AlfalfaGEDB | MS.gene030656

M. sativa cultivar XinJiangDaYe / MS.gene030656

KEGG: K19040
GO: -
PFAM: PF13639.9

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene030656.t1	XP_003630207.1	87.3	165	11	1	1	165	63	217	8.20E-73	283.1

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene030656.t1	Q6NML0	51.5	167	75	3	1	164	60	223	7.9e-40	164.9

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene030656.t1	G7LD44	87.3	165	11	1	1	165	63	217	5.9e-73	283.1

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR

PPI:

Gene1	Gene2	Type
MS.gene030656	MS.gene030652	PPI
MS.gene030656	MS.gene030660	PPI
MS.gene030654	MS.gene030656	PPI
MS.gene58107	MS.gene030656	PPI
MS.gene030656	MS.gene28430	PPI
MS.gene030658	MS.gene030656	PPI
MS.gene76770	MS.gene030656	PPI
MS.gene030656	MS.gene030653	PPI
MS.gene030656	MS.gene030655	PPI
MS.gene58109	MS.gene030656	PPI
MS.gene030656	MS.gene28431	PPI
MS.gene013346	MS.gene030656	PPI
MS.gene030656	MS.gene58104	PPI
MS.gene030656	MS.gene70254	PPI
MS.gene28424	MS.gene030656	PPI
MS.gene70256	MS.gene030656	PPI
MS.gene030656	MS.gene28427	PPI
MS.gene030656	MS.gene70255	PPI
MS.gene030656	MS.gene58107	PPI
MS.gene030656	MS.gene58110	PPI
MS.gene030656	MS.gene58106	PPI
MS.gene030656	MS.gene013346	PPI
MS.gene70253	MS.gene030656	PPI
MS.gene030656	MS.gene70257	PPI
MS.gene48772	MS.gene030656	PPI
MS.gene030656	MS.gene030657	PPI
MS.gene030656	MS.gene030659	PPI
MS.gene030656	MS.gene94889	PPI
MS.gene58111	MS.gene030656	PPI
MS.gene28426	MS.gene030656	PPI
MS.gene06444	MS.gene030656	PPI
MS.gene58108	MS.gene030656	PPI
MS.gene28428	MS.gene030656	PPI
MS.gene28429	MS.gene030656	PPI
MS.gene030656	MS.gene28425	PPI
MS.gene030656	MS.gene88015	PPI
MS.gene030656	MS.gene70250	PPI
MS.gene70249	MS.gene030656	PPI
MS.gene030659	MS.gene030656	PPI
MS.gene58105	MS.gene030656	PPI
MS.gene030656	MS.gene030651	PPI
MS.gene049319	MS.gene030656	PPI
MS.gene030656	MS.gene31002	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene030656.t1	MTR_8g092970	89.091	165	8	1	1	165	63	217	6.06e-96	276
MS.gene030656.t1	MTR_8g092930	85.455	165	22	1	1	165	63	225	1.87e-89	260
MS.gene030656.t1	MTR_8g093010	81.212	165	21	3	1	165	65	219	2.29e-88	257
MS.gene030656.t1	MTR_8g092840	81.707	164	29	1	1	164	63	225	4.68e-85	249
MS.gene030656.t1	MTR_8g092960	76.829	164	34	1	1	164	56	215	2.58e-80	237
MS.gene030656.t1	MTR_8g092990	84.242	165	25	1	1	165	64	227	4.08e-80	237
MS.gene030656.t1	MTR_8g092985	83.444	151	21	1	1	151	64	210	9.27e-80	235
MS.gene030656.t1	MTR_3g095560	68.824	170	45	2	1	165	61	227	2.36e-79	235
MS.gene030656.t1	MTR_3g094000	50.000	138	60	3	1	136	46	176	1.30e-39	132
MS.gene030656.t1	MTR_7g073200	50.000	126	54	3	1	125	36	153	2.24e-34	119
MS.gene030656.t1	MTR_5g024730	44.156	154	66	5	1	145	35	177	3.96e-34	119
MS.gene030656.t1	MTR_3g116000	46.667	135	64	4	1	133	31	159	1.32e-33	117
MS.gene030656.t1	MTR_8g073120	44.526	137	59	5	1	132	28	152	1.77e-30	110
MS.gene030656.t1	MTR_2g035800	40.984	122	65	2	1	122	31	145	4.28e-29	105
MS.gene030656.t1	MTR_4g094725	43.089	123	63	2	1	122	33	149	4.93e-29	104
MS.gene030656.t1	MTR_1g043410	30.675	163	99	5	1	154	37	194	1.02e-21	89.7
MS.gene030656.t1	MTR_3g110190	43.299	97	51	2	34	127	45	140	2.75e-20	85.9
MS.gene030656.t1	MTR_4g120270	45.205	73	37	1	49	121	77	146	1.04e-19	83.6
MS.gene030656.t1	MTR_8g023400	36.522	115	66	3	52	161	92	204	2.03e-19	83.2
MS.gene030656.t1	MTR_7g117540	46.667	75	38	1	53	127	77	149	5.24e-19	81.6
MS.gene030656.t1	MTR_3g071300	34.646	127	76	2	1	124	29	151	6.77e-19	79.3
MS.gene030656.t1	MTR_1g100737	44.578	83	42	1	50	128	90	172	1.02e-18	79.3
MS.gene030656.t1	MTR_1g082550	35.938	128	73	4	2	125	51	173	1.30e-18	81.6
MS.gene030656.t1	MTR_5g064980	36.923	130	71	4	1	124	58	182	1.78e-18	81.3
MS.gene030656.t1	MTR_6g055030	42.529	87	48	1	40	124	85	171	3.24e-18	80.1
MS.gene030656.t1	MTR_3g099650	42.308	78	43	1	50	125	105	182	3.95e-18	80.5
MS.gene030656.t1	MTR_7g113800	42.105	95	45	3	40	125	73	166	4.89e-18	80.1
MS.gene030656.t1	MTR_2g096350	62.500	48	18	0	74	121	130	177	5.72e-18	77.8
MS.gene030656.t1	MTR_5g064990	35.652	115	69	3	50	159	112	226	7.47e-18	79.7
MS.gene030656.t1	MTR_6g087150	50.704	71	34	1	52	122	93	162	1.15e-17	79.0
MS.gene030656.t1	MTR_4g129420	41.772	79	46	0	47	125	112	190	1.29e-17	79.3
MS.gene030656.t1	MTR_2g436100	45.205	73	39	1	49	121	90	161	1.47e-17	77.8
MS.gene030656.t1	MTR_4g063070	40.741	81	47	1	42	121	298	378	1.49e-17	79.0
MS.gene030656.t1	MTR_3g464780	40.404	99	49	2	30	125	87	178	2.16e-17	77.0
MS.gene030656.t1	MTR_7g116220	40.000	80	46	1	49	126	67	146	3.42e-17	75.1
MS.gene030656.t1	MTR_2g055790	33.333	123	72	2	3	125	34	146	4.30e-17	75.1
MS.gene030656.t1	MTR_1g492830	40.789	76	45	0	51	126	60	135	4.40e-17	75.5
MS.gene030656.t1	MTR_3g078450	35.398	113	70	2	29	140	53	163	5.66e-17	75.1
MS.gene030656.t1	MTR_4g030070	36.364	88	54	1	42	129	75	160	7.11e-17	75.1
MS.gene030656.t1	MTR_5g082940	43.421	76	42	1	50	124	73	148	7.36e-17	73.9
MS.gene030656.t1	MTR_5g066250	35.135	111	59	2	50	160	132	229	8.76e-17	76.6
MS.gene030656.t1	MTR_7g108855	38.043	92	48	2	53	135	67	158	1.13e-16	73.9
MS.gene030656.t1	MTR_5g071930	42.553	94	48	3	51	144	65	152	1.72e-16	73.6
MS.gene030656.t1	MTR_3g100400	44.444	72	39	1	50	121	128	198	1.79e-16	75.9
MS.gene030656.t1	MTR_5g064890	31.034	116	78	2	11	125	86	200	2.84e-16	75.1
MS.gene030656.t1	MTR_8g066780	32.317	164	101	6	2	157	62	223	3.26e-16	74.7
MS.gene030656.t1	MTR_7g076250	40.278	72	43	0	50	121	61	132	5.10e-16	72.0
MS.gene030656.t1	MTR_3g086700	41.250	80	45	1	47	124	41	120	5.12e-16	72.0
MS.gene030656.t1	MTR_4g093830	34.259	108	60	2	52	159	126	222	6.47e-16	73.9
MS.gene030656.t1	MTR_8g074900	33.058	121	67	3	11	124	112	225	8.23e-16	72.4
MS.gene030656.t1	MTR_1g070140	39.506	81	47	2	45	124	96	175	8.46e-16	73.6
MS.gene030656.t1	MTR_8g089880	38.750	80	48	1	52	131	127	205	1.00e-15	72.8
MS.gene030656.t1	MTR_5g026730	38.000	100	57	3	51	146	62	160	1.06e-15	70.9
MS.gene030656.t1	MTR_3g086730	41.250	80	45	1	47	124	41	120	1.10e-15	72.0
MS.gene030656.t1	MTR_5g030010	31.967	122	75	2	47	161	117	237	1.76e-15	72.8
MS.gene030656.t1	MTR_3g114500	32.231	121	74	3	1	121	1	113	1.85e-15	68.9
MS.gene030656.t1	MTR_3g078470	35.000	100	62	2	26	124	52	149	2.28e-15	70.9
MS.gene030656.t1	MTR_4g056590	37.079	89	49	3	49	137	97	178	2.58e-15	70.5
MS.gene030656.t1	MTR_1g074190	37.363	91	52	1	44	129	91	181	3.05e-15	72.0
MS.gene030656.t1	MTR_2g009310	61.364	44	17	0	78	121	160	203	4.11e-15	72.0
MS.gene030656.t1	MTR_5g034790	42.500	80	41	2	48	125	112	188	6.84e-15	71.2
MS.gene030656.t1	MTR_5g009190	39.024	82	49	1	42	122	256	337	9.24e-15	70.9
MS.gene030656.t1	MTR_5g009210	40.000	80	47	1	43	121	278	357	1.19e-14	70.5
MS.gene030656.t1	MTR_8g099495	39.744	78	46	1	46	122	313	390	1.21e-14	70.5
MS.gene030656.t1	MTR_2g090950	38.462	78	43	1	49	121	88	165	1.24e-14	69.3
MS.gene030656.t1	MTR_6g007737	30.827	133	82	3	1	124	73	204	1.40e-14	70.5
MS.gene030656.t1	MTR_7g116180	40.260	77	42	2	51	124	66	141	1.58e-14	67.8
MS.gene030656.t1	MTR_5g022920	39.474	76	45	1	50	124	159	234	1.89e-14	68.6
MS.gene030656.t1	MTR_8g032690	40.580	69	38	1	79	147	19	84	1.91e-14	65.9
MS.gene030656.t1	MTR_8g063660	39.241	79	47	1	48	126	64	141	1.99e-14	69.7
MS.gene030656.t1	MTR_2g090905	33.981	103	51	2	50	147	37	127	2.55e-14	66.2
MS.gene030656.t1	MTR_1g070425	40.260	77	42	2	51	124	67	142	3.29e-14	67.0
MS.gene030656.t1	MTR_6g007680	43.662	71	39	1	51	121	39	108	3.81e-14	66.2
MS.gene030656.t1	MTR_5g076990	44.872	78	40	1	50	124	74	151	4.42e-14	68.6
MS.gene030656.t1	MTR_8g028465	41.429	70	38	1	52	121	90	156	4.52e-14	67.0
MS.gene030656.t1	MTR_1g056350	32.990	97	61	2	47	140	69	164	5.46e-14	66.2
MS.gene030656.t1	MTR_4g106680	38.667	75	45	1	47	121	101	174	6.54e-14	68.2
MS.gene030656.t1	MTR_1g026070	36.486	74	43	1	48	121	44	113	7.43e-14	65.1
MS.gene030656.t1	MTR_6g007670	40.260	77	41	2	48	121	1	75	1.02e-13	67.0
MS.gene030656.t1	MTR_6g007670	48.611	72	35	2	51	121	144	214	7.83e-13	64.7
MS.gene030656.t1	MTR_5g026720	55.814	43	19	0	79	121	93	135	1.06e-13	65.5
MS.gene030656.t1	MTR_3g091620	31.200	125	69	4	49	161	98	217	1.15e-13	67.8
MS.gene030656.t1	MTR_5g009200	33.663	101	66	1	22	121	292	392	1.22e-13	67.8
MS.gene030656.t1	MTR_7g079290	32.941	85	52	2	51	131	124	207	1.48e-13	65.9
MS.gene030656.t1	MTR_2g041200	45.161	62	34	0	60	121	90	151	1.72e-13	65.1
MS.gene030656.t1	MTR_5g092790	43.836	73	38	2	51	121	156	227	2.31e-13	65.9
MS.gene030656.t1	MTR_8g099515	44.444	72	37	2	52	121	309	379	2.68e-13	66.6
MS.gene030656.t1	MTR_4g108830	35.000	100	60	3	24	122	122	217	4.18e-13	64.7
MS.gene030656.t1	MTR_3g012550	24.675	154	102	3	1	153	32	172	4.75e-13	63.9
MS.gene030656.t1	MTR_8g071815	53.333	45	21	0	77	121	88	132	6.23e-13	63.5
MS.gene030656.t1	MTR_3g087900	38.554	83	46	3	44	125	37	115	8.00e-13	62.8
MS.gene030656.t1	MTR_7g079280	36.364	77	48	1	52	127	80	156	8.20e-13	63.5
MS.gene030656.t1	MTR_7g059360	44.068	59	33	0	66	124	145	203	8.31e-13	64.3
MS.gene030656.t1	MTR_3g078120	33.333	123	79	3	2	121	5	127	1.66e-12	62.0
MS.gene030656.t1	MTR_8g066740	41.558	77	42	1	51	124	75	151	1.78e-12	63.9
MS.gene030656.t1	MTR_4g108830	35.556	90	54	2	34	122	103	189	1.82e-12	62.8
MS.gene030656.t1	MTR_3g091200	38.028	71	43	1	52	121	303	373	1.96e-12	64.3
MS.gene030656.t1	MTR_5g092750	42.308	78	42	2	51	126	156	232	1.96e-12	63.2
MS.gene030656.t1	MTR_5g026260	44.776	67	35	2	56	121	482	547	2.47e-12	64.3
MS.gene030656.t1	MTR_1g090480	32.000	125	77	3	9	127	28	150	2.63e-12	61.6
MS.gene030656.t1	MTR_4g116460	53.333	45	19	2	78	121	440	483	3.74e-12	63.5
MS.gene030656.t1	MTR_4g116460	53.333	45	19	2	78	121	483	526	3.89e-12	63.5
MS.gene030656.t1	MTR_7g116200	38.028	71	42	1	51	121	67	135	7.46e-12	60.8
MS.gene030656.t1	MTR_6g055030	54.545	44	20	0	81	124	97	140	9.69e-12	62.0
MS.gene030656.t1	MTR_3g081030	32.673	101	64	2	31	131	75	171	1.11e-11	60.8
MS.gene030656.t1	MTR_7g096690	31.250	80	52	1	45	121	63	142	1.71e-11	61.2
MS.gene030656.t1	MTR_2g079320	36.250	80	46	1	50	124	125	204	2.92e-11	59.7
MS.gene030656.t1	MTR_3g078540	41.270	63	36	1	66	127	66	128	3.19e-11	58.5
MS.gene030656.t1	MTR_4g022410	45.763	59	32	0	78	136	112	170	3.25e-11	59.3
MS.gene030656.t1	MTR_8g019710	54.545	44	20	0	78	121	53	96	3.41e-11	58.2
MS.gene030656.t1	MTR_2g044570	42.593	54	31	0	78	131	82	135	4.01e-11	60.1
MS.gene030656.t1	MTR_8g009190	38.889	72	42	1	56	125	80	151	4.50e-11	60.1
MS.gene030656.t1	MTR_7g117350	34.211	76	45	1	52	122	282	357	5.25e-11	60.1
MS.gene030656.t1	MTR_7g117350	34.211	76	45	1	52	122	290	365	5.26e-11	60.1
MS.gene030656.t1	MTR_8g027980	33.333	75	48	1	55	127	93	167	7.68e-11	59.3
MS.gene030656.t1	MTR_3g078520	31.461	89	61	0	33	121	57	145	9.05e-11	57.8

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene030656.t1	AT1G49230	53.892	167	68	2	1	163	58	219	4.38e-57	178
MS.gene030656.t1	AT1G49220	56.790	162	62	4	1	158	60	217	1.00e-56	178
MS.gene030656.t1	AT1G49200	52.976	168	71	4	1	164	61	224	6.50e-54	170
MS.gene030656.t1	AT1G49210	52.695	167	73	2	1	164	60	223	2.38e-53	169
MS.gene030656.t1	AT3G18773	50.299	167	78	3	1	164	54	218	3.83e-52	166
MS.gene030656.t1	AT5G05280	51.852	135	57	2	1	135	43	169	1.15e-42	140
MS.gene030656.t1	AT3G10910	49.606	127	61	3	1	125	35	160	4.52e-37	126
MS.gene030656.t1	AT1G20823	48.062	129	60	3	1	125	32	157	5.52e-35	121
MS.gene030656.t1	AT1G76410	42.767	159	86	2	1	158	30	184	3.87e-34	119
MS.gene030656.t1	AT5G01880	46.667	120	51	4	17	135	52	159	1.93e-29	106
MS.gene030656.t1	AT2G17450	39.231	130	61	2	1	124	30	147	7.99e-27	100
MS.gene030656.t1	AT4G17245	41.803	122	55	2	1	121	39	145	1.46e-26	99.0
MS.gene030656.t1	AT5G47610	34.559	136	76	1	1	136	42	164	1.86e-25	95.9
MS.gene030656.t1	AT4G35480	38.095	147	69	5	1	132	28	167	5.19e-24	93.2
MS.gene030656.t1	AT4G40070	34.810	158	92	4	2	154	49	200	1.70e-21	89.0
MS.gene030656.t1	AT3G05200	31.551	187	96	5	1	160	51	232	2.53e-21	89.4
MS.gene030656.t1	AT1G72200	34.416	154	79	5	1	151	67	201	6.80e-20	85.5
MS.gene030656.t1	AT4G09120	36.508	126	69	3	2	124	51	168	9.73e-19	81.6
MS.gene030656.t1	AT1G72310	48.718	78	38	1	48	125	98	173	1.40e-18	81.3
MS.gene030656.t1	AT3G16720	36.697	109	62	4	48	152	90	195	2.33e-18	80.5
MS.gene030656.t1	AT1G53820	40.860	93	50	3	48	138	91	180	3.30e-18	80.1
MS.gene030656.t1	AT4G15975	38.462	91	54	1	34	124	33	121	5.67e-18	78.2
MS.gene030656.t1	AT3G14320	47.887	71	35	1	52	122	63	131	7.72e-18	77.4
MS.gene030656.t1	AT1G35330	31.783	129	82	3	2	124	46	174	8.17e-18	79.0
MS.gene030656.t1	AT4G09110	34.400	125	73	3	2	124	51	168	1.05e-17	78.6
MS.gene030656.t1	AT2G20030	48.571	70	35	1	52	121	98	166	1.31e-17	79.0
MS.gene030656.t1	AT5G27420	45.000	80	42	1	49	126	92	171	3.18e-17	77.8
MS.gene030656.t1	AT4G09130	46.154	78	40	1	49	124	88	165	3.82e-17	77.4
MS.gene030656.t1	AT4G17905	34.815	135	71	4	2	121	65	197	4.13e-17	77.0
MS.gene030656.t1	AT2G35000	40.741	81	46	1	47	125	101	181	4.68e-17	77.4
MS.gene030656.t1	AT4G17905	34.815	135	71	4	2	121	91	223	5.83e-17	77.0
MS.gene030656.t1	AT3G03550	60.000	50	20	0	78	127	158	207	7.19e-17	76.6
MS.gene030656.t1	AT2G18650	43.590	78	44	0	48	125	95	172	7.52e-17	77.0
MS.gene030656.t1	AT5G05810	45.833	72	38	1	50	121	118	188	7.61e-17	77.0
MS.gene030656.t1	AT4G17920	31.538	130	83	3	1	124	26	155	8.54e-17	75.9
MS.gene030656.t1	AT4G28890	45.070	71	38	1	52	122	97	166	8.72e-17	77.0
MS.gene030656.t1	AT4G30400	41.333	75	44	0	47	121	102	176	1.09e-16	76.6
MS.gene030656.t1	AT5G57750	29.839	124	85	1	1	122	42	165	1.10e-16	74.3
MS.gene030656.t1	AT1G23980	34.307	137	76	5	1	125	56	190	1.25e-16	76.3
MS.gene030656.t1	AT1G74410	38.462	91	55	1	34	124	132	221	2.10e-16	73.9
MS.gene030656.t1	AT2G46494	32.000	125	80	2	2	121	234	358	2.13e-16	75.5
MS.gene030656.t1	AT1G28040	36.449	107	60	3	23	121	189	295	2.35e-16	74.7
MS.gene030656.t1	AT1G04360	31.783	129	79	2	2	121	48	176	2.37e-16	75.5
MS.gene030656.t1	AT4G10160	32.000	125	80	2	1	125	24	143	2.43e-16	73.6
MS.gene030656.t1	AT5G17600	46.575	73	36	2	50	121	114	184	2.44e-16	75.5
MS.gene030656.t1	AT3G62690	37.500	104	53	3	53	154	88	181	3.08e-16	73.9
MS.gene030656.t1	AT4G09100	39.241	79	46	2	45	121	49	127	3.96e-16	70.9
MS.gene030656.t1	AT1G22500	33.858	127	79	2	1	125	41	164	5.05e-16	74.3
MS.gene030656.t1	AT2G27940	34.483	87	55	1	46	132	109	193	7.54e-16	72.4
MS.gene030656.t1	AT2G25410	34.783	115	71	2	9	121	257	369	9.89e-16	73.6
MS.gene030656.t1	AT2G47560	38.333	120	71	2	3	121	33	150	1.05e-15	72.0
MS.gene030656.t1	AT3G19140	37.143	105	61	2	18	122	23	122	1.30e-15	70.1
MS.gene030656.t1	AT5G66070	36.275	102	57	3	28	124	147	245	1.56e-15	72.0
MS.gene030656.t1	AT1G72220	28.667	150	93	4	2	138	92	240	2.04e-15	72.8
MS.gene030656.t1	AT5G66070	42.105	76	41	2	49	124	149	221	2.29e-15	70.9
MS.gene030656.t1	AT5G66070	42.105	76	41	2	49	124	149	221	2.29e-15	70.9
MS.gene030656.t1	AT1G32361	37.500	104	60	3	21	124	101	199	2.33e-15	72.4
MS.gene030656.t1	AT2G34990	39.726	73	42	1	51	121	88	160	3.27e-15	72.0
MS.gene030656.t1	AT2G34990	39.726	73	42	1	51	121	66	138	3.30e-15	71.6
MS.gene030656.t1	AT5G43420	30.496	141	76	3	2	121	41	180	4.24e-15	72.0
MS.gene030656.t1	AT3G48030	37.778	90	44	3	44	124	88	174	5.90e-15	70.5
MS.gene030656.t1	AT2G46493	40.000	75	44	1	48	121	106	180	6.12e-15	69.3
MS.gene030656.t1	AT5G06490	34.286	105	61	2	25	121	67	171	7.23e-15	69.3
MS.gene030656.t1	AT3G48030	37.778	90	44	3	44	124	166	252	9.62e-15	70.9
MS.gene030656.t1	AT1G35630	37.000	100	61	2	55	153	209	307	1.05e-14	70.5
MS.gene030656.t1	AT5G42200	39.189	74	44	1	48	121	74	146	1.26e-14	67.8
MS.gene030656.t1	AT2G35910	37.079	89	55	1	52	140	121	208	1.43e-14	68.9
MS.gene030656.t1	AT4G33565	44.286	70	37	1	78	145	216	285	1.47e-14	70.5
MS.gene030656.t1	AT1G35625	27.152	151	103	3	4	153	163	307	1.55e-14	70.1
MS.gene030656.t1	AT4G10150	36.145	83	51	1	43	125	77	157	1.59e-14	68.9
MS.gene030656.t1	AT5G53110	34.426	122	72	4	1	121	258	372	2.83e-14	69.7
MS.gene030656.t1	AT2G46495	40.789	76	43	1	48	121	287	362	3.54e-14	69.3
MS.gene030656.t1	AT2G46160	37.349	83	45	1	52	127	104	186	3.70e-14	67.8
MS.gene030656.t1	AT2G46160	37.349	83	45	1	52	127	104	186	3.70e-14	67.8
MS.gene030656.t1	AT2G46495	40.789	76	43	1	48	121	259	334	3.85e-14	68.9
MS.gene030656.t1	AT1G33480	31.532	111	71	3	43	152	66	172	4.81e-14	68.2
MS.gene030656.t1	AT2G35420	40.278	72	42	1	50	121	75	145	5.53e-14	67.8
MS.gene030656.t1	AT2G34000	32.520	123	78	2	5	122	12	134	7.13e-14	65.5
MS.gene030656.t1	AT5G10380	56.250	48	21	0	78	125	134	181	8.06e-14	67.8
MS.gene030656.t1	AT2G17730	30.000	110	68	2	15	122	137	239	8.35e-14	67.0
MS.gene030656.t1	AT4G35840	35.052	97	58	2	30	124	143	236	8.35e-14	67.0
MS.gene030656.t1	AT3G18930	37.209	86	45	2	52	128	120	205	8.92e-14	68.2
MS.gene030656.t1	AT3G18930	37.209	86	45	2	52	128	120	205	8.92e-14	68.2
MS.gene030656.t1	AT3G18930	37.209	86	45	2	52	128	120	205	8.92e-14	68.2
MS.gene030656.t1	AT5G58580	40.789	76	45	0	50	125	109	184	1.08e-13	67.4
MS.gene030656.t1	AT5G40250	51.020	49	24	0	77	125	141	189	1.82e-13	67.4
MS.gene030656.t1	AT3G61550	30.894	123	64	3	35	147	87	198	2.14e-13	65.5
MS.gene030656.t1	AT5G07040	34.667	75	48	1	49	122	63	137	2.90e-13	64.3
MS.gene030656.t1	AT2G18670	34.667	75	49	0	47	121	78	152	6.43e-13	63.5
MS.gene030656.t1	AT2G42360	37.333	75	47	0	47	121	76	150	1.11e-12	63.9
MS.gene030656.t1	AT5G46650	28.571	133	86	3	1	124	28	160	1.47e-12	64.3
MS.gene030656.t1	AT2G37580	37.179	78	44	1	44	121	112	184	1.87e-12	63.5
MS.gene030656.t1	AT5G36001	57.447	47	20	0	76	122	261	307	1.93e-12	63.9
MS.gene030656.t1	AT4G26400	45.588	68	29	2	54	121	223	282	1.93e-12	64.3
MS.gene030656.t1	AT4G26400	45.588	68	29	2	54	121	223	282	1.93e-12	64.3
MS.gene030656.t1	AT3G11110	37.349	83	52	0	39	121	67	149	2.87e-12	61.6
MS.gene030656.t1	AT3G20395	35.165	91	56	1	34	124	129	216	8.81e-12	61.2
MS.gene030656.t1	AT1G53010	50.000	50	25	0	78	127	129	178	1.11e-11	60.5
MS.gene030656.t1	AT5G52150	37.374	99	52	4	23	114	103	198	2.27e-11	60.1
MS.gene030656.t1	AT1G71980	31.111	90	60	2	52	140	205	293	3.22e-11	60.8
MS.gene030656.t1	AT2G42350	38.028	71	42	1	51	121	74	142	3.81e-11	59.7
MS.gene030656.t1	AT1G22670	30.303	99	65	3	43	140	198	293	4.55e-11	60.5
MS.gene030656.t1	AT3G47990	56.818	44	18	1	78	121	234	276	8.38e-11	59.7
MS.gene030656.t1	AT3G47990	56.818	44	18	1	78	121	218	260	9.11e-11	59.3
MS.gene030656.t1	AT3G47990	56.818	44	18	1	78	121	177	219	9.79e-11	59.3
MS.gene030656.t1	AT3G47990	56.818	44	18	1	78	121	177	219	9.79e-11	59.3
MS.gene030656.t1	AT3G47990	56.818	44	18	1	78	121	177	219	9.79e-11	59.3

Find 35 sgRNAs with CRISPR-Local

Find 36 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TGAAATCCATGGTTGCATTT+AGG	0.236983	4.3:+8632970	None:intergenic
TTGCATTAAACTCCATTATA+AGG	0.292690	4.3:-8633215	MS.gene030656:CDS
ACCACTAGAACCTGAAGATT+TGG	0.300487	4.3:-8632803	MS.gene030656:CDS
CATTATAAGGTGTGCCTTAA+GGG	0.301317	4.3:-8633202	MS.gene030656:CDS
TGAATCGTTATAATAGTTTC+TGG	0.311667	4.3:+8632826	None:intergenic
CGAAGAGTCGTTGTTGTTGA+TGG	0.313102	4.3:+8633167	None:intergenic
CCATTATAAGGTGTGCCTTA+AGG	0.325361	4.3:-8633203	MS.gene030656:CDS
AGCAAATAAAAGCACATAAT+AGG	0.335356	4.3:+8633241	None:intergenic
TAGTTACGCTCCAAATCTTC+AGG	0.356200	4.3:+8632793	None:intergenic
CTTGAAACTTGTCGGAAGAT+TGG	0.358710	4.3:-8632883	MS.gene030656:CDS
CAACAACAATTCACCTCAAT+TGG	0.361517	4.3:-8633133	MS.gene030656:CDS
CCTTAAGGCACACCTTATAA+TGG	0.373664	4.3:+8633203	None:intergenic
AAGATTTGGAGCGTAACTAT+AGG	0.385286	4.3:-8632789	MS.gene030656:CDS
TCTGGCACTGGCAACACAAT+TGG	0.406141	4.3:+8632844	None:intergenic
ATTCCTTTGTTAACCAATTG+AGG	0.408600	4.3:+8633120	None:intergenic
ATGTTCGTTGCATTGACAAA+TGG	0.437642	4.3:-8632948	MS.gene030656:CDS
AGATTTGGAGCGTAACTATA+GGG	0.450405	4.3:-8632788	MS.gene030656:CDS
AATGCCTTCTTGAAACTTGT+CGG	0.456546	4.3:-8632891	MS.gene030656:CDS
GTTATAATAGTTTCTGGCAC+TGG	0.477505	4.3:+8632832	None:intergenic
CAGCTGAATAACTCACTGTT+GGG	0.480794	4.3:+8633073	None:intergenic
TTGCATTGACAAATGGCTAA+AGG	0.492896	4.3:-8632941	MS.gene030656:CDS
AAGAAGGCATTGTCTACACT+TGG	0.501939	4.3:+8632903	None:intergenic
GGCTACGTTTGAAACCCTTA+AGG	0.504858	4.3:+8633188	None:intergenic
TCGGAAGATTGGTGGGTCGC+AGG	0.513588	4.3:-8632872	MS.gene030656:CDS
GAAACTTGTCGGAAGATTGG+TGG	0.516541	4.3:-8632880	MS.gene030656:CDS
TCAGCTGAATAACTCACTGT+TGG	0.529659	4.3:+8633072	None:intergenic
AAACTTGTCGGAAGATTGGT+GGG	0.571944	4.3:-8632879	MS.gene030656:CDS
TCTTCCGACAAGTTTCAAGA+AGG	0.582332	4.3:+8632887	None:intergenic
TGTCTCTCAGAGTTCACAAA+GGG	0.586259	4.3:-8633012	MS.gene030656:CDS
TCCAAATCTTCAGGTTCTAG+TGG	0.587103	4.3:+8632802	None:intergenic
TCACCTCAATTGGTTAACAA+AGG	0.589480	4.3:-8633123	MS.gene030656:CDS
ATACACTCTATATCTAGACT+TGG	0.610683	4.3:+8633039	None:intergenic
TGCAACGAACATGAAATCCA+TGG	0.629921	4.3:+8632959	None:intergenic
AGAAGGCATTGTCTACACTT+GGG	0.633040	4.3:+8632904	None:intergenic
ATGTCTCTCAGAGTTCACAA+AGG	0.686490	4.3:-8633013	MS.gene030656:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!	TGAATCGTTATAATAGTTTC+TGG	+	chr4.3:8633212-8633231	None:intergenic	25.0%
!	TTGCATTAAACTCCATTATA+AGG	-	chr4.3:8632820-8632839	MS.gene030656:CDS	25.0%
!!	AGCAAATAAAAGCACATAAT+AGG	+	chr4.3:8632797-8632816	None:intergenic	25.0%
	ATACACTCTATATCTAGACT+TGG	+	chr4.3:8632999-8633018	None:intergenic	30.0%
	ATTCCTTTGTTAACCAATTG+AGG	+	chr4.3:8632918-8632937	None:intergenic	30.0%
!	ATTTTACCTAAATGCAACCA+TGG	-	chr4.3:8633059-8633078	MS.gene030656:CDS	30.0%
	AATGCCTTCTTGAAACTTGT+CGG	-	chr4.3:8633144-8633163	MS.gene030656:CDS	35.0%
	CAACAACAATTCACCTCAAT+TGG	-	chr4.3:8632902-8632921	MS.gene030656:CDS	35.0%
	CATTATAAGGTGTGCCTTAA+GGG	-	chr4.3:8632833-8632852	MS.gene030656:CDS	35.0%
	TCACCTCAATTGGTTAACAA+AGG	-	chr4.3:8632912-8632931	MS.gene030656:CDS	35.0%
	TGAAATCCATGGTTGCATTT+AGG	+	chr4.3:8633068-8633087	None:intergenic	35.0%
!	AAGATTTGGAGCGTAACTAT+AGG	-	chr4.3:8633246-8633265	MS.gene030656:CDS	35.0%
!	AGATTTGGAGCGTAACTATA+GGG	-	chr4.3:8633247-8633266	MS.gene030656:CDS	35.0%
!	ATGTTCGTTGCATTGACAAA+TGG	-	chr4.3:8633087-8633106	MS.gene030656:CDS	35.0%
!	TTGCATTGACAAATGGCTAA+AGG	-	chr4.3:8633094-8633113	MS.gene030656:CDS	35.0%
!!	GTTATAATAGTTTCTGGCAC+TGG	+	chr4.3:8633206-8633225	None:intergenic	35.0%
	AAACTTGTCGGAAGATTGGT+GGG	-	chr4.3:8633156-8633175	MS.gene030656:CDS	40.0%
	ACCACTAGAACCTGAAGATT+TGG	-	chr4.3:8633232-8633251	MS.gene030656:CDS	40.0%
	ATGTCTCTCAGAGTTCACAA+AGG	-	chr4.3:8633022-8633041	MS.gene030656:CDS	40.0%
	CAGCTGAATAACTCACTGTT+GGG	+	chr4.3:8632965-8632984	None:intergenic	40.0%
	CCATTATAAGGTGTGCCTTA+AGG	-	chr4.3:8632832-8632851	MS.gene030656:CDS	40.0%
	CCTTAAGGCACACCTTATAA+TGG	+	chr4.3:8632835-8632854	None:intergenic	40.0%
	CTTGAAACTTGTCGGAAGAT+TGG	-	chr4.3:8633152-8633171	MS.gene030656:CDS	40.0%
	TAGTTACGCTCCAAATCTTC+AGG	+	chr4.3:8633245-8633264	None:intergenic	40.0%
	TCAGCTGAATAACTCACTGT+TGG	+	chr4.3:8632966-8632985	None:intergenic	40.0%
	TCTTCCGACAAGTTTCAAGA+AGG	+	chr4.3:8633151-8633170	None:intergenic	40.0%
	TGCAACGAACATGAAATCCA+TGG	+	chr4.3:8633079-8633098	None:intergenic	40.0%
	TGTCTCTCAGAGTTCACAAA+GGG	-	chr4.3:8633023-8633042	MS.gene030656:CDS	40.0%
!	TCCAAATCTTCAGGTTCTAG+TGG	+	chr4.3:8633236-8633255	None:intergenic	40.0%
!!	AAGAAGGCATTGTCTACACT+TGG	+	chr4.3:8633135-8633154	None:intergenic	40.0%
!!	AGAAGGCATTGTCTACACTT+GGG	+	chr4.3:8633134-8633153	None:intergenic	40.0%
	GAAACTTGTCGGAAGATTGG+TGG	-	chr4.3:8633155-8633174	MS.gene030656:CDS	45.0%
!	CGAAGAGTCGTTGTTGTTGA+TGG	+	chr4.3:8632871-8632890	None:intergenic	45.0%
!	GGCTACGTTTGAAACCCTTA+AGG	+	chr4.3:8632850-8632869	None:intergenic	45.0%
!!	TCTGGCACTGGCAACACAAT+TGG	+	chr4.3:8633194-8633213	None:intergenic	50.0%
!	TCGGAAGATTGGTGGGTCGC+AGG	-	chr4.3:8633163-8633182	MS.gene030656:CDS	60.0%

Chromosome	Type	Strat	End	Strand	Name
chr4.3	gene	8632780	8633277	8632780	ID=MS.gene030656
chr4.3	mRNA	8632780	8633277	8632780	ID=MS.gene030656.t1;Parent=MS.gene030656
chr4.3	exon	8632780	8633277	8632780	ID=MS.gene030656.t1.exon1;Parent=MS.gene030656.t1
chr4.3	CDS	8632780	8633277	8632780	ID=cds.MS.gene030656.t1;Parent=MS.gene030656.t1

Gene Sequence

>MS.gene030656

ATGATAGTTGCTGTCCTATTATGTGCTTTTATTTGCTCACTTGCATTAAACTCCATTATAAGGTGTGCCTTAAGGGTTTCAAACGTAGCCATCAACAACAACGACTCTTCGTTGAGTTCGAGCAACAACAATTCACCTCAATTGGTTAACAAAGGAATCAAGAAGAAAGTTCTCAAGAAATTCCCAACAGTGAGTTATTCAGCTGAGTTGAAGCTACCAAGTCTAGATATAGAGTGTATGATATGTCTCTCAGAGTTCACAAAGGGTGAAAAATTGCGCATTTTACCTAAATGCAACCATGGATTTCATGTTCGTTGCATTGACAAATGGCTAAAGGAACACTCATCATGTCCCAAGTGTAGACAATGCCTTCTTGAAACTTGTCGGAAGATTGGTGGGTCGCAGGTGCAACCAATTGTGTTGCCAGTGCCAGAAACTATTATAACGATTCAACCACTAGAACCTGAAGATTTGGAGCGTAACTATAGGGAAATATAA

Protein sequence

>MS.gene030656.t1

MIVAVLLCAFICSLALNSIIRCALRVSNVAINNNDSSLSSSNNNSPQLVNKGIKKKVLKKFPTVSYSAELKLPSLDIECMICLSEFTKGEKLRILPKCNHGFHVRCIDKWLKEHSSCPKCRQCLLETCRKIGGSQVQPIVLPVPETIITIQPLEPEDLERNYREI