	189	2.99e-12	62.8
MS.gene31002.t1	MTR_8g009190	51.020	49	24	0	98	146	103	151	4.10e-12	63.9
MS.gene31002.t1	MTR_1g074190	50.000	44	22	0	99	142	130	173	4.14e-12	63.9
MS.gene31002.t1	MTR_7g116200	41.096	73	41	1	70	142	65	135	4.62e-12	62.0
MS.gene31002.t1	MTR_5g022920	44.828	58	32	0	86	143	175	232	5.49e-12	62.8
MS.gene31002.t1	MTR_3g078540	40.625	64	37	1	86	148	65	128	6.02e-12	61.2
MS.gene31002.t1	MTR_8g032690	46.154	52	28	0	100	151	19	70	6.89e-12	60.1
MS.gene31002.t1	MTR_8g028465	30.693	101	52	2	73	173	90	172	7.53e-12	62.0
MS.gene31002.t1	MTR_8g099515	36.709	79	49	1	66	143	302	380	8.14e-12	63.2
MS.gene31002.t1	MTR_8g099495	36.111	72	45	1	73	143	319	390	9.04e-12	63.2
MS.gene31002.t1	MTR_8g027745	36.111	72	45	1	72	142	285	356	9.88e-12	63.2
MS.gene31002.t1	MTR_7g079280	27.778	126	74	3	49	173	57	166	1.06e-11	61.2
MS.gene31002.t1	MTR_3g078120	31.373	102	58	1	53	142	26	127	1.32e-11	60.1
MS.gene31002.t1	MTR_4g106960	44.444	72	38	2	72	142	149	219	1.36e-11	62.4
MS.gene31002.t1	MTR_4g106960	44.928	69	36	2	75	142	152	219	1.56e-11	62.4
MS.gene31002.t1	MTR_5g009210	36.620	71	44	1	73	142	287	357	1.85e-11	62.4
MS.gene31002.t1	MTR_5g041310	49.091	55	26	2	89	142	103	156	1.95e-11	61.2
MS.gene31002.t1	MTR_5g009190	36.111	72	45	1	73	143	266	337	2.02e-11	62.0
MS.gene31002.t1	MTR_4g106960	56.000	50	21	1	93	142	228	276	2.10e-11	62.0
MS.gene31002.t1	MTR_4g106960	56.000	50	21	1	93	142	228	276	2.11e-11	62.0
MS.gene31002.t1	MTR_5g041330	55.556	45	19	1	98	142	103	146	2.19e-11	60.8
MS.gene31002.t1	MTR_8g072020	58.696	46	17	2	98	142	404	448	2.70e-11	62.0
MS.gene31002.t1	MTR_5g009200	36.620	71	44	1	73	142	322	392	2.87e-11	61.6
MS.gene31002.t1	MTR_8g072020	58.696	46	17	2	98	142	443	487	3.17e-11	61.6
MS.gene31002.t1	MTR_4g022410	44.643	56	31	0	87	142	100	155	3.98e-11	59.7
MS.gene31002.t1	MTR_7g100950	39.759	83	44	3	67	146	468	547	4.06e-11	61.6
MS.gene31002.t1	MTR_7g100950	39.759	83	44	3	67	146	470	549	4.10e-11	61.6
MS.gene31002.t1	MTR_4g116460	51.111	45	20	2	99	142	440	483	7.17e-11	60.8
MS.gene31002.t1	MTR_4g116460	51.111	45	20	2	99	142	483	526	7.63e-11	60.5

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene31002.t1	AT1G49230	61.538	130	45	2	62	189	93	219	1.61e-50	162
MS.gene31002.t1	AT1G49220	40.928	237	83	6	13	192	15	251	1.26e-47	156
MS.gene31002.t1	AT1G49200	56.693	127	53	1	66	192	102	226	5.43e-47	154
MS.gene31002.t1	AT1G49210	58.871	124	45	2	71	192	106	225	2.57e-46	152
MS.gene31002.t1	AT3G18773	52.000	125	56	2	69	192	99	220	1.59e-41	139
MS.gene31002.t1	AT1G20823	50.515	97	48	0	50	146	61	157	1.02e-29	108
MS.gene31002.t1	AT5G05280	62.667	75	26	1	73	147	88	160	6.33e-28	103
MS.gene31002.t1	AT1G76410	55.172	87	38	1	66	151	70	156	3.89e-27	102
MS.gene31002.t1	AT3G10910	57.692	78	32	1	69	146	84	160	8.66e-27	100
MS.gene31002.t1	AT5G01880	52.809	89	39	2	61	148	67	153	1.14e-25	97.4
MS.gene31002.t1	AT5G47610	57.627	59	25	0	84	142	91	149	1.69e-21	86.7
MS.gene31002.t1	AT3G05200	41.481	135	70	5	56	185	84	214	1.05e-20	88.6
MS.gene31002.t1	AT4G35480	40.187	107	50	2	71	163	70	176	6.68e-20	83.6
MS.gene31002.t1	AT4G17245	61.667	60	22	1	84	142	86	145	7.07e-20	82.4
MS.gene31002.t1	AT2G17450	49.383	81	35	2	71	145	67	147	1.26e-19	82.4
MS.gene31002.t1	AT1G53820	36.441	118	71	2	71	188	93	206	2.41e-19	84.0
MS.gene31002.t1	AT1G72310	42.735	117	56	3	47	161	74	181	2.87e-19	84.0
MS.gene31002.t1	AT4G40070	37.903	124	68	3	59	180	84	200	3.48e-18	80.9
MS.gene31002.t1	AT4G09120	46.154	78	40	1	70	145	91	168	1.64e-17	79.3
MS.gene31002.t1	AT1G35330	36.036	111	60	2	37	145	73	174	3.78e-17	78.2
MS.gene31002.t1	AT4G09110	45.333	75	39	1	70	142	91	165	4.10e-17	77.8
MS.gene31002.t1	AT3G14320	64.444	45	16	0	99	143	87	131	1.40e-16	74.7
MS.gene31002.t1	AT4G17905	31.788	151	94	4	3	146	53	201	1.78e-16	76.3
MS.gene31002.t1	AT5G57750	33.577	137	72	3	7	143	48	165	1.83e-16	74.7
MS.gene31002.t1	AT3G03550	61.224	49	19	0	98	146	157	205	1.85e-16	76.6
MS.gene31002.t1	AT3G16720	37.736	106	61	3	53	158	76	176	1.86e-16	75.9
MS.gene31002.t1	AT4G17905	32.192	146	90	4	8	146	84	227	2.01e-16	76.3
MS.gene31002.t1	AT4G09100	39.773	88	50	3	57	142	41	127	2.97e-16	72.0
MS.gene31002.t1	AT4G10160	31.008	129	75	2	64	180	63	189	3.01e-16	74.3
MS.gene31002.t1	AT5G27420	36.885	122	67	4	56	171	81	198	4.70e-16	75.5
MS.gene31002.t1	AT5G17600	47.143	70	36	1	73	142	116	184	7.17e-16	74.7
MS.gene31002.t1	AT2G35000	39.506	81	47	1	68	146	101	181	8.77e-16	74.7
MS.gene31002.t1	AT3G48030	40.000	75	45	0	71	145	100	174	9.05e-16	73.6
MS.gene31002.t1	AT3G48030	40.000	75	45	0	71	145	178	252	1.16e-15	74.3
MS.gene31002.t1	AT4G10150	35.870	92	57	1	55	146	68	157	1.35e-15	72.8
MS.gene31002.t1	AT4G30400	43.056	72	41	0	71	142	105	176	1.48e-15	74.3
MS.gene31002.t1	AT4G09130	44.000	75	40	1	73	145	91	165	1.50e-15	73.9
MS.gene31002.t1	AT1G72220	36.364	110	63	3	36	142	114	219	1.62e-15	73.9
MS.gene31002.t1	AT2G18650	62.500	48	18	0	99	146	125	172	1.69e-15	73.9
MS.gene31002.t1	AT1G33480	32.500	120	70	3	73	192	75	183	1.81e-15	72.8
MS.gene31002.t1	AT2G20030	40.449	89	51	2	72	159	97	184	3.22e-15	73.2
MS.gene31002.t1	AT1G28040	41.333	75	43	1	69	142	221	295	4.40e-15	72.0
MS.gene31002.t1	AT1G74410	42.466	73	41	1	73	145	150	221	4.85e-15	70.9
MS.gene31002.t1	AT1G23980	40.789	76	44	1	71	146	116	190	1.06e-14	71.6
MS.gene31002.t1	AT1G72200	41.975	81	45	1	68	146	110	190	1.13e-14	71.6
MS.gene31002.t1	AT5G10380	30.882	136	75	2	73	190	109	243	1.54e-14	70.5
MS.gene31002.t1	AT2G27940	41.429	70	39	1	73	142	115	182	2.02e-14	69.7
MS.gene31002.t1	AT5G40250	56.250	48	21	0	99	146	142	189	2.04e-14	70.9
MS.gene31002.t1	AT3G62690	50.769	65	31	1	78	142	92	155	2.36e-14	69.7
MS.gene31002.t1	AT4G33565	40.845	71	41	1	98	168	215	284	2.65e-14	70.5
MS.gene31002.t1	AT2G47560	42.424	99	54	3	71	168	78	174	3.39e-14	68.9
MS.gene31002.t1	AT4G28890	38.636	88	53	1	72	159	96	182	3.81e-14	70.1
MS.gene31002.t1	AT2G25410	43.421	76	41	1	69	142	294	369	3.93e-14	70.1
MS.gene31002.t1	AT4G15975	44.000	75	39	2	73	147	51	122	4.14e-14	68.6
MS.gene31002.t1	AT3G18930	54.167	48	22	0	99	146	155	202	5.29e-14	69.7
MS.gene31002.t1	AT3G18930	54.167	48	22	0	99	146	155	202	5.29e-14	69.7
MS.gene31002.t1	AT3G18930	54.167	48	22	0	99	146	155	202	5.29e-14	69.7
MS.gene31002.t1	AT2G35420	44.444	72	39	1	71	142	75	145	5.50e-14	68.6
MS.gene31002.t1	AT5G42200	49.057	53	27	0	90	142	94	146	5.91e-14	67.0
MS.gene31002.t1	AT4G17920	37.374	99	57	2	49	145	60	155	7.36e-14	68.6
MS.gene31002.t1	AT5G58580	43.056	72	41	0	71	142	109	180	9.66e-14	68.6
MS.gene31002.t1	AT1G32361	35.043	117	63	4	71	187	128	231	1.23e-13	68.6
MS.gene31002.t1	AT5G05810	44.286	70	32	1	99	161	145	214	1.23e-13	68.6
MS.gene31002.t1	AT2G46494	39.189	74	44	1	70	142	285	358	1.28e-13	68.6
MS.gene31002.t1	AT2G35910	38.158	76	46	1	73	148	121	195	1.29e-13	67.0
MS.gene31002.t1	AT5G07040	31.250	80	54	1	65	143	58	137	1.32e-13	65.9
MS.gene31002.t1	AT2G46493	39.189	74	44	1	70	142	107	180	1.70e-13	66.2
MS.gene31002.t1	AT2G34990	38.667	75	44	1	70	142	86	160	1.71e-13	67.8
MS.gene31002.t1	AT2G34990	38.667	75	44	1	70	142	64	138	1.80e-13	67.8
MS.gene31002.t1	AT1G22500	39.474	76	44	1	73	146	89	164	4.15e-13	67.0
MS.gene31002.t1	AT5G66070	56.522	46	20	0	100	145	176	221	5.47e-13	65.5
MS.gene31002.t1	AT5G66070	56.522	46	20	0	100	145	176	221	5.47e-13	65.5
MS.gene31002.t1	AT5G06490	31.776	107	52	2	73	173	96	187	6.10e-13	64.7
MS.gene31002.t1	AT5G66070	56.818	44	19	0	100	143	200	243	8.88e-13	65.1
MS.gene31002.t1	AT2G37580	36.905	84	46	2	59	142	108	184	1.50e-12	64.3
MS.gene31002.t1	AT4G26400	35.433	127	69	4	21	142	164	282	1.74e-12	65.1
MS.gene31002.t1	AT4G26400	35.433	127	69	4	21	142	164	282	1.74e-12	65.1
MS.gene31002.t1	AT3G19140	55.556	45	20	0	99	143	78	122	2.02e-12	62.4
MS.gene31002.t1	AT3G61550	33.094	139	73	5	34	170	79	199	2.44e-12	63.5
MS.gene31002.t1	AT5G43420	52.273	44	21	0	99	142	137	180	2.65e-12	64.7
MS.gene31002.t1	AT5G53110	35.211	71	45	1	73	142	302	372	3.10e-12	64.7
MS.gene31002.t1	AT2G46495	38.356	73	43	1	72	142	262	334	4.16e-12	63.9
MS.gene31002.t1	AT2G46495	38.356	73	43	1	72	142	290	362	4.21e-12	64.3
MS.gene31002.t1	AT2G42350	51.111	45	22	0	98	142	98	142	4.37e-12	62.8
MS.gene31002.t1	AT2G46160	35.106	94	51	2	50	143	98	181	4.79e-12	62.8
MS.gene31002.t1	AT2G46160	35.106	94	51	2	50	143	98	181	4.79e-12	62.8
MS.gene31002.t1	AT1G55530	31.783	129	76	3	18	142	144	264	6.57e-12	63.5
MS.gene31002.t1	AT1G55530	31.783	129	76	3	18	142	144	264	6.57e-12	63.5
MS.gene31002.t1	AT5G36001	55.319	47	21	0	97	143	261	307	7.24e-12	63.2
MS.gene31002.t1	AT2G17730	54.545	44	20	0	100	143	196	239	8.72e-12	62.4
MS.gene31002.t1	AT4G24015	34.091	88	55	2	55	142	63	147	9.09e-12	61.2
MS.gene31002.t1	AT2G18670	34.667	75	49	0	68	142	78	152	9.41e-12	61.2
MS.gene31002.t1	AT5G56340	39.506	81	41	2	62	142	228	300	9.57e-12	63.2
MS.gene31002.t1	AT3G11110	34.524	84	55	0	59	142	66	149	1.11e-11	60.5
MS.gene31002.t1	AT4G35840	54.545	44	20	0	100	143	191	234	1.13e-11	62.0
MS.gene31002.t1	AT1G04360	31.579	95	54	2	59	142	82	176	1.25e-11	62.8
MS.gene31002.t1	AT2G42360	40.244	82	33	2	98	178	106	172	1.75e-11	61.6
MS.gene31002.t1	AT4G11360	38.202	89	50	3	58	143	44	130	1.77e-11	60.1
MS.gene31002.t1	AT1G55530	38.095	84	44	2	59	142	156	231	2.07e-11	62.0
MS.gene31002.t1	AT5G20910	39.286	84	47	3	63	145	194	274	2.78e-11	61.6
MS.gene31002.t1	AT3G19950	37.037	81	49	2	62	142	179	257	4.66e-11	60.8
MS.gene31002.t1	AT4G11680	46.875	64	33	1	90	153	328	390	4.80e-11	61.2
MS.gene31002.t1	AT3G60220	50.000	50	25	0	99	148	116	165	5.28e-11	60.8
MS.gene31002.t1	AT3G19950	37.037	81	49	2	62	142	237	315	5.67e-11	60.8
MS.gene31002.t1	AT3G19950	37.037	81	49	2	62	142	237	315	5.67e-11	60.8
MS.gene31002.t1	AT3G47990	57.778	45	18	1	98	142	176	219	6.26e-11	60.5
MS.gene31002.t1	AT3G47990	57.778	45	18	1	98	142	176	219	6.26e-11	60.5
MS.gene31002.t1	AT3G47990	57.778	45	18	1	98	142	176	219	6.26e-11	60.5
MS.gene31002.t1	AT3G47990	57.778	45	18	1	98	142	233	276	6.32e-11	60.8
MS.gene31002.t1	AT3G47990	57.778	45	18	1	98	142	217	260	6.50e-11	60.5

Find 46 sgRNAs with CRISPR-Local

Find 52 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
GCTATAGTTACAATTGTTTC+TGG	0.173773	3.3:+79216687	None:intergenic
AATTGGAGGGTTGGCTGAAT+TGG	0.255669	3.3:+79217220	None:intergenic
TCATGGGTGCTTGTGGAAAT+TGG	0.304132	3.3:+79217203	None:intergenic
CGAGCTAAAATTGCCGAGTT+TGG	0.311578	3.3:-79216928	MS.gene31002:CDS
AAGGTTTGGTGCGTAATTAT+AGG	0.336342	3.3:-79216650	MS.gene31002:CDS
AGGTTTGGTGCGTAATTATA+GGG	0.361613	3.3:-79216649	MS.gene31002:CDS
CCAGTGTTTGCTGCTCGAAC+TGG	0.373317	3.3:+79216999	None:intergenic
TAATTACGCACCAAACCTTC+AGG	0.387225	3.3:+79216654	None:intergenic
GTTACAATTGTTTCTGGCAC+TGG	0.402596	3.3:+79216693	None:intergenic
GAGACTTGTAACAAAATTGT+TGG	0.407618	3.3:-79216756	MS.gene31002:CDS
ACCACTGGAACCTGAAGGTT+TGG	0.420010	3.3:-79216664	MS.gene31002:CDS
CATGGTTACACTTTGGCAAA+AGG	0.428793	3.3:+79216853	None:intergenic
ATAAGGCACTGTCTACATTT+CGG	0.434733	3.3:+79216780	None:intergenic
ATGTTCGTTGCATTGACAAA+TGG	0.437642	3.3:-79216824	MS.gene31002:CDS
ATGATTCTTTAGTTGAATCA+TGG	0.469396	3.3:+79217186	None:intergenic
GCTTGTGGAAATTGGAGGGT+TGG	0.479017	3.3:+79217211	None:intergenic
TTGAGAATTTCCACTCAAGA+AGG	0.489545	3.3:-79217259	MS.gene31002:CDS
AAAATTGCCGAGTTTGGACT+CGG	0.502998	3.3:-79216922	MS.gene31002:CDS
TGAAATCCATGGTTACACTT+TGG	0.509019	3.3:+79216846	None:intergenic
AATTGTAACTATAGCACCAC+TGG	0.513881	3.3:-79216679	MS.gene31002:CDS
ACTAAAGAATCATCATATGC+TGG	0.519981	3.3:-79217176	MS.gene31002:CDS
GGGTGCTTGTGGAAATTGGA+GGG	0.544668	3.3:+79217207	None:intergenic
AACAAAATTGTTGGTACACA+AGG	0.554978	3.3:-79216747	MS.gene31002:CDS
GAATCATCATATGCTGGAGA+TGG	0.558481	3.3:-79217170	MS.gene31002:intron
CCAGTTCGAGCAGCAAACAC+TGG	0.562321	3.3:-79216999	MS.gene31002:CDS
TGATTCTTTAGTTGAATCAT+GGG	0.564436	3.3:+79217187	None:intergenic
GGAAATTCTCAACAAGGTCA+TGG	0.565095	3.3:+79217270	None:intergenic
AGTTGAATCATGGGTGCTTG+TGG	0.575206	3.3:+79217196	None:intergenic
TTTGGTGCGTAATTATAGGG+AGG	0.593185	3.3:-79216646	MS.gene31002:CDS
GAAGGAGTAACCTTCTTGAG+TGG	0.605417	3.3:+79217249	None:intergenic
TGGGTGCTTGTGGAAATTGG+AGG	0.606046	3.3:+79217206	None:intergenic
TTGAGTGGAAATTCTCAACA+AGG	0.609203	3.3:+79217264	None:intergenic
ACACACTCCGAGTCCAAACT+CGG	0.610916	3.3:+79216915	None:intergenic
ACTGGAAACAACAGAGGTTG+TGG	0.617123	3.3:+79216711	None:intergenic
TGCAACGAACATGAAATCCA+TGG	0.617265	3.3:+79216835	None:intergenic
ATGGAGGAGTGGTGAAACAA+AGG	0.617601	3.3:+79217289	None:intergenic
TGGCTGAATTGGATGAGTGA+AGG	0.629963	3.3:+79217231	None:intergenic
TCAACAAGGTCATGGAGGAG+TGG	0.640993	3.3:+79217278	None:intergenic
TGTCTATCAGAGTTCACTAA+CGG	0.641662	3.3:-79216888	MS.gene31002:CDS
ATAGCACCACTGGAACCTGA+AGG	0.661578	3.3:-79216669	MS.gene31002:CDS
ACCAAACCTTCAGGTTCCAG+TGG	0.665131	3.3:+79216663	None:intergenic
CTCGTCTGAGTAAATAACTG+TGG	0.672049	3.3:+79216947	None:intergenic
TCCAATTTAGTTGTGATGAG+CGG	0.675965	3.3:-79217047	MS.gene31002:intron
TCTGGCACTGGAAACAACAG+AGG	0.691805	3.3:+79216705	None:intergenic
AATTCTCAACAAGGTCATGG+AGG	0.697875	3.3:+79217273	None:intergenic
GAGCGGTGATCATCGCTCAG+CGG	0.745866	3.3:-79217030	MS.gene31002:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!	ATGATTCTTTAGTTGAATCA+TGG	+	chr3.3:79216760-79216779	None:intergenic	25.0%
!	TGATTCTTTAGTTGAATCAT+GGG	+	chr3.3:79216759-79216778	None:intergenic	25.0%
!	TTTGTTTGAACTCAATCATA+AGG	-	chr3.3:79216858-79216877	MS.gene31002:CDS	25.0%
!!	AACAAATAAGAGCACATAAT+AGG	+	chr3.3:79216835-79216854	None:intergenic	25.0%
!!	TTTTGATGCAAATGTTGTTA+TGG	-	chr3.3:79216799-79216818	MS.gene31002:CDS	25.0%
!!	TTTTGTTACAAGTCTCAATA+AGG	+	chr3.3:79217183-79217202	None:intergenic	25.0%
	AACAAAATTGTTGGTACACA+AGG	-	chr3.3:79217196-79217215	MS.gene31002:CDS	30.0%
	ACTAAAGAATCATCATATGC+TGG	-	chr3.3:79216767-79216786	MS.gene31002:CDS	30.0%
	GAGACTTGTAACAAAATTGT+TGG	-	chr3.3:79217187-79217206	MS.gene31002:CDS	30.0%
	GCTATAGTTACAATTGTTTC+TGG	+	chr3.3:79217259-79217278	None:intergenic	30.0%
	AATTGTAACTATAGCACCAC+TGG	-	chr3.3:79217264-79217283	MS.gene31002:CDS	35.0%
	TCCAATTTAGTTGTGATGAG+CGG	-	chr3.3:79216896-79216915	MS.gene31002:CDS	35.0%
	TGAAATCCATGGTTACACTT+TGG	+	chr3.3:79217100-79217119	None:intergenic	35.0%
	TGTCTATCAGAGTTCACTAA+CGG	-	chr3.3:79217055-79217074	MS.gene31002:intron	35.0%
	TTGAGAATTTCCACTCAAGA+AGG	-	chr3.3:79216684-79216703	MS.gene31002:CDS	35.0%
	TTGAGTGGAAATTCTCAACA+AGG	+	chr3.3:79216682-79216701	None:intergenic	35.0%
!	ATGTTCGTTGCATTGACAAA+TGG	-	chr3.3:79217119-79217138	MS.gene31002:intron	35.0%
!!	AAGGTTTGGTGCGTAATTAT+AGG	-	chr3.3:79217293-79217312	MS.gene31002:CDS	35.0%
!!	AGGTTTGGTGCGTAATTATA+GGG	-	chr3.3:79217294-79217313	MS.gene31002:CDS	35.0%
!!	ATAAGGCACTGTCTACATTT+CGG	+	chr3.3:79217166-79217185	None:intergenic	35.0%
	AAAATTGCCGAGTTTGGACT+CGG	-	chr3.3:79217021-79217040	MS.gene31002:CDS	40.0%
	AATTCTCAACAAGGTCATGG+AGG	+	chr3.3:79216673-79216692	None:intergenic	40.0%
	ACCGCTCATCACAACTAAAT+TGG	+	chr3.3:79216900-79216919	None:intergenic	40.0%
	CATGGTTACACTTTGGCAAA+AGG	+	chr3.3:79217093-79217112	None:intergenic	40.0%
	CTCGTCTGAGTAAATAACTG+TGG	+	chr3.3:79216999-79217018	None:intergenic	40.0%
	GAATCATCATATGCTGGAGA+TGG	-	chr3.3:79216773-79216792	MS.gene31002:CDS	40.0%
	GGAAATTCTCAACAAGGTCA+TGG	+	chr3.3:79216676-79216695	None:intergenic	40.0%
	TAATTACGCACCAAACCTTC+AGG	+	chr3.3:79217292-79217311	None:intergenic	40.0%
	TGCAACGAACATGAAATCCA+TGG	+	chr3.3:79217111-79217130	None:intergenic	40.0%
!	CTTTTGCCAAAGTGTAACCA+TGG	-	chr3.3:79217091-79217110	MS.gene31002:intron	40.0%
!	TTTGGTGCGTAATTATAGGG+AGG	-	chr3.3:79217297-79217316	MS.gene31002:CDS	40.0%
!!	GTTACAATTGTTTCTGGCAC+TGG	+	chr3.3:79217253-79217272	None:intergenic	40.0%
	ACTGGAAACAACAGAGGTTG+TGG	+	chr3.3:79217235-79217254	None:intergenic	45.0%
	AGTTGAATCATGGGTGCTTG+TGG	+	chr3.3:79216750-79216769	None:intergenic	45.0%
	ATGGAGGAGTGGTGAAACAA+AGG	+	chr3.3:79216657-79216676	None:intergenic	45.0%
	CGAGCTAAAATTGCCGAGTT+TGG	-	chr3.3:79217015-79217034	MS.gene31002:CDS	45.0%
	GAAGGAGTAACCTTCTTGAG+TGG	+	chr3.3:79216697-79216716	None:intergenic	45.0%
	TCATGGGTGCTTGTGGAAAT+TGG	+	chr3.3:79216743-79216762	None:intergenic	45.0%
	TGGCTGAATTGGATGAGTGA+AGG	+	chr3.3:79216715-79216734	None:intergenic	45.0%
!!	AATTGGAGGGTTGGCTGAAT+TGG	+	chr3.3:79216726-79216745	None:intergenic	45.0%
	ACACACTCCGAGTCCAAACT+CGG	+	chr3.3:79217031-79217050	None:intergenic	50.0%
	ACCACTGGAACCTGAAGGTT+TGG	-	chr3.3:79217279-79217298	MS.gene31002:CDS	50.0%
	ATAGCACCACTGGAACCTGA+AGG	-	chr3.3:79217274-79217293	MS.gene31002:CDS	50.0%
	GCTTGTGGAAATTGGAGGGT+TGG	+	chr3.3:79216735-79216754	None:intergenic	50.0%
	GGGTGCTTGTGGAAATTGGA+GGG	+	chr3.3:79216739-79216758	None:intergenic	50.0%
	TCAACAAGGTCATGGAGGAG+TGG	+	chr3.3:79216668-79216687	None:intergenic	50.0%
	TGGGTGCTTGTGGAAATTGG+AGG	+	chr3.3:79216740-79216759	None:intergenic	50.0%
!	ACCAAACCTTCAGGTTCCAG+TGG	+	chr3.3:79217283-79217302	None:intergenic	50.0%
!	TCTGGCACTGGAAACAACAG+AGG	+	chr3.3:79217241-79217260	None:intergenic	50.0%
	CCAGTTCGAGCAGCAAACAC+TGG	-	chr3.3:79216944-79216963	MS.gene31002:CDS	55.0%
!	CCAGTGTTTGCTGCTCGAAC+TGG	+	chr3.3:79216947-79216966	None:intergenic	55.0%
	GAGCGGTGATCATCGCTCAG+CGG	-	chr3.3:79216913-79216932	MS.gene31002:CDS	60.0%

Chromosome	Type	Strat	End	Strand	Name
chr3.3	gene	79216638	79217327	79216638	ID=MS.gene31002
chr3.3	mRNA	79216638	79217327	79216638	ID=MS.gene31002.t1;Parent=MS.gene31002
chr3.3	exon	79217171	79217327	79217171	ID=MS.gene31002.t1.exon1;Parent=MS.gene31002.t1
chr3.3	CDS	79217171	79217327	79217171	ID=cds.MS.gene31002.t1;Parent=MS.gene31002.t1
chr3.3	exon	79216638	79217059	79216638	ID=MS.gene31002.t1.exon2;Parent=MS.gene31002.t1
chr3.3	CDS	79216638	79217059	79216638	ID=cds.MS.gene31002.t1;Parent=MS.gene31002.t1

Gene Sequence

>MS.gene31002

ATGTATGCTACTACTTCCTTTGTTTCACCACTCCTCCATGACCTTGTTGAGAATTTCCACTCAAGAAGGTTACTCCTTCACTCATCCAATTCAGCCAACCCTCCAATTTCCACAAGCACCCATGATTCAACTAAAGAATCATCATATGCTGGAGATGGTAATTTTGATGCAAATGTTGTTATGGTACTCTCTGTCCTATTATGTGCTCTTATTTGTTCACTTTGTTTGAACTCAATCATAAGGTGTGCATTAAAATGTTCCAATTTAGTTGTGATGAGCGGTGATCATCGCTCAGCGGATAACGCTCCAGTTCGAGCAGCAAACACTGGAATCAAGAAGAAAGCTCTCAAGAAATTCACCACAGTTATTTACTCAGACGAGCTAAAATTGCCGAGTTTGGACTCGGAGTGTGTGATATGTCTATCAGAGTTCACTAACGGCGATAAAGTGCGCCTTTTGCCAAAGTGTAACCATGGATTTCATGTTCGTTGCATTGACAAATGGCTAAGTTCGCATTCGTCTTGTCCGAAATGTAGACAGTGCCTTATTGAGACTTGTAACAAAATTGTTGGTACACAAGGTAGTTCATCTCAACCACAACCTCTGTTGTTTCCAGTGCCAGAAACAATTGTAACTATAGCACCACTGGAACCTGAAGGTTTGGTGCGTAATTATAGGGAGGTTAGCTAA

Protein sequence

>MS.gene31002.t1

MYATTSFVSPLLHDLVENFHSRRLLLHSSNSANPPISTSTHDSTKESSYAGDVVMSGDHRSADNAPVRAANTGIKKKALKKFTTVIYSDELKLPSLDSECVICLSEFTNGDKVRLLPKCNHGFHVRCIDKWLSSHSSCPKCRQCLIETCNKIVGTQGSSSQPQPLLFPVPETIVTIAPLEPEGLVRNYREVS