Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene34667.t1 | KEH19727.1 | 87.2 | 759 | 75 | 4 | 1 | 745 | 1 | 751 | 0.00E+00 | 1177.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene34667.t1 | A0A072TQP0 | 87.2 | 759 | 75 | 4 | 1 | 745 | 1 | 751 | 0.0e+00 | 1177.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049159 | MS.gene34667 | 0.810413 | 1.17E-50 | -1.69E-46 |
| MS.gene049254 | MS.gene34667 | 0.83682 | 7.48E-57 | -1.69E-46 |
| MS.gene049272 | MS.gene34667 | 0.803701 | 3.07E-49 | -1.69E-46 |
| MS.gene049378 | MS.gene34667 | 0.829203 | 5.87E-55 | -1.69E-46 |
| MS.gene049435 | MS.gene34667 | 0.827108 | 1.88E-54 | -1.69E-46 |
| MS.gene049452 | MS.gene34667 | 0.813728 | 2.21E-51 | -1.69E-46 |
| MS.gene049567 | MS.gene34667 | 0.805393 | 1.36E-49 | -1.69E-46 |
| MS.gene049669 | MS.gene34667 | 0.807973 | 3.89E-50 | -1.69E-46 |
| MS.gene049958 | MS.gene34667 | 0.800436 | 1.44E-48 | -1.69E-46 |
| MS.gene050026 | MS.gene34667 | 0.848046 | 7.87E-60 | -1.69E-46 |
| MS.gene050156 | MS.gene34667 | 0.802542 | 5.34E-49 | -1.69E-46 |
| MS.gene050221 | MS.gene34667 | 0.803313 | 3.70E-49 | -1.69E-46 |
| MS.gene050226 | MS.gene34667 | 0.81213 | 4.95E-51 | -1.69E-46 |
| MS.gene050227 | MS.gene34667 | 0.803307 | 3.71E-49 | -1.69E-46 |
| MS.gene050228 | MS.gene34667 | 0.815858 | 7.45E-52 | -1.69E-46 |
| MS.gene050442 | MS.gene34667 | 0.849854 | 2.47E-60 | -1.69E-46 |
| MS.gene050633 | MS.gene34667 | 0.804358 | 2.24E-49 | -1.69E-46 |
| MS.gene050657 | MS.gene34667 | 0.800781 | 1.23E-48 | -1.69E-46 |
| MS.gene050719 | MS.gene34667 | 0.802581 | 5.24E-49 | -1.69E-46 |
| MS.gene050750 | MS.gene34667 | 0.83819 | 3.33E-57 | -1.69E-46 |
| MS.gene050759 | MS.gene34667 | 0.822539 | 2.24E-53 | -1.69E-46 |
| MS.gene050820 | MS.gene34667 | 0.803107 | 4.08E-49 | -1.69E-46 |
| MS.gene050826 | MS.gene34667 | 0.823647 | 1.24E-53 | -1.69E-46 |
| MS.gene050953 | MS.gene34667 | 0.834624 | 2.69E-56 | -1.69E-46 |
| MS.gene050962 | MS.gene34667 | 0.814117 | 1.81E-51 | -1.69E-46 |
| MS.gene051147 | MS.gene34667 | 0.839926 | 1.18E-57 | -1.69E-46 |
| MS.gene051198 | MS.gene34667 | 0.81232 | 4.50E-51 | -1.69E-46 |
| MS.gene051210 | MS.gene34667 | 0.803196 | 3.91E-49 | -1.69E-46 |
| MS.gene051368 | MS.gene34667 | 0.805635 | 1.21E-49 | -1.69E-46 |
| MS.gene051710 | MS.gene34667 | 0.81114 | 8.13E-51 | -1.69E-46 |
| MS.gene051744 | MS.gene34667 | 0.801274 | 9.73E-49 | -1.69E-46 |
| MS.gene051800 | MS.gene34667 | 0.835444 | 1.67E-56 | -1.69E-46 |
| MS.gene052037 | MS.gene34667 | 0.807525 | 4.84E-50 | -1.69E-46 |
| MS.gene052190 | MS.gene34667 | 0.803947 | 2.73E-49 | -1.69E-46 |
| MS.gene052208 | MS.gene34667 | 0.815276 | 1.00E-51 | -1.69E-46 |
| MS.gene052333 | MS.gene34667 | 0.866159 | 3.50E-65 | -1.69E-46 |
| MS.gene052464 | MS.gene34667 | 0.816274 | 6.02E-52 | -1.69E-46 |
| MS.gene052513 | MS.gene34667 | 0.814956 | 1.18E-51 | -1.69E-46 |
| MS.gene052582 | MS.gene34667 | 0.81092 | 9.07E-51 | -1.69E-46 |
| MS.gene052584 | MS.gene34667 | 0.801453 | 8.94E-49 | -1.69E-46 |
| MS.gene052586 | MS.gene34667 | 0.815858 | 7.45E-52 | -1.69E-46 |
| MS.gene052674 | MS.gene34667 | 0.850578 | 1.55E-60 | -1.69E-46 |
| MS.gene052675 | MS.gene34667 | 0.850504 | 1.63E-60 | -1.69E-46 |
| MS.gene052677 | MS.gene34667 | 0.855522 | 5.96E-62 | -1.69E-46 |
| MS.gene053147 | MS.gene34667 | 0.810935 | 9.00E-51 | -1.69E-46 |
| MS.gene053166 | MS.gene34667 | 0.844389 | 7.79E-59 | -1.69E-46 |
| MS.gene053201 | MS.gene34667 | 0.824795 | 6.65E-54 | -1.69E-46 |
| MS.gene053512 | MS.gene34667 | 0.800623 | 1.32E-48 | -1.69E-46 |
| MS.gene053646 | MS.gene34667 | 0.808007 | 3.83E-50 | -1.69E-46 |
| MS.gene053647 | MS.gene34667 | 0.836816 | 7.50E-57 | -1.69E-46 |
| MS.gene053966 | MS.gene34667 | 0.808173 | 3.53E-50 | -1.69E-46 |
| MS.gene054093 | MS.gene34667 | 0.826038 | 3.38E-54 | -1.69E-46 |
| MS.gene05414 | MS.gene34667 | 0.868078 | 8.53E-66 | -1.69E-46 |
| MS.gene05415 | MS.gene34667 | 0.861934 | 7.24E-64 | -1.69E-46 |
| MS.gene05417 | MS.gene34667 | 0.845095 | 5.03E-59 | -1.69E-46 |
| MS.gene054236 | MS.gene34667 | 0.854971 | 8.63E-62 | -1.69E-46 |
| MS.gene05423 | MS.gene34667 | 0.806099 | 9.69E-50 | -1.69E-46 |
| MS.gene054291 | MS.gene34667 | -0.839547 | 1.48E-57 | -1.69E-46 |
| MS.gene054405 | MS.gene34667 | 0.829037 | 6.44E-55 | -1.69E-46 |
| MS.gene054467 | MS.gene34667 | 0.854174 | 1.47E-61 | -1.69E-46 |
| MS.gene054468 | MS.gene34667 | 0.860387 | 2.14E-63 | -1.69E-46 |
| MS.gene054472 | MS.gene34667 | 0.814464 | 1.52E-51 | -1.69E-46 |
| MS.gene054479 | MS.gene34667 | 0.807748 | 4.34E-50 | -1.69E-46 |
| MS.gene054559 | MS.gene34667 | 0.828527 | 8.55E-55 | -1.69E-46 |
| MS.gene054651 | MS.gene34667 | 0.804357 | 2.25E-49 | -1.69E-46 |
| MS.gene054826 | MS.gene34667 | 0.803448 | 3.47E-49 | -1.69E-46 |
| MS.gene055227 | MS.gene34667 | 0.834415 | 3.04E-56 | -1.69E-46 |
| MS.gene055228 | MS.gene34667 | 0.821617 | 3.67E-53 | -1.69E-46 |
| MS.gene055356 | MS.gene34667 | 0.802726 | 4.89E-49 | -1.69E-46 |
| MS.gene055367 | MS.gene34667 | 0.803801 | 2.93E-49 | -1.69E-46 |
| MS.gene055701 | MS.gene34667 | 0.843555 | 1.30E-58 | -1.69E-46 |
| MS.gene055818 | MS.gene34667 | 0.835637 | 1.49E-56 | -1.69E-46 |
| MS.gene055875 | MS.gene34667 | 0.829762 | 4.29E-55 | -1.69E-46 |
| MS.gene055926 | MS.gene34667 | 0.847216 | 1.33E-59 | -1.69E-46 |
| MS.gene05595 | MS.gene34667 | 0.833815 | 4.29E-56 | -1.69E-46 |
| MS.gene05604 | MS.gene34667 | 0.813061 | 3.10E-51 | -1.69E-46 |
| MS.gene056142 | MS.gene34667 | 0.809391 | 1.94E-50 | -1.69E-46 |
| MS.gene056173 | MS.gene34667 | 0.819916 | 9.03E-53 | -1.69E-46 |
| MS.gene056174 | MS.gene34667 | 0.837555 | 4.85E-57 | -1.69E-46 |
| MS.gene056252 | MS.gene34667 | 0.804414 | 2.18E-49 | -1.69E-46 |
| MS.gene056373 | MS.gene34667 | 0.802044 | 6.76E-49 | -1.69E-46 |
| MS.gene056506 | MS.gene34667 | 0.857169 | 1.96E-62 | -1.69E-46 |
| MS.gene056779 | MS.gene34667 | 0.811251 | 7.69E-51 | -1.69E-46 |
| MS.gene056873 | MS.gene34667 | 0.820845 | 5.53E-53 | -1.69E-46 |
| MS.gene057012 | MS.gene34667 | 0.818674 | 1.73E-52 | -1.69E-46 |
| MS.gene057026 | MS.gene34667 | 0.836052 | 1.17E-56 | -1.69E-46 |
| MS.gene057156 | MS.gene34667 | -0.809548 | 1.79E-50 | -1.69E-46 |
| MS.gene057194 | MS.gene34667 | 0.836757 | 7.76E-57 | -1.69E-46 |
| MS.gene057444 | MS.gene34667 | 0.811824 | 5.77E-51 | -1.69E-46 |
| MS.gene05761 | MS.gene34667 | 0.833123 | 6.39E-56 | -1.69E-46 |
| MS.gene057755 | MS.gene34667 | 0.802173 | 6.36E-49 | -1.69E-46 |
| MS.gene057869 | MS.gene34667 | 0.8124 | 4.32E-51 | -1.69E-46 |
| MS.gene057915 | MS.gene34667 | 0.808815 | 2.57E-50 | -1.69E-46 |
| MS.gene058010 | MS.gene34667 | 0.827305 | 1.68E-54 | -1.69E-46 |
| MS.gene058037 | MS.gene34667 | 0.821904 | 3.15E-53 | -1.69E-46 |
| MS.gene058146 | MS.gene34667 | 0.819046 | 1.43E-52 | -1.69E-46 |
| MS.gene058294 | MS.gene34667 | 0.813346 | 2.68E-51 | -1.69E-46 |
| MS.gene058515 | MS.gene34667 | 0.82593 | 3.58E-54 | -1.69E-46 |
| MS.gene058935 | MS.gene34667 | 0.8005 | 1.40E-48 | -1.69E-46 |
| MS.gene058979 | MS.gene34667 | 0.86906 | 4.11E-66 | -1.69E-46 |
| MS.gene059161 | MS.gene34667 | 0.808723 | 2.69E-50 | -1.69E-46 |
| MS.gene059272 | MS.gene34667 | 0.824795 | 6.65E-54 | -1.69E-46 |
| MS.gene059283 | MS.gene34667 | 0.812975 | 3.23E-51 | -1.69E-46 |
| MS.gene059382 | MS.gene34667 | 0.800859 | 1.18E-48 | -1.69E-46 |
| MS.gene059439 | MS.gene34667 | 0.808703 | 2.72E-50 | -1.69E-46 |
| MS.gene059550 | MS.gene34667 | 0.831114 | 2.01E-55 | -1.69E-46 |
| MS.gene059584 | MS.gene34667 | 0.812767 | 3.59E-51 | -1.69E-46 |
| MS.gene05973 | MS.gene34667 | 0.810205 | 1.29E-50 | -1.69E-46 |
| MS.gene060011 | MS.gene34667 | 0.885806 | 5.92E-72 | -1.69E-46 |
| MS.gene060167 | MS.gene34667 | 0.869913 | 2.17E-66 | -1.69E-46 |
| MS.gene060271 | MS.gene34667 | 0.833814 | 4.30E-56 | -1.69E-46 |
| MS.gene060322 | MS.gene34667 | 0.85276 | 3.74E-61 | -1.69E-46 |
| MS.gene060373 | MS.gene34667 | 0.841216 | 5.44E-58 | -1.69E-46 |
| MS.gene06052 | MS.gene34667 | 0.863304 | 2.74E-64 | -1.69E-46 |
| MS.gene060683 | MS.gene34667 | 0.822768 | 1.99E-53 | -1.69E-46 |
| MS.gene060685 | MS.gene34667 | 0.821152 | 4.70E-53 | -1.69E-46 |
| MS.gene060802 | MS.gene34667 | 0.812203 | 4.77E-51 | -1.69E-46 |
| MS.gene060998 | MS.gene34667 | 0.842465 | 2.54E-58 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene34667.t1 | MTR_8g467380 | 88.274 | 759 | 67 | 4 | 1 | 745 | 1 | 751 | 0.0 | 1127 |
| MS.gene34667.t1 | MTR_8g467380 | 60.969 | 351 | 92 | 7 | 854 | 1162 | 452 | 799 | 4.92e-105 | 350 |
| MS.gene34667.t1 | MTR_8g467390 | 78.431 | 306 | 31 | 1 | 842 | 1112 | 58 | 363 | 1.36e-147 | 447 |
| MS.gene34667.t1 | MTR_8g467390 | 60.000 | 355 | 120 | 6 | 393 | 739 | 23 | 363 | 6.97e-121 | 377 |
| MS.gene34667.t1 | MTR_5g040600 | 38.417 | 859 | 337 | 27 | 33 | 741 | 5 | 821 | 2.20e-125 | 408 |
| MS.gene34667.t1 | MTR_5g040600 | 43.799 | 379 | 155 | 8 | 834 | 1167 | 511 | 876 | 1.22e-72 | 261 |
| MS.gene34667.t1 | MTR_7g010160 | 40.407 | 344 | 188 | 7 | 408 | 745 | 330 | 662 | 2.67e-62 | 228 |
| MS.gene34667.t1 | MTR_7g010160 | 34.454 | 357 | 183 | 9 | 854 | 1168 | 367 | 714 | 5.90e-44 | 172 |
| MS.gene34667.t1 | MTR_4g005350 | 28.808 | 302 | 179 | 10 | 427 | 716 | 48 | 325 | 8.47e-18 | 87.8 |
| MS.gene34667.t1 | MTR_4g005350 | 30.909 | 220 | 126 | 10 | 955 | 1167 | 194 | 394 | 4.99e-16 | 82.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene34667.t1 | AT1G69610 | 47.020 | 302 | 140 | 8 | 441 | 740 | 218 | 501 | 5.25e-69 | 243 |
| MS.gene34667.t1 | AT1G69610 | 38.527 | 353 | 160 | 11 | 850 | 1161 | 218 | 554 | 9.09e-48 | 181 |
| MS.gene34667.t1 | AT1G69610 | 47.020 | 302 | 140 | 8 | 441 | 740 | 262 | 545 | 1.76e-68 | 243 |
| MS.gene34667.t1 | AT1G69610 | 38.527 | 353 | 160 | 11 | 850 | 1161 | 262 | 598 | 3.74e-47 | 180 |
| MS.gene34667.t1 | AT1G69610 | 47.020 | 302 | 140 | 8 | 441 | 740 | 263 | 546 | 2.19e-68 | 243 |
| MS.gene34667.t1 | AT1G69610 | 38.527 | 353 | 160 | 11 | 850 | 1161 | 263 | 599 | 4.15e-47 | 180 |
| MS.gene34667.t1 | AT5G39785 | 46.953 | 279 | 135 | 8 | 440 | 709 | 207 | 481 | 7.75e-62 | 223 |
| MS.gene34667.t1 | AT5G39785 | 35.912 | 362 | 174 | 11 | 854 | 1161 | 212 | 569 | 2.02e-47 | 180 |
| MS.gene34667.t1 | AT5G39785 | 46.953 | 279 | 135 | 8 | 440 | 709 | 207 | 481 | 8.12e-62 | 223 |
| MS.gene34667.t1 | AT5G39785 | 36.464 | 362 | 171 | 12 | 854 | 1161 | 212 | 568 | 5.39e-48 | 182 |
| MS.gene34667.t1 | AT5G39785 | 46.953 | 279 | 135 | 8 | 440 | 709 | 207 | 481 | 8.12e-62 | 223 |
| MS.gene34667.t1 | AT5G39785 | 36.464 | 362 | 171 | 12 | 854 | 1161 | 212 | 568 | 5.39e-48 | 182 |
| MS.gene34667.t1 | AT5G39785 | 46.953 | 279 | 135 | 8 | 440 | 709 | 207 | 481 | 8.12e-62 | 223 |
| MS.gene34667.t1 | AT5G39785 | 36.464 | 362 | 171 | 12 | 854 | 1161 | 212 | 568 | 5.39e-48 | 182 |
| MS.gene34667.t1 | AT5G39785 | 46.953 | 279 | 135 | 8 | 440 | 709 | 207 | 481 | 1.77e-61 | 223 |
| MS.gene34667.t1 | AT5G39785 | 33.938 | 386 | 173 | 13 | 854 | 1161 | 212 | 593 | 2.79e-43 | 168 |
| MS.gene34667.t1 | AT3G20260 | 34.615 | 156 | 99 | 1 | 575 | 730 | 192 | 344 | 1.65e-18 | 90.1 |
| MS.gene34667.t1 | AT3G20260 | 26.786 | 224 | 139 | 6 | 949 | 1162 | 192 | 400 | 3.63e-14 | 76.6 |
| MS.gene34667.t1 | AT3G01175 | 28.144 | 334 | 184 | 13 | 401 | 708 | 143 | 446 | 3.77e-14 | 77.4 |
| MS.gene34667.t1 | AT3G01175 | 34.483 | 145 | 83 | 4 | 909 | 1042 | 257 | 400 | 1.05e-11 | 69.7 |
| MS.gene34667.t1 | AT1G73850 | 29.012 | 162 | 102 | 4 | 581 | 732 | 385 | 543 | 1.36e-13 | 75.9 |
| MS.gene34667.t1 | AT1G73850 | 29.012 | 162 | 102 | 4 | 581 | 732 | 385 | 543 | 1.36e-13 | 75.9 |
Find 170 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGTGATGATGAAATACTTTA+TGG | 0.111923 | 8.1:+46304458 | None:intergenic |
| AGGAGGACTTGCAACAATTT+TGG | 0.237380 | 8.1:-46306723 | MS.gene34667:CDS |
| CGAGTATCATGACCAGTTTC+TGG | 0.246490 | 8.1:-46294934 | MS.gene34667:CDS |
| ACACAAAGATATTGGTGTTT+TGG | 0.247835 | 8.1:-46307221 | MS.gene34667:CDS |
| TATCATAAGAAACATTTCTT+AGG | 0.248228 | 8.1:+46307167 | None:intergenic |
| TCTTTGACATGTAAGATTAT+AGG | 0.254165 | 8.1:-46307004 | MS.gene34667:CDS |
| TGATCCTCACATACATATTC+AGG | 0.265707 | 8.1:-46308033 | MS.gene34667:intron |
| TAGAAAGTGCATCATTTCTT+AGG | 0.278161 | 8.1:+46307416 | None:intergenic |
| TAATGAATTGCATAGGGATT+TGG | 0.281823 | 8.1:-46305258 | MS.gene34667:CDS |
| CTTCAAGTTCCAATCATAAA+AGG | 0.287284 | 8.1:-46305002 | MS.gene34667:intron |
| TGAAAATATAAAGTGTTCTT+TGG | 0.289795 | 8.1:-46307389 | MS.gene34667:CDS |
| CTTTGTGATGAGATACTCTA+TGG | 0.296421 | 8.1:+46295714 | None:intergenic |
| TTGTCTATGAAAACTTGATT+TGG | 0.297848 | 8.1:-46308111 | MS.gene34667:CDS |
| AGGAATCCATGCAAGTGTTT+TGG | 0.298411 | 8.1:-46304519 | MS.gene34667:CDS |
| CGTAGGTATAATTTAGTTGC+TGG | 0.316010 | 8.1:-46305137 | MS.gene34667:CDS |
| TGAGGAAGTTCAAGATTTAA+AGG | 0.318925 | 8.1:-46306942 | MS.gene34667:CDS |
| GGTAATGGAACAAATCAAAT+TGG | 0.320087 | 8.1:-46306765 | MS.gene34667:CDS |
| TTGGACAAATTTGTCTCTCT+TGG | 0.326996 | 8.1:-46296398 | MS.gene34667:CDS |
| TGATGAATTGAATAAGGATT+TGG | 0.331420 | 8.1:-46296433 | MS.gene34667:CDS |
| ATCCTATGACCTTGTTGAAT+TGG | 0.333483 | 8.1:+46296240 | None:intergenic |
| AGAAGAAACCGAAGAAGATT+TGG | 0.341043 | 8.1:-46297241 | MS.gene34667:CDS |
| CCTTATGCAACGGTTCTTAG+AGG | 0.344392 | 8.1:-46305093 | MS.gene34667:CDS |
| TTAGTTCAACACAAAGATAT+TGG | 0.346942 | 8.1:-46307229 | MS.gene34667:CDS |
| GCGTGTTGATGAATTGAATA+AGG | 0.355984 | 8.1:-46296439 | MS.gene34667:CDS |
| ATCAAATTCCAAATCTTCTT+CGG | 0.359656 | 8.1:+46297233 | None:intergenic |
| TGTCTATGAAAACTTGATTT+GGG | 0.361387 | 8.1:-46308110 | MS.gene34667:CDS |
| CTCCAAGTTCCAACTCTAAT+AGG | 0.362764 | 8.1:-46296177 | MS.gene34667:intron |
| GAAGACATCTCAGAACTTCT+AGG | 0.364475 | 8.1:-46295674 | MS.gene34667:CDS |
| CTCACCTCAGTCCAGGGTTC+CGG | 0.365007 | 8.1:-46299886 | MS.gene34667:intron |
| TCACTAGAGGCTTGACTTGT+TGG | 0.371416 | 8.1:+46305345 | None:intergenic |
| GCTCATGAGACGGCGGCATT+TGG | 0.377728 | 8.1:+46299863 | None:intergenic |
| CTTATGTTGTGCGAATTATT+CGG | 0.379843 | 8.1:+46294033 | None:intergenic |
| TTTCAAGCCATGCATGCAAT+AGG | 0.382640 | 8.1:-46306536 | MS.gene34667:intron |
| CATTAACAAGCTTCAACATT+GGG | 0.384723 | 8.1:+46305276 | None:intergenic |
| ATCCTATGGTCTTGTTGAAA+TGG | 0.393919 | 8.1:+46305065 | None:intergenic |
| ACCTTCTTAATTTCAACAAT+GGG | 0.396067 | 8.1:+46297048 | None:intergenic |
| CTTCTTACCTATTGCATACA+AGG | 0.396396 | 8.1:+46296972 | None:intergenic |
| TGGACAAATTTGTCTCTCTT+GGG | 0.396784 | 8.1:-46296397 | MS.gene34667:CDS |
| CAGAAATTTCAGAACTTCTA+CGG | 0.400406 | 8.1:-46304414 | MS.gene34667:CDS |
| AGAAACAGAGTACTCTGTTC+TGG | 0.400740 | 8.1:-46307764 | MS.gene34667:CDS |
| AACTATGTGGTTCATTCCAT+GGG | 0.400834 | 8.1:-46308058 | MS.gene34667:CDS |
| TGAAAACTTGATTTGGGCAT+TGG | 0.401931 | 8.1:-46308104 | MS.gene34667:CDS |
| ATCCCACTTGAGCCAGAAAC+TGG | 0.403557 | 8.1:+46294922 | None:intergenic |
| TGAAGAAGAGTTGGATGAAA+TGG | 0.405660 | 8.1:-46306840 | MS.gene34667:CDS |
| CATCAACACGCTTCAACATT+GGG | 0.409760 | 8.1:+46296451 | None:intergenic |
| TATTCAAATCCAATTACATA+AGG | 0.410082 | 8.1:-46304389 | MS.gene34667:intron |
| TCCACCATCAAGATGAAAAT+CGG | 0.412118 | 8.1:+46307321 | None:intergenic |
| CGAATAATTCGCACAACATA+AGG | 0.413867 | 8.1:-46294032 | None:intergenic |
| CACCTATTAGAGTTGGAACT+TGG | 0.416565 | 8.1:+46296175 | None:intergenic |
| TAAGTGAGAATTGGATAGTA+AGG | 0.418217 | 8.1:-46294974 | MS.gene34667:CDS |
| TTGGCCAAATCTGTCTCTCT+TGG | 0.422315 | 8.1:-46305223 | MS.gene34667:CDS |
| TCATCAACACGCTTCAACAT+TGG | 0.425987 | 8.1:+46296450 | None:intergenic |
| ATCTTCTCTTCAATACTCAA+TGG | 0.427669 | 8.1:+46306641 | None:intergenic |
| AACGGATCAAATTGAATTTG+AGG | 0.429787 | 8.1:-46297200 | MS.gene34667:CDS |
| TAGTGATCCCTCAGAATTTG+TGG | 0.431182 | 8.1:-46305328 | MS.gene34667:CDS |
| AAGAAGAAGAAGAAACAAAA+GGG | 0.437140 | 8.1:-46307279 | MS.gene34667:CDS |
| CAACTATGTGGTTCATTCCA+TGG | 0.437930 | 8.1:-46308059 | MS.gene34667:CDS |
| AAGGTTAGAACAGATAATTA+AGG | 0.438372 | 8.1:-46295792 | MS.gene34667:CDS |
| ATATGAAAATCTTCATAGCT+TGG | 0.439737 | 8.1:+46307808 | None:intergenic |
| TCCCATTGTTGAAATTAAGA+AGG | 0.439740 | 8.1:-46297049 | MS.gene34667:CDS |
| GCTCTCACCTATTGCATGCA+TGG | 0.440275 | 8.1:+46306529 | None:intergenic |
| AACGAAAAGCTTAAGATCAT+AGG | 0.441241 | 8.1:+46307439 | None:intergenic |
| CTTTGAAGAGTAAAATTAGC+TGG | 0.441263 | 8.1:+46297411 | None:intergenic |
| TTTCCCAAGAGAGACAGATT+TGG | 0.441839 | 8.1:+46305219 | None:intergenic |
| ACAAGTGGATAAGTGAGAAT+TGG | 0.442582 | 8.1:-46294983 | MS.gene34667:CDS |
| TGGGGTGAAGAGGATGGAAT+TGG | 0.445515 | 8.1:-46304568 | MS.gene34667:CDS |
| GTTGGATGAAATGGATTATG+AGG | 0.446923 | 8.1:-46306831 | MS.gene34667:CDS |
| TTCAAAATTATGTCAAGAAT+CGG | 0.447066 | 8.1:-46305043 | MS.gene34667:CDS |
| TTCTGGCTCAAGTGGGATTG+AGG | 0.448487 | 8.1:-46294917 | MS.gene34667:CDS |
| TAACCTTATGCAATTGCGTT+CGG | 0.452085 | 8.1:+46295645 | None:intergenic |
| TCACATTGTTGAAATTCAAA+AGG | 0.455037 | 8.1:-46306606 | MS.gene34667:CDS |
| AAACGTAAAGAAGAAGCAAA+AGG | 0.457390 | 8.1:-46307700 | MS.gene34667:CDS |
| AACCTTCTTAATTTCAACAA+TGG | 0.460048 | 8.1:+46297047 | None:intergenic |
| TCATTAACAAGCTTCAACAT+TGG | 0.467308 | 8.1:+46305275 | None:intergenic |
| TATCAAGCCTTGTATGCAAT+AGG | 0.468349 | 8.1:-46296979 | MS.gene34667:intron |
| AGCCAATTCAACAAGGTCAT+AGG | 0.468650 | 8.1:-46296242 | MS.gene34667:CDS |
| AACAATGTATGAAGAAGAGT+TGG | 0.470871 | 8.1:-46306849 | MS.gene34667:CDS |
| AAGGTTAGAACAAATAATTA+AGG | 0.476290 | 8.1:-46304539 | MS.gene34667:CDS |
| GCGGCATTTGGCCGGAACCC+TGG | 0.480497 | 8.1:+46299875 | None:intergenic |
| AGCAGGTCTTCTTCAACTAA+AGG | 0.481722 | 8.1:-46305405 | MS.gene34667:intron |
| TCTCATGAGCATTCCTTCCA+TGG | 0.482442 | 8.1:-46299850 | MS.gene34667:CDS |
| ATTGAGTATTGAAGAGAAGA+TGG | 0.483088 | 8.1:-46306639 | MS.gene34667:CDS |
| ATGAGACGGCGGCATTTGGC+CGG | 0.484605 | 8.1:+46299867 | None:intergenic |
| GATTTGGAACTTGTTTATGT+TGG | 0.486146 | 8.1:-46296417 | MS.gene34667:CDS |
| CCTCTAAGAACCGTTGCATA+AGG | 0.486317 | 8.1:+46305093 | None:intergenic |
| TTTGGTGCACCTATTAGAGT+TGG | 0.489154 | 8.1:+46296168 | None:intergenic |
| TATAGAGAGTGAAGAAAGAG+AGG | 0.492005 | 8.1:-46307788 | MS.gene34667:CDS |
| TGGCCAAATCTGTCTCTCTT+GGG | 0.494897 | 8.1:-46305222 | MS.gene34667:CDS |
| AATCAACAAGTTGATGAGAA+AGG | 0.498472 | 8.1:-46307724 | MS.gene34667:CDS |
| ATTAAGTGGGGTGAAGAGGA+TGG | 0.499812 | 8.1:-46304574 | MS.gene34667:CDS |
| GTGGGAGAATGATGAGGTAA+TGG | 0.503171 | 8.1:-46306780 | MS.gene34667:CDS |
| TATCCGAACGCAATTGCATA+AGG | 0.504701 | 8.1:-46295648 | MS.gene34667:intron |
| TTTGTCAGAGATAACGATGA+TGG | 0.505430 | 8.1:-46295746 | MS.gene34667:CDS |
| CATTGGAAATATAGAGAAGA+AGG | 0.506283 | 8.1:-46307131 | MS.gene34667:CDS |
| CCTCTAGAAACCGTTGGATG+AGG | 0.506324 | 8.1:+46296268 | None:intergenic |
| CTTCAATTGAACAAAACAAA+AGG | 0.507280 | 8.1:-46297476 | MS.gene34667:CDS |
| GATTTGGAAATTGTTTATGT+TGG | 0.507681 | 8.1:-46305242 | MS.gene34667:CDS |
| AATTTGATAAGTTAATAAAA+CGG | 0.509406 | 8.1:-46297218 | MS.gene34667:CDS |
| AAACTTCCAAAACACTTGCA+TGG | 0.511519 | 8.1:+46304513 | None:intergenic |
| GCTTGTTAATGAATTGCATA+GGG | 0.516958 | 8.1:-46305264 | MS.gene34667:CDS |
| GGGATTGAGGTTGATTTCAA+AGG | 0.518055 | 8.1:-46294904 | MS.gene34667:intron |
| AGAAATTTCAGAACTTCTAC+GGG | 0.520295 | 8.1:-46304413 | MS.gene34667:CDS |
| GAGGAGTTTCATGTTTCTCA+AGG | 0.521619 | 8.1:-46307088 | MS.gene34667:CDS |
| GATGCTATCAACAGAAAATG+AGG | 0.525217 | 8.1:-46297020 | MS.gene34667:CDS |
| TCAATTTGAAGATTATGAGA+TGG | 0.525649 | 8.1:-46307866 | MS.gene34667:CDS |
| ATTGATGAAGAGGATGAAGA+TGG | 0.525974 | 8.1:-46297150 | MS.gene34667:CDS |
| CTCTAGAAACCGTTGGATGA+GGG | 0.525976 | 8.1:+46296269 | None:intergenic |
| ACATGTCAAAGAATCATCAT+TGG | 0.527186 | 8.1:+46307015 | None:intergenic |
| TCTCTTGGGAAATGCTATGT+TGG | 0.528205 | 8.1:-46296383 | MS.gene34667:CDS |
| AGGAAAAGAAAGAAATTGTG+TGG | 0.534785 | 8.1:-46295844 | MS.gene34667:CDS |
| TGTTGAGCGCGAATACGAAA+AGG | 0.536522 | 8.1:-46306876 | MS.gene34667:CDS |
| TTTGGGCATTGGCTTCTGCA+TGG | 0.537606 | 8.1:-46308093 | MS.gene34667:CDS |
| AAACTAAAGCTTAAGAACAT+AGG | 0.543009 | 8.1:+46307190 | None:intergenic |
| AGAAATTGTGTGGGGTGACG+AGG | 0.544018 | 8.1:-46295834 | MS.gene34667:CDS |
| TGACCAGTTTCTGGCTCAAG+TGG | 0.544160 | 8.1:-46294925 | MS.gene34667:CDS |
| TAGAGGCTTGACTTGTTGGA+CGG | 0.547728 | 8.1:+46305349 | None:intergenic |
| ATAGAGTATCTCATCACAAA+GGG | 0.552470 | 8.1:-46295712 | MS.gene34667:CDS |
| GCTCTTCCTCTAGAAACCGT+TGG | 0.554277 | 8.1:+46296262 | None:intergenic |
| AGGATGCAATTGCTATTGAA+AGG | 0.555575 | 8.1:-46295811 | MS.gene34667:CDS |
| TCTCTTGGGAAATCCTATGT+TGG | 0.556438 | 8.1:-46305208 | MS.gene34667:CDS |
| ATACTTACATGACGGATCCA+TGG | 0.557678 | 8.1:+46299833 | None:intergenic |
| TGAAACAATATGATTTGCAA+TGG | 0.558583 | 8.1:-46296338 | MS.gene34667:CDS |
| GAAAGCTGATCAAGCACAAG+TGG | 0.559487 | 8.1:-46294998 | MS.gene34667:CDS |
| ACTTGCAACAATTGATGAAG+AGG | 0.560106 | 8.1:-46297160 | MS.gene34667:CDS |
| GGAAAAGAAAGAAATTGTGT+GGG | 0.563898 | 8.1:-46295843 | MS.gene34667:CDS |
| AGCTTGTTAATGAATTGCAT+AGG | 0.564944 | 8.1:-46305265 | MS.gene34667:CDS |
| TTGCGTGGCCACAAATTCTG+AGG | 0.565008 | 8.1:+46305320 | None:intergenic |
| ATGATTTGCAATGGTCTCGT+AGG | 0.565881 | 8.1:-46296329 | MS.gene34667:CDS |
| AACGTAAAGAAGAAGCAAAA+GGG | 0.566227 | 8.1:-46307699 | MS.gene34667:CDS |
| AGGATGGAATTGGTAGTGAA+AGG | 0.568749 | 8.1:-46304558 | MS.gene34667:CDS |
| ACTATTAGAGAATAATTTCG+AGG | 0.570341 | 8.1:-46307107 | MS.gene34667:CDS |
| TCATCATCACAAAGAGAATG+AGG | 0.575913 | 8.1:-46304446 | MS.gene34667:CDS |
| ATATGAGTGTGAAAGTCTTG+AGG | 0.576939 | 8.1:-46306960 | MS.gene34667:CDS |
| GATGGATGAGTTCACTGAAG+AGG | 0.585732 | 8.1:-46307848 | MS.gene34667:CDS |
| ACCAACCTTCACAGCTACTT+CGG | 0.587180 | 8.1:-46294058 | MS.gene34667:intron |
| TATGAAGAAGAAGAATCAAG+AGG | 0.594680 | 8.1:-46307532 | MS.gene34667:CDS |
| ATTTAGTTGAACAAAACAAG+AGG | 0.594935 | 8.1:-46307891 | MS.gene34667:CDS |
| CATAGAGTATCTCATCACAA+AGG | 0.599796 | 8.1:-46295713 | MS.gene34667:CDS |
| TTGTCAGAGATAACGATGAT+GGG | 0.602337 | 8.1:-46295745 | MS.gene34667:CDS |
| CTCAAGGAAAGATTAAGAAG+TGG | 0.603788 | 8.1:-46304125 | MS.gene34667:CDS |
| TGCGTGGCCACAAATTCTGA+GGG | 0.604567 | 8.1:+46305321 | None:intergenic |
| AATTTGAGGAGCCGAAAACA+AGG | 0.607900 | 8.1:-46297186 | MS.gene34667:CDS |
| AACAGAGTACTCTGTTCTGG+TGG | 0.608387 | 8.1:-46307761 | MS.gene34667:CDS |
| TCACAAAGAGAATGAGGTCA+AGG | 0.608502 | 8.1:-46304440 | MS.gene34667:CDS |
| AGCCATTTCAACAAGACCAT+AGG | 0.609905 | 8.1:-46305067 | MS.gene34667:CDS |
| TGATGAGGATGAATTTGAGT+GGG | 0.611519 | 8.1:-46306798 | MS.gene34667:CDS |
| ATAGAGAGTGAAGAAAGAGA+GGG | 0.612047 | 8.1:-46307787 | MS.gene34667:CDS |
| GACCAGTTTCTGGCTCAAGT+GGG | 0.613561 | 8.1:-46294924 | MS.gene34667:CDS |
| GTAGAAGGAGAGAAAACTCA+AGG | 0.618624 | 8.1:-46304141 | MS.gene34667:CDS |
| TGGAAGGAATGCTCATGAGA+CGG | 0.625238 | 8.1:+46299853 | None:intergenic |
| AAATTATACCTACGAAGTCG+TGG | 0.625764 | 8.1:+46305146 | None:intergenic |
| CCTCATCCAACGGTTTCTAG+AGG | 0.633091 | 8.1:-46296268 | MS.gene34667:CDS |
| GATTCAAATCTTGATCAAGA+TGG | 0.633810 | 8.1:-46307595 | MS.gene34667:CDS |
| ATGATGAGGATGAATTTGAG+TGG | 0.634660 | 8.1:-46306799 | MS.gene34667:CDS |
| CAAACCTGAATATGTATGTG+AGG | 0.635163 | 8.1:+46308029 | None:intergenic |
| GTATGTGAGGATCAACCCCA+TGG | 0.637617 | 8.1:+46308042 | None:intergenic |
| ATGATTCTCCACGACTTCGT+AGG | 0.639610 | 8.1:-46305154 | MS.gene34667:CDS |
| TTACATGACGGATCCATGGA+AGG | 0.640628 | 8.1:+46299837 | None:intergenic |
| TGAGGAAGATGAAGATGATG+AGG | 0.646536 | 8.1:-46306813 | MS.gene34667:CDS |
| AAATTCTGAGGGATCACTAG+AGG | 0.650815 | 8.1:+46305332 | None:intergenic |
| TCACAAAGGGAATGAGCTCG+AGG | 0.655780 | 8.1:-46295699 | MS.gene34667:CDS |
| AATTGTGTGGGGTGACGAGG+AGG | 0.660762 | 8.1:-46295831 | MS.gene34667:CDS |
| GAAAAGAAAGAAATTGTGTG+GGG | 0.678750 | 8.1:-46295842 | MS.gene34667:CDS |
| GAGGAAGAGCCAATTCAACA+AGG | 0.687089 | 8.1:-46296249 | MS.gene34667:CDS |
| GTGTGATAGAGAAGAAGACT+CGG | 0.687344 | 8.1:-46306906 | MS.gene34667:CDS |
| CAAAGGGAATGAGCTCGAGG+AGG | 0.703131 | 8.1:-46295696 | MS.gene34667:CDS |
| AAGGAATGCTCATGAGACGG+CGG | 0.710866 | 8.1:+46299856 | None:intergenic |
| TTGAGGAGCCGAAAACAAGG+AGG | 0.720071 | 8.1:-46297183 | MS.gene34667:CDS |
| ATTTGAGTGGGAGAATGATG+AGG | 0.727491 | 8.1:-46306786 | MS.gene34667:CDS |
| ACTATGTGGTTCATTCCATG+GGG | 0.728697 | 8.1:-46308057 | MS.gene34667:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.1 | gene | 46294034 | 46308203 | 46294034 | ID=MS.gene34667 |
| chr8.1 | mRNA | 46294034 | 46308203 | 46294034 | ID=MS.gene34667.t1;Parent=MS.gene34667 |
| chr8.1 | exon | 46308034 | 46308203 | 46308034 | ID=MS.gene34667.t1.exon1;Parent=MS.gene34667.t1 |
| chr8.1 | CDS | 46308034 | 46308203 | 46308034 | ID=cds.MS.gene34667.t1;Parent=MS.gene34667.t1 |
| chr8.1 | exon | 46306537 | 46307948 | 46306537 | ID=MS.gene34667.t1.exon2;Parent=MS.gene34667.t1 |
| chr8.1 | CDS | 46306537 | 46307948 | 46306537 | ID=cds.MS.gene34667.t1;Parent=MS.gene34667.t1 |
| chr8.1 | exon | 46305003 | 46305422 | 46305003 | ID=MS.gene34667.t1.exon3;Parent=MS.gene34667.t1 |
| chr8.1 | CDS | 46305003 | 46305422 | 46305003 | ID=cds.MS.gene34667.t1;Parent=MS.gene34667.t1 |
| chr8.1 | exon | 46304390 | 46304622 | 46304390 | ID=MS.gene34667.t1.exon4;Parent=MS.gene34667.t1 |
| chr8.1 | CDS | 46304390 | 46304622 | 46304390 | ID=cds.MS.gene34667.t1;Parent=MS.gene34667.t1 |
| chr8.1 | exon | 46304115 | 46304211 | 46304115 | ID=MS.gene34667.t1.exon5;Parent=MS.gene34667.t1 |
| chr8.1 | CDS | 46304115 | 46304211 | 46304115 | ID=cds.MS.gene34667.t1;Parent=MS.gene34667.t1 |
| chr8.1 | exon | 46299841 | 46299898 | 46299841 | ID=MS.gene34667.t1.exon6;Parent=MS.gene34667.t1 |
| chr8.1 | CDS | 46299841 | 46299898 | 46299841 | ID=cds.MS.gene34667.t1;Parent=MS.gene34667.t1 |
| chr8.1 | exon | 46297388 | 46297524 | 46297388 | ID=MS.gene34667.t1.exon7;Parent=MS.gene34667.t1 |
| chr8.1 | CDS | 46297388 | 46297524 | 46297388 | ID=cds.MS.gene34667.t1;Parent=MS.gene34667.t1 |
| chr8.1 | exon | 46296980 | 46297261 | 46296980 | ID=MS.gene34667.t1.exon8;Parent=MS.gene34667.t1 |
| chr8.1 | CDS | 46296980 | 46297261 | 46296980 | ID=cds.MS.gene34667.t1;Parent=MS.gene34667.t1 |
| chr8.1 | exon | 46296178 | 46296492 | 46296178 | ID=MS.gene34667.t1.exon9;Parent=MS.gene34667.t1 |
| chr8.1 | CDS | 46296178 | 46296492 | 46296178 | ID=cds.MS.gene34667.t1;Parent=MS.gene34667.t1 |
| chr8.1 | exon | 46295649 | 46295878 | 46295649 | ID=MS.gene34667.t1.exon10;Parent=MS.gene34667.t1 |
| chr8.1 | CDS | 46295649 | 46295878 | 46295649 | ID=cds.MS.gene34667.t1;Parent=MS.gene34667.t1 |
| chr8.1 | exon | 46294905 | 46295027 | 46294905 | ID=MS.gene34667.t1.exon11;Parent=MS.gene34667.t1 |
| chr8.1 | CDS | 46294905 | 46295027 | 46294905 | ID=cds.MS.gene34667.t1;Parent=MS.gene34667.t1 |
| chr8.1 | exon | 46294034 | 46294066 | 46294034 | ID=MS.gene34667.t1.exon12;Parent=MS.gene34667.t1 |
| chr8.1 | CDS | 46294034 | 46294066 | 46294034 | ID=cds.MS.gene34667.t1;Parent=MS.gene34667.t1 |
| Gene Sequence |
| Protein sequence |
