Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene76533.t1 | XP_003597693.1 | 97.9 | 330 | 7 | 0 | 1 | 330 | 1 | 330 | 9.70E-182 | 646 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene76533.t1 | O04326 | 69.3 | 332 | 97 | 3 | 1 | 330 | 1 | 329 | 7.6e-127 | 454.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene76533.t1 | G7IUM0 | 97.9 | 330 | 7 | 0 | 1 | 330 | 1 | 330 | 7.0e-182 | 646.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049195 | MS.gene76533 | -0.820756 | 5.80E-53 | -1.69E-46 |
| MS.gene04933 | MS.gene76533 | -0.842309 | 2.80E-58 | -1.69E-46 |
| MS.gene049378 | MS.gene76533 | -0.878591 | 2.48E-69 | -1.69E-46 |
| MS.gene049435 | MS.gene76533 | -0.809007 | 2.34E-50 | -1.69E-46 |
| MS.gene049669 | MS.gene76533 | -0.816569 | 5.17E-52 | -1.69E-46 |
| MS.gene050226 | MS.gene76533 | -0.869575 | 2.79E-66 | -1.69E-46 |
| MS.gene050227 | MS.gene76533 | -0.881911 | 1.62E-70 | -1.69E-46 |
| MS.gene050228 | MS.gene76533 | -0.878079 | 3.75E-69 | -1.69E-46 |
| MS.gene050330 | MS.gene76533 | 0.827959 | 1.17E-54 | -1.69E-46 |
| MS.gene050442 | MS.gene76533 | -0.862227 | 5.88E-64 | -1.69E-46 |
| MS.gene050623 | MS.gene76533 | 0.836628 | 8.37E-57 | -1.69E-46 |
| MS.gene050633 | MS.gene76533 | -0.802488 | 5.48E-49 | -1.69E-46 |
| MS.gene050680 | MS.gene76533 | -0.821858 | 3.23E-53 | -1.69E-46 |
| MS.gene050719 | MS.gene76533 | -0.825323 | 4.99E-54 | -1.69E-46 |
| MS.gene050721 | MS.gene76533 | -0.823346 | 1.46E-53 | -1.69E-46 |
| MS.gene050724 | MS.gene76533 | -0.8226 | 2.17E-53 | -1.69E-46 |
| MS.gene050750 | MS.gene76533 | -0.828802 | 7.34E-55 | -1.69E-46 |
| MS.gene050762 | MS.gene76533 | -0.815119 | 1.09E-51 | -1.69E-46 |
| MS.gene050763 | MS.gene76533 | -0.816913 | 4.33E-52 | -1.69E-46 |
| MS.gene050780 | MS.gene76533 | -0.810883 | 9.24E-51 | -1.69E-46 |
| MS.gene050787 | MS.gene76533 | -0.886577 | 3.03E-72 | -1.69E-46 |
| MS.gene050820 | MS.gene76533 | -0.843133 | 1.69E-58 | -1.69E-46 |
| MS.gene050826 | MS.gene76533 | -0.830082 | 3.59E-55 | -1.69E-46 |
| MS.gene050953 | MS.gene76533 | -0.818968 | 1.49E-52 | -1.69E-46 |
| MS.gene05119 | MS.gene76533 | 0.820891 | 5.40E-53 | -1.69E-46 |
| MS.gene051210 | MS.gene76533 | -0.829455 | 5.10E-55 | -1.69E-46 |
| MS.gene051265 | MS.gene76533 | -0.820849 | 5.52E-53 | -1.69E-46 |
| MS.gene051568 | MS.gene76533 | -0.846573 | 2.00E-59 | -1.69E-46 |
| MS.gene051860 | MS.gene76533 | -0.834592 | 2.74E-56 | -1.69E-46 |
| MS.gene051924 | MS.gene76533 | 0.808817 | 2.57E-50 | -1.69E-46 |
| MS.gene051935 | MS.gene76533 | -0.824758 | 6.79E-54 | -1.69E-46 |
| MS.gene051983 | MS.gene76533 | -0.809387 | 1.94E-50 | -1.69E-46 |
| MS.gene052011 | MS.gene76533 | 0.828606 | 8.19E-55 | -1.69E-46 |
| MS.gene052042 | MS.gene76533 | -0.82991 | 3.95E-55 | -1.69E-46 |
| MS.gene052056 | MS.gene76533 | 0.810535 | 1.10E-50 | -1.69E-46 |
| MS.gene052176 | MS.gene76533 | -0.824274 | 8.82E-54 | -1.69E-46 |
| MS.gene052190 | MS.gene76533 | -0.823412 | 1.40E-53 | -1.69E-46 |
| MS.gene052323 | MS.gene76533 | -0.800083 | 1.70E-48 | -1.69E-46 |
| MS.gene052333 | MS.gene76533 | -0.85158 | 8.09E-61 | -1.69E-46 |
| MS.gene052358 | MS.gene76533 | 0.81369 | 2.25E-51 | -1.69E-46 |
| MS.gene052361 | MS.gene76533 | 0.809508 | 1.83E-50 | -1.69E-46 |
| MS.gene052384 | MS.gene76533 | -0.812678 | 3.76E-51 | -1.69E-46 |
| MS.gene052389 | MS.gene76533 | -0.850165 | 2.03E-60 | -1.69E-46 |
| MS.gene052586 | MS.gene76533 | -0.803853 | 2.86E-49 | -1.69E-46 |
| MS.gene052673 | MS.gene76533 | 0.806296 | 8.81E-50 | -1.69E-46 |
| MS.gene052896 | MS.gene76533 | -0.809671 | 1.69E-50 | -1.69E-46 |
| MS.gene053054 | MS.gene76533 | 0.839975 | 1.15E-57 | -1.69E-46 |
| MS.gene053147 | MS.gene76533 | -0.849589 | 2.93E-60 | -1.69E-46 |
| MS.gene053166 | MS.gene76533 | -0.82268 | 2.08E-53 | -1.69E-46 |
| MS.gene053221 | MS.gene76533 | -0.825344 | 4.93E-54 | -1.69E-46 |
| MS.gene053584 | MS.gene76533 | -0.812902 | 3.36E-51 | -1.69E-46 |
| MS.gene053811 | MS.gene76533 | -0.834465 | 2.95E-56 | -1.69E-46 |
| MS.gene053836 | MS.gene76533 | -0.822178 | 2.72E-53 | -1.69E-46 |
| MS.gene05414 | MS.gene76533 | -0.821264 | 4.43E-53 | -1.69E-46 |
| MS.gene05415 | MS.gene76533 | -0.823959 | 1.05E-53 | -1.69E-46 |
| MS.gene054183 | MS.gene76533 | -0.839322 | 1.70E-57 | -1.69E-46 |
| MS.gene054236 | MS.gene76533 | -0.805985 | 1.02E-49 | -1.69E-46 |
| MS.gene054291 | MS.gene76533 | 0.889281 | 2.79E-73 | -1.69E-46 |
| MS.gene054379 | MS.gene76533 | -0.832384 | 9.75E-56 | -1.69E-46 |
| MS.gene054405 | MS.gene76533 | -0.810215 | 1.29E-50 | -1.69E-46 |
| MS.gene054467 | MS.gene76533 | -0.87793 | 4.23E-69 | -1.69E-46 |
| MS.gene054468 | MS.gene76533 | -0.916282 | 2.15E-85 | -1.69E-46 |
| MS.gene054473 | MS.gene76533 | -0.822468 | 2.33E-53 | -1.69E-46 |
| MS.gene054559 | MS.gene76533 | -0.810799 | 9.63E-51 | -1.69E-46 |
| MS.gene054581 | MS.gene76533 | -0.844384 | 7.82E-59 | -1.69E-46 |
| MS.gene05468 | MS.gene76533 | -0.827347 | 1.65E-54 | -1.69E-46 |
| MS.gene054826 | MS.gene76533 | -0.856768 | 2.57E-62 | -1.69E-46 |
| MS.gene054930 | MS.gene76533 | -0.843739 | 1.16E-58 | -1.69E-46 |
| MS.gene055356 | MS.gene76533 | -0.846162 | 2.58E-59 | -1.69E-46 |
| MS.gene055357 | MS.gene76533 | -0.820934 | 5.28E-53 | -1.69E-46 |
| MS.gene055358 | MS.gene76533 | -0.851739 | 7.29E-61 | -1.69E-46 |
| MS.gene055701 | MS.gene76533 | -0.856537 | 3.01E-62 | -1.69E-46 |
| MS.gene055818 | MS.gene76533 | -0.829011 | 6.53E-55 | -1.69E-46 |
| MS.gene055926 | MS.gene76533 | -0.800547 | 1.37E-48 | -1.69E-46 |
| MS.gene05595 | MS.gene76533 | -0.839215 | 1.81E-57 | -1.69E-46 |
| MS.gene05604 | MS.gene76533 | -0.813367 | 2.65E-51 | -1.69E-46 |
| MS.gene056297 | MS.gene76533 | -0.806472 | 8.09E-50 | -1.69E-46 |
| MS.gene056506 | MS.gene76533 | -0.83867 | 2.51E-57 | -1.69E-46 |
| MS.gene056723 | MS.gene76533 | -0.807205 | 5.66E-50 | -1.69E-46 |
| MS.gene056779 | MS.gene76533 | -0.803864 | 2.84E-49 | -1.69E-46 |
| MS.gene056979 | MS.gene76533 | -0.814316 | 1.64E-51 | -1.69E-46 |
| MS.gene057012 | MS.gene76533 | -0.81397 | 1.95E-51 | -1.69E-46 |
| MS.gene057026 | MS.gene76533 | -0.842384 | 2.67E-58 | -1.69E-46 |
| MS.gene057194 | MS.gene76533 | -0.807268 | 5.49E-50 | -1.69E-46 |
| MS.gene057200 | MS.gene76533 | -0.800822 | 1.20E-48 | -1.69E-46 |
| MS.gene057469 | MS.gene76533 | -0.861612 | 9.08E-64 | -1.69E-46 |
| MS.gene05761 | MS.gene76533 | -0.847609 | 1.04E-59 | -1.69E-46 |
| MS.gene058139 | MS.gene76533 | -0.817195 | 3.74E-52 | -1.69E-46 |
| MS.gene058146 | MS.gene76533 | -0.809152 | 2.18E-50 | -1.69E-46 |
| MS.gene058220 | MS.gene76533 | -0.83145 | 1.66E-55 | -1.69E-46 |
| MS.gene058710 | MS.gene76533 | -0.811136 | 8.14E-51 | -1.69E-46 |
| MS.gene05872 | MS.gene76533 | -0.817782 | 2.76E-52 | -1.69E-46 |
| MS.gene058739 | MS.gene76533 | -0.82691 | 2.09E-54 | -1.69E-46 |
| MS.gene058935 | MS.gene76533 | -0.802085 | 6.63E-49 | -1.69E-46 |
| MS.gene059128 | MS.gene76533 | -0.822328 | 2.51E-53 | -1.69E-46 |
| MS.gene059161 | MS.gene76533 | -0.828349 | 9.45E-55 | -1.69E-46 |
| MS.gene059609 | MS.gene76533 | -0.834981 | 2.19E-56 | -1.69E-46 |
| MS.gene059664 | MS.gene76533 | -0.835761 | 1.39E-56 | -1.69E-46 |
| MS.gene059789 | MS.gene76533 | -0.809186 | 2.14E-50 | -1.69E-46 |
| MS.gene060122 | MS.gene76533 | 0.81644 | 5.52E-52 | -1.69E-46 |
| MS.gene060137 | MS.gene76533 | 0.856346 | 3.42E-62 | -1.69E-46 |
| MS.gene060322 | MS.gene76533 | -0.854426 | 1.24E-61 | -1.69E-46 |
| MS.gene060373 | MS.gene76533 | -0.818286 | 2.12E-52 | -1.69E-46 |
| MS.gene060404 | MS.gene76533 | -0.804411 | 2.19E-49 | -1.69E-46 |
| MS.gene060480 | MS.gene76533 | -0.81422 | 1.72E-51 | -1.69E-46 |
| MS.gene06052 | MS.gene76533 | -0.825038 | 5.83E-54 | -1.69E-46 |
| MS.gene060572 | MS.gene76533 | -0.806306 | 8.77E-50 | -1.69E-46 |
| MS.gene060634 | MS.gene76533 | 0.820215 | 7.72E-53 | -1.69E-46 |
| MS.gene060683 | MS.gene76533 | -0.835597 | 1.53E-56 | -1.69E-46 |
| MS.gene060685 | MS.gene76533 | -0.83735 | 5.47E-57 | -1.69E-46 |
| MS.gene060802 | MS.gene76533 | -0.832413 | 9.59E-56 | -1.69E-46 |
| MS.gene060803 | MS.gene76533 | -0.823001 | 1.75E-53 | -1.69E-46 |
| MS.gene060998 | MS.gene76533 | -0.818778 | 1.64E-52 | -1.69E-46 |
| MS.gene061040 | MS.gene76533 | 0.851773 | 7.13E-61 | -1.69E-46 |
| MS.gene061114 | MS.gene76533 | 0.856482 | 3.12E-62 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene76533.t1 | MTR_2g101270 | 97.879 | 330 | 7 | 0 | 1 | 330 | 1 | 330 | 0.0 | 659 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene76533.t1 | AT3G16310 | 69.277 | 332 | 97 | 3 | 1 | 330 | 1 | 329 | 5.79e-166 | 465 |
Find 103 sgRNAs with CRISPR-Local
Find 293 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCTCCAAATGATACTAATT+TGG | 0.190381 | 2.3:-2725868 | MS.gene76533:CDS |
| GAAGAATGGGTAACAGTATA+TGG | 0.215069 | 2.3:-2728053 | MS.gene76533:CDS |
| ATTAATGGAGTCCTAATTAT+TGG | 0.241844 | 2.3:-2725449 | MS.gene76533:CDS |
| GGAGTCGAAAATTCTCTATT+TGG | 0.255914 | 2.3:+2728326 | None:intergenic |
| ACTTCAGGCCTTGCCACTTC+TGG | 0.276867 | 2.3:+2728113 | None:intergenic |
| AAAATTCTCTATTTGGAGTT+TGG | 0.279174 | 2.3:+2728333 | None:intergenic |
| TTTCCCCGGCGGGCATTAAC+AGG | 0.283319 | 2.3:+2728536 | None:intergenic |
| TGTTCACCACCACTCTTTGC+AGG | 0.284691 | 2.3:+2728209 | None:intergenic |
| AAGAATGGAATACAAATTAA+TGG | 0.309323 | 2.3:-2725464 | MS.gene76533:CDS |
| TTGCCATTCTGCAGATAATA+TGG | 0.320989 | 2.3:+2725299 | None:intergenic |
| AAAACCAAATTAGTATCATT+TGG | 0.323538 | 2.3:+2725864 | None:intergenic |
| AAGGAATTTCGCTGGACTTC+AGG | 0.331878 | 2.3:+2728098 | None:intergenic |
| TCCTTGATTGTTAAGCCTTT+CGG | 0.335228 | 2.3:+2725388 | None:intergenic |
| GCTTCGGACTTGCCTTTCGC+TGG | 0.345748 | 2.3:+2728305 | None:intergenic |
| AGGGTTTCACACCAATAATT+AGG | 0.353677 | 2.3:+2725438 | None:intergenic |
| TAATCCAGTATGCCTGATTC+TGG | 0.358857 | 2.3:+2728398 | None:intergenic |
| TTCTCCAGAATCAGGCATAC+TGG | 0.373999 | 2.3:-2728402 | MS.gene76533:CDS |
| TACTTCTGGGTGCCTGGCAG+TGG | 0.374416 | 2.3:+2725346 | None:intergenic |
| TCAAACTAAGCGAGCCTTGT+TGG | 0.381381 | 2.3:+2728246 | None:intergenic |
| GCGTGAAAACTTTGGTAATT+CGG | 0.395948 | 2.3:-2728471 | MS.gene76533:CDS |
| GGCCTTGCCACTTCTGGTGG+TGG | 0.396977 | 2.3:+2728119 | None:intergenic |
| AAGGCTCGCTTAGTTTGAAT+TGG | 0.399188 | 2.3:-2728241 | MS.gene76533:CDS |
| TGTGCTTACTTCTGGGTGCC+TGG | 0.400037 | 2.3:+2725340 | None:intergenic |
| CCTGGCAGTGGGTAGAGGTA+AGG | 0.403276 | 2.3:+2725358 | None:intergenic |
| AGCACATCTTATGCTTTAAG+AGG | 0.412178 | 2.3:-2728281 | MS.gene76533:CDS |
| GAAATCTTAATGAGGAAGAA+TGG | 0.412872 | 2.3:-2728067 | MS.gene76533:CDS |
| GCACATCAAAAGCTCCTTCT+CGG | 0.416892 | 2.3:-2725322 | MS.gene76533:CDS |
| CAGGAGCATCTTCTTCTCTA+TGG | 0.417616 | 2.3:-2728493 | MS.gene76533:CDS |
| GGGTGCCTGGCAGTGGGTAG+AGG | 0.423344 | 2.3:+2725353 | None:intergenic |
| CTGGCCCTAGAGATGCTAAC+TGG | 0.425172 | 2.3:-2725800 | MS.gene76533:CDS |
| TGCTCCTGACTGGCTTGGAC+TGG | 0.428965 | 2.3:+2728508 | None:intergenic |
| ACCGAAAGGCTTAACAATCA+AGG | 0.430735 | 2.3:-2725389 | MS.gene76533:CDS |
| ACTTAGTCTCAGGAGACATT+TGG | 0.432323 | 2.3:+2728375 | None:intergenic |
| AGCATAAGATGTGCTGGCTT+CGG | 0.432389 | 2.3:+2728289 | None:intergenic |
| TCTCTATGGCGTGAAAACTT+TGG | 0.434782 | 2.3:-2728479 | MS.gene76533:CDS |
| TTCTCTATTTGGAGTTTGGA+TGG | 0.437107 | 2.3:+2728337 | None:intergenic |
| CTTGCCACTTCTGGTGGTGG+AGG | 0.448887 | 2.3:+2728122 | None:intergenic |
| GGTCAAAGCTTGACGTTGCA+TGG | 0.453671 | 2.3:+2725409 | None:intergenic |
| GCTCGCTTAGTTTGAATTGG+TGG | 0.454126 | 2.3:-2728238 | MS.gene76533:CDS |
| CAAAATGCTCTCAACAAGAA+TGG | 0.460346 | 2.3:-2725479 | MS.gene76533:CDS |
| GTCGAGGGTGTGGTTCAGCC+TGG | 0.461947 | 2.3:-2728161 | MS.gene76533:CDS |
| GGCTGAACCACACCCTCGAC+TGG | 0.463862 | 2.3:+2728164 | None:intergenic |
| TTATTGTCTGACTTAGTCTC+AGG | 0.468844 | 2.3:+2728365 | None:intergenic |
| GTCCATGATCTTGGATGCTA+AGG | 0.469908 | 2.3:+2725229 | None:intergenic |
| ATCCTTAGCATCCAAGATCA+TGG | 0.475742 | 2.3:-2725231 | MS.gene76533:CDS |
| ATTAAGATTTCCTGCAGGTA+AGG | 0.475811 | 2.3:+2728079 | None:intergenic |
| GTGAACAAGAGGAGAAAGGA+AGG | 0.476290 | 2.3:-2728193 | MS.gene76533:CDS |
| AATTATTGGTGTGAAACCCT+TGG | 0.478180 | 2.3:-2725435 | MS.gene76533:CDS |
| ATCCCCTGTTAATGCCCGCC+GGG | 0.480958 | 2.3:-2728540 | MS.gene76533:CDS |
| AAATCTTAATGAGGAAGAAT+GGG | 0.484177 | 2.3:-2728066 | MS.gene76533:CDS |
| AAACATCAAGTCCATGATCT+TGG | 0.488113 | 2.3:+2725220 | None:intergenic |
| GAAGATGCTCCTGACTGGCT+TGG | 0.495482 | 2.3:+2728503 | None:intergenic |
| GGTGGTGAACAAGAGGAGAA+AGG | 0.505138 | 2.3:-2728197 | MS.gene76533:CDS |
| TCAGGCCTTGCCACTTCTGG+TGG | 0.505586 | 2.3:+2728116 | None:intergenic |
| ACTTCTGGGTGCCTGGCAGT+GGG | 0.506491 | 2.3:+2725347 | None:intergenic |
| CAGTTAGCATCTCTAGGGCC+AGG | 0.509660 | 2.3:+2725801 | None:intergenic |
| GCGCAAAGAACTCCTAGGTC+TGG | 0.511122 | 2.3:-2728593 | MS.gene76533:CDS |
| AAGAATGGGTAACAGTATAT+GGG | 0.512808 | 2.3:-2728052 | MS.gene76533:intron |
| TTGACGTTGCATGGGATCCA+AGG | 0.518509 | 2.3:+2725418 | None:intergenic |
| TCTTAAAGCATAAGATGTGC+TGG | 0.519255 | 2.3:+2728283 | None:intergenic |
| CTGCAGGTAAGGAATTTCGC+TGG | 0.519335 | 2.3:+2728090 | None:intergenic |
| CATCCCCTGTTAATGCCCGC+CGG | 0.522742 | 2.3:-2728541 | MS.gene76533:CDS |
| AATGCAACTGCAAGGCAGAC+TGG | 0.522955 | 2.3:-2725278 | MS.gene76533:CDS |
| GTCAAAGCTTGACGTTGCAT+GGG | 0.523353 | 2.3:+2725410 | None:intergenic |
| GAGAAGAAGATGCTCCTGAC+TGG | 0.526749 | 2.3:+2728498 | None:intergenic |
| CCTTACCTCTACCCACTGCC+AGG | 0.527907 | 2.3:-2725358 | MS.gene76533:CDS |
| TCTCTATTTGGAGTTTGGAT+GGG | 0.529308 | 2.3:+2728338 | None:intergenic |
| TCCTCATTAAGATTTCCTGC+AGG | 0.533575 | 2.3:+2728074 | None:intergenic |
| CAGCGAAATTCCTTACCTGC+AGG | 0.534512 | 2.3:-2728089 | MS.gene76533:CDS |
| AACGTCAAGCTTTGACCGAA+AGG | 0.536916 | 2.3:-2725403 | MS.gene76533:CDS |
| GGGTTCTCCAGTCGAGGGTG+TGG | 0.537698 | 2.3:-2728171 | MS.gene76533:CDS |
| CCACAGCGCAAAGAACTCCT+AGG | 0.538182 | 2.3:-2728598 | MS.gene76533:CDS |
| TGCAGATAATATGGCCGAGA+AGG | 0.543834 | 2.3:+2725308 | None:intergenic |
| ACTGGAAAACTTTCCCCGGC+GGG | 0.548506 | 2.3:+2728526 | None:intergenic |
| GCACATCTTATGCTTTAAGA+GGG | 0.552808 | 2.3:-2728280 | MS.gene76533:CDS |
| CGGCCATATTATCTGCAGAA+TGG | 0.555153 | 2.3:-2725302 | MS.gene76533:CDS |
| TCTTCCTCCACCACCAGAAG+TGG | 0.556002 | 2.3:-2728126 | MS.gene76533:CDS |
| CTGGCAGTGGGTAGAGGTAA+GGG | 0.559275 | 2.3:+2725359 | None:intergenic |
| TTGGACTGGAAAACTTTCCC+CGG | 0.559593 | 2.3:+2728522 | None:intergenic |
| TGCATCCAGTTAGCATCTCT+AGG | 0.560762 | 2.3:+2725795 | None:intergenic |
| TTCCCCGGCGGGCATTAACA+GGG | 0.567742 | 2.3:+2728537 | None:intergenic |
| TGACGTTGCATGGGATCCAA+GGG | 0.567770 | 2.3:+2725419 | None:intergenic |
| AAAGTCTGATCTATCTTCCA+AGG | 0.574341 | 2.3:+2728424 | None:intergenic |
| AGGAAGGGGTTCTCCAGTCG+AGG | 0.579447 | 2.3:-2728177 | MS.gene76533:CDS |
| ACCTGCAGGAAATCTTAATG+AGG | 0.582251 | 2.3:-2728075 | MS.gene76533:CDS |
| TCCCCGGCGGGCATTAACAG+GGG | 0.586228 | 2.3:+2728538 | None:intergenic |
| GAACAAGAGGAGAAAGGAAG+GGG | 0.588864 | 2.3:-2728191 | MS.gene76533:CDS |
| CTCCACCACCAGAAGTGGCA+AGG | 0.589454 | 2.3:-2728121 | MS.gene76533:CDS |
| TGAACAAGAGGAGAAAGGAA+GGG | 0.599791 | 2.3:-2728192 | MS.gene76533:CDS |
| GCATCCAGTTAGCATCTCTA+GGG | 0.606367 | 2.3:+2725796 | None:intergenic |
| AAAGAGTGGTGGTGAACAAG+AGG | 0.606401 | 2.3:-2728204 | MS.gene76533:CDS |
| CCTAGGAGTTCTTTGCGCTG+TGG | 0.609099 | 2.3:+2728598 | None:intergenic |
| GGAAGAGTAATCAATGCACC+AGG | 0.629675 | 2.3:+2728143 | None:intergenic |
| GACTGGAAAACTTTCCCCGG+CGG | 0.634463 | 2.3:+2728525 | None:intergenic |
| CACATCTTATGCTTTAAGAG+GGG | 0.638647 | 2.3:-2728279 | MS.gene76533:CDS |
| AGTGACTGTCTACCAGACCT+AGG | 0.639843 | 2.3:+2728581 | None:intergenic |
| AGAATGGCAATGCAACTGCA+AGG | 0.651500 | 2.3:-2725286 | MS.gene76533:CDS |
| TCCCCTGTTAATGCCCGCCG+GGG | 0.661914 | 2.3:-2728539 | MS.gene76533:CDS |
| GGAAGGGGTTCTCCAGTCGA+GGG | 0.662892 | 2.3:-2728176 | MS.gene76533:CDS |
| GGGGTGCAGCAAAACCAACA+AGG | 0.670858 | 2.3:-2728260 | MS.gene76533:CDS |
| TGGTCGTCACCTGCAAAGAG+TGG | 0.678630 | 2.3:-2728218 | MS.gene76533:CDS |
| TCGTCACCTGCAAAGAGTGG+TGG | 0.691867 | 2.3:-2728215 | MS.gene76533:CDS |
| GCAACTGCAAGGCAGACTGG+AGG | 0.718127 | 2.3:-2725275 | MS.gene76533:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | GATTATACATTAAAAATAAA+AGG | + | chr2.3:2727569-2727588 | None:intergenic | 10.0% |
| !!! | AATTTTAAAAGAAAAAACAT+TGG | + | chr2.3:2728196-2728215 | None:intergenic | 10.0% |
| !!! | TTTGTTTAAATAAACTTTTT+GGG | - | chr2.3:2727331-2727350 | MS.gene76533:intron | 10.0% |
| !!! | TTTTGTTTAAATAAACTTTT+TGG | - | chr2.3:2727330-2727349 | MS.gene76533:intron | 10.0% |
| !! | AGAATTAAATCAAAACAAAA+TGG | + | chr2.3:2726182-2726201 | None:intergenic | 15.0% |
| !! | ATATTATTATCATCTTGAAT+GGG | - | chr2.3:2727397-2727416 | MS.gene76533:intron | 15.0% |
| !! | TATATTATTATCATCTTGAA+TGG | - | chr2.3:2727396-2727415 | MS.gene76533:intron | 15.0% |
| !!! | AACTTCTTTTTTTTATTTAG+TGG | + | chr2.3:2725968-2725987 | None:intergenic | 15.0% |
| !!! | AATTTTTCTTTATAAAGCAA+TGG | - | chr2.3:2728093-2728112 | MS.gene76533:CDS | 15.0% |
| !!! | ATTAAACATTTTAATCGTAA+GGG | - | chr2.3:2727039-2727058 | MS.gene76533:intron | 15.0% |
| !!! | TTTTCAGTTTGTTTATTTTT+AGG | - | chr2.3:2726754-2726773 | MS.gene76533:intron | 15.0% |
| !! | AAAACCAAATTAGTATCATT+TGG | + | chr2.3:2727955-2727974 | None:intergenic | 20.0% |
| !! | AAGAATGGAATACAAATTAA+TGG | - | chr2.3:2728352-2728371 | MS.gene76533:CDS | 20.0% |
| !! | ACATTGGAAATATTGATAAA+AGG | + | chr2.3:2728180-2728199 | None:intergenic | 20.0% |
| !! | ACGATTAAAATGTTTAATGT+TGG | + | chr2.3:2727037-2727056 | None:intergenic | 20.0% |
| !! | ATTGTTAATCCCTTATTATT+CGG | + | chr2.3:2727159-2727178 | None:intergenic | 20.0% |
| !! | TAATCATATATACTCTTGAA+TGG | + | chr2.3:2727878-2727897 | None:intergenic | 20.0% |
| !! | TCAAGAATAATTGTCTAAAA+GGG | - | chr2.3:2726354-2726373 | MS.gene76533:intron | 20.0% |
| !!! | AAAAATCTAAACCATTTTAG+CGG | + | chr2.3:2727303-2727322 | None:intergenic | 20.0% |
| !!! | AACTTGAAACTTTTAAACAT+AGG | + | chr2.3:2726831-2726850 | None:intergenic | 20.0% |
| !!! | AATTTGTATTTTGTAGGAAA+AGG | + | chr2.3:2727458-2727477 | None:intergenic | 20.0% |
| !!! | ATGATACTAATTTGGTTTTA+AGG | - | chr2.3:2727956-2727975 | MS.gene76533:intron | 20.0% |
| !!! | CATTAAACATTTTAATCGTA+AGG | - | chr2.3:2727038-2727057 | MS.gene76533:intron | 20.0% |
| !!! | CCACTTTAAAACTATTTATA+AGG | - | chr2.3:2725852-2725871 | MS.gene76533:CDS | 20.0% |
| !!! | CCTTATAAATAGTTTTAAAG+TGG | + | chr2.3:2725855-2725874 | None:intergenic | 20.0% |
| !!! | GATTTGTCAATTTTATAGAA+TGG | - | chr2.3:2727208-2727227 | MS.gene76533:intron | 20.0% |
| !!! | TATGTTTAAAAGTTTCAAGT+TGG | - | chr2.3:2726830-2726849 | MS.gene76533:intron | 20.0% |
| !!! | TGATACTAATTTGGTTTTAA+GGG | - | chr2.3:2727957-2727976 | MS.gene76533:intron | 20.0% |
| ! | AAATACCGCTTTATATTTGT+TGG | - | chr2.3:2727684-2727703 | MS.gene76533:intron | 25.0% |
| ! | AAATCTTAATGAGGAAGAAT+GGG | - | chr2.3:2725750-2725769 | MS.gene76533:intron | 25.0% |
| ! | AATACACATAGATTGTTAGT+TGG | + | chr2.3:2727532-2727551 | None:intergenic | 25.0% |
| ! | AGAGCATAAAGAAACATAAA+TGG | + | chr2.3:2726694-2726713 | None:intergenic | 25.0% |
| ! | AGTGATAATTCTCAAAACTT+TGG | + | chr2.3:2726270-2726289 | None:intergenic | 25.0% |
| ! | ATAAGGTTAAATTGCATGTT+TGG | + | chr2.3:2727098-2727117 | None:intergenic | 25.0% |
| ! | ATACACATAGATTGTTAGTT+GGG | + | chr2.3:2727531-2727550 | None:intergenic | 25.0% |
| ! | ATGTAATAGGTATATAGGTT+GGG | - | chr2.3:2726399-2726418 | MS.gene76533:intron | 25.0% |
| ! | ATTAATGGAGTCCTAATTAT+TGG | - | chr2.3:2728367-2728386 | MS.gene76533:CDS | 25.0% |
| ! | ATTGTAATGTTAGTAACGTT+CGG | + | chr2.3:2726858-2726877 | None:intergenic | 25.0% |
| ! | ATTTATGTTTCTTTATGCTC+TGG | - | chr2.3:2726693-2726712 | MS.gene76533:intron | 25.0% |
| ! | ATTTCTATCCATGATGTAAT+AGG | - | chr2.3:2726431-2726450 | MS.gene76533:intron | 25.0% |
| ! | CTCAAGAATAATTGTCTAAA+AGG | - | chr2.3:2726353-2726372 | MS.gene76533:intron | 25.0% |
| ! | CTGATATATTAAGAATTGAG+AGG | - | chr2.3:2726288-2726307 | MS.gene76533:intron | 25.0% |
| ! | GAAACCTAAAATAAACGTAA+GGG | + | chr2.3:2726798-2726817 | None:intergenic | 25.0% |
| ! | GTAAAATGTACCATATTTCT+AGG | + | chr2.3:2725884-2725903 | None:intergenic | 25.0% |
| ! | TCTACTTTAGCATTTACATT+TGG | - | chr2.3:2725799-2725818 | MS.gene76533:CDS | 25.0% |
| ! | TCTGAATTTCCGAATAATAA+GGG | - | chr2.3:2727147-2727166 | MS.gene76533:intron | 25.0% |
| ! | TGAAACCTAAAATAAACGTA+AGG | + | chr2.3:2726799-2726818 | None:intergenic | 25.0% |
| ! | TTCTCCAAATGATACTAATT+TGG | - | chr2.3:2727948-2727967 | MS.gene76533:intron | 25.0% |
| ! | TTCTGAATTTCCGAATAATA+AGG | - | chr2.3:2727146-2727165 | MS.gene76533:intron | 25.0% |
| ! | TTTATGTTTCTTTATGCTCT+GGG | - | chr2.3:2726694-2726713 | MS.gene76533:intron | 25.0% |
| !! | AAAATTCTCTATTTGGAGTT+TGG | + | chr2.3:2725486-2725505 | None:intergenic | 25.0% |
| !! | AATAATCAAGAGCATAATGA+GGG | - | chr2.3:2726572-2726591 | MS.gene76533:intron | 25.0% |
| !! | TTTAGGTTTAATTGCATGAT+TGG | - | chr2.3:2726771-2726790 | MS.gene76533:intron | 25.0% |
| !!! | ATTTTTAGAAGCATGTACAT+TGG | + | chr2.3:2727910-2727929 | None:intergenic | 25.0% |
| !!! | GTTTATTTTAGGTTTCAAGT+TGG | - | chr2.3:2726802-2726821 | MS.gene76533:intron | 25.0% |
| AAACCTAAAGTAAACGTTAG+GGG | - | chr2.3:2727071-2727090 | MS.gene76533:intron | 30.0% | |
| AAGAATGGGTAACAGTATAT+GGG | - | chr2.3:2725764-2725783 | MS.gene76533:intron | 30.0% | |
| AAGGATTTGTCCTAGAAATA+TGG | - | chr2.3:2725871-2725890 | MS.gene76533:CDS | 30.0% | |
| AATCATAGTATTCAAGCAAG+AGG | + | chr2.3:2728072-2728091 | None:intergenic | 30.0% | |
| AATGGAAAATAACACCCATT+AGG | + | chr2.3:2726676-2726695 | None:intergenic | 30.0% | |
| ACACTACTATCATTCCTTAT+CGG | + | chr2.3:2725829-2725848 | None:intergenic | 30.0% | |
| ACCTTCCAACAAATATAAAG+CGG | + | chr2.3:2727692-2727711 | None:intergenic | 30.0% | |
| AGAATAATTGTCTAAAAGGG+TGG | - | chr2.3:2726357-2726376 | MS.gene76533:intron | 30.0% | |
| AGAGTTAACTCAAAATTCGA+CGG | - | chr2.3:2726973-2726992 | MS.gene76533:intron | 30.0% | |
| ATAGATAATTGATTGTGCTG+AGG | - | chr2.3:2727822-2727841 | MS.gene76533:intron | 30.0% | |
| ATCTATGTGTATTGTTTCCA+AGG | - | chr2.3:2727539-2727558 | MS.gene76533:intron | 30.0% | |
| ATTAGGACATTATCTTAGAG+GGG | + | chr2.3:2726659-2726678 | None:intergenic | 30.0% | |
| ATTTCCATCCATGATGTAAT+AGG | - | chr2.3:2726386-2726405 | MS.gene76533:intron | 30.0% | |
| CATTAGGACATTATCTTAGA+GGG | + | chr2.3:2726660-2726679 | None:intergenic | 30.0% | |
| CCATGATGTAATAGGTATAT+AGG | - | chr2.3:2726394-2726413 | MS.gene76533:intron | 30.0% | |
| CCTATATACCTATTACATCA+TGG | + | chr2.3:2726397-2726416 | None:intergenic | 30.0% | |
| GAAACCTAAAGTAAACGTTA+GGG | - | chr2.3:2727070-2727089 | MS.gene76533:intron | 30.0% | |
| GAAATCTTAATGAGGAAGAA+TGG | - | chr2.3:2725749-2725768 | MS.gene76533:intron | 30.0% | |
| GAGGTAATCAGTTAGAATAT+TGG | - | chr2.3:2726307-2726326 | MS.gene76533:intron | 30.0% | |
| GATGTAATAGGTATATAGGT+TGG | - | chr2.3:2726398-2726417 | MS.gene76533:intron | 30.0% | |
| GCACTACTAAATACATTTCT+TGG | - | chr2.3:2728291-2728310 | MS.gene76533:CDS | 30.0% | |
| GCTCTTGAATATCTTTGATT+AGG | - | chr2.3:2727611-2727630 | MS.gene76533:intron | 30.0% | |
| GTAGCTGCAAAAAGTTTAAT+AGG | + | chr2.3:2727637-2727656 | None:intergenic | 30.0% | |
| GTTAGAATATTGGCAAAGTT+TGG | - | chr2.3:2726317-2726336 | MS.gene76533:intron | 30.0% | |
| TAAAAATAAAAGGTTGCCCT+TGG | + | chr2.3:2727559-2727578 | None:intergenic | 30.0% | |
| TAAGGGATTAACAATACCTA+TGG | - | chr2.3:2727164-2727183 | MS.gene76533:intron | 30.0% | |
| TAGATAATTGATTGTGCTGA+GGG | - | chr2.3:2727823-2727842 | MS.gene76533:intron | 30.0% | |
| TATACCTATTACATCATGGA+TGG | + | chr2.3:2726393-2726412 | None:intergenic | 30.0% | |
| TCATACACAATCACATATGT+TGG | - | chr2.3:2726124-2726143 | MS.gene76533:intron | 30.0% | |
| TCTATGTGTATTGTTTCCAA+GGG | - | chr2.3:2727540-2727559 | MS.gene76533:intron | 30.0% | |
| TGAAACCTAAAGTAAACGTT+AGG | - | chr2.3:2727069-2727088 | MS.gene76533:intron | 30.0% | |
| TTAAGGGAGTTTGAAAAATG+TGG | - | chr2.3:2727973-2727992 | MS.gene76533:intron | 30.0% | |
| TTGTAATGTTAGTAACGTTC+GGG | + | chr2.3:2726857-2726876 | None:intergenic | 30.0% | |
| ! | AAAACATTTGATTTCAGCAG+AGG | - | chr2.3:2726227-2726246 | MS.gene76533:intron | 30.0% |
| ! | AATCATTTTGTATCCGTTGA+TGG | + | chr2.3:2727484-2727503 | None:intergenic | 30.0% |
| ! | ATCATTTTGTATCCGTTGAT+GGG | + | chr2.3:2727483-2727502 | None:intergenic | 30.0% |
| ! | CAGTGTACTTGCTAAAAATA+AGG | + | chr2.3:2727115-2727134 | None:intergenic | 30.0% |
| ! | GAATAATCAAGAGCATAATG+AGG | - | chr2.3:2726571-2726590 | MS.gene76533:intron | 30.0% |
| ! | GTATAATCTTGTGAAGCTTT+TGG | - | chr2.3:2727581-2727600 | MS.gene76533:intron | 30.0% |
| ! | GTTTACTTTAGGTTTCAAAC+TGG | + | chr2.3:2727066-2727085 | None:intergenic | 30.0% |
| ! | TATTCACCACTTCTCTAAAA+AGG | + | chr2.3:2727719-2727738 | None:intergenic | 30.0% |
| ! | TGTCAATTTTATAGAATGGC+TGG | - | chr2.3:2727212-2727231 | MS.gene76533:intron | 30.0% |
| ! | TTACATTTGGTTTACCGATA+AGG | - | chr2.3:2725812-2725831 | MS.gene76533:CDS | 30.0% |
| !! | CTCTAAGATAATGTCCTAAT+GGG | - | chr2.3:2726659-2726678 | MS.gene76533:intron | 30.0% |
| !! | TAGACAAAACAAGAAGTACT+CGG | - | chr2.3:2726607-2726626 | MS.gene76533:intron | 30.0% |
| !! | TTTTGTTTAAAACGTCCACA+TGG | - | chr2.3:2726900-2726919 | MS.gene76533:intron | 30.0% |
| !!! | GAAATTTTGAAACATGTTCC+TGG | - | chr2.3:2727997-2728016 | MS.gene76533:intron | 30.0% |
| !!! | TAGACAGTCACTATTTTTTC+AGG | - | chr2.3:2725246-2725265 | MS.gene76533:CDS | 30.0% |
| AAAACCACTTCAGAGTAACA+AGG | + | chr2.3:2728233-2728252 | None:intergenic | 35.0% | |
| AAACATCAAGTCCATGATCT+TGG | + | chr2.3:2728599-2728618 | None:intergenic | 35.0% | |
| AAAGTCTGATCTATCTTCCA+AGG | + | chr2.3:2725395-2725414 | None:intergenic | 35.0% | |
| AATAAGTTGTGTTGTGCTAC+AGG | + | chr2.3:2726022-2726041 | None:intergenic | 35.0% | |
| AATACAAATTGCCCCATCAA+CGG | - | chr2.3:2727468-2727487 | MS.gene76533:intron | 35.0% | |
| AATGGTTTATTGAATCGGTG+AGG | + | chr2.3:2727852-2727871 | None:intergenic | 35.0% | |
| AATTATTGGTGTGAAACCCT+TGG | - | chr2.3:2728381-2728400 | MS.gene76533:CDS | 35.0% | |
| ACAATACCTATGGCTATGTA+TGG | - | chr2.3:2727174-2727193 | MS.gene76533:intron | 35.0% | |
| ACAATGTCAAAATAGCTGGA+TGG | + | chr2.3:2728148-2728167 | None:intergenic | 35.0% | |
| AGAATATTGGCAAAGTTTGG+TGG | - | chr2.3:2726320-2726339 | MS.gene76533:intron | 35.0% | |
| AGGGTTTCACACCAATAATT+AGG | + | chr2.3:2728381-2728400 | None:intergenic | 35.0% | |
| ATGCTGACATCAGTAACATA+AGG | - | chr2.3:2727009-2727028 | MS.gene76533:intron | 35.0% | |
| ATTAAGATTTCCTGCAGGTA+AGG | + | chr2.3:2725740-2725759 | None:intergenic | 35.0% | |
| CAAAATGCTCTCAACAAGAA+TGG | - | chr2.3:2728337-2728356 | MS.gene76533:CDS | 35.0% | |
| CCATTAGGACATTATCTTAG+AGG | + | chr2.3:2726661-2726680 | None:intergenic | 35.0% | |
| CTATCTTCCAAGGTGAAAAA+AGG | + | chr2.3:2725385-2725404 | None:intergenic | 35.0% | |
| GAAGAATGGGTAACAGTATA+TGG | - | chr2.3:2725763-2725782 | MS.gene76533:intron | 35.0% | |
| GACAACAATGTCAAAATAGC+TGG | + | chr2.3:2728152-2728171 | None:intergenic | 35.0% | |
| GCAAAAATCATAGCTAGTTC+CGG | - | chr2.3:2727267-2727286 | MS.gene76533:intron | 35.0% | |
| GGAGTCGAAAATTCTCTATT+TGG | + | chr2.3:2725493-2725512 | None:intergenic | 35.0% | |
| GGCCAAATGGTTTATTGAAT+CGG | + | chr2.3:2727857-2727876 | None:intergenic | 35.0% | |
| GTTAGTTGGGCAAGAAAAAT+GGG | + | chr2.3:2727518-2727537 | None:intergenic | 35.0% | |
| TAACTCAAAATTCGACGGAA+AGG | - | chr2.3:2726978-2726997 | MS.gene76533:intron | 35.0% | |
| TAACTTCCTCTCTGCAAAAA+AGG | + | chr2.3:2726635-2726654 | None:intergenic | 35.0% | |
| TAGTGCATAGCCTAATATCA+GGG | + | chr2.3:2728277-2728296 | None:intergenic | 35.0% | |
| TATACTCTTGAATGGCCAAA+TGG | + | chr2.3:2727870-2727889 | None:intergenic | 35.0% | |
| TCATAGTCGTCTTTACAATC+TGG | + | chr2.3:2726045-2726064 | None:intergenic | 35.0% | |
| TCCTTGATTGTTAAGCCTTT+CGG | + | chr2.3:2728431-2728450 | None:intergenic | 35.0% | |
| TCTTAAAGCATAAGATGTGC+TGG | + | chr2.3:2725536-2725555 | None:intergenic | 35.0% | |
| TGCTGACATCAGTAACATAA+GGG | - | chr2.3:2727010-2727029 | MS.gene76533:intron | 35.0% | |
| TGTTAGTTGGGCAAGAAAAA+TGG | + | chr2.3:2727519-2727538 | None:intergenic | 35.0% | |
| TTATTGTCTGACTTAGTCTC+AGG | + | chr2.3:2725454-2725473 | None:intergenic | 35.0% | |
| TTGCCATTCTGCAGATAATA+TGG | + | chr2.3:2728520-2728539 | None:intergenic | 35.0% | |
| TTGTTAACCACCCTGATATT+AGG | - | chr2.3:2728264-2728283 | MS.gene76533:CDS | 35.0% | |
| ! | ACCGCTTTATATTTGTTGGA+AGG | - | chr2.3:2727688-2727707 | MS.gene76533:intron | 35.0% |
| ! | AGCACATCTTATGCTTTAAG+AGG | - | chr2.3:2725535-2725554 | MS.gene76533:intron | 35.0% |
| ! | CTTTTGATGTGCTTACTTCT+GGG | + | chr2.3:2728486-2728505 | None:intergenic | 35.0% |
| ! | GCGTGAAAACTTTGGTAATT+CGG | - | chr2.3:2725345-2725364 | MS.gene76533:CDS | 35.0% |
| ! | GCTAAAATCATATTTGCTGC+AGG | - | chr2.3:2726498-2726517 | MS.gene76533:intron | 35.0% |
| ! | TAATAGGTATATAGGTTGGG+TGG | - | chr2.3:2726402-2726421 | MS.gene76533:intron | 35.0% |
| ! | TCATTTTGTATCCGTTGATG+GGG | + | chr2.3:2727482-2727501 | None:intergenic | 35.0% |
| ! | TCTCTATTTGGAGTTTGGAT+GGG | + | chr2.3:2725481-2725500 | None:intergenic | 35.0% |
| ! | TGGATGCTAAGGATTTTGTT+GGG | + | chr2.3:2728579-2728598 | None:intergenic | 35.0% |
| ! | TGGGGCAATTTGTATTTTGT+AGG | + | chr2.3:2727464-2727483 | None:intergenic | 35.0% |
| ! | TTCTCTATTTGGAGTTTGGA+TGG | + | chr2.3:2725482-2725501 | None:intergenic | 35.0% |
| ! | TTGGATGCTAAGGATTTTGT+TGG | + | chr2.3:2728580-2728599 | None:intergenic | 35.0% |
| !! | AGACAAAACAAGAAGTACTC+GGG | - | chr2.3:2726608-2726627 | MS.gene76533:intron | 35.0% |
| !! | CACATCTTATGCTTTAAGAG+GGG | - | chr2.3:2725537-2725556 | MS.gene76533:intron | 35.0% |
| !! | CACCGATTCAATAAACCATT+TGG | - | chr2.3:2727852-2727871 | MS.gene76533:intron | 35.0% |
| !! | CCTCTAAGATAATGTCCTAA+TGG | - | chr2.3:2726658-2726677 | MS.gene76533:intron | 35.0% |
| !! | GCACATCTTATGCTTTAAGA+GGG | - | chr2.3:2725536-2725555 | MS.gene76533:intron | 35.0% |
| !! | TGGTCCCTTACGTTTATTTT+AGG | - | chr2.3:2726791-2726810 | MS.gene76533:intron | 35.0% |
| AATTCCTGGTTTAGTGCAGT+AGG | - | chr2.3:2726720-2726739 | MS.gene76533:intron | 40.0% | |
| ACACAATCACATATGTTGGC+AGG | - | chr2.3:2726128-2726147 | MS.gene76533:intron | 40.0% | |
| ACCAATCCATACATAGCCAT+AGG | + | chr2.3:2727183-2727202 | None:intergenic | 40.0% | |
| ACCGAAAGGCTTAACAATCA+AGG | - | chr2.3:2728427-2728446 | MS.gene76533:CDS | 40.0% | |
| ACCTATGGCTATGTATGGAT+TGG | - | chr2.3:2727179-2727198 | MS.gene76533:intron | 40.0% | |
| ACCTGCAGGAAATCTTAATG+AGG | - | chr2.3:2725741-2725760 | MS.gene76533:intron | 40.0% | |
| ACTTAGTCTCAGGAGACATT+TGG | + | chr2.3:2725444-2725463 | None:intergenic | 40.0% | |
| ATCCTTAGCATCCAAGATCA+TGG | - | chr2.3:2728585-2728604 | MS.gene76533:CDS | 40.0% | |
| ATTGTCTAAAAGGGTGGCAA+TGG | - | chr2.3:2726363-2726382 | MS.gene76533:intron | 40.0% | |
| CACAATCACATATGTTGGCA+GGG | - | chr2.3:2726129-2726148 | MS.gene76533:intron | 40.0% | |
| GGACACACAGATAACTTTGT+GGG | - | chr2.3:2726929-2726948 | MS.gene76533:intron | 40.0% | |
| GTAGTGCATAGCCTAATATC+AGG | + | chr2.3:2728278-2728297 | None:intergenic | 40.0% | |
| TAAAACGTCCACATGGCTAA+CGG | - | chr2.3:2726907-2726926 | MS.gene76533:intron | 40.0% | |
| TAATCCAGTATGCCTGATTC+TGG | + | chr2.3:2725421-2725440 | None:intergenic | 40.0% | |
| TCCTCATTAAGATTTCCTGC+AGG | + | chr2.3:2725745-2725764 | None:intergenic | 40.0% | |
| TCTCTATGGCGTGAAAACTT+TGG | - | chr2.3:2725337-2725356 | MS.gene76533:CDS | 40.0% | |
| TCTTCCAAGGTGAAAAAAGG+AGG | + | chr2.3:2725382-2725401 | None:intergenic | 40.0% | |
| TGAACAAGAGGAGAAAGGAA+GGG | - | chr2.3:2725624-2725643 | MS.gene76533:intron | 40.0% | |
| TGTCAAAATAGCTGGATGGA+TGG | + | chr2.3:2728144-2728163 | None:intergenic | 40.0% | |
| TGTTGTGCTACAGGAAACAT+GGG | + | chr2.3:2726013-2726032 | None:intergenic | 40.0% | |
| ! | AAGGCTCGCTTAGTTTGAAT+TGG | - | chr2.3:2725575-2725594 | MS.gene76533:intron | 40.0% |
| ! | ACTTTTTGCAGCTACGTTTG+AGG | - | chr2.3:2727642-2727661 | MS.gene76533:intron | 40.0% |
| ! | CTGGATGCACATTTTGTATC+AGG | - | chr2.3:2728035-2728054 | MS.gene76533:intron | 40.0% |
| ! | GCTTTTGATGTGCTTACTTC+TGG | + | chr2.3:2728487-2728506 | None:intergenic | 40.0% |
| ! | GGATGCTAAGGATTTTGTTG+GGG | + | chr2.3:2728578-2728597 | None:intergenic | 40.0% |
| ! | GTATATAGGTTGGGTGGTAA+TGG | - | chr2.3:2726408-2726427 | MS.gene76533:intron | 40.0% |
| ! | TCACCACTTCTCTAAAAAGG+AGG | + | chr2.3:2727716-2727735 | None:intergenic | 40.0% |
| ! | TCAGACTTTTCTCCAGAATC+AGG | - | chr2.3:2725406-2725425 | MS.gene76533:CDS | 40.0% |
| ! | TTTTCCTACTGCACTAAACC+AGG | + | chr2.3:2726727-2726746 | None:intergenic | 40.0% |
| !! | GACAAAACAAGAAGTACTCG+GGG | - | chr2.3:2726609-2726628 | MS.gene76533:intron | 40.0% |
| !! | GTACCTCCTTTTTAGAGAAG+TGG | - | chr2.3:2727710-2727729 | MS.gene76533:intron | 40.0% |
| !! | TTGGATTGGCACACAAGATA+CGG | + | chr2.3:2728119-2728138 | None:intergenic | 40.0% |
| AAAACGTCCACATGGCTAAC+GGG | - | chr2.3:2726908-2726927 | MS.gene76533:intron | 45.0% | |
| AACTGCAGTGAAGACTGTAG+CGG | - | chr2.3:2727235-2727254 | MS.gene76533:intron | 45.0% | |
| AAGGAATTTCGCTGGACTTC+AGG | + | chr2.3:2725721-2725740 | None:intergenic | 45.0% | |
| AATAGCTGGATGGATGGTCT+TGG | + | chr2.3:2728138-2728157 | None:intergenic | 45.0% | |
| AGAATGGCAATGCAACTGCA+AGG | - | chr2.3:2728530-2728549 | MS.gene76533:CDS | 45.0% | |
| AGACCACAACGTGGATAGTA+TGG | - | chr2.3:2726473-2726492 | MS.gene76533:intron | 45.0% | |
| CACTTCAGAGTAACAAGGCA+TGG | + | chr2.3:2728228-2728247 | None:intergenic | 45.0% | |
| CGGCCATATTATCTGCAGAA+TGG | - | chr2.3:2728514-2728533 | MS.gene76533:CDS | 45.0% | |
| GAACAAGAGGAGAAAGGAAG+GGG | - | chr2.3:2725625-2725644 | MS.gene76533:intron | 45.0% | |
| GCACATCAAAAGCTCCTTCT+CGG | - | chr2.3:2728494-2728513 | MS.gene76533:CDS | 45.0% | |
| GCATCCAGTTAGCATCTCTA+GGG | + | chr2.3:2728023-2728042 | None:intergenic | 45.0% | |
| GGAAGAGTAATCAATGCACC+AGG | + | chr2.3:2725676-2725695 | None:intergenic | 45.0% | |
| GGGACACACAGATAACTTTG+TGG | - | chr2.3:2726928-2726947 | MS.gene76533:intron | 45.0% | |
| GGTCCCCTAACGTTTACTTT+AGG | + | chr2.3:2727077-2727096 | None:intergenic | 45.0% | |
| GTCAAAGCTTGACGTTGCAT+GGG | + | chr2.3:2728409-2728428 | None:intergenic | 45.0% | |
| GTCCATGATCTTGGATGCTA+AGG | + | chr2.3:2728590-2728609 | None:intergenic | 45.0% | |
| GTGAACAAGAGGAGAAAGGA+AGG | - | chr2.3:2725623-2725642 | MS.gene76533:intron | 45.0% | |
| GTGTTGTGCTACAGGAAACA+TGG | + | chr2.3:2726014-2726033 | None:intergenic | 45.0% | |
| TCCAAGGTGAAAAAAGGAGG+CGG | + | chr2.3:2725379-2725398 | None:intergenic | 45.0% | |
| TGCAGATAATATGGCCGAGA+AGG | + | chr2.3:2728511-2728530 | None:intergenic | 45.0% | |
| TGCATAGCCTAATATCAGGG+TGG | + | chr2.3:2728274-2728293 | None:intergenic | 45.0% | |
| TGCATCCAGTTAGCATCTCT+AGG | + | chr2.3:2728024-2728043 | None:intergenic | 45.0% | |
| TTCTCCAGAATCAGGCATAC+TGG | - | chr2.3:2725414-2725433 | MS.gene76533:CDS | 45.0% | |
| TTGCTGCAGGAATTCCCATA+TGG | - | chr2.3:2726511-2726530 | MS.gene76533:intron | 45.0% | |
| ! | AAAGAGTGGTGGTGAACAAG+AGG | - | chr2.3:2725612-2725631 | MS.gene76533:intron | 45.0% |
| ! | AACGTCAAGCTTTGACCGAA+AGG | - | chr2.3:2728413-2728432 | MS.gene76533:CDS | 45.0% |
| ! | CAAGAGCATAATGAGGGACA+GGG | - | chr2.3:2726578-2726597 | MS.gene76533:intron | 45.0% |
| ! | CATGCCTTGTTACTCTGAAG+TGG | - | chr2.3:2728226-2728245 | MS.gene76533:CDS | 45.0% |
| ! | GAATTTTCGACTCCAGCGAA+AGG | - | chr2.3:2725499-2725518 | MS.gene76533:intron | 45.0% |
| ! | GCTCGCTTAGTTTGAATTGG+TGG | - | chr2.3:2725578-2725597 | MS.gene76533:intron | 45.0% |
| ! | GGATTTTGTTGGGGAAGCAA+TGG | + | chr2.3:2728569-2728588 | None:intergenic | 45.0% |
| ! | TATGCTCTGGGTTGAATTCC+TGG | - | chr2.3:2726706-2726725 | MS.gene76533:intron | 45.0% |
| ! | TCAAACTAAGCGAGCCTTGT+TGG | + | chr2.3:2725573-2725592 | None:intergenic | 45.0% |
| ! | TCAAGAGCATAATGAGGGAC+AGG | - | chr2.3:2726577-2726596 | MS.gene76533:intron | 45.0% |
| ! | TTGGACTGGAAAACTTTCCC+CGG | + | chr2.3:2725297-2725316 | None:intergenic | 45.0% |
| !! | ACCATTTTAGCGGACATTCG+TGG | + | chr2.3:2727293-2727312 | None:intergenic | 45.0% |
| !! | AGCATAAGATGTGCTGGCTT+CGG | + | chr2.3:2725530-2725549 | None:intergenic | 45.0% |
| !! | CAGGAGCATCTTCTTCTCTA+TGG | - | chr2.3:2725323-2725342 | MS.gene76533:CDS | 45.0% |
| AAGGTGAAAAAAGGAGGCGG+AGG | + | chr2.3:2725376-2725395 | None:intergenic | 50.0% | |
| AATGCAACTGCAAGGCAGAC+TGG | - | chr2.3:2728538-2728557 | MS.gene76533:CDS | 50.0% | |
| AGTGACTGTCTACCAGACCT+AGG | + | chr2.3:2725238-2725257 | None:intergenic | 50.0% | |
| CAGCGAAATTCCTTACCTGC+AGG | - | chr2.3:2725727-2725746 | MS.gene76533:intron | 50.0% | |
| CCACAACGTGGATAGTATGG+TGG | - | chr2.3:2726476-2726495 | MS.gene76533:intron | 50.0% | |
| CCACCATACTATCCACGTTG+TGG | + | chr2.3:2726479-2726498 | None:intergenic | 50.0% | |
| CTCACTCCTACCTGCCATAT+GGG | + | chr2.3:2726528-2726547 | None:intergenic | 50.0% | |
| CTGCAGGTAAGGAATTTCGC+TGG | + | chr2.3:2725729-2725748 | None:intergenic | 50.0% | |
| GAGAAGAAGATGCTCCTGAC+TGG | + | chr2.3:2725321-2725340 | None:intergenic | 50.0% | |
| GCCACGAATGTCCGCTAAAA+TGG | - | chr2.3:2727289-2727308 | MS.gene76533:intron | 50.0% | |
| GGAATTCCCATATGGCAGGT+AGG | - | chr2.3:2726519-2726538 | MS.gene76533:intron | 50.0% | |
| GGTCAAAGCTTGACGTTGCA+TGG | + | chr2.3:2728410-2728429 | None:intergenic | 50.0% | |
| GGTGGTGAACAAGAGGAGAA+AGG | - | chr2.3:2725619-2725638 | MS.gene76533:intron | 50.0% | |
| GTAGATGTCAGACCACAACG+TGG | - | chr2.3:2726464-2726483 | MS.gene76533:intron | 50.0% | |
| TGAAAAAAGGAGGCGGAGGA+AGG | + | chr2.3:2725372-2725391 | None:intergenic | 50.0% | |
| TGACGTTGCATGGGATCCAA+GGG | + | chr2.3:2728400-2728419 | None:intergenic | 50.0% | |
| TGCAGGAATTCCCATATGGC+AGG | - | chr2.3:2726515-2726534 | MS.gene76533:intron | 50.0% | |
| TGTTCACCACCACTCTTTGC+AGG | + | chr2.3:2725610-2725629 | None:intergenic | 50.0% | |
| TTGACGTTGCATGGGATCCA+AGG | + | chr2.3:2728401-2728420 | None:intergenic | 50.0% | |
| ! | ATAACTTTGTGGGTGCCACG+TGG | - | chr2.3:2726939-2726958 | MS.gene76533:intron | 50.0% |
| ! | CTCTGTCTGAAACAACCACG+TGG | + | chr2.3:2726957-2726976 | None:intergenic | 50.0% |
| ! | CTGGATGGATGGTCTTGGAT+TGG | + | chr2.3:2728133-2728152 | None:intergenic | 50.0% |
| ! | TTTTCCAGTCCAAGCCAGTC+AGG | - | chr2.3:2725304-2725323 | MS.gene76533:CDS | 50.0% |
| !! | TTTTAGCGGACATTCGTGGC+CGG | + | chr2.3:2727289-2727308 | None:intergenic | 50.0% |
| !!! | TCCGCCTCCTTTTTTCACCT+TGG | - | chr2.3:2725375-2725394 | MS.gene76533:CDS | 50.0% |
| ACTGGAAAACTTTCCCCGGC+GGG | + | chr2.3:2725293-2725312 | None:intergenic | 55.0% | |
| CCACAGCGCAAAGAACTCCT+AGG | - | chr2.3:2725218-2725237 | MS.gene76533:CDS | 55.0% | |
| CCATATGGCAGGTAGGAGTG+AGG | - | chr2.3:2726526-2726545 | MS.gene76533:intron | 55.0% | |
| CCTAGGAGTTCTTTGCGCTG+TGG | + | chr2.3:2725221-2725240 | None:intergenic | 55.0% | |
| CCTCACTCCTACCTGCCATA+TGG | + | chr2.3:2726529-2726548 | None:intergenic | 55.0% | |
| CTGGCAGTGGGTAGAGGTAA+GGG | + | chr2.3:2728460-2728479 | None:intergenic | 55.0% | |
| CTGGCCCTAGAGATGCTAAC+TGG | - | chr2.3:2728016-2728035 | MS.gene76533:intron | 55.0% | |
| GACTGGAAAACTTTCCCCGG+CGG | + | chr2.3:2725294-2725313 | None:intergenic | 55.0% | |
| GCATAATGAGGGACAGGGTG+AGG | - | chr2.3:2726583-2726602 | MS.gene76533:intron | 55.0% | |
| GCGCAAAGAACTCCTAGGTC+TGG | - | chr2.3:2725223-2725242 | MS.gene76533:CDS | 55.0% | |
| GGGGTGCAGCAAAACCAACA+AGG | - | chr2.3:2725556-2725575 | MS.gene76533:intron | 55.0% | |
| TCGTCACCTGCAAAGAGTGG+TGG | - | chr2.3:2725601-2725620 | MS.gene76533:intron | 55.0% | |
| TCTTCCTCCACCACCAGAAG+TGG | - | chr2.3:2725690-2725709 | MS.gene76533:intron | 55.0% | |
| TGGTCGTCACCTGCAAAGAG+TGG | - | chr2.3:2725598-2725617 | MS.gene76533:intron | 55.0% | |
| TGTGCTTACTTCTGGGTGCC+TGG | + | chr2.3:2728479-2728498 | None:intergenic | 55.0% | |
| TGTGTGTCCCGTTAGCCATG+TGG | + | chr2.3:2726918-2726937 | None:intergenic | 55.0% | |
| ! | ACTTCAGGCCTTGCCACTTC+TGG | + | chr2.3:2725706-2725725 | None:intergenic | 55.0% |
| ! | GAAGATGCTCCTGACTGGCT+TGG | + | chr2.3:2725316-2725335 | None:intergenic | 55.0% |
| !! | CAGTTAGCATCTCTAGGGCC+AGG | + | chr2.3:2728018-2728037 | None:intergenic | 55.0% |
| !!! | TCGGGGCCTTTTTTGCAGAG+AGG | - | chr2.3:2726626-2726645 | MS.gene76533:intron | 55.0% |
| ACTTCTGGGTGCCTGGCAGT+GGG | + | chr2.3:2728472-2728491 | None:intergenic | 60.0% | |
| AGGAAGGGGTTCTCCAGTCG+AGG | - | chr2.3:2725639-2725658 | MS.gene76533:intron | 60.0% | |
| ATCCCCTGTTAATGCCCGCC+GGG | - | chr2.3:2725276-2725295 | MS.gene76533:CDS | 60.0% | |
| CATCCCCTGTTAATGCCCGC+CGG | - | chr2.3:2725275-2725294 | MS.gene76533:CDS | 60.0% | |
| CCTGGCAGTGGGTAGAGGTA+AGG | + | chr2.3:2728461-2728480 | None:intergenic | 60.0% | |
| CCTTACCTCTACCCACTGCC+AGG | - | chr2.3:2728458-2728477 | MS.gene76533:CDS | 60.0% | |
| CTCCACCACCAGAAGTGGCA+AGG | - | chr2.3:2725695-2725714 | MS.gene76533:intron | 60.0% | |
| GCAACTGCAAGGCAGACTGG+AGG | - | chr2.3:2728541-2728560 | MS.gene76533:CDS | 60.0% | |
| GCTTCGGACTTGCCTTTCGC+TGG | + | chr2.3:2725514-2725533 | None:intergenic | 60.0% | |
| GGAAGGGGTTCTCCAGTCGA+GGG | - | chr2.3:2725640-2725659 | MS.gene76533:intron | 60.0% | |
| TACTTCTGGGTGCCTGGCAG+TGG | + | chr2.3:2728473-2728492 | None:intergenic | 60.0% | |
| TTCCCCGGCGGGCATTAACA+GGG | + | chr2.3:2725282-2725301 | None:intergenic | 60.0% | |
| TTTCCCCGGCGGGCATTAAC+AGG | + | chr2.3:2725283-2725302 | None:intergenic | 60.0% | |
| ! | TCAGGCCTTGCCACTTCTGG+TGG | + | chr2.3:2725703-2725722 | None:intergenic | 60.0% |
| !! | CTTGCCACTTCTGGTGGTGG+AGG | + | chr2.3:2725697-2725716 | None:intergenic | 60.0% |
| !! | TGCTCCTGACTGGCTTGGAC+TGG | + | chr2.3:2725311-2725330 | None:intergenic | 60.0% |
| GGCTGAACCACACCCTCGAC+TGG | + | chr2.3:2725655-2725674 | None:intergenic | 65.0% | |
| GGGTTCTCCAGTCGAGGGTG+TGG | - | chr2.3:2725645-2725664 | MS.gene76533:intron | 65.0% | |
| TCCCCGGCGGGCATTAACAG+GGG | + | chr2.3:2725281-2725300 | None:intergenic | 65.0% | |
| TCCCCTGTTAATGCCCGCCG+GGG | - | chr2.3:2725277-2725296 | MS.gene76533:CDS | 65.0% | |
| ! | GGCCTTGCCACTTCTGGTGG+TGG | + | chr2.3:2725700-2725719 | None:intergenic | 65.0% |
| ! | GTCGAGGGTGTGGTTCAGCC+TGG | - | chr2.3:2725655-2725674 | MS.gene76533:intron | 65.0% |
| GGGTGCCTGGCAGTGGGTAG+AGG | + | chr2.3:2728466-2728485 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2.3 | gene | 2725211 | 2728627 | 2725211 | ID=MS.gene76533 |
| chr2.3 | mRNA | 2725211 | 2728627 | 2725211 | ID=MS.gene76533.t1;Parent=MS.gene76533 |
| chr2.3 | exon | 2728053 | 2728627 | 2728053 | ID=MS.gene76533.t1.exon1;Parent=MS.gene76533.t1 |
| chr2.3 | CDS | 2728053 | 2728627 | 2728053 | ID=cds.MS.gene76533.t1;Parent=MS.gene76533.t1 |
| chr2.3 | exon | 2725782 | 2725893 | 2725782 | ID=MS.gene76533.t1.exon2;Parent=MS.gene76533.t1 |
| chr2.3 | CDS | 2725782 | 2725893 | 2725782 | ID=cds.MS.gene76533.t1;Parent=MS.gene76533.t1 |
| chr2.3 | exon | 2725211 | 2725516 | 2725211 | ID=MS.gene76533.t1.exon3;Parent=MS.gene76533.t1 |
| chr2.3 | CDS | 2725211 | 2725516 | 2725211 | ID=cds.MS.gene76533.t1;Parent=MS.gene76533.t1 |
| Gene Sequence |
| Protein sequence |
