Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene069868.t1 | XP_003597693.1 | 97.9 | 330 | 7 | 0 | 1 | 330 | 1 | 330 | 9.70E-182 | 646 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene069868.t1 | O04326 | 69.3 | 332 | 97 | 3 | 1 | 330 | 1 | 329 | 7.6e-127 | 454.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene069868.t1 | G7IUM0 | 97.9 | 330 | 7 | 0 | 1 | 330 | 1 | 330 | 7.0e-182 | 646.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049195 | MS.gene069868 | -0.814509 | 1.49E-51 | -1.69E-46 |
| MS.gene04933 | MS.gene069868 | -0.844998 | 5.34E-59 | -1.69E-46 |
| MS.gene049378 | MS.gene069868 | -0.881807 | 1.77E-70 | -1.69E-46 |
| MS.gene049435 | MS.gene069868 | -0.815394 | 9.46E-52 | -1.69E-46 |
| MS.gene049669 | MS.gene069868 | -0.81796 | 2.51E-52 | -1.69E-46 |
| MS.gene050226 | MS.gene069868 | -0.874258 | 7.77E-68 | -1.69E-46 |
| MS.gene050227 | MS.gene069868 | -0.886919 | 2.25E-72 | -1.69E-46 |
| MS.gene050228 | MS.gene069868 | -0.881381 | 2.52E-70 | -1.69E-46 |
| MS.gene050330 | MS.gene069868 | 0.833243 | 5.96E-56 | -1.69E-46 |
| MS.gene050442 | MS.gene069868 | -0.865615 | 5.19E-65 | -1.69E-46 |
| MS.gene050623 | MS.gene069868 | 0.840863 | 6.73E-58 | -1.69E-46 |
| MS.gene050633 | MS.gene069868 | -0.805561 | 1.26E-49 | -1.69E-46 |
| MS.gene050680 | MS.gene069868 | -0.829636 | 4.61E-55 | -1.69E-46 |
| MS.gene050719 | MS.gene069868 | -0.828233 | 1.01E-54 | -1.69E-46 |
| MS.gene050721 | MS.gene069868 | -0.826354 | 2.84E-54 | -1.69E-46 |
| MS.gene050724 | MS.gene069868 | -0.825934 | 3.57E-54 | -1.69E-46 |
| MS.gene050750 | MS.gene069868 | -0.829388 | 5.29E-55 | -1.69E-46 |
| MS.gene050762 | MS.gene069868 | -0.82085 | 5.52E-53 | -1.69E-46 |
| MS.gene050763 | MS.gene069868 | -0.822787 | 1.97E-53 | -1.69E-46 |
| MS.gene050780 | MS.gene069868 | -0.817368 | 3.42E-52 | -1.69E-46 |
| MS.gene050787 | MS.gene069868 | -0.886064 | 4.73E-72 | -1.69E-46 |
| MS.gene050820 | MS.gene069868 | -0.847467 | 1.14E-59 | -1.69E-46 |
| MS.gene050826 | MS.gene069868 | -0.83493 | 2.25E-56 | -1.69E-46 |
| MS.gene050953 | MS.gene069868 | -0.820642 | 6.16E-53 | -1.69E-46 |
| MS.gene05119 | MS.gene069868 | 0.823413 | 1.40E-53 | -1.69E-46 |
| MS.gene051210 | MS.gene069868 | -0.832598 | 8.63E-56 | -1.69E-46 |
| MS.gene051265 | MS.gene069868 | -0.823058 | 1.70E-53 | -1.69E-46 |
| MS.gene051568 | MS.gene069868 | -0.8498 | 2.56E-60 | -1.69E-46 |
| MS.gene051860 | MS.gene069868 | -0.838743 | 2.40E-57 | -1.69E-46 |
| MS.gene051924 | MS.gene069868 | 0.812992 | 3.21E-51 | -1.69E-46 |
| MS.gene051935 | MS.gene069868 | -0.830405 | 2.99E-55 | -1.69E-46 |
| MS.gene051983 | MS.gene069868 | -0.814007 | 1.92E-51 | -1.69E-46 |
| MS.gene052011 | MS.gene069868 | 0.827781 | 1.29E-54 | -1.69E-46 |
| MS.gene052042 | MS.gene069868 | -0.823765 | 1.16E-53 | -1.69E-46 |
| MS.gene052056 | MS.gene069868 | 0.812083 | 5.07E-51 | -1.69E-46 |
| MS.gene052176 | MS.gene069868 | -0.827714 | 1.34E-54 | -1.69E-46 |
| MS.gene052190 | MS.gene069868 | -0.828152 | 1.05E-54 | -1.69E-46 |
| MS.gene052323 | MS.gene069868 | -0.809438 | 1.89E-50 | -1.69E-46 |
| MS.gene052333 | MS.gene069868 | -0.852433 | 4.63E-61 | -1.69E-46 |
| MS.gene052358 | MS.gene069868 | 0.816417 | 5.59E-52 | -1.69E-46 |
| MS.gene052361 | MS.gene069868 | 0.808948 | 2.41E-50 | -1.69E-46 |
| MS.gene052384 | MS.gene069868 | -0.816202 | 6.24E-52 | -1.69E-46 |
| MS.gene052389 | MS.gene069868 | -0.853917 | 1.74E-61 | -1.69E-46 |
| MS.gene052586 | MS.gene069868 | -0.807723 | 4.40E-50 | -1.69E-46 |
| MS.gene052673 | MS.gene069868 | 0.808225 | 3.44E-50 | -1.69E-46 |
| MS.gene052896 | MS.gene069868 | -0.815622 | 8.41E-52 | -1.69E-46 |
| MS.gene053054 | MS.gene069868 | 0.841555 | 4.43E-58 | -1.69E-46 |
| MS.gene053147 | MS.gene069868 | -0.855904 | 4.61E-62 | -1.69E-46 |
| MS.gene053166 | MS.gene069868 | -0.828816 | 7.28E-55 | -1.69E-46 |
| MS.gene053221 | MS.gene069868 | -0.827336 | 1.66E-54 | -1.69E-46 |
| MS.gene053584 | MS.gene069868 | -0.820601 | 6.29E-53 | -1.69E-46 |
| MS.gene053641 | MS.gene069868 | -0.801378 | 9.26E-49 | -1.69E-46 |
| MS.gene053811 | MS.gene069868 | -0.841052 | 6.00E-58 | -1.69E-46 |
| MS.gene053836 | MS.gene069868 | -0.823793 | 1.14E-53 | -1.69E-46 |
| MS.gene05414 | MS.gene069868 | -0.827742 | 1.32E-54 | -1.69E-46 |
| MS.gene05415 | MS.gene069868 | -0.828656 | 7.97E-55 | -1.69E-46 |
| MS.gene05417 | MS.gene069868 | -0.805382 | 1.37E-49 | -1.69E-46 |
| MS.gene054183 | MS.gene069868 | -0.840507 | 8.34E-58 | -1.69E-46 |
| MS.gene054236 | MS.gene069868 | -0.813952 | 1.97E-51 | -1.69E-46 |
| MS.gene054291 | MS.gene069868 | 0.892697 | 1.25E-74 | -1.69E-46 |
| MS.gene054379 | MS.gene069868 | -0.84086 | 6.74E-58 | -1.69E-46 |
| MS.gene054405 | MS.gene069868 | -0.813094 | 3.05E-51 | -1.69E-46 |
| MS.gene054467 | MS.gene069868 | -0.882303 | 1.17E-70 | -1.69E-46 |
| MS.gene054468 | MS.gene069868 | -0.920636 | 9.96E-88 | -1.69E-46 |
| MS.gene054473 | MS.gene069868 | -0.822745 | 2.01E-53 | -1.69E-46 |
| MS.gene054559 | MS.gene069868 | -0.812271 | 4.61E-51 | -1.69E-46 |
| MS.gene054581 | MS.gene069868 | -0.84916 | 3.86E-60 | -1.69E-46 |
| MS.gene05468 | MS.gene069868 | -0.830386 | 3.02E-55 | -1.69E-46 |
| MS.gene054826 | MS.gene069868 | -0.862009 | 6.86E-64 | -1.69E-46 |
| MS.gene054930 | MS.gene069868 | -0.849093 | 4.03E-60 | -1.69E-46 |
| MS.gene055227 | MS.gene069868 | -0.801829 | 7.48E-49 | -1.69E-46 |
| MS.gene055356 | MS.gene069868 | -0.85026 | 1.91E-60 | -1.69E-46 |
| MS.gene055357 | MS.gene069868 | -0.824264 | 8.87E-54 | -1.69E-46 |
| MS.gene055358 | MS.gene069868 | -0.855312 | 6.86E-62 | -1.69E-46 |
| MS.gene055367 | MS.gene069868 | -0.803685 | 3.10E-49 | -1.69E-46 |
| MS.gene055701 | MS.gene069868 | -0.863281 | 2.78E-64 | -1.69E-46 |
| MS.gene055818 | MS.gene069868 | -0.833602 | 4.85E-56 | -1.69E-46 |
| MS.gene055926 | MS.gene069868 | -0.808255 | 3.39E-50 | -1.69E-46 |
| MS.gene05595 | MS.gene069868 | -0.844286 | 8.31E-59 | -1.69E-46 |
| MS.gene05604 | MS.gene069868 | -0.814411 | 1.56E-51 | -1.69E-46 |
| MS.gene056297 | MS.gene069868 | -0.805886 | 1.07E-49 | -1.69E-46 |
| MS.gene056506 | MS.gene069868 | -0.845428 | 4.09E-59 | -1.69E-46 |
| MS.gene056723 | MS.gene069868 | -0.811337 | 7.36E-51 | -1.69E-46 |
| MS.gene056779 | MS.gene069868 | -0.805546 | 1.27E-49 | -1.69E-46 |
| MS.gene056873 | MS.gene069868 | -0.802486 | 5.48E-49 | -1.69E-46 |
| MS.gene056979 | MS.gene069868 | -0.818068 | 2.38E-52 | -1.69E-46 |
| MS.gene057012 | MS.gene069868 | -0.821062 | 4.93E-53 | -1.69E-46 |
| MS.gene057026 | MS.gene069868 | -0.846941 | 1.58E-59 | -1.69E-46 |
| MS.gene057156 | MS.gene069868 | 0.804069 | 2.58E-49 | -1.69E-46 |
| MS.gene057194 | MS.gene069868 | -0.813149 | 2.96E-51 | -1.69E-46 |
| MS.gene057200 | MS.gene069868 | -0.803658 | 3.14E-49 | -1.69E-46 |
| MS.gene057469 | MS.gene069868 | -0.865863 | 4.34E-65 | -1.69E-46 |
| MS.gene05761 | MS.gene069868 | -0.852917 | 3.37E-61 | -1.69E-46 |
| MS.gene058139 | MS.gene069868 | -0.819757 | 9.82E-53 | -1.69E-46 |
| MS.gene058146 | MS.gene069868 | -0.812721 | 3.68E-51 | -1.69E-46 |
| MS.gene058220 | MS.gene069868 | -0.836224 | 1.06E-56 | -1.69E-46 |
| MS.gene058710 | MS.gene069868 | -0.815642 | 8.33E-52 | -1.69E-46 |
| MS.gene05872 | MS.gene069868 | -0.819021 | 1.45E-52 | -1.69E-46 |
| MS.gene058739 | MS.gene069868 | -0.828446 | 8.95E-55 | -1.69E-46 |
| MS.gene058935 | MS.gene069868 | -0.807718 | 4.41E-50 | -1.69E-46 |
| MS.gene059128 | MS.gene069868 | -0.831092 | 2.03E-55 | -1.69E-46 |
| MS.gene059161 | MS.gene069868 | -0.834481 | 2.92E-56 | -1.69E-46 |
| MS.gene059609 | MS.gene069868 | -0.836773 | 7.69E-57 | -1.69E-46 |
| MS.gene059664 | MS.gene069868 | -0.841361 | 4.98E-58 | -1.69E-46 |
| MS.gene059789 | MS.gene069868 | -0.813249 | 2.82E-51 | -1.69E-46 |
| MS.gene060011 | MS.gene069868 | -0.80375 | 3.00E-49 | -1.69E-46 |
| MS.gene060122 | MS.gene069868 | 0.819112 | 1.38E-52 | -1.69E-46 |
| MS.gene060137 | MS.gene069868 | 0.858979 | 5.68E-63 | -1.69E-46 |
| MS.gene060322 | MS.gene069868 | -0.85761 | 1.45E-62 | -1.69E-46 |
| MS.gene060373 | MS.gene069868 | -0.821667 | 3.57E-53 | -1.69E-46 |
| MS.gene060404 | MS.gene069868 | -0.806009 | 1.01E-49 | -1.69E-46 |
| MS.gene060480 | MS.gene069868 | -0.817663 | 2.93E-52 | -1.69E-46 |
| MS.gene06052 | MS.gene069868 | -0.830478 | 2.87E-55 | -1.69E-46 |
| MS.gene060572 | MS.gene069868 | -0.805892 | 1.07E-49 | -1.69E-46 |
| MS.gene060634 | MS.gene069868 | 0.823061 | 1.70E-53 | -1.69E-46 |
| MS.gene060683 | MS.gene069868 | -0.842442 | 2.58E-58 | -1.69E-46 |
| MS.gene060685 | MS.gene069868 | -0.84334 | 1.49E-58 | -1.69E-46 |
| MS.gene060802 | MS.gene069868 | -0.837627 | 4.65E-57 | -1.69E-46 |
| MS.gene060803 | MS.gene069868 | -0.825851 | 3.74E-54 | -1.69E-46 |
| MS.gene060998 | MS.gene069868 | -0.825916 | 3.61E-54 | -1.69E-46 |
| MS.gene061040 | MS.gene069868 | 0.852946 | 3.31E-61 | -1.69E-46 |
| MS.gene061114 | MS.gene069868 | 0.857208 | 1.91E-62 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene069868.t1 | MTR_2g101270 | 97.879 | 330 | 7 | 0 | 1 | 330 | 1 | 330 | 0.0 | 659 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene069868.t1 | AT3G16310 | 69.277 | 332 | 97 | 3 | 1 | 330 | 1 | 329 | 5.79e-166 | 465 |
Find 103 sgRNAs with CRISPR-Local
Find 292 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCTCCAAATGATACTAATT+TGG | 0.190381 | 2.1:-3832153 | MS.gene069868:CDS |
| GAAGAATGGGTAACAGTATA+TGG | 0.215069 | 2.1:-3834338 | MS.gene069868:CDS |
| ATTAATGGAGTCCTAATTAT+TGG | 0.241844 | 2.1:-3831734 | MS.gene069868:CDS |
| GGAGTCGAAAATTCTCTATT+TGG | 0.255914 | 2.1:+3834611 | None:intergenic |
| ACTTCAGGCCTTGCCACTTC+TGG | 0.276867 | 2.1:+3834398 | None:intergenic |
| AAAATTCTCTATTTGGAGTT+TGG | 0.279174 | 2.1:+3834618 | None:intergenic |
| TTTCCCCGGCGGGCATTAAC+AGG | 0.283319 | 2.1:+3834821 | None:intergenic |
| TGTTCACCACCACTCTTTGC+AGG | 0.284691 | 2.1:+3834494 | None:intergenic |
| AAGAATGGAATACAAATTAA+TGG | 0.309323 | 2.1:-3831749 | MS.gene069868:CDS |
| TTGCCATTCTGCAGATAATA+TGG | 0.320989 | 2.1:+3831584 | None:intergenic |
| AAAACCAAATTAGTATCATT+TGG | 0.323538 | 2.1:+3832149 | None:intergenic |
| AAGGAATTTCGCTGGACTTC+AGG | 0.331878 | 2.1:+3834383 | None:intergenic |
| TCCTTGATTGTTAAGCCTTT+CGG | 0.335228 | 2.1:+3831673 | None:intergenic |
| GCTTCGGACTTGCCTTTCGC+TGG | 0.345748 | 2.1:+3834590 | None:intergenic |
| AGGGTTTCACACCAATAATT+AGG | 0.353677 | 2.1:+3831723 | None:intergenic |
| TAATCCAGTATGCCTGATTC+TGG | 0.358857 | 2.1:+3834683 | None:intergenic |
| TTCTCCAGAATCAGGCATAC+TGG | 0.373999 | 2.1:-3834687 | MS.gene069868:CDS |
| TACTTCTGGGTGCCTGGCAG+TGG | 0.374416 | 2.1:+3831631 | None:intergenic |
| TCAAACTAAGCGAGCCTTGT+TGG | 0.381381 | 2.1:+3834531 | None:intergenic |
| GCGTGAAAACTTTGGTAATT+CGG | 0.395948 | 2.1:-3834756 | MS.gene069868:CDS |
| GGCCTTGCCACTTCTGGTGG+TGG | 0.396977 | 2.1:+3834404 | None:intergenic |
| AAGGCTCGCTTAGTTTGAAT+TGG | 0.399188 | 2.1:-3834526 | MS.gene069868:CDS |
| TGTGCTTACTTCTGGGTGCC+TGG | 0.400037 | 2.1:+3831625 | None:intergenic |
| CCTGGCAGTGGGTAGAGGTA+AGG | 0.403276 | 2.1:+3831643 | None:intergenic |
| AGCACATCTTATGCTTTAAG+AGG | 0.412178 | 2.1:-3834566 | MS.gene069868:CDS |
| GAAATCTTAATGAGGAAGAA+TGG | 0.412872 | 2.1:-3834352 | MS.gene069868:CDS |
| GCACATCAAAAGCTCCTTCT+CGG | 0.416892 | 2.1:-3831607 | MS.gene069868:CDS |
| CAGGAGCATCTTCTTCTCTA+TGG | 0.417616 | 2.1:-3834778 | MS.gene069868:CDS |
| GGGTGCCTGGCAGTGGGTAG+AGG | 0.423344 | 2.1:+3831638 | None:intergenic |
| CTGGCCCTAGAGATGCTAAC+TGG | 0.425172 | 2.1:-3832085 | MS.gene069868:CDS |
| TGCTCCTGACTGGCTTGGAC+TGG | 0.428965 | 2.1:+3834793 | None:intergenic |
| ACCGAAAGGCTTAACAATCA+AGG | 0.430735 | 2.1:-3831674 | MS.gene069868:CDS |
| ACTTAGTCTCAGGAGACATT+TGG | 0.432323 | 2.1:+3834660 | None:intergenic |
| AGCATAAGATGTGCTGGCTT+CGG | 0.432389 | 2.1:+3834574 | None:intergenic |
| TCTCTATGGCGTGAAAACTT+TGG | 0.434782 | 2.1:-3834764 | MS.gene069868:CDS |
| TTCTCTATTTGGAGTTTGGA+TGG | 0.437107 | 2.1:+3834622 | None:intergenic |
| CTTGCCACTTCTGGTGGTGG+AGG | 0.448887 | 2.1:+3834407 | None:intergenic |
| GGTCAAAGCTTGACGTTGCA+TGG | 0.453671 | 2.1:+3831694 | None:intergenic |
| GCTCGCTTAGTTTGAATTGG+TGG | 0.454126 | 2.1:-3834523 | MS.gene069868:CDS |
| CAAAATGCTCTCAACAAGAA+TGG | 0.460346 | 2.1:-3831764 | MS.gene069868:CDS |
| GTCGAGGGTGTGGTTCAGCC+TGG | 0.461947 | 2.1:-3834446 | MS.gene069868:CDS |
| GGCTGAACCACACCCTCGAC+TGG | 0.463862 | 2.1:+3834449 | None:intergenic |
| TTATTGTCTGACTTAGTCTC+AGG | 0.468844 | 2.1:+3834650 | None:intergenic |
| GTCCATGATCTTGGATGCTA+AGG | 0.469908 | 2.1:+3831514 | None:intergenic |
| ATCCTTAGCATCCAAGATCA+TGG | 0.475742 | 2.1:-3831516 | MS.gene069868:CDS |
| ATTAAGATTTCCTGCAGGTA+AGG | 0.475811 | 2.1:+3834364 | None:intergenic |
| GTGAACAAGAGGAGAAAGGA+AGG | 0.476290 | 2.1:-3834478 | MS.gene069868:CDS |
| AATTATTGGTGTGAAACCCT+TGG | 0.478180 | 2.1:-3831720 | MS.gene069868:CDS |
| ATCCCCTGTTAATGCCCGCC+GGG | 0.480958 | 2.1:-3834825 | MS.gene069868:CDS |
| AAATCTTAATGAGGAAGAAT+GGG | 0.484177 | 2.1:-3834351 | MS.gene069868:CDS |
| AAACATCAAGTCCATGATCT+TGG | 0.488113 | 2.1:+3831505 | None:intergenic |
| GAAGATGCTCCTGACTGGCT+TGG | 0.495482 | 2.1:+3834788 | None:intergenic |
| GGTGGTGAACAAGAGGAGAA+AGG | 0.505138 | 2.1:-3834482 | MS.gene069868:CDS |
| TCAGGCCTTGCCACTTCTGG+TGG | 0.505586 | 2.1:+3834401 | None:intergenic |
| ACTTCTGGGTGCCTGGCAGT+GGG | 0.506491 | 2.1:+3831632 | None:intergenic |
| CAGTTAGCATCTCTAGGGCC+AGG | 0.509660 | 2.1:+3832086 | None:intergenic |
| GCGCAAAGAACTCCTAGGTC+TGG | 0.511122 | 2.1:-3834878 | MS.gene069868:CDS |
| AAGAATGGGTAACAGTATAT+GGG | 0.512808 | 2.1:-3834337 | MS.gene069868:intron |
| TTGACGTTGCATGGGATCCA+AGG | 0.518509 | 2.1:+3831703 | None:intergenic |
| TCTTAAAGCATAAGATGTGC+TGG | 0.519255 | 2.1:+3834568 | None:intergenic |
| CTGCAGGTAAGGAATTTCGC+TGG | 0.519335 | 2.1:+3834375 | None:intergenic |
| CATCCCCTGTTAATGCCCGC+CGG | 0.522742 | 2.1:-3834826 | MS.gene069868:CDS |
| AATGCAACTGCAAGGCAGAC+TGG | 0.522955 | 2.1:-3831563 | MS.gene069868:CDS |
| GTCAAAGCTTGACGTTGCAT+GGG | 0.523353 | 2.1:+3831695 | None:intergenic |
| GAGAAGAAGATGCTCCTGAC+TGG | 0.526749 | 2.1:+3834783 | None:intergenic |
| CCTTACCTCTACCCACTGCC+AGG | 0.527907 | 2.1:-3831643 | MS.gene069868:CDS |
| TCTCTATTTGGAGTTTGGAT+GGG | 0.529308 | 2.1:+3834623 | None:intergenic |
| TCCTCATTAAGATTTCCTGC+AGG | 0.533575 | 2.1:+3834359 | None:intergenic |
| CAGCGAAATTCCTTACCTGC+AGG | 0.534512 | 2.1:-3834374 | MS.gene069868:CDS |
| AACGTCAAGCTTTGACCGAA+AGG | 0.536916 | 2.1:-3831688 | MS.gene069868:CDS |
| GGGTTCTCCAGTCGAGGGTG+TGG | 0.537698 | 2.1:-3834456 | MS.gene069868:CDS |
| CCACAGCGCAAAGAACTCCT+AGG | 0.538182 | 2.1:-3834883 | MS.gene069868:CDS |
| TGCAGATAATATGGCCGAGA+AGG | 0.543834 | 2.1:+3831593 | None:intergenic |
| ACTGGAAAACTTTCCCCGGC+GGG | 0.548506 | 2.1:+3834811 | None:intergenic |
| GCACATCTTATGCTTTAAGA+GGG | 0.552808 | 2.1:-3834565 | MS.gene069868:CDS |
| CGGCCATATTATCTGCAGAA+TGG | 0.555153 | 2.1:-3831587 | MS.gene069868:CDS |
| TCTTCCTCCACCACCAGAAG+TGG | 0.556002 | 2.1:-3834411 | MS.gene069868:CDS |
| CTGGCAGTGGGTAGAGGTAA+GGG | 0.559275 | 2.1:+3831644 | None:intergenic |
| TTGGACTGGAAAACTTTCCC+CGG | 0.559593 | 2.1:+3834807 | None:intergenic |
| TGCATCCAGTTAGCATCTCT+AGG | 0.560762 | 2.1:+3832080 | None:intergenic |
| TTCCCCGGCGGGCATTAACA+GGG | 0.567742 | 2.1:+3834822 | None:intergenic |
| TGACGTTGCATGGGATCCAA+GGG | 0.567770 | 2.1:+3831704 | None:intergenic |
| AAAGTCTGATCTATCTTCCA+AGG | 0.574341 | 2.1:+3834709 | None:intergenic |
| AGGAAGGGGTTCTCCAGTCG+AGG | 0.579447 | 2.1:-3834462 | MS.gene069868:CDS |
| ACCTGCAGGAAATCTTAATG+AGG | 0.582251 | 2.1:-3834360 | MS.gene069868:CDS |
| TCCCCGGCGGGCATTAACAG+GGG | 0.586228 | 2.1:+3834823 | None:intergenic |
| GAACAAGAGGAGAAAGGAAG+GGG | 0.588864 | 2.1:-3834476 | MS.gene069868:CDS |
| CTCCACCACCAGAAGTGGCA+AGG | 0.589454 | 2.1:-3834406 | MS.gene069868:CDS |
| TGAACAAGAGGAGAAAGGAA+GGG | 0.599791 | 2.1:-3834477 | MS.gene069868:CDS |
| GCATCCAGTTAGCATCTCTA+GGG | 0.606367 | 2.1:+3832081 | None:intergenic |
| AAAGAGTGGTGGTGAACAAG+AGG | 0.606401 | 2.1:-3834489 | MS.gene069868:CDS |
| CCTAGGAGTTCTTTGCGCTG+TGG | 0.609099 | 2.1:+3834883 | None:intergenic |
| GGAAGAGTAATCAATGCACC+AGG | 0.629675 | 2.1:+3834428 | None:intergenic |
| GACTGGAAAACTTTCCCCGG+CGG | 0.634463 | 2.1:+3834810 | None:intergenic |
| CACATCTTATGCTTTAAGAG+GGG | 0.638647 | 2.1:-3834564 | MS.gene069868:CDS |
| AGTGACTGTCTACCAGACCT+AGG | 0.639843 | 2.1:+3834866 | None:intergenic |
| AGAATGGCAATGCAACTGCA+AGG | 0.651500 | 2.1:-3831571 | MS.gene069868:CDS |
| TCCCCTGTTAATGCCCGCCG+GGG | 0.661914 | 2.1:-3834824 | MS.gene069868:CDS |
| GGAAGGGGTTCTCCAGTCGA+GGG | 0.662892 | 2.1:-3834461 | MS.gene069868:CDS |
| GGGGTGCAGCAAAACCAACA+AGG | 0.670858 | 2.1:-3834545 | MS.gene069868:CDS |
| TGGTCGTCACCTGCAAAGAG+TGG | 0.678630 | 2.1:-3834503 | MS.gene069868:CDS |
| TCGTCACCTGCAAAGAGTGG+TGG | 0.691867 | 2.1:-3834500 | MS.gene069868:CDS |
| GCAACTGCAAGGCAGACTGG+AGG | 0.718127 | 2.1:-3831560 | MS.gene069868:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | GATTATACATTAAAAATAAA+AGG | + | chr2.1:3833854-3833873 | None:intergenic | 10.0% |
| !!! | AATTTTAAAAGAAAAAACAT+TGG | + | chr2.1:3834481-3834500 | None:intergenic | 10.0% |
| !! | AGAATTAAATCAAAACAAAA+TGG | + | chr2.1:3832467-3832486 | None:intergenic | 15.0% |
| !! | ATATTATTATCATCTTGAAT+GGG | - | chr2.1:3833682-3833701 | MS.gene069868:intron | 15.0% |
| !! | TATATTATTATCATCTTGAA+TGG | - | chr2.1:3833681-3833700 | MS.gene069868:intron | 15.0% |
| !!! | AACTTCTTTTTTTTATTTAG+TGG | + | chr2.1:3832253-3832272 | None:intergenic | 15.0% |
| !!! | AATTTTTCTTTATAAAGCAA+TGG | - | chr2.1:3834378-3834397 | MS.gene069868:CDS | 15.0% |
| !!! | ATTAAACATTTTAATCGTAA+GGG | - | chr2.1:3833324-3833343 | MS.gene069868:intron | 15.0% |
| !!! | TTTGTTTAAATAGACTTTTT+GGG | - | chr2.1:3833616-3833635 | MS.gene069868:intron | 15.0% |
| !!! | TTTTCAGTTTGTTTATTTTT+AGG | - | chr2.1:3833039-3833058 | MS.gene069868:intron | 15.0% |
| !!! | TTTTGTTTAAATAGACTTTT+TGG | - | chr2.1:3833615-3833634 | MS.gene069868:intron | 15.0% |
| !! | AAAACCAAATTAGTATCATT+TGG | + | chr2.1:3834240-3834259 | None:intergenic | 20.0% |
| !! | AAGAATGGAATACAAATTAA+TGG | - | chr2.1:3834637-3834656 | MS.gene069868:CDS | 20.0% |
| !! | ACATTGGAAATATTGATAAA+AGG | + | chr2.1:3834465-3834484 | None:intergenic | 20.0% |
| !! | ACGATTAAAATGTTTAATGT+TGG | + | chr2.1:3833322-3833341 | None:intergenic | 20.0% |
| !! | ATTGTTAATCCCTTATTATT+CGG | + | chr2.1:3833444-3833463 | None:intergenic | 20.0% |
| !! | TAATCATATATACTCTTGAA+TGG | + | chr2.1:3834163-3834182 | None:intergenic | 20.0% |
| !! | TCAAGAATAATTGTCTAAAA+GGG | - | chr2.1:3832639-3832658 | MS.gene069868:intron | 20.0% |
| !!! | AAAAATCTAAACCATTTTAG+CGG | + | chr2.1:3833588-3833607 | None:intergenic | 20.0% |
| !!! | AACTTGAAACTTTTAAACAT+AGG | + | chr2.1:3833116-3833135 | None:intergenic | 20.0% |
| !!! | AATTTGTATTTTGTAGGAAA+AGG | + | chr2.1:3833743-3833762 | None:intergenic | 20.0% |
| !!! | ATGATACTAATTTGGTTTTA+AGG | - | chr2.1:3834241-3834260 | MS.gene069868:intron | 20.0% |
| !!! | CATTAAACATTTTAATCGTA+AGG | - | chr2.1:3833323-3833342 | MS.gene069868:intron | 20.0% |
| !!! | CCACTTTAAAACTATTTATA+AGG | - | chr2.1:3832137-3832156 | MS.gene069868:CDS | 20.0% |
| !!! | CCTTATAAATAGTTTTAAAG+TGG | + | chr2.1:3832140-3832159 | None:intergenic | 20.0% |
| !!! | GATTTGTCAATTTTATAGAA+TGG | - | chr2.1:3833493-3833512 | MS.gene069868:intron | 20.0% |
| !!! | TATGTTTAAAAGTTTCAAGT+TGG | - | chr2.1:3833115-3833134 | MS.gene069868:intron | 20.0% |
| !!! | TGATACTAATTTGGTTTTAA+GGG | - | chr2.1:3834242-3834261 | MS.gene069868:intron | 20.0% |
| ! | AAATACCGCTTTATATTTGT+TGG | - | chr2.1:3833969-3833988 | MS.gene069868:intron | 25.0% |
| ! | AAATCTTAATGAGGAAGAAT+GGG | - | chr2.1:3832035-3832054 | MS.gene069868:intron | 25.0% |
| ! | AATACACATAGATTGTTAGT+TGG | + | chr2.1:3833817-3833836 | None:intergenic | 25.0% |
| ! | AGAGCATAAAGAAACATAAA+TGG | + | chr2.1:3832979-3832998 | None:intergenic | 25.0% |
| ! | AGTGATAATTCTCAAAACTT+TGG | + | chr2.1:3832555-3832574 | None:intergenic | 25.0% |
| ! | ATACACATAGATTGTTAGTT+GGG | + | chr2.1:3833816-3833835 | None:intergenic | 25.0% |
| ! | ATGTAATAGGTATATAGGTT+GGG | - | chr2.1:3832684-3832703 | MS.gene069868:intron | 25.0% |
| ! | ATTAATGGAGTCCTAATTAT+TGG | - | chr2.1:3834652-3834671 | MS.gene069868:CDS | 25.0% |
| ! | ATTGTAATGTTAGTAACGTT+CGG | + | chr2.1:3833143-3833162 | None:intergenic | 25.0% |
| ! | ATTTATGTTTCTTTATGCTC+TGG | - | chr2.1:3832978-3832997 | MS.gene069868:intron | 25.0% |
| ! | CTCAAGAATAATTGTCTAAA+AGG | - | chr2.1:3832638-3832657 | MS.gene069868:intron | 25.0% |
| ! | CTGATATATTAAGAATTGAG+AGG | - | chr2.1:3832573-3832592 | MS.gene069868:intron | 25.0% |
| ! | GAAACCTAAAATAAACGTAA+GGG | + | chr2.1:3833083-3833102 | None:intergenic | 25.0% |
| ! | GTAAAATGTACCATATTTCT+AGG | + | chr2.1:3832169-3832188 | None:intergenic | 25.0% |
| ! | TCTACTTTAGCATTTACATT+TGG | - | chr2.1:3832084-3832103 | MS.gene069868:CDS | 25.0% |
| ! | TCTGAATTTCCGAATAATAA+GGG | - | chr2.1:3833432-3833451 | MS.gene069868:intron | 25.0% |
| ! | TGAAACCTAAAATAAACGTA+AGG | + | chr2.1:3833084-3833103 | None:intergenic | 25.0% |
| ! | TTCTCCAAATGATACTAATT+TGG | - | chr2.1:3834233-3834252 | MS.gene069868:intron | 25.0% |
| ! | TTCTGAATTTCCGAATAATA+AGG | - | chr2.1:3833431-3833450 | MS.gene069868:intron | 25.0% |
| ! | TTTATGTTTCTTTATGCTCT+GGG | - | chr2.1:3832979-3832998 | MS.gene069868:intron | 25.0% |
| !! | AAAATTCTCTATTTGGAGTT+TGG | + | chr2.1:3831771-3831790 | None:intergenic | 25.0% |
| !! | AATAATCAAGAGCATAATGA+GGG | - | chr2.1:3832857-3832876 | MS.gene069868:intron | 25.0% |
| !! | TTTAGGTTTAATTGCATGAT+TGG | - | chr2.1:3833056-3833075 | MS.gene069868:intron | 25.0% |
| !!! | ATTTTTAGAAGCATGTACAT+TGG | + | chr2.1:3834195-3834214 | None:intergenic | 25.0% |
| !!! | GTTTATTTTAGGTTTCAAGT+TGG | - | chr2.1:3833087-3833106 | MS.gene069868:intron | 25.0% |
| AAACCTAAAGTAAACGTTAG+GGG | - | chr2.1:3833356-3833375 | MS.gene069868:intron | 30.0% | |
| AAGAATGGGTAACAGTATAT+GGG | - | chr2.1:3832049-3832068 | MS.gene069868:intron | 30.0% | |
| AAGGATTTGTCCTAGAAATA+TGG | - | chr2.1:3832156-3832175 | MS.gene069868:CDS | 30.0% | |
| AATCATAGTATTCAAGCAAG+AGG | + | chr2.1:3834357-3834376 | None:intergenic | 30.0% | |
| ACACTACTATCATTCCTTAT+CGG | + | chr2.1:3832114-3832133 | None:intergenic | 30.0% | |
| ACCTTCCAACAAATATAAAG+CGG | + | chr2.1:3833977-3833996 | None:intergenic | 30.0% | |
| AGAATAATTGTCTAAAAGGG+TGG | - | chr2.1:3832642-3832661 | MS.gene069868:intron | 30.0% | |
| AGAGTTAACTCAAAATTCGA+CGG | - | chr2.1:3833258-3833277 | MS.gene069868:intron | 30.0% | |
| ATAAGGCTAAATTGCATGTT+TGG | + | chr2.1:3833383-3833402 | None:intergenic | 30.0% | |
| ATAGATAATTGATTGTGCTG+AGG | - | chr2.1:3834107-3834126 | MS.gene069868:intron | 30.0% | |
| ATCTATGTGTATTGTTTCCA+AGG | - | chr2.1:3833824-3833843 | MS.gene069868:intron | 30.0% | |
| ATTAGGACATTATCTTAGAG+GGG | + | chr2.1:3832944-3832963 | None:intergenic | 30.0% | |
| ATTTCCATCCATGATGTAAT+AGG | - | chr2.1:3832671-3832690 | MS.gene069868:intron | 30.0% | |
| CATTAGGACATTATCTTAGA+GGG | + | chr2.1:3832945-3832964 | None:intergenic | 30.0% | |
| CCATGATGTAATAGGTATAT+AGG | - | chr2.1:3832679-3832698 | MS.gene069868:intron | 30.0% | |
| CCTATATACCTATTACATCA+TGG | + | chr2.1:3832682-3832701 | None:intergenic | 30.0% | |
| GAAACCTAAAGTAAACGTTA+GGG | - | chr2.1:3833355-3833374 | MS.gene069868:intron | 30.0% | |
| GAAATCTTAATGAGGAAGAA+TGG | - | chr2.1:3832034-3832053 | MS.gene069868:intron | 30.0% | |
| GAGGTAATCAGTTAGAATAT+TGG | - | chr2.1:3832592-3832611 | MS.gene069868:intron | 30.0% | |
| GATGTAATAGGTATATAGGT+TGG | - | chr2.1:3832683-3832702 | MS.gene069868:intron | 30.0% | |
| GCACTACTAAATACATTTCT+TGG | - | chr2.1:3834576-3834595 | MS.gene069868:CDS | 30.0% | |
| GCTCTTGAATATCTTTGATT+AGG | - | chr2.1:3833896-3833915 | MS.gene069868:intron | 30.0% | |
| GTAGCTGCAAAAAGTTTAAT+AGG | + | chr2.1:3833922-3833941 | None:intergenic | 30.0% | |
| GTTAGAATATTGGCAAAGTT+TGG | - | chr2.1:3832602-3832621 | MS.gene069868:intron | 30.0% | |
| TAAAAATAAAAGGTTGCCCT+TGG | + | chr2.1:3833844-3833863 | None:intergenic | 30.0% | |
| TAAGGGATTAACAATACCTA+TGG | - | chr2.1:3833449-3833468 | MS.gene069868:intron | 30.0% | |
| TAGATAATTGATTGTGCTGA+GGG | - | chr2.1:3834108-3834127 | MS.gene069868:intron | 30.0% | |
| TATACCTATTACATCATGGA+TGG | + | chr2.1:3832678-3832697 | None:intergenic | 30.0% | |
| TCATACACAATCACATATGT+TGG | - | chr2.1:3832409-3832428 | MS.gene069868:intron | 30.0% | |
| TCTATGTGTATTGTTTCCAA+GGG | - | chr2.1:3833825-3833844 | MS.gene069868:intron | 30.0% | |
| TGAAACCTAAAGTAAACGTT+AGG | - | chr2.1:3833354-3833373 | MS.gene069868:intron | 30.0% | |
| TTAAGGGAGTTTGAAAAATG+TGG | - | chr2.1:3834258-3834277 | MS.gene069868:intron | 30.0% | |
| TTGTAATGTTAGTAACGTTC+GGG | + | chr2.1:3833142-3833161 | None:intergenic | 30.0% | |
| ! | AAAACATTTGATTTCAGCAG+AGG | - | chr2.1:3832512-3832531 | MS.gene069868:intron | 30.0% |
| ! | AATCATTTTGTATCCGTTGA+TGG | + | chr2.1:3833769-3833788 | None:intergenic | 30.0% |
| ! | ATCATTTTGTATCCGTTGAT+GGG | + | chr2.1:3833768-3833787 | None:intergenic | 30.0% |
| ! | CAGTGTACTTGCTAAAAATA+AGG | + | chr2.1:3833400-3833419 | None:intergenic | 30.0% |
| ! | GAATAATCAAGAGCATAATG+AGG | - | chr2.1:3832856-3832875 | MS.gene069868:intron | 30.0% |
| ! | GTATAATCTTGTGAAGCTTT+TGG | - | chr2.1:3833866-3833885 | MS.gene069868:intron | 30.0% |
| ! | GTTTACTTTAGGTTTCAAAC+TGG | + | chr2.1:3833351-3833370 | None:intergenic | 30.0% |
| ! | TATTCACCACTTCTCTAAAA+AGG | + | chr2.1:3834004-3834023 | None:intergenic | 30.0% |
| ! | TGTCAATTTTATAGAATGGC+TGG | - | chr2.1:3833497-3833516 | MS.gene069868:intron | 30.0% |
| ! | TTACATTTGGTTTACCGATA+AGG | - | chr2.1:3832097-3832116 | MS.gene069868:CDS | 30.0% |
| !! | CTCTAAGATAATGTCCTAAT+GGG | - | chr2.1:3832944-3832963 | MS.gene069868:intron | 30.0% |
| !! | TAGACAAAACAAGAAGTACT+CGG | - | chr2.1:3832892-3832911 | MS.gene069868:intron | 30.0% |
| !! | TTTTGTTTAAAACGTCCACA+TGG | - | chr2.1:3833185-3833204 | MS.gene069868:intron | 30.0% |
| !!! | GAAATTTTGAAACATGTTCC+TGG | - | chr2.1:3834282-3834301 | MS.gene069868:intron | 30.0% |
| !!! | TAGACAGTCACTATTTTTTC+AGG | - | chr2.1:3831531-3831550 | MS.gene069868:CDS | 30.0% |
| AAAACCACTTCAGAGTAACA+AGG | + | chr2.1:3834518-3834537 | None:intergenic | 35.0% | |
| AAACATCAAGTCCATGATCT+TGG | + | chr2.1:3834884-3834903 | None:intergenic | 35.0% | |
| AAAGTCTGATCTATCTTCCA+AGG | + | chr2.1:3831680-3831699 | None:intergenic | 35.0% | |
| AATAAGTTGTGTTGTGCTAC+AGG | + | chr2.1:3832307-3832326 | None:intergenic | 35.0% | |
| AATACAAATTGCCCCATCAA+CGG | - | chr2.1:3833753-3833772 | MS.gene069868:intron | 35.0% | |
| AATGGAAAGTAACACCCATT+AGG | + | chr2.1:3832961-3832980 | None:intergenic | 35.0% | |
| AATGGTTTATTGAATCGGTG+AGG | + | chr2.1:3834137-3834156 | None:intergenic | 35.0% | |
| AATTATTGGTGTGAAACCCT+TGG | - | chr2.1:3834666-3834685 | MS.gene069868:CDS | 35.0% | |
| ACAATACCTATGGCTATGTA+TGG | - | chr2.1:3833459-3833478 | MS.gene069868:intron | 35.0% | |
| ACAATGTCAAAATAGCTGGA+TGG | + | chr2.1:3834433-3834452 | None:intergenic | 35.0% | |
| AGAATATTGGCAAAGTTTGG+TGG | - | chr2.1:3832605-3832624 | MS.gene069868:intron | 35.0% | |
| AGGGTTTCACACCAATAATT+AGG | + | chr2.1:3834666-3834685 | None:intergenic | 35.0% | |
| ATGCTGACATCAGTAACATA+AGG | - | chr2.1:3833294-3833313 | MS.gene069868:intron | 35.0% | |
| ATTAAGATTTCCTGCAGGTA+AGG | + | chr2.1:3832025-3832044 | None:intergenic | 35.0% | |
| ATTGTCTAAAAGGGTGGTAA+TGG | - | chr2.1:3832648-3832667 | MS.gene069868:intron | 35.0% | |
| CAAAATGCTCTCAACAAGAA+TGG | - | chr2.1:3834622-3834641 | MS.gene069868:CDS | 35.0% | |
| CCATTAGGACATTATCTTAG+AGG | + | chr2.1:3832946-3832965 | None:intergenic | 35.0% | |
| CTATCTTCCAAGGTGAAAAA+AGG | + | chr2.1:3831670-3831689 | None:intergenic | 35.0% | |
| GAAGAATGGGTAACAGTATA+TGG | - | chr2.1:3832048-3832067 | MS.gene069868:intron | 35.0% | |
| GACAACAATGTCAAAATAGC+TGG | + | chr2.1:3834437-3834456 | None:intergenic | 35.0% | |
| GCAAAAATCATAGCTAGTTC+CGG | - | chr2.1:3833552-3833571 | MS.gene069868:intron | 35.0% | |
| GGAGTCGAAAATTCTCTATT+TGG | + | chr2.1:3831778-3831797 | None:intergenic | 35.0% | |
| GGCCAAATGGTTTATTGAAT+CGG | + | chr2.1:3834142-3834161 | None:intergenic | 35.0% | |
| GTTAGTTGGGCAAGAAAAAT+GGG | + | chr2.1:3833803-3833822 | None:intergenic | 35.0% | |
| TAACTCAAAATTCGACGGAA+AGG | - | chr2.1:3833263-3833282 | MS.gene069868:intron | 35.0% | |
| TAACTTCCTCTCTGCAAAAA+AGG | + | chr2.1:3832920-3832939 | None:intergenic | 35.0% | |
| TAGTGCATAGCCTAATATCA+GGG | + | chr2.1:3834562-3834581 | None:intergenic | 35.0% | |
| TATACTCTTGAATGGCCAAA+TGG | + | chr2.1:3834155-3834174 | None:intergenic | 35.0% | |
| TCATAGTCGTCTTTACAATC+TGG | + | chr2.1:3832330-3832349 | None:intergenic | 35.0% | |
| TCCTTGATTGTTAAGCCTTT+CGG | + | chr2.1:3834716-3834735 | None:intergenic | 35.0% | |
| TCTTAAAGCATAAGATGTGC+TGG | + | chr2.1:3831821-3831840 | None:intergenic | 35.0% | |
| TGCTGACATCAGTAACATAA+GGG | - | chr2.1:3833295-3833314 | MS.gene069868:intron | 35.0% | |
| TGTTAGTTGGGCAAGAAAAA+TGG | + | chr2.1:3833804-3833823 | None:intergenic | 35.0% | |
| TTATTGTCTGACTTAGTCTC+AGG | + | chr2.1:3831739-3831758 | None:intergenic | 35.0% | |
| TTGCCATTCTGCAGATAATA+TGG | + | chr2.1:3834805-3834824 | None:intergenic | 35.0% | |
| TTGTTAACCACCCTGATATT+AGG | - | chr2.1:3834549-3834568 | MS.gene069868:CDS | 35.0% | |
| ! | ACCGCTTTATATTTGTTGGA+AGG | - | chr2.1:3833973-3833992 | MS.gene069868:intron | 35.0% |
| ! | AGCACATCTTATGCTTTAAG+AGG | - | chr2.1:3831820-3831839 | MS.gene069868:intron | 35.0% |
| ! | CTTTTGATGTGCTTACTTCT+GGG | + | chr2.1:3834771-3834790 | None:intergenic | 35.0% |
| ! | GCGTGAAAACTTTGGTAATT+CGG | - | chr2.1:3831630-3831649 | MS.gene069868:CDS | 35.0% |
| ! | GCTAAAATCATATTTGCTGC+AGG | - | chr2.1:3832783-3832802 | MS.gene069868:intron | 35.0% |
| ! | TAATAGGTATATAGGTTGGG+TGG | - | chr2.1:3832687-3832706 | MS.gene069868:intron | 35.0% |
| ! | TCATTTTGTATCCGTTGATG+GGG | + | chr2.1:3833767-3833786 | None:intergenic | 35.0% |
| ! | TCTCTATTTGGAGTTTGGAT+GGG | + | chr2.1:3831766-3831785 | None:intergenic | 35.0% |
| ! | TGGATGCTAAGGATTTTGTT+GGG | + | chr2.1:3834864-3834883 | None:intergenic | 35.0% |
| ! | TGGGGCAATTTGTATTTTGT+AGG | + | chr2.1:3833749-3833768 | None:intergenic | 35.0% |
| ! | TTCTCTATTTGGAGTTTGGA+TGG | + | chr2.1:3831767-3831786 | None:intergenic | 35.0% |
| ! | TTGGATGCTAAGGATTTTGT+TGG | + | chr2.1:3834865-3834884 | None:intergenic | 35.0% |
| !! | AGACAAAACAAGAAGTACTC+GGG | - | chr2.1:3832893-3832912 | MS.gene069868:intron | 35.0% |
| !! | CACATCTTATGCTTTAAGAG+GGG | - | chr2.1:3831822-3831841 | MS.gene069868:intron | 35.0% |
| !! | CACCGATTCAATAAACCATT+TGG | - | chr2.1:3834137-3834156 | MS.gene069868:intron | 35.0% |
| !! | CCTCTAAGATAATGTCCTAA+TGG | - | chr2.1:3832943-3832962 | MS.gene069868:intron | 35.0% |
| !! | GCACATCTTATGCTTTAAGA+GGG | - | chr2.1:3831821-3831840 | MS.gene069868:intron | 35.0% |
| !! | TGGTCCCTTACGTTTATTTT+AGG | - | chr2.1:3833076-3833095 | MS.gene069868:intron | 35.0% |
| AATTCCTGGTTTAGTGCAGT+AGG | - | chr2.1:3833005-3833024 | MS.gene069868:intron | 40.0% | |
| ACACAATCACATATGTTGGC+AGG | - | chr2.1:3832413-3832432 | MS.gene069868:intron | 40.0% | |
| ACCAATCCATACATAGCCAT+AGG | + | chr2.1:3833468-3833487 | None:intergenic | 40.0% | |
| ACCGAAAGGCTTAACAATCA+AGG | - | chr2.1:3834712-3834731 | MS.gene069868:CDS | 40.0% | |
| ACCTATGGCTATGTATGGAT+TGG | - | chr2.1:3833464-3833483 | MS.gene069868:intron | 40.0% | |
| ACCTGCAGGAAATCTTAATG+AGG | - | chr2.1:3832026-3832045 | MS.gene069868:intron | 40.0% | |
| ACTTAGTCTCAGGAGACATT+TGG | + | chr2.1:3831729-3831748 | None:intergenic | 40.0% | |
| ATCCTTAGCATCCAAGATCA+TGG | - | chr2.1:3834870-3834889 | MS.gene069868:CDS | 40.0% | |
| CACAATCACATATGTTGGCA+GGG | - | chr2.1:3832414-3832433 | MS.gene069868:intron | 40.0% | |
| GGACACACAGATAACTTTGT+GGG | - | chr2.1:3833214-3833233 | MS.gene069868:intron | 40.0% | |
| GTAGTGCATAGCCTAATATC+AGG | + | chr2.1:3834563-3834582 | None:intergenic | 40.0% | |
| TAAAACGTCCACATGGCTAA+CGG | - | chr2.1:3833192-3833211 | MS.gene069868:intron | 40.0% | |
| TAATCCAGTATGCCTGATTC+TGG | + | chr2.1:3831706-3831725 | None:intergenic | 40.0% | |
| TCCTCATTAAGATTTCCTGC+AGG | + | chr2.1:3832030-3832049 | None:intergenic | 40.0% | |
| TCTCTATGGCGTGAAAACTT+TGG | - | chr2.1:3831622-3831641 | MS.gene069868:CDS | 40.0% | |
| TCTTCCAAGGTGAAAAAAGG+AGG | + | chr2.1:3831667-3831686 | None:intergenic | 40.0% | |
| TGAACAAGAGGAGAAAGGAA+GGG | - | chr2.1:3831909-3831928 | MS.gene069868:intron | 40.0% | |
| TGTCAAAATAGCTGGATGGA+TGG | + | chr2.1:3834429-3834448 | None:intergenic | 40.0% | |
| TGTTGTGCTACAGGAAACAT+GGG | + | chr2.1:3832298-3832317 | None:intergenic | 40.0% | |
| ! | AAGGCTCGCTTAGTTTGAAT+TGG | - | chr2.1:3831860-3831879 | MS.gene069868:intron | 40.0% |
| ! | ACTTTTTGCAGCTACGTTTG+AGG | - | chr2.1:3833927-3833946 | MS.gene069868:intron | 40.0% |
| ! | CTGGATGCACATTTTGTATC+AGG | - | chr2.1:3834320-3834339 | MS.gene069868:intron | 40.0% |
| ! | GCTTTTGATGTGCTTACTTC+TGG | + | chr2.1:3834772-3834791 | None:intergenic | 40.0% |
| ! | GGATGCTAAGGATTTTGTTG+GGG | + | chr2.1:3834863-3834882 | None:intergenic | 40.0% |
| ! | GTATATAGGTTGGGTGGTAA+TGG | - | chr2.1:3832693-3832712 | MS.gene069868:intron | 40.0% |
| ! | TCACCACTTCTCTAAAAAGG+AGG | + | chr2.1:3834001-3834020 | None:intergenic | 40.0% |
| ! | TCAGACTTTTCTCCAGAATC+AGG | - | chr2.1:3831691-3831710 | MS.gene069868:CDS | 40.0% |
| ! | TTTTCCTACTGCACTAAACC+AGG | + | chr2.1:3833012-3833031 | None:intergenic | 40.0% |
| !! | GACAAAACAAGAAGTACTCG+GGG | - | chr2.1:3832894-3832913 | MS.gene069868:intron | 40.0% |
| !! | GTACCTCCTTTTTAGAGAAG+TGG | - | chr2.1:3833995-3834014 | MS.gene069868:intron | 40.0% |
| !! | TTGGATTGGCACACAAGATA+CGG | + | chr2.1:3834404-3834423 | None:intergenic | 40.0% |
| AAAACGTCCACATGGCTAAC+GGG | - | chr2.1:3833193-3833212 | MS.gene069868:intron | 45.0% | |
| AACTGCAGTGAAGACTGTAG+CGG | - | chr2.1:3833520-3833539 | MS.gene069868:intron | 45.0% | |
| AAGGAATTTCGCTGGACTTC+AGG | + | chr2.1:3832006-3832025 | None:intergenic | 45.0% | |
| AATAGCTGGATGGATGGTCT+TGG | + | chr2.1:3834423-3834442 | None:intergenic | 45.0% | |
| AGAATGGCAATGCAACTGCA+AGG | - | chr2.1:3834815-3834834 | MS.gene069868:CDS | 45.0% | |
| AGACCACAACGTGGATAGTA+TGG | - | chr2.1:3832758-3832777 | MS.gene069868:intron | 45.0% | |
| CACTTCAGAGTAACAAGGCA+TGG | + | chr2.1:3834513-3834532 | None:intergenic | 45.0% | |
| CGGCCATATTATCTGCAGAA+TGG | - | chr2.1:3834799-3834818 | MS.gene069868:CDS | 45.0% | |
| GAACAAGAGGAGAAAGGAAG+GGG | - | chr2.1:3831910-3831929 | MS.gene069868:intron | 45.0% | |
| GCACATCAAAAGCTCCTTCT+CGG | - | chr2.1:3834779-3834798 | MS.gene069868:CDS | 45.0% | |
| GCATCCAGTTAGCATCTCTA+GGG | + | chr2.1:3834308-3834327 | None:intergenic | 45.0% | |
| GGAAGAGTAATCAATGCACC+AGG | + | chr2.1:3831961-3831980 | None:intergenic | 45.0% | |
| GGGACACACAGATAACTTTG+TGG | - | chr2.1:3833213-3833232 | MS.gene069868:intron | 45.0% | |
| GGTCCCCTAACGTTTACTTT+AGG | + | chr2.1:3833362-3833381 | None:intergenic | 45.0% | |
| GTCAAAGCTTGACGTTGCAT+GGG | + | chr2.1:3834694-3834713 | None:intergenic | 45.0% | |
| GTCCATGATCTTGGATGCTA+AGG | + | chr2.1:3834875-3834894 | None:intergenic | 45.0% | |
| GTGAACAAGAGGAGAAAGGA+AGG | - | chr2.1:3831908-3831927 | MS.gene069868:intron | 45.0% | |
| GTGTTGTGCTACAGGAAACA+TGG | + | chr2.1:3832299-3832318 | None:intergenic | 45.0% | |
| TCCAAGGTGAAAAAAGGAGG+CGG | + | chr2.1:3831664-3831683 | None:intergenic | 45.0% | |
| TGCAGATAATATGGCCGAGA+AGG | + | chr2.1:3834796-3834815 | None:intergenic | 45.0% | |
| TGCATAGCCTAATATCAGGG+TGG | + | chr2.1:3834559-3834578 | None:intergenic | 45.0% | |
| TGCATCCAGTTAGCATCTCT+AGG | + | chr2.1:3834309-3834328 | None:intergenic | 45.0% | |
| TTCTCCAGAATCAGGCATAC+TGG | - | chr2.1:3831699-3831718 | MS.gene069868:CDS | 45.0% | |
| TTGCTGCAGGAATTCCCATA+TGG | - | chr2.1:3832796-3832815 | MS.gene069868:intron | 45.0% | |
| ! | AAAGAGTGGTGGTGAACAAG+AGG | - | chr2.1:3831897-3831916 | MS.gene069868:intron | 45.0% |
| ! | AACGTCAAGCTTTGACCGAA+AGG | - | chr2.1:3834698-3834717 | MS.gene069868:CDS | 45.0% |
| ! | CAAGAGCATAATGAGGGACA+GGG | - | chr2.1:3832863-3832882 | MS.gene069868:intron | 45.0% |
| ! | CATGCCTTGTTACTCTGAAG+TGG | - | chr2.1:3834511-3834530 | MS.gene069868:CDS | 45.0% |
| ! | GAATTTTCGACTCCAGCGAA+AGG | - | chr2.1:3831784-3831803 | MS.gene069868:intron | 45.0% |
| ! | GCTCGCTTAGTTTGAATTGG+TGG | - | chr2.1:3831863-3831882 | MS.gene069868:intron | 45.0% |
| ! | GGATTTTGTTGGGGAAGCAA+TGG | + | chr2.1:3834854-3834873 | None:intergenic | 45.0% |
| ! | TATGCTCTGGGTTGAATTCC+TGG | - | chr2.1:3832991-3833010 | MS.gene069868:intron | 45.0% |
| ! | TCAAACTAAGCGAGCCTTGT+TGG | + | chr2.1:3831858-3831877 | None:intergenic | 45.0% |
| ! | TCAAGAGCATAATGAGGGAC+AGG | - | chr2.1:3832862-3832881 | MS.gene069868:intron | 45.0% |
| ! | TTGGACTGGAAAACTTTCCC+CGG | + | chr2.1:3831582-3831601 | None:intergenic | 45.0% |
| !! | ACCATTTTAGCGGACATTCG+TGG | + | chr2.1:3833578-3833597 | None:intergenic | 45.0% |
| !! | AGCATAAGATGTGCTGGCTT+CGG | + | chr2.1:3831815-3831834 | None:intergenic | 45.0% |
| !! | CAGGAGCATCTTCTTCTCTA+TGG | - | chr2.1:3831608-3831627 | MS.gene069868:CDS | 45.0% |
| AAGGTGAAAAAAGGAGGCGG+AGG | + | chr2.1:3831661-3831680 | None:intergenic | 50.0% | |
| AATGCAACTGCAAGGCAGAC+TGG | - | chr2.1:3834823-3834842 | MS.gene069868:CDS | 50.0% | |
| AGTGACTGTCTACCAGACCT+AGG | + | chr2.1:3831523-3831542 | None:intergenic | 50.0% | |
| CAGCGAAATTCCTTACCTGC+AGG | - | chr2.1:3832012-3832031 | MS.gene069868:intron | 50.0% | |
| CCACAACGTGGATAGTATGG+TGG | - | chr2.1:3832761-3832780 | MS.gene069868:intron | 50.0% | |
| CCACCATACTATCCACGTTG+TGG | + | chr2.1:3832764-3832783 | None:intergenic | 50.0% | |
| CTCACTCCTACCTGCCATAT+GGG | + | chr2.1:3832813-3832832 | None:intergenic | 50.0% | |
| CTGCAGGTAAGGAATTTCGC+TGG | + | chr2.1:3832014-3832033 | None:intergenic | 50.0% | |
| GAGAAGAAGATGCTCCTGAC+TGG | + | chr2.1:3831606-3831625 | None:intergenic | 50.0% | |
| GCCACGAATGTCCGCTAAAA+TGG | - | chr2.1:3833574-3833593 | MS.gene069868:intron | 50.0% | |
| GGAATTCCCATATGGCAGGT+AGG | - | chr2.1:3832804-3832823 | MS.gene069868:intron | 50.0% | |
| GGTCAAAGCTTGACGTTGCA+TGG | + | chr2.1:3834695-3834714 | None:intergenic | 50.0% | |
| GGTGGTGAACAAGAGGAGAA+AGG | - | chr2.1:3831904-3831923 | MS.gene069868:intron | 50.0% | |
| GTAGATGTCAGACCACAACG+TGG | - | chr2.1:3832749-3832768 | MS.gene069868:intron | 50.0% | |
| TGAAAAAAGGAGGCGGAGGA+AGG | + | chr2.1:3831657-3831676 | None:intergenic | 50.0% | |
| TGACGTTGCATGGGATCCAA+GGG | + | chr2.1:3834685-3834704 | None:intergenic | 50.0% | |
| TGCAGGAATTCCCATATGGC+AGG | - | chr2.1:3832800-3832819 | MS.gene069868:intron | 50.0% | |
| TGTTCACCACCACTCTTTGC+AGG | + | chr2.1:3831895-3831914 | None:intergenic | 50.0% | |
| TTGACGTTGCATGGGATCCA+AGG | + | chr2.1:3834686-3834705 | None:intergenic | 50.0% | |
| ! | ATAACTTTGTGGGTGCCACG+TGG | - | chr2.1:3833224-3833243 | MS.gene069868:intron | 50.0% |
| ! | CTCTGTCTGAAACAACCACG+TGG | + | chr2.1:3833242-3833261 | None:intergenic | 50.0% |
| ! | CTGGATGGATGGTCTTGGAT+TGG | + | chr2.1:3834418-3834437 | None:intergenic | 50.0% |
| ! | TTTTCCAGTCCAAGCCAGTC+AGG | - | chr2.1:3831589-3831608 | MS.gene069868:CDS | 50.0% |
| !! | TTTTAGCGGACATTCGTGGC+CGG | + | chr2.1:3833574-3833593 | None:intergenic | 50.0% |
| !!! | TCCGCCTCCTTTTTTCACCT+TGG | - | chr2.1:3831660-3831679 | MS.gene069868:CDS | 50.0% |
| ACTGGAAAACTTTCCCCGGC+GGG | + | chr2.1:3831578-3831597 | None:intergenic | 55.0% | |
| CCACAGCGCAAAGAACTCCT+AGG | - | chr2.1:3831503-3831522 | MS.gene069868:CDS | 55.0% | |
| CCATATGGCAGGTAGGAGTG+AGG | - | chr2.1:3832811-3832830 | MS.gene069868:intron | 55.0% | |
| CCTAGGAGTTCTTTGCGCTG+TGG | + | chr2.1:3831506-3831525 | None:intergenic | 55.0% | |
| CCTCACTCCTACCTGCCATA+TGG | + | chr2.1:3832814-3832833 | None:intergenic | 55.0% | |
| CTGGCAGTGGGTAGAGGTAA+GGG | + | chr2.1:3834745-3834764 | None:intergenic | 55.0% | |
| CTGGCCCTAGAGATGCTAAC+TGG | - | chr2.1:3834301-3834320 | MS.gene069868:intron | 55.0% | |
| GACTGGAAAACTTTCCCCGG+CGG | + | chr2.1:3831579-3831598 | None:intergenic | 55.0% | |
| GCATAATGAGGGACAGGGTG+AGG | - | chr2.1:3832868-3832887 | MS.gene069868:intron | 55.0% | |
| GCGCAAAGAACTCCTAGGTC+TGG | - | chr2.1:3831508-3831527 | MS.gene069868:CDS | 55.0% | |
| GGGGTGCAGCAAAACCAACA+AGG | - | chr2.1:3831841-3831860 | MS.gene069868:intron | 55.0% | |
| TCGTCACCTGCAAAGAGTGG+TGG | - | chr2.1:3831886-3831905 | MS.gene069868:intron | 55.0% | |
| TCTTCCTCCACCACCAGAAG+TGG | - | chr2.1:3831975-3831994 | MS.gene069868:intron | 55.0% | |
| TGGTCGTCACCTGCAAAGAG+TGG | - | chr2.1:3831883-3831902 | MS.gene069868:intron | 55.0% | |
| TGTGCTTACTTCTGGGTGCC+TGG | + | chr2.1:3834764-3834783 | None:intergenic | 55.0% | |
| TGTGTGTCCCGTTAGCCATG+TGG | + | chr2.1:3833203-3833222 | None:intergenic | 55.0% | |
| ! | ACTTCAGGCCTTGCCACTTC+TGG | + | chr2.1:3831991-3832010 | None:intergenic | 55.0% |
| ! | GAAGATGCTCCTGACTGGCT+TGG | + | chr2.1:3831601-3831620 | None:intergenic | 55.0% |
| !! | CAGTTAGCATCTCTAGGGCC+AGG | + | chr2.1:3834303-3834322 | None:intergenic | 55.0% |
| !!! | TCGGGGCCTTTTTTGCAGAG+AGG | - | chr2.1:3832911-3832930 | MS.gene069868:intron | 55.0% |
| ACTTCTGGGTGCCTGGCAGT+GGG | + | chr2.1:3834757-3834776 | None:intergenic | 60.0% | |
| AGGAAGGGGTTCTCCAGTCG+AGG | - | chr2.1:3831924-3831943 | MS.gene069868:intron | 60.0% | |
| ATCCCCTGTTAATGCCCGCC+GGG | - | chr2.1:3831561-3831580 | MS.gene069868:CDS | 60.0% | |
| CATCCCCTGTTAATGCCCGC+CGG | - | chr2.1:3831560-3831579 | MS.gene069868:CDS | 60.0% | |
| CCTGGCAGTGGGTAGAGGTA+AGG | + | chr2.1:3834746-3834765 | None:intergenic | 60.0% | |
| CCTTACCTCTACCCACTGCC+AGG | - | chr2.1:3834743-3834762 | MS.gene069868:CDS | 60.0% | |
| CTCCACCACCAGAAGTGGCA+AGG | - | chr2.1:3831980-3831999 | MS.gene069868:intron | 60.0% | |
| GCAACTGCAAGGCAGACTGG+AGG | - | chr2.1:3834826-3834845 | MS.gene069868:CDS | 60.0% | |
| GCTTCGGACTTGCCTTTCGC+TGG | + | chr2.1:3831799-3831818 | None:intergenic | 60.0% | |
| GGAAGGGGTTCTCCAGTCGA+GGG | - | chr2.1:3831925-3831944 | MS.gene069868:intron | 60.0% | |
| TACTTCTGGGTGCCTGGCAG+TGG | + | chr2.1:3834758-3834777 | None:intergenic | 60.0% | |
| TTCCCCGGCGGGCATTAACA+GGG | + | chr2.1:3831567-3831586 | None:intergenic | 60.0% | |
| TTTCCCCGGCGGGCATTAAC+AGG | + | chr2.1:3831568-3831587 | None:intergenic | 60.0% | |
| ! | TCAGGCCTTGCCACTTCTGG+TGG | + | chr2.1:3831988-3832007 | None:intergenic | 60.0% |
| !! | CTTGCCACTTCTGGTGGTGG+AGG | + | chr2.1:3831982-3832001 | None:intergenic | 60.0% |
| !! | TGCTCCTGACTGGCTTGGAC+TGG | + | chr2.1:3831596-3831615 | None:intergenic | 60.0% |
| GGCTGAACCACACCCTCGAC+TGG | + | chr2.1:3831940-3831959 | None:intergenic | 65.0% | |
| GGGTTCTCCAGTCGAGGGTG+TGG | - | chr2.1:3831930-3831949 | MS.gene069868:intron | 65.0% | |
| TCCCCGGCGGGCATTAACAG+GGG | + | chr2.1:3831566-3831585 | None:intergenic | 65.0% | |
| TCCCCTGTTAATGCCCGCCG+GGG | - | chr2.1:3831562-3831581 | MS.gene069868:CDS | 65.0% | |
| ! | GGCCTTGCCACTTCTGGTGG+TGG | + | chr2.1:3831985-3832004 | None:intergenic | 65.0% |
| ! | GTCGAGGGTGTGGTTCAGCC+TGG | - | chr2.1:3831940-3831959 | MS.gene069868:intron | 65.0% |
| GGGTGCCTGGCAGTGGGTAG+AGG | + | chr2.1:3834751-3834770 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2.1 | gene | 3831496 | 3834912 | 3831496 | ID=MS.gene069868 |
| chr2.1 | mRNA | 3831496 | 3834912 | 3831496 | ID=MS.gene069868.t1;Parent=MS.gene069868 |
| chr2.1 | exon | 3834338 | 3834912 | 3834338 | ID=MS.gene069868.t1.exon1;Parent=MS.gene069868.t1 |
| chr2.1 | CDS | 3834338 | 3834912 | 3834338 | ID=cds.MS.gene069868.t1;Parent=MS.gene069868.t1 |
| chr2.1 | exon | 3832067 | 3832178 | 3832067 | ID=MS.gene069868.t1.exon2;Parent=MS.gene069868.t1 |
| chr2.1 | CDS | 3832067 | 3832178 | 3832067 | ID=cds.MS.gene069868.t1;Parent=MS.gene069868.t1 |
| chr2.1 | exon | 3831496 | 3831801 | 3831496 | ID=MS.gene069868.t1.exon3;Parent=MS.gene069868.t1 |
| chr2.1 | CDS | 3831496 | 3831801 | 3831496 | ID=cds.MS.gene069868.t1;Parent=MS.gene069868.t1 |
| Gene Sequence |
| Protein sequence |
