Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene053512.t1 | XP_028226635.1 | 87.1 | 139 | 18 | 0 | 456 | 594 | 219 | 357 | 2.10E-64 | 257.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene053512.t1 | Q9SQT8 | 53.0 | 134 | 63 | 0 | 459 | 592 | 302 | 435 | 3.1e-37 | 158.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene053512.t1 | A0A0R0KP46 | 87.1 | 139 | 18 | 0 | 456 | 594 | 219 | 357 | 1.5e-64 | 257.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene053512 | MS.gene053974 | 0.825629 | 4.22E-54 | -1.69E-46 |
| MS.gene053512 | MS.gene055875 | 0.802293 | 6.01E-49 | -1.69E-46 |
| MS.gene053512 | MS.gene059459 | 0.806152 | 9.45E-50 | -1.69E-46 |
| MS.gene053512 | MS.gene063846 | 0.804854 | 1.77E-49 | -1.69E-46 |
| MS.gene053512 | MS.gene067656 | 0.805683 | 1.19E-49 | -1.69E-46 |
| MS.gene053512 | MS.gene068012 | 0.807497 | 4.91E-50 | -1.69E-46 |
| MS.gene053512 | MS.gene24211 | 0.810602 | 1.06E-50 | -1.69E-46 |
| MS.gene053512 | MS.gene26056 | 0.811556 | 6.60E-51 | -1.69E-46 |
| MS.gene053512 | MS.gene26643 | 0.832341 | 9.99E-56 | -1.69E-46 |
| MS.gene053512 | MS.gene30073 | 0.803665 | 3.13E-49 | -1.69E-46 |
| MS.gene053512 | MS.gene34667 | 0.800623 | 1.32E-48 | -1.69E-46 |
| MS.gene053512 | MS.gene38429 | 0.80076 | 1.24E-48 | -1.69E-46 |
| MS.gene053512 | MS.gene39656 | 0.824059 | 9.91E-54 | -1.69E-46 |
| MS.gene053512 | MS.gene41240 | 0.813148 | 2.96E-51 | -1.69E-46 |
| MS.gene053512 | MS.gene45794 | 0.806675 | 7.33E-50 | -1.69E-46 |
| MS.gene053512 | MS.gene48704 | 0.806793 | 6.92E-50 | -1.69E-46 |
| MS.gene053512 | MS.gene52525 | 0.814549 | 1.46E-51 | -1.69E-46 |
| MS.gene053512 | MS.gene58638 | 0.823488 | 1.35E-53 | -1.69E-46 |
| MS.gene053512 | MS.gene59780 | 0.80827 | 3.36E-50 | -1.69E-46 |
| MS.gene053512 | MS.gene61898 | 0.819629 | 1.05E-52 | -1.69E-46 |
| MS.gene053512 | MS.gene62748 | 0.808739 | 2.67E-50 | -1.69E-46 |
| MS.gene053512 | MS.gene64567 | 0.826074 | 3.31E-54 | -1.69E-46 |
| MS.gene053512 | MS.gene66682 | 0.812883 | 3.39E-51 | -1.69E-46 |
| MS.gene053512 | MS.gene76389 | 0.832927 | 7.15E-56 | -1.69E-46 |
| MS.gene053512 | MS.gene78647 | 0.830347 | 3.09E-55 | -1.69E-46 |
| MS.gene053512 | MS.gene82962 | 0.815603 | 8.49E-52 | -1.69E-46 |
| MS.gene053512 | MS.gene84968 | 0.812496 | 4.12E-51 | -1.69E-46 |
| MS.gene053512 | MS.gene85301 | 0.805737 | 1.16E-49 | -1.69E-46 |
| MS.gene053512 | MS.gene85694 | 0.829614 | 4.67E-55 | -1.69E-46 |
| MS.gene053512 | MS.gene88112 | 0.807681 | 4.49E-50 | -1.69E-46 |
| MS.gene053512 | MS.gene88548 | 0.802228 | 6.20E-49 | -1.69E-46 |
| MS.gene053512 | MS.gene98550 | 0.821692 | 3.53E-53 | -1.69E-46 |
| MS.gene053512 | MS.gene98774 | 0.837091 | 6.38E-57 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene053512.t1 | MTR_7g114190 | 50.345 | 145 | 26 | 3 | 456 | 598 | 103 | 203 | 7.24e-30 | 120 |
| MS.gene053512.t1 | MTR_4g090620 | 51.402 | 107 | 49 | 1 | 486 | 592 | 229 | 332 | 4.34e-27 | 116 |
| MS.gene053512.t1 | MTR_4g090620 | 47.500 | 80 | 42 | 0 | 625 | 704 | 14 | 93 | 5.96e-18 | 88.2 |
| MS.gene053512.t1 | MTR_7g112350 | 34.466 | 206 | 115 | 5 | 244 | 429 | 291 | 496 | 1.09e-21 | 99.8 |
| MS.gene053512.t1 | MTR_1g083810 | 34.951 | 206 | 114 | 5 | 244 | 429 | 291 | 496 | 1.61e-21 | 99.4 |
| MS.gene053512.t1 | MTR_2g034900 | 34.928 | 209 | 110 | 7 | 244 | 429 | 290 | 495 | 1.31e-20 | 96.7 |
| MS.gene053512.t1 | MTR_4g133040 | 33.188 | 229 | 127 | 6 | 249 | 455 | 227 | 451 | 3.98e-20 | 94.7 |
| MS.gene053512.t1 | MTR_4g131510 | 33.333 | 180 | 106 | 3 | 264 | 429 | 239 | 418 | 1.02e-18 | 89.7 |
| MS.gene053512.t1 | MTR_4g121435 | 32.065 | 184 | 111 | 3 | 261 | 430 | 317 | 500 | 2.05e-18 | 89.7 |
| MS.gene053512.t1 | MTR_8g027585 | 33.014 | 209 | 114 | 8 | 244 | 429 | 206 | 411 | 2.31e-17 | 85.9 |
| MS.gene053512.t1 | MTR_4g133030 | 34.272 | 213 | 117 | 5 | 239 | 429 | 205 | 416 | 2.82e-17 | 85.9 |
| MS.gene053512.t1 | MTR_7g112150 | 33.939 | 165 | 95 | 4 | 278 | 429 | 350 | 513 | 4.80e-15 | 79.0 |
| MS.gene053512.t1 | MTR_4g132980 | 31.068 | 206 | 122 | 5 | 244 | 429 | 56 | 261 | 1.21e-14 | 76.3 |
| MS.gene053512.t1 | MTR_4g132960 | 34.884 | 172 | 95 | 3 | 265 | 429 | 3 | 164 | 1.78e-14 | 73.6 |
| MS.gene053512.t1 | MTR_4g132980 | 31.068 | 206 | 122 | 5 | 244 | 429 | 184 | 389 | 3.09e-14 | 76.3 |
| MS.gene053512.t1 | MTR_4g127570 | 31.633 | 196 | 114 | 5 | 289 | 470 | 192 | 381 | 3.50e-14 | 75.9 |
| MS.gene053512.t1 | MTR_7g112160 | 34.302 | 172 | 94 | 6 | 264 | 429 | 337 | 495 | 7.38e-14 | 75.1 |
| MS.gene053512.t1 | MTR_1g053470 | 32.934 | 167 | 96 | 4 | 277 | 429 | 128 | 292 | 1.31e-12 | 69.7 |
| MS.gene053512.t1 | MTR_1g053470 | 32.934 | 167 | 96 | 4 | 277 | 429 | 128 | 292 | 1.43e-12 | 69.7 |
| MS.gene053512.t1 | MTR_1g053470 | 32.934 | 167 | 96 | 4 | 277 | 429 | 128 | 292 | 3.78e-12 | 68.9 |
| MS.gene053512.t1 | MTR_4g132967 | 38.760 | 129 | 72 | 2 | 265 | 386 | 7 | 135 | 1.04e-11 | 65.1 |
| MS.gene053512.t1 | MTR_4g013265 | 31.973 | 147 | 85 | 3 | 298 | 429 | 145 | 291 | 1.50e-11 | 66.6 |
| MS.gene053512.t1 | MTR_4g131000 | 33.077 | 130 | 73 | 3 | 290 | 405 | 263 | 392 | 5.04e-11 | 65.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene053512.t1 | AT3G06350 | 52.985 | 134 | 63 | 0 | 459 | 592 | 302 | 435 | 1.64e-40 | 157 |
| MS.gene053512.t1 | AT3G06350 | 58.333 | 60 | 24 | 1 | 640 | 699 | 119 | 177 | 9.81e-14 | 75.1 |
| MS.gene053512.t1 | AT4G02150 | 35.556 | 180 | 102 | 3 | 264 | 429 | 318 | 497 | 9.80e-21 | 97.1 |
| MS.gene053512.t1 | AT1G09270 | 36.111 | 180 | 101 | 3 | 264 | 429 | 322 | 501 | 8.51e-19 | 90.9 |
| MS.gene053512.t1 | AT1G09270 | 36.111 | 180 | 101 | 3 | 264 | 429 | 322 | 501 | 8.51e-19 | 90.9 |
| MS.gene053512.t1 | AT1G09270 | 36.111 | 180 | 101 | 3 | 264 | 429 | 240 | 419 | 1.32e-18 | 89.7 |
| MS.gene053512.t1 | AT3G06720 | 31.081 | 222 | 133 | 6 | 228 | 429 | 273 | 494 | 1.39e-18 | 90.1 |
| MS.gene053512.t1 | AT3G06720 | 31.081 | 222 | 133 | 6 | 228 | 429 | 273 | 494 | 1.39e-18 | 90.1 |
| MS.gene053512.t1 | AT1G02690 | 33.333 | 225 | 124 | 7 | 228 | 429 | 277 | 498 | 2.23e-18 | 89.7 |
| MS.gene053512.t1 | AT1G02690 | 33.333 | 225 | 124 | 7 | 228 | 429 | 278 | 499 | 2.31e-18 | 89.7 |
| MS.gene053512.t1 | AT3G05720 | 32.174 | 230 | 127 | 7 | 228 | 429 | 261 | 489 | 1.45e-16 | 84.0 |
| MS.gene053512.t1 | AT3G05720 | 32.174 | 230 | 127 | 7 | 228 | 429 | 261 | 489 | 1.45e-16 | 84.0 |
| MS.gene053512.t1 | AT4G16143 | 35.256 | 156 | 87 | 3 | 288 | 429 | 344 | 499 | 3.67e-16 | 82.4 |
| MS.gene053512.t1 | AT4G16143 | 35.256 | 156 | 87 | 3 | 288 | 429 | 344 | 499 | 3.67e-16 | 82.4 |
| MS.gene053512.t1 | AT5G49310 | 31.928 | 166 | 99 | 4 | 274 | 428 | 326 | 488 | 5.19e-13 | 72.4 |
Find 141 sgRNAs with CRISPR-Local
Find 325 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGAGATGACACAATTATTTC+TGG | 0.143101 | 4.3:+26837138 | MS.gene053512:CDS |
| CTTAGAACTTCTTCCTTATA+TGG | 0.180690 | 4.3:-26839669 | None:intergenic |
| TTCATGGAGATTACGATAAT+TGG | 0.205655 | 4.3:+26840964 | MS.gene053512:CDS |
| ATTTACATGTTCCAATTTAT+AGG | 0.221915 | 4.3:-26839334 | None:intergenic |
| TTTAAAACTAATGGAAAATA+TGG | 0.231904 | 4.3:+26837740 | MS.gene053512:CDS |
| AATTCAATCTTTAAAACTAA+TGG | 0.253447 | 4.3:+26837731 | MS.gene053512:CDS |
| GATCTGTTAGTACTATTATA+AGG | 0.259152 | 4.3:+26840278 | MS.gene053512:CDS |
| TGCCTTCTCTTGATAGTCTA+TGG | 0.261333 | 4.3:+26839307 | MS.gene053512:CDS |
| CAGTGTTGGGATTCCATATA+AGG | 0.269255 | 4.3:+26839656 | MS.gene053512:intron |
| CATATAAGGAAGAAGTTCTA+AGG | 0.272923 | 4.3:+26839670 | MS.gene053512:CDS |
| CAGCATAGATATTTGTTATA+AGG | 0.279434 | 4.3:+26838729 | MS.gene053512:CDS |
| GGGCCTTTGCTGTGGCTAAC+TGG | 0.287307 | 4.3:-26839390 | None:intergenic |
| AAGGAAGGATTATGCAATAT+AGG | 0.314161 | 4.3:-26839411 | None:intergenic |
| CTCTGCATGAGCAGCGTCTT+GGG | 0.317849 | 4.3:-26837571 | None:intergenic |
| TCTATGGGAAGCCTATAAAT+TGG | 0.322705 | 4.3:+26839323 | MS.gene053512:CDS |
| ATCACACTCTACCAGTTTAT+AGG | 0.322852 | 4.3:+26840256 | MS.gene053512:intron |
| GCGTAATTAGGCATCATCTT+AGG | 0.328127 | 4.3:+26838803 | MS.gene053512:CDS |
| TGCCCATTCTTATTGTTTAT+AGG | 0.333725 | 4.3:+26842150 | MS.gene053512:CDS |
| AGAGATTGATTAAGGAGTTA+TGG | 0.343303 | 4.3:+26837640 | MS.gene053512:CDS |
| ACAAAATGAAGATATGGATT+TGG | 0.344357 | 4.3:+26838579 | MS.gene053512:CDS |
| GAGATTGATTAAGGAGTTAT+GGG | 0.355333 | 4.3:+26837641 | MS.gene053512:CDS |
| TGATACTCAGAGATTGATTA+AGG | 0.355434 | 4.3:+26837632 | MS.gene053512:CDS |
| TCTTAGGAGGATGGATGATA+TGG | 0.357527 | 4.3:+26838819 | MS.gene053512:CDS |
| CTATCAAGAGAAGGCAGGCC+AGG | 0.367650 | 4.3:-26839300 | None:intergenic |
| TATCTATGCTGTCGTCAAAC+TGG | 0.369372 | 4.3:-26838717 | None:intergenic |
| TCTTCTACAAAATGAAGATA+TGG | 0.375316 | 4.3:+26838573 | MS.gene053512:CDS |
| TTCTGATAATTACAGGTCAT+TGG | 0.376557 | 4.3:+26838519 | MS.gene053512:intron |
| AGTAAAATCAGGACTTGAAT+AGG | 0.378990 | 4.3:-26839502 | None:intergenic |
| GAGGAGAAATTAGCGTAATT+AGG | 0.389226 | 4.3:+26838791 | MS.gene053512:CDS |
| AGGAAGGATTATGCAATATA+GGG | 0.404719 | 4.3:-26839410 | None:intergenic |
| GAAGCATTAATGCTTTGCTT+TGG | 0.406928 | 4.3:+26842319 | MS.gene053512:CDS |
| TCTTCTTCTTGTTGCAATAC+CGG | 0.407952 | 4.3:-26837268 | None:intergenic |
| GAGGATCCAGCGGTCAGATT+AGG | 0.410986 | 4.3:+26838438 | MS.gene053512:CDS |
| TTCTCTAACTCTTGAAGCAT+TGG | 0.415507 | 4.3:-26838665 | None:intergenic |
| TCATAAAGAAGCAGAGGATA+AGG | 0.416162 | 4.3:+26837210 | MS.gene053512:CDS |
| ATGCTTTGCTTTGGAATTGA+GGG | 0.417627 | 4.3:+26842328 | MS.gene053512:CDS |
| GGTCTGTTGCTCACATACTA+TGG | 0.417778 | 4.3:+26840985 | MS.gene053512:CDS |
| TGGAAACATTTATCACATAC+AGG | 0.422406 | 4.3:+26838331 | MS.gene053512:CDS |
| TATTCCGACAAACAATCTTT+CGG | 0.427923 | 4.3:-26838292 | None:intergenic |
| CATTCTCAGTGACATGGTTC+AGG | 0.428796 | 4.3:+26842025 | MS.gene053512:CDS |
| GTGCTGATGTAGTGGAGGTT+AGG | 0.429365 | 4.3:+26842060 | MS.gene053512:CDS |
| ACATACTTTAATCAAAGATA+TGG | 0.431533 | 4.3:+26838769 | MS.gene053512:CDS |
| CCAACATGCTTGCCATCTCT+TGG | 0.431535 | 4.3:-26840304 | None:intergenic |
| ATCTGTTAGTACTATTATAA+GGG | 0.432481 | 4.3:+26840279 | MS.gene053512:CDS |
| TAAGATGATCAACAAACATT+GGG | 0.435125 | 4.3:-26839464 | None:intergenic |
| TCACCTATAAACAATAAGAA+TGG | 0.437112 | 4.3:-26842153 | None:intergenic |
| AATGCTTTGCTTTGGAATTG+AGG | 0.447451 | 4.3:+26842327 | MS.gene053512:CDS |
| AGAGAAGGCAGGCCAGGGAT+TGG | 0.451583 | 4.3:-26839294 | None:intergenic |
| GCAATTGAAGATGCACTCAT+AGG | 0.453107 | 4.3:+26840358 | MS.gene053512:CDS |
| TACAGGTCATTGGTTGGTAA+AGG | 0.453318 | 4.3:+26838529 | MS.gene053512:intron |
| TAGTGATCAAGATGGTTTGA+AGG | 0.465748 | 4.3:-26842118 | None:intergenic |
| TTAAAGGCCAAAGTGGGAAG+GGG | 0.466294 | 4.3:+26842264 | MS.gene053512:intron |
| ATAAGGCAGCTCAGATTGTA+TGG | 0.466671 | 4.3:+26838746 | MS.gene053512:CDS |
| TACCTAAAACCAGTAAAATC+AGG | 0.467618 | 4.3:-26839513 | None:intergenic |
| CACCTATAAACAATAAGAAT+GGG | 0.476115 | 4.3:-26842152 | None:intergenic |
| TCTCTGCATGAGCAGCGTCT+TGG | 0.480603 | 4.3:-26837572 | None:intergenic |
| GATAATTACAGGTCATTGGT+TGG | 0.485339 | 4.3:+26838523 | MS.gene053512:intron |
| CAAGATGGTTTGAAGGTCAC+GGG | 0.487248 | 4.3:-26842111 | None:intergenic |
| GCCTTCTCTTGATAGTCTAT+GGG | 0.494890 | 4.3:+26839308 | MS.gene053512:CDS |
| ATTACTCAATCTCTTTCTAG+TGG | 0.495119 | 4.3:-26837835 | None:intergenic |
| GATAAATAAGTTGTACAATC+AGG | 0.498114 | 4.3:+26837458 | MS.gene053512:CDS |
| AATATTGCCGACATCATAGT+TGG | 0.498308 | 4.3:+26838311 | MS.gene053512:CDS |
| TTAAGATGATCAACAAACAT+TGG | 0.500860 | 4.3:-26839465 | None:intergenic |
| CATGGTTCAGGCAAAGGCAC+AGG | 0.504185 | 4.3:+26842037 | MS.gene053512:CDS |
| ATTAAAGGCCAAAGTGGGAA+GGG | 0.507938 | 4.3:+26842263 | MS.gene053512:intron |
| TAGGAGGATGGATGATATGG+AGG | 0.510278 | 4.3:+26838822 | MS.gene053512:CDS |
| AATCAGGACAAAGTACTTTG+TGG | 0.513984 | 4.3:+26837474 | MS.gene053512:CDS |
| AATTCTCAATGTCTCAGACT+TGG | 0.515740 | 4.3:+26838630 | MS.gene053512:CDS |
| CTACAGAAACAGCCTTCTCC+AGG | 0.516754 | 4.3:+26837915 | MS.gene053512:CDS |
| GTATCCGAAAGATTGTTTGT+CGG | 0.523699 | 4.3:+26838288 | MS.gene053512:CDS |
| GAACATGTCATGAAGGAGGC+TGG | 0.524001 | 4.3:+26838389 | MS.gene053512:CDS |
| CAGTGACATGGTTCAGGCAA+AGG | 0.525377 | 4.3:+26842031 | MS.gene053512:CDS |
| GAAAGAAACTGAAGAAGAAG+AGG | 0.525553 | 4.3:-26838239 | None:intergenic |
| AACATACCTAATCTGACCGC+TGG | 0.531171 | 4.3:-26838444 | None:intergenic |
| TGAAGTCCATCCACTTGCTC+AGG | 0.532080 | 4.3:+26839701 | MS.gene053512:CDS |
| AATGGAAAATATGGTTGAAG+AGG | 0.532350 | 4.3:+26837749 | MS.gene053512:CDS |
| ATACAAGGATGTTCATAAGA+AGG | 0.533212 | 4.3:+26837536 | MS.gene053512:CDS |
| GATTAAAGGCCAAAGTGGGA+AGG | 0.537462 | 4.3:+26842262 | MS.gene053512:intron |
| ATGGTTGAAGATACAGAAGA+AGG | 0.542923 | 4.3:+26837786 | MS.gene053512:CDS |
| GGCACAGGGTGCTGATGTAG+TGG | 0.544600 | 4.3:+26842052 | MS.gene053512:CDS |
| TATGGTTGAAGAGGGAAATG+TGG | 0.544932 | 4.3:+26837758 | MS.gene053512:CDS |
| TTCAGACATGTAAACTGTGA+TGG | 0.548603 | 4.3:+26839432 | MS.gene053512:CDS |
| TTGGCAAGAAATCCAATCCC+TGG | 0.548937 | 4.3:+26839282 | MS.gene053512:intron |
| CGGTTTATTAGTGATCAAGA+TGG | 0.549373 | 4.3:-26842126 | None:intergenic |
| CCAAGAGATGGCAAGCATGT+TGG | 0.552059 | 4.3:+26840304 | MS.gene053512:CDS |
| ATGGAAAATATGGTTGAAGA+GGG | 0.555288 | 4.3:+26837750 | MS.gene053512:CDS |
| ATCAGTAATGCCGTGTCAAG+AGG | 0.557498 | 4.3:+26838419 | MS.gene053512:CDS |
| AAAAGAAGAACATGTCATGA+AGG | 0.559959 | 4.3:+26838382 | MS.gene053512:CDS |
| ACAAATCGATTTAATCAGAC+CGG | 0.565268 | 4.3:+26837249 | MS.gene053512:CDS |
| GCGATGGAAAGAGCTGATGA+AGG | 0.565767 | 4.3:+26837809 | MS.gene053512:CDS |
| ATCACAGTTTACATGTCTGA+AGG | 0.565814 | 4.3:-26839430 | None:intergenic |
| TCAAGATGGTTTGAAGGTCA+CGG | 0.565983 | 4.3:-26842112 | None:intergenic |
| GCAATATAGGGCCTTTGCTG+TGG | 0.572216 | 4.3:-26839398 | None:intergenic |
| AGCAAAACGTAAAGAAACAT+TGG | 0.573405 | 4.3:+26837683 | MS.gene053512:CDS |
| TAAAGGCCAAAGTGGGAAGG+GGG | 0.574966 | 4.3:+26842265 | MS.gene053512:intron |
| ATAGTGAACGAATTAGAGAA+AGG | 0.576186 | 4.3:+26837603 | MS.gene053512:CDS |
| AGAAGCTCATAAAGAAGCAG+AGG | 0.576877 | 4.3:+26837204 | MS.gene053512:CDS |
| CAGTTTACATGTCTGAAGGA+AGG | 0.577076 | 4.3:-26839426 | None:intergenic |
| CGACGATGAGAACACACGGT+TGG | 0.578611 | 4.3:+26842297 | MS.gene053512:CDS |
| TAGGCATCATCTTAGGAGGA+TGG | 0.580369 | 4.3:+26838810 | MS.gene053512:CDS |
| AGTTAACCTGAGCAAGTGGA+TGG | 0.580451 | 4.3:-26839707 | None:intergenic |
| TATCAAGAGAAGGCAGGCCA+GGG | 0.582217 | 4.3:-26839299 | None:intergenic |
| AATGTTTCCAACTATGATGT+CGG | 0.587046 | 4.3:-26838318 | None:intergenic |
| GTGCACTGTTGAAAGACAAT+GGG | 0.589547 | 4.3:+26841007 | MS.gene053512:CDS |
| TGGTTGAAGATACAGAAGAA+GGG | 0.590683 | 4.3:+26837787 | MS.gene053512:CDS |
| GGTTGGTAAAGGTTGCATAG+AGG | 0.594171 | 4.3:+26838540 | MS.gene053512:CDS |
| TAATTAGGCATCATCTTAGG+AGG | 0.597595 | 4.3:+26838806 | MS.gene053512:CDS |
| AAGATACAGAAGAAGGGCGA+TGG | 0.598736 | 4.3:+26837793 | MS.gene053512:CDS |
| AAGAAGAAGATTTACTTGAG+AGG | 0.601443 | 4.3:+26837281 | MS.gene053512:CDS |
| TTTAGAAGAAGATATCAGAA+AGG | 0.601455 | 4.3:+26837324 | MS.gene053512:CDS |
| GTAGATATAATACCTGGAGA+AGG | 0.601847 | 4.3:-26837927 | None:intergenic |
| AGAGGGAAATGTGGAACAGA+TGG | 0.605521 | 4.3:+26837767 | MS.gene053512:CDS |
| ATAGACTATCAAGAGAAGGC+AGG | 0.605535 | 4.3:-26839305 | None:intergenic |
| CACAGTTCAACAATCTGTCG+TGG | 0.608606 | 4.3:+26841998 | MS.gene053512:intron |
| GGACAGTTAACCTGAGCAAG+TGG | 0.608841 | 4.3:-26839711 | None:intergenic |
| TCCCATAGACTATCAAGAGA+AGG | 0.609100 | 4.3:-26839309 | None:intergenic |
| TACTTTAATCAAAGATATGG+AGG | 0.612907 | 4.3:+26838772 | MS.gene053512:CDS |
| TATTTGATTAAAGGCCAAAG+TGG | 0.616409 | 4.3:+26842257 | MS.gene053512:intron |
| ATTATAAGGGAACCAAGAGA+TGG | 0.618091 | 4.3:+26840292 | MS.gene053512:CDS |
| ATTTGATTAAAGGCCAAAGT+GGG | 0.622919 | 4.3:+26842258 | MS.gene053512:intron |
| AGAAGAACATGTCATGAAGG+AGG | 0.625128 | 4.3:+26838385 | MS.gene053512:CDS |
| AACATTGGAGAGAATTACAA+AGG | 0.627386 | 4.3:+26837698 | MS.gene053512:CDS |
| ATGGAAAGAGCTGATGAAGG+AGG | 0.631971 | 4.3:+26837812 | MS.gene053512:CDS |
| AAACCAGTTAGCCACAGCAA+AGG | 0.631981 | 4.3:+26839387 | MS.gene053512:CDS |
| TGGTTATAATACAGATTGCG+AGG | 0.634670 | 4.3:+26840324 | MS.gene053512:CDS |
| ACAGGGTGCTGATGTAGTGG+AGG | 0.644651 | 4.3:+26842055 | MS.gene053512:CDS |
| ATGGTTCAGGCAAAGGCACA+GGG | 0.644734 | 4.3:+26842038 | MS.gene053512:CDS |
| TCAAGAGTTAGAGAATGCAA+AGG | 0.645507 | 4.3:+26838673 | MS.gene053512:CDS |
| GGAGCTCATTCTCAGTGACA+TGG | 0.645894 | 4.3:+26842019 | MS.gene053512:CDS |
| GGTGCACTGTTGAAAGACAA+TGG | 0.649027 | 4.3:+26841006 | MS.gene053512:CDS |
| AGCACAAAGGAAGAATACAT+TGG | 0.655216 | 4.3:+26838181 | MS.gene053512:intron |
| GATCAACAAACATTGGGACA+TGG | 0.660810 | 4.3:-26839458 | None:intergenic |
| GGAAACATTTATCACATACA+GGG | 0.668277 | 4.3:+26838332 | MS.gene053512:CDS |
| ACCGCTGGATCCTCTTGACA+CGG | 0.669556 | 4.3:-26838429 | None:intergenic |
| ATGGTTTGAAGGTCACGGGG+AGG | 0.672511 | 4.3:-26842107 | None:intergenic |
| TGACTTATTCTGCAGCACAA+AGG | 0.672868 | 4.3:+26838168 | MS.gene053512:intron |
| GCCGTGTCAAGAGGATCCAG+CGG | 0.673418 | 4.3:+26838428 | MS.gene053512:CDS |
| TAAACAATAAGAATGGGCAA+CGG | 0.686569 | 4.3:-26842146 | None:intergenic |
| GAGGTTGAAAATCTGTGATG+TGG | 0.699326 | 4.3:-26842088 | None:intergenic |
| ATGACGACGATGAGAACACA+CGG | 0.735348 | 4.3:+26842293 | MS.gene053512:CDS |
| AAGATGGTTTGAAGGTCACG+GGG | 0.746494 | 4.3:-26842110 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATAAATACAAACATTTAAA+TGG | - | chr4.3:26839617-26839636 | None:intergenic | 10.0% |
| !! | TGTTAAATTAATATATTTAC+GGG | + | chr4.3:26837960-26837979 | MS.gene053512:intron | 10.0% |
| !!! | TATATCAGAAATATTTTATT+AGG | + | chr4.3:26841171-26841190 | MS.gene053512:intron | 10.0% |
| !! | AATAAAAACACATATATTGA+AGG | - | chr4.3:26842241-26842260 | None:intergenic | 15.0% |
| !! | ATACTTGAATATAATCATAA+TGG | - | chr4.3:26842204-26842223 | None:intergenic | 15.0% |
| !! | TTGAAAAGTTAACTATTTAT+TGG | - | chr4.3:26837385-26837404 | None:intergenic | 15.0% |
| !!! | AATTCAATCTTTAAAACTAA+TGG | + | chr4.3:26837731-26837750 | MS.gene053512:CDS | 15.0% |
| !!! | ATGTGTTTTTATTTGATTAA+AGG | + | chr4.3:26842248-26842267 | MS.gene053512:intron | 15.0% |
| !!! | ATGTTGTTTTTAATTAGATT+TGG | + | chr4.3:26838462-26838481 | MS.gene053512:intron | 15.0% |
| !!! | TAGATAATTATTTTTGTAGA+TGG | - | chr4.3:26840610-26840629 | None:intergenic | 15.0% |
| !!! | TATGTTATGATATTTCTAAA+TGG | + | chr4.3:26838137-26838156 | MS.gene053512:intron | 15.0% |
| !!! | TTTAAAACTAATGGAAAATA+TGG | + | chr4.3:26837740-26837759 | MS.gene053512:CDS | 15.0% |
| !! | AATACATATTGAGGAAAAAA+AGG | + | chr4.3:26839820-26839839 | MS.gene053512:intron | 20.0% |
| !! | ACAAATAAATTGAGAAATGA+TGG | + | chr4.3:26840665-26840684 | MS.gene053512:intron | 20.0% |
| !! | ACATACTTTAATCAAAGATA+TGG | + | chr4.3:26838769-26838788 | MS.gene053512:CDS | 20.0% |
| !! | ATACAAACTAAAAAAGACTT+GGG | - | chr4.3:26839846-26839865 | None:intergenic | 20.0% |
| !! | ATCTGTTAGTACTATTATAA+GGG | + | chr4.3:26840279-26840298 | MS.gene053512:CDS | 20.0% |
| !! | ATTAATTTAACATAAAGCAG+AGG | - | chr4.3:26837952-26837971 | None:intergenic | 20.0% |
| !! | ATTACTGAAAAATCATTACA+TGG | - | chr4.3:26840216-26840235 | None:intergenic | 20.0% |
| !! | ATTTACATGTTCCAATTTAT+AGG | - | chr4.3:26839337-26839356 | None:intergenic | 20.0% |
| !! | ATTTATCAAAACACTTCATT+TGG | - | chr4.3:26840917-26840936 | None:intergenic | 20.0% |
| !! | CAACTTCAATAATTTATTTG+TGG | + | chr4.3:26841896-26841915 | MS.gene053512:intron | 20.0% |
| !! | GATTGTAAAAACATCTTAAA+TGG | - | chr4.3:26841557-26841576 | None:intergenic | 20.0% |
| !! | TATACAAACTAAAAAAGACT+TGG | - | chr4.3:26839847-26839866 | None:intergenic | 20.0% |
| !! | TCAAGTAATTGCTTATATTA+TGG | + | chr4.3:26837401-26837420 | MS.gene053512:intron | 20.0% |
| !! | TTATGAAGAAAAATTCCATT+TGG | + | chr4.3:26841689-26841708 | MS.gene053512:intron | 20.0% |
| !! | TTGGTGCATAAAATTTAAAA+CGG | + | chr4.3:26840169-26840188 | MS.gene053512:intron | 20.0% |
| !! | TTTCCTCAATATGTATTTAT+AGG | - | chr4.3:26839817-26839836 | None:intergenic | 20.0% |
| !!! | ACTTTTATTATCAAACCAAA+AGG | - | chr4.3:26841230-26841249 | None:intergenic | 20.0% |
| !!! | ATGAAGTGTTTTGATAAATT+AGG | + | chr4.3:26840918-26840937 | MS.gene053512:intron | 20.0% |
| !!! | ATTCAAGTTTTTAACAAAGT+TGG | - | chr4.3:26840560-26840579 | None:intergenic | 20.0% |
| !!! | TTATTTTAAAGCAACATGAT+TGG | - | chr4.3:26838078-26838097 | None:intergenic | 20.0% |
| !!! | TTTTTTCTTTTCTTTTTGTC+TGG | + | chr4.3:26841130-26841149 | MS.gene053512:intron | 20.0% |
| ! | AAAAACATCTTAAATGGACA+AGG | - | chr4.3:26841551-26841570 | None:intergenic | 25.0% |
| ! | AATGGTAAGAAATTCGTATA+TGG | + | chr4.3:26841438-26841457 | MS.gene053512:intron | 25.0% |
| ! | ACAAAATGAAGATATGGATT+TGG | + | chr4.3:26838579-26838598 | MS.gene053512:CDS | 25.0% |
| ! | AGTTATATGACCGTATAATT+TGG | + | chr4.3:26840006-26840025 | MS.gene053512:intron | 25.0% |
| ! | ATTCTTATTGTTTATAGGTG+AGG | + | chr4.3:26842155-26842174 | MS.gene053512:intron | 25.0% |
| ! | CAAGTTAAATATGACTATCA+TGG | - | chr4.3:26841742-26841761 | None:intergenic | 25.0% |
| ! | CACATAATGTTGACAAAAAT+TGG | + | chr4.3:26840150-26840169 | MS.gene053512:intron | 25.0% |
| ! | CACCTATAAACAATAAGAAT+GGG | - | chr4.3:26842155-26842174 | None:intergenic | 25.0% |
| ! | CTTATTCCTAATAATATCCA+TGG | - | chr4.3:26838896-26838915 | None:intergenic | 25.0% |
| ! | GAACTGAATTTATCATTTCA+AGG | - | chr4.3:26841667-26841686 | None:intergenic | 25.0% |
| ! | GATAAATAAGTTGTACAATC+AGG | + | chr4.3:26837458-26837477 | MS.gene053512:CDS | 25.0% |
| ! | GATATTACGTCAATTCTTAT+AGG | - | chr4.3:26840079-26840098 | None:intergenic | 25.0% |
| ! | GATCTGTTAGTACTATTATA+AGG | + | chr4.3:26840278-26840297 | MS.gene053512:CDS | 25.0% |
| ! | GTCAAATTGCAAATAATCTT+TGG | + | chr4.3:26840710-26840729 | MS.gene053512:intron | 25.0% |
| ! | GTTAATAGTTCCTATTTGTT+AGG | + | chr4.3:26839014-26839033 | MS.gene053512:intron | 25.0% |
| ! | TAAGATGATCAACAAACATT+GGG | - | chr4.3:26839467-26839486 | None:intergenic | 25.0% |
| ! | TAATATATTTACGGGTACAT+GGG | + | chr4.3:26837968-26837987 | MS.gene053512:intron | 25.0% |
| ! | TAATATTATTATCCCCCAAA+TGG | + | chr4.3:26840381-26840400 | MS.gene053512:intron | 25.0% |
| ! | TACTTTAATCAAAGATATGG+AGG | + | chr4.3:26838772-26838791 | MS.gene053512:CDS | 25.0% |
| ! | TCACCTATAAACAATAAGAA+TGG | - | chr4.3:26842156-26842175 | None:intergenic | 25.0% |
| ! | TCATAAAGTATAACTGTATG+AGG | + | chr4.3:26839165-26839184 | MS.gene053512:intron | 25.0% |
| ! | TCTCCTATAAATACATATTG+AGG | + | chr4.3:26839811-26839830 | MS.gene053512:intron | 25.0% |
| ! | TCTGAAAAGAAGATTTGTAT+CGG | - | chr4.3:26841922-26841941 | None:intergenic | 25.0% |
| ! | TCTGTATGATGATTATATGT+TGG | - | chr4.3:26841870-26841889 | None:intergenic | 25.0% |
| ! | TCTTCTACAAAATGAAGATA+TGG | + | chr4.3:26838573-26838592 | MS.gene053512:CDS | 25.0% |
| ! | TTAAGATGATCAACAAACAT+TGG | - | chr4.3:26839468-26839487 | None:intergenic | 25.0% |
| ! | TTAATATATTTACGGGTACA+TGG | + | chr4.3:26837967-26837986 | MS.gene053512:intron | 25.0% |
| ! | TTATTATGAATTGCAGTGTT+GGG | + | chr4.3:26839643-26839662 | MS.gene053512:intron | 25.0% |
| ! | TTGTTTCCATGGATATTATT+AGG | + | chr4.3:26838887-26838906 | MS.gene053512:intron | 25.0% |
| ! | TTTAGAAGAAGATATCAGAA+AGG | + | chr4.3:26837324-26837343 | MS.gene053512:CDS | 25.0% |
| ! | TTTATTATGAATTGCAGTGT+TGG | + | chr4.3:26839642-26839661 | MS.gene053512:intron | 25.0% |
| !! | AAATCTTCTTTTCAGACATA+TGG | + | chr4.3:26841926-26841945 | MS.gene053512:intron | 25.0% |
| !! | ACTATCAAATACTATTGACT+TGG | + | chr4.3:26840875-26840894 | MS.gene053512:intron | 25.0% |
| !! | TGTTACTTGTGTTTCTTTAT+AGG | + | chr4.3:26841099-26841118 | MS.gene053512:intron | 25.0% |
| !! | TTATTCTTCAAGAAACCTTT+TGG | + | chr4.3:26841212-26841231 | MS.gene053512:intron | 25.0% |
| !!! | CAGCATAGATATTTGTTATA+AGG | + | chr4.3:26838729-26838748 | MS.gene053512:CDS | 25.0% |
| !!! | GAACATGTAATTGGTTTTAA+TGG | + | chr4.3:26841420-26841439 | MS.gene053512:intron | 25.0% |
| !!! | GAGTCAACTTTCTTTTAAAA+TGG | + | chr4.3:26838004-26838023 | MS.gene053512:intron | 25.0% |
| !!! | TGTTTTGATAAATTAGGACT+TGG | + | chr4.3:26840924-26840943 | MS.gene053512:intron | 25.0% |
| AAAACACGTTCAACAATCTA+AGG | - | chr4.3:26838953-26838972 | None:intergenic | 30.0% | |
| AAAAGAAGAACATGTCATGA+AGG | + | chr4.3:26838382-26838401 | MS.gene053512:CDS | 30.0% | |
| AAAGACAGTTTCAACCATTT+GGG | - | chr4.3:26840398-26840417 | None:intergenic | 30.0% | |
| AACATTGGAGAGAATTACAA+AGG | + | chr4.3:26837698-26837717 | MS.gene053512:CDS | 30.0% | |
| AAGAAGAAGATTTACTTGAG+AGG | + | chr4.3:26837281-26837300 | MS.gene053512:CDS | 30.0% | |
| AAGGAAGGATTATGCAATAT+AGG | - | chr4.3:26839414-26839433 | None:intergenic | 30.0% | |
| AATGGAAAATATGGTTGAAG+AGG | + | chr4.3:26837749-26837768 | MS.gene053512:CDS | 30.0% | |
| AATGTTATATCCCTCTTGTA+TGG | + | chr4.3:26841045-26841064 | MS.gene053512:intron | 30.0% | |
| AATGTTTCCAACTATGATGT+CGG | - | chr4.3:26838321-26838340 | None:intergenic | 30.0% | |
| ACAAATTGAATAAAACGCCA+TGG | - | chr4.3:26839583-26839602 | None:intergenic | 30.0% | |
| ACTTATAGGAGGATGAATAT+AGG | - | chr4.3:26841823-26841842 | None:intergenic | 30.0% | |
| AGAGATTGATTAAGGAGTTA+TGG | + | chr4.3:26837640-26837659 | MS.gene053512:CDS | 30.0% | |
| AGCAAAACGTAAAGAAACAT+TGG | + | chr4.3:26837683-26837702 | MS.gene053512:CDS | 30.0% | |
| AGGAAGGATTATGCAATATA+GGG | - | chr4.3:26839413-26839432 | None:intergenic | 30.0% | |
| AGTAAAATCAGGACTTGAAT+AGG | - | chr4.3:26839505-26839524 | None:intergenic | 30.0% | |
| ATACAAGGATGTTCATAAGA+AGG | + | chr4.3:26837536-26837555 | MS.gene053512:CDS | 30.0% | |
| ATACATACCGCCAAATTATA+CGG | - | chr4.3:26840019-26840038 | None:intergenic | 30.0% | |
| ATAGGAGAGAAGAACTATTA+TGG | - | chr4.3:26839799-26839818 | None:intergenic | 30.0% | |
| ATAGTGAACGAATTAGAGAA+AGG | + | chr4.3:26837603-26837622 | MS.gene053512:CDS | 30.0% | |
| ATATTGTTTCACAACCTCTT+TGG | - | chr4.3:26840531-26840550 | None:intergenic | 30.0% | |
| ATGCAAAGGATTGAAAAAGT+TGG | + | chr4.3:26838687-26838706 | MS.gene053512:CDS | 30.0% | |
| ATGGAAAATATGGTTGAAGA+GGG | + | chr4.3:26837750-26837769 | MS.gene053512:CDS | 30.0% | |
| ATTACTCAATCTCTTTCTAG+TGG | - | chr4.3:26837838-26837857 | None:intergenic | 30.0% | |
| ATTTGATTAAAGGCCAAAGT+GGG | + | chr4.3:26842258-26842277 | MS.gene053512:intron | 30.0% | |
| ATTTGTATTACTGATGTGAG+GGG | + | chr4.3:26840753-26840772 | MS.gene053512:intron | 30.0% | |
| CATATAAGGAAGAAGTTCTA+AGG | + | chr4.3:26839670-26839689 | MS.gene053512:CDS | 30.0% | |
| CATTTGTATTACTGATGTGA+GGG | + | chr4.3:26840752-26840771 | MS.gene053512:intron | 30.0% | |
| CTTAGAACTTCTTCCTTATA+TGG | - | chr4.3:26839672-26839691 | None:intergenic | 30.0% | |
| CTTATAGGAGGATGAATATA+GGG | - | chr4.3:26841822-26841841 | None:intergenic | 30.0% | |
| CTTGAACTTGTCAAATGAAT+CGG | + | chr4.3:26840429-26840448 | MS.gene053512:intron | 30.0% | |
| GAGATTGATTAAGGAGTTAT+GGG | + | chr4.3:26837641-26837660 | MS.gene053512:CDS | 30.0% | |
| GAGGAGAAATTAGTGTAATT+AGG | + | chr4.3:26838841-26838860 | MS.gene053512:intron | 30.0% | |
| GGAAACATTTATCACATACA+GGG | + | chr4.3:26838332-26838351 | MS.gene053512:CDS | 30.0% | |
| GGAACTATTAACTACATGAT+AGG | - | chr4.3:26839006-26839025 | None:intergenic | 30.0% | |
| GTCAATCAAATGCTATATAC+AGG | - | chr4.3:26840647-26840666 | None:intergenic | 30.0% | |
| TAAACAATAAGAATGGGCAA+CGG | - | chr4.3:26842149-26842168 | None:intergenic | 30.0% | |
| TAAAGACAGTTTCAACCATT+TGG | - | chr4.3:26840399-26840418 | None:intergenic | 30.0% | |
| TACCTAAAACCAGTAAAATC+AGG | - | chr4.3:26839516-26839535 | None:intergenic | 30.0% | |
| TACTAACAGATCCTATAAAC+TGG | - | chr4.3:26840270-26840289 | None:intergenic | 30.0% | |
| TATATGACCGTATAATTTGG+CGG | + | chr4.3:26840009-26840028 | MS.gene053512:intron | 30.0% | |
| TATTCCGACAAACAATCTTT+CGG | - | chr4.3:26838295-26838314 | None:intergenic | 30.0% | |
| TATTTGATTAAAGGCCAAAG+TGG | + | chr4.3:26842257-26842276 | MS.gene053512:intron | 30.0% | |
| TCATTTGTATTACTGATGTG+AGG | + | chr4.3:26840751-26840770 | MS.gene053512:intron | 30.0% | |
| TGAGATGACACAATTATTTC+TGG | + | chr4.3:26837138-26837157 | MS.gene053512:CDS | 30.0% | |
| TGAGCAGAAAAATATTCCTT+TGG | - | chr4.3:26840132-26840151 | None:intergenic | 30.0% | |
| TGATACTCAGAGATTGATTA+AGG | + | chr4.3:26837632-26837651 | MS.gene053512:CDS | 30.0% | |
| TGCCCATTCTTATTGTTTAT+AGG | + | chr4.3:26842150-26842169 | MS.gene053512:CDS | 30.0% | |
| TGGAAACATTTATCACATAC+AGG | + | chr4.3:26838331-26838350 | MS.gene053512:CDS | 30.0% | |
| TTACTTTCTTCAATGATCAC+AGG | + | chr4.3:26837428-26837447 | MS.gene053512:intron | 30.0% | |
| TTCAGACATATGGAAAGTTA+TGG | + | chr4.3:26841936-26841955 | MS.gene053512:intron | 30.0% | |
| TTCATGGAGATTACGATAAT+TGG | + | chr4.3:26840964-26840983 | MS.gene053512:CDS | 30.0% | |
| TTCTGATAATTACAGGTCAT+TGG | + | chr4.3:26838519-26838538 | MS.gene053512:intron | 30.0% | |
| TTGAACTTGTCAAATGAATC+GGG | + | chr4.3:26840430-26840449 | MS.gene053512:intron | 30.0% | |
| TTGCAATTTGACCCATTAAA+TGG | - | chr4.3:26840702-26840721 | None:intergenic | 30.0% | |
| ! | AATGCGAATACCAAAGTTTT+TGG | + | chr4.3:26839354-26839373 | MS.gene053512:CDS | 30.0% |
| ! | ACAAATCGATTTAATCAGAC+CGG | + | chr4.3:26837249-26837268 | MS.gene053512:CDS | 30.0% |
| ! | AGAGCTCAAGTTTAACTTAT+AGG | - | chr4.3:26841837-26841856 | None:intergenic | 30.0% |
| ! | ATAGTTCCTATTTGTTAGGA+AGG | + | chr4.3:26839018-26839037 | MS.gene053512:intron | 30.0% |
| ! | CTTCTTTTGTAAGTTCAATG+AGG | - | chr4.3:26838370-26838389 | None:intergenic | 30.0% |
| ! | TAGTTCCTATTTGTTAGGAA+GGG | + | chr4.3:26839019-26839038 | MS.gene053512:intron | 30.0% |
| ! | TATTCAAGTCCTGATTTTAC+TGG | + | chr4.3:26839504-26839523 | MS.gene053512:CDS | 30.0% |
| ! | TTTCTTTTCTTTTTGTCTGG+AGG | + | chr4.3:26841133-26841152 | MS.gene053512:intron | 30.0% |
| !! | AAATTAGGACTTGGTTCTTT+TGG | + | chr4.3:26840933-26840952 | MS.gene053512:intron | 30.0% |
| !! | ATATTCCTTTGGAACATCTT+CGG | - | chr4.3:26840121-26840140 | None:intergenic | 30.0% |
| !!! | GCTGTTTTTCTGATAATTAC+AGG | + | chr4.3:26838512-26838531 | MS.gene053512:intron | 30.0% |
| AAATCGTTCTACTGTGGTTT+GGG | + | chr4.3:26841968-26841987 | MS.gene053512:intron | 35.0% | |
| AAGACAGTTTCAACCATTTG+GGG | - | chr4.3:26840397-26840416 | None:intergenic | 35.0% | |
| AATATTGCCGACATCATAGT+TGG | + | chr4.3:26838311-26838330 | MS.gene053512:CDS | 35.0% | |
| AATGTTCATGCCTGACAATA+AGG | - | chr4.3:26839103-26839122 | None:intergenic | 35.0% | |
| AATTCTCAATGTCTCAGACT+TGG | + | chr4.3:26838630-26838649 | MS.gene053512:CDS | 35.0% | |
| ACATGATCAAGACATCAAGT+TGG | - | chr4.3:26841719-26841738 | None:intergenic | 35.0% | |
| ACTATCCCTTCCTAACAAAT+AGG | - | chr4.3:26839027-26839046 | None:intergenic | 35.0% | |
| ACTTAGTTGTTCCACTATTC+AGG | + | chr4.3:26839054-26839073 | MS.gene053512:intron | 35.0% | |
| ACTTCCAAATGTTACATGGA+AGG | - | chr4.3:26839735-26839754 | None:intergenic | 35.0% | |
| AGCACAAAGGAAGAATACAT+TGG | + | chr4.3:26838181-26838200 | MS.gene053512:intron | 35.0% | |
| AGGCATGAACATTTCTTTAG+AGG | + | chr4.3:26839110-26839129 | MS.gene053512:intron | 35.0% | |
| AGTATAACTGTATGAGGACT+TGG | + | chr4.3:26839171-26839190 | MS.gene053512:intron | 35.0% | |
| AGTATCAAATCGTTCTACTG+TGG | + | chr4.3:26841962-26841981 | MS.gene053512:intron | 35.0% | |
| ATAAACTGGTAGAGTGTGAT+GGG | - | chr4.3:26840256-26840275 | None:intergenic | 35.0% | |
| ATATACAGGTATAGCAGTCA+TGG | - | chr4.3:26840633-26840652 | None:intergenic | 35.0% | |
| ATCACACTCTACCAGTTTAT+AGG | + | chr4.3:26840256-26840275 | MS.gene053512:intron | 35.0% | |
| ATCACAGTTTACATGTCTGA+AGG | - | chr4.3:26839433-26839452 | None:intergenic | 35.0% | |
| ATCCATTAGGAATATCAAGC+CGG | - | chr4.3:26841608-26841627 | None:intergenic | 35.0% | |
| ATGGTTGAAGATACAGAAGA+AGG | + | chr4.3:26837786-26837805 | MS.gene053512:CDS | 35.0% | |
| ATTATAAGGGAACCAAGAGA+TGG | + | chr4.3:26840292-26840311 | MS.gene053512:CDS | 35.0% | |
| ATTCAGATCAAGCCATAATG+TGG | - | chr4.3:26839774-26839793 | None:intergenic | 35.0% | |
| CACTAACTAAACCTGAATAG+TGG | - | chr4.3:26839068-26839087 | None:intergenic | 35.0% | |
| CGATTCATTTGACAAGTTCA+AGG | - | chr4.3:26840431-26840450 | None:intergenic | 35.0% | |
| CGGTTTATTAGTGATCAAGA+TGG | - | chr4.3:26842129-26842148 | None:intergenic | 35.0% | |
| CTTATTCTGTGTCCAAAGTT+TGG | + | chr4.3:26839237-26839256 | MS.gene053512:intron | 35.0% | |
| GAAAGAAACTGAAGAAGAAG+AGG | - | chr4.3:26838242-26838261 | None:intergenic | 35.0% | |
| GAACACTTCCAAATGTTACA+TGG | - | chr4.3:26839739-26839758 | None:intergenic | 35.0% | |
| GACACAGAATAAGCGATTAA+TGG | - | chr4.3:26839230-26839249 | None:intergenic | 35.0% | |
| GAGGAGAAATTAGCGTAATT+AGG | + | chr4.3:26838791-26838810 | MS.gene053512:CDS | 35.0% | |
| GAGGTTGTGAAACAATATCA+AGG | + | chr4.3:26840533-26840552 | MS.gene053512:intron | 35.0% | |
| GATAATTACAGGTCATTGGT+TGG | + | chr4.3:26838523-26838542 | MS.gene053512:intron | 35.0% | |
| GCAATCAAATGAACACCAAA+AGG | + | chr4.3:26840478-26840497 | MS.gene053512:intron | 35.0% | |
| GTAGATATAATACCTGGAGA+AGG | - | chr4.3:26837930-26837949 | None:intergenic | 35.0% | |
| GTATCCGAAAGATTGTTTGT+CGG | + | chr4.3:26838288-26838307 | MS.gene053512:CDS | 35.0% | |
| GTCATTGTTTCCTTATTGTC+AGG | + | chr4.3:26839090-26839109 | MS.gene053512:intron | 35.0% | |
| GTGTAATTAGGCATCATCTT+AGG | + | chr4.3:26838853-26838872 | MS.gene053512:intron | 35.0% | |
| TAATTAGGCATCATCTTAGG+AGG | + | chr4.3:26838806-26838825 | MS.gene053512:CDS | 35.0% | |
| TAGTGATCAAGATGGTTTGA+AGG | - | chr4.3:26842121-26842140 | None:intergenic | 35.0% | |
| TATAAACTGGTAGAGTGTGA+TGG | - | chr4.3:26840257-26840276 | None:intergenic | 35.0% | |
| TCAAGAGTTAGAGAATGCAA+AGG | + | chr4.3:26838673-26838692 | MS.gene053512:CDS | 35.0% | |
| TCATAAAGAAGCAGAGGATA+AGG | + | chr4.3:26837210-26837229 | MS.gene053512:CDS | 35.0% | |
| TCGCAACAAACACTTTAGTA+AGG | - | chr4.3:26841402-26841421 | None:intergenic | 35.0% | |
| TCTATGGGAAGCCTATAAAT+TGG | + | chr4.3:26839323-26839342 | MS.gene053512:CDS | 35.0% | |
| TCTTCTTCTTGTTGCAATAC+CGG | - | chr4.3:26837271-26837290 | None:intergenic | 35.0% | |
| TGAACTTGTCAAATGAATCG+GGG | + | chr4.3:26840431-26840450 | MS.gene053512:intron | 35.0% | |
| TGAGATGAGTCCAAAAACTT+TGG | - | chr4.3:26839367-26839386 | None:intergenic | 35.0% | |
| TGGTTATAATACAGATTGCG+AGG | + | chr4.3:26840324-26840343 | MS.gene053512:CDS | 35.0% | |
| TGGTTGAAGATACAGAAGAA+GGG | + | chr4.3:26837787-26837806 | MS.gene053512:CDS | 35.0% | |
| TGTCTTCTGAGCCATTTAAT+GGG | + | chr4.3:26840688-26840707 | MS.gene053512:intron | 35.0% | |
| TTCACACCGTAAAAAAGCAA+GGG | + | chr4.3:26837509-26837528 | MS.gene053512:CDS | 35.0% | |
| TTCAGACATGTAAACTGTGA+TGG | + | chr4.3:26839432-26839451 | MS.gene053512:CDS | 35.0% | |
| TTCTCTAACTCTTGAAGCAT+TGG | - | chr4.3:26838668-26838687 | None:intergenic | 35.0% | |
| TTGTAGACACTTGTAGTTGT+TGG | + | chr4.3:26841759-26841778 | MS.gene053512:intron | 35.0% | |
| TTTCTTTGTCTGTGGATCTT+TGG | + | chr4.3:26839263-26839282 | MS.gene053512:intron | 35.0% | |
| ! | AATCAGGACAAAGTACTTTG+TGG | + | chr4.3:26837474-26837493 | MS.gene053512:CDS | 35.0% |
| ! | ATTTGTTAGGAAGGGATAGT+GGG | + | chr4.3:26839027-26839046 | MS.gene053512:intron | 35.0% |
| ! | CACTATTCAGGTTTAGTTAG+TGG | + | chr4.3:26839066-26839085 | MS.gene053512:intron | 35.0% |
| ! | GAAGCATTAATGCTTTGCTT+TGG | + | chr4.3:26842319-26842338 | MS.gene053512:CDS | 35.0% |
| ! | GCTCAAGTTTAACTTATAGG+AGG | - | chr4.3:26841834-26841853 | None:intergenic | 35.0% |
| ! | GTTTGTTGCGAACATGTAAT+TGG | + | chr4.3:26841411-26841430 | MS.gene053512:intron | 35.0% |
| ! | TATTTGTTAGGAAGGGATAG+TGG | + | chr4.3:26839026-26839045 | MS.gene053512:intron | 35.0% |
| ! | TTTAAAACGGACTTGAGATG+TGG | + | chr4.3:26840182-26840201 | MS.gene053512:intron | 35.0% |
| !! | AATGCTTTGCTTTGGAATTG+AGG | + | chr4.3:26842327-26842346 | MS.gene053512:CDS | 35.0% |
| !! | ATGCTTTGCTTTGGAATTGA+GGG | + | chr4.3:26842328-26842347 | MS.gene053512:CDS | 35.0% |
| !! | TAACATTTGGAAGTGTTCCA+TGG | + | chr4.3:26839741-26839760 | MS.gene053512:intron | 35.0% |
| !!! | GTCCTGATTTTACTGGTTTT+AGG | + | chr4.3:26839511-26839530 | MS.gene053512:CDS | 35.0% |
| ACAAAGAAACCGCCAAACTT+TGG | - | chr4.3:26839252-26839271 | None:intergenic | 40.0% | |
| AGAAGAACATGTCATGAAGG+AGG | + | chr4.3:26838385-26838404 | MS.gene053512:CDS | 40.0% | |
| AGAAGCTCATAAAGAAGCAG+AGG | + | chr4.3:26837204-26837223 | MS.gene053512:CDS | 40.0% | |
| AGACAGTTTCAACCATTTGG+GGG | - | chr4.3:26840396-26840415 | None:intergenic | 40.0% | |
| AGCATTCGTTCCATACAAGA+GGG | - | chr4.3:26841058-26841077 | None:intergenic | 40.0% | |
| ATAAGGCAGCTCAGATTGTA+TGG | + | chr4.3:26838746-26838765 | MS.gene053512:CDS | 40.0% | |
| ATACCGGACAATCATTAGAC+TGG | - | chr4.3:26838042-26838061 | None:intergenic | 40.0% | |
| ATAGACTATCAAGAGAAGGC+AGG | - | chr4.3:26839308-26839327 | None:intergenic | 40.0% | |
| ATTAAAGGCCAAAGTGGGAA+GGG | + | chr4.3:26842263-26842282 | MS.gene053512:intron | 40.0% | |
| ATTCTGTGTCCAAAGTTTGG+CGG | + | chr4.3:26839240-26839259 | MS.gene053512:intron | 40.0% | |
| CAAATCGTTCTACTGTGGTT+TGG | + | chr4.3:26841967-26841986 | MS.gene053512:intron | 40.0% | |
| CAGTTTACATGTCTGAAGGA+AGG | - | chr4.3:26839429-26839448 | None:intergenic | 40.0% | |
| CATAATGTGGATAACCACCA+TGG | - | chr4.3:26839761-26839780 | None:intergenic | 40.0% | |
| CATGGTGGTTATCCACATTA+TGG | + | chr4.3:26839759-26839778 | MS.gene053512:intron | 40.0% | |
| CTGTCCTTCCATGTAACATT+TGG | + | chr4.3:26839728-26839747 | MS.gene053512:intron | 40.0% | |
| CTTCACACCGTAAAAAAGCA+AGG | + | chr4.3:26837508-26837527 | MS.gene053512:CDS | 40.0% | |
| GAGGTTGAAAATCTGTGATG+TGG | - | chr4.3:26842091-26842110 | None:intergenic | 40.0% | |
| GATAACCGAAGATGTTCCAA+AGG | + | chr4.3:26840113-26840132 | MS.gene053512:intron | 40.0% | |
| GATCAACAAACATTGGGACA+TGG | - | chr4.3:26839461-26839480 | None:intergenic | 40.0% | |
| GCAATTGAAGATGCACTCAT+AGG | + | chr4.3:26840358-26840377 | MS.gene053512:CDS | 40.0% | |
| GCAGAGGTAGATATAATACC+TGG | - | chr4.3:26837936-26837955 | None:intergenic | 40.0% | |
| GCGTAATTAGGCATCATCTT+AGG | + | chr4.3:26838803-26838822 | MS.gene053512:CDS | 40.0% | |
| GTGCACTGTTGAAAGACAAT+GGG | + | chr4.3:26841007-26841026 | MS.gene053512:CDS | 40.0% | |
| GTGTCTTCTGAGCCATTTAA+TGG | + | chr4.3:26840687-26840706 | MS.gene053512:intron | 40.0% | |
| TACCCAGTCTAATGATTGTC+CGG | + | chr4.3:26838036-26838055 | MS.gene053512:intron | 40.0% | |
| TACCGGACAATCATTAGACT+GGG | - | chr4.3:26838041-26838060 | None:intergenic | 40.0% | |
| TATCTATGCTGTCGTCAAAC+TGG | - | chr4.3:26838720-26838739 | None:intergenic | 40.0% | |
| TATGGTTGAAGAGGGAAATG+TGG | + | chr4.3:26837758-26837777 | MS.gene053512:CDS | 40.0% | |
| TCAAGATGGTTTGAAGGTCA+CGG | - | chr4.3:26842115-26842134 | None:intergenic | 40.0% | |
| TCACACCGTAAAAAAGCAAG+GGG | + | chr4.3:26837510-26837529 | MS.gene053512:CDS | 40.0% | |
| TCCCATAGACTATCAAGAGA+AGG | - | chr4.3:26839312-26839331 | None:intergenic | 40.0% | |
| TCTTAGGAGGATGGATGATA+TGG | + | chr4.3:26838819-26838838 | MS.gene053512:CDS | 40.0% | |
| TGACTTATTCTGCAGCACAA+AGG | + | chr4.3:26838168-26838187 | MS.gene053512:intron | 40.0% | |
| TGGTGACTACAGTTTGATAC+CGG | - | chr4.3:26838058-26838077 | None:intergenic | 40.0% | |
| TTGTAGATGGAAAGCAGTCT+TGG | - | chr4.3:26840597-26840616 | None:intergenic | 40.0% | |
| ! | CAGTGTTGGGATTCCATATA+AGG | + | chr4.3:26839656-26839675 | MS.gene053512:intron | 40.0% |
| ! | GAGTTTGAGCTTTTGCCTTT+TGG | - | chr4.3:26840496-26840515 | None:intergenic | 40.0% |
| ! | GCCTTCTCTTGATAGTCTAT+GGG | + | chr4.3:26839308-26839327 | MS.gene053512:CDS | 40.0% |
| ! | GTAGCTGCGACTTTTCTAAT+TGG | + | chr4.3:26841630-26841649 | MS.gene053512:intron | 40.0% |
| ! | TGCCTTCTCTTGATAGTCTA+TGG | + | chr4.3:26839307-26839326 | MS.gene053512:CDS | 40.0% |
| !! | CATCAAGTTGGTAGACCAAA+TGG | - | chr4.3:26841707-26841726 | None:intergenic | 40.0% |
| !! | TACAGGTCATTGGTTGGTAA+AGG | + | chr4.3:26838529-26838548 | MS.gene053512:intron | 40.0% |
| !! | TCTTTTGGCTGCAGATTTCA+TGG | + | chr4.3:26840948-26840967 | MS.gene053512:intron | 40.0% |
| !!! | ATTGCCCCCTTGCTTTTTTA+CGG | - | chr4.3:26837518-26837537 | None:intergenic | 40.0% |
| !!! | TGCTTTTTTACGGTGTGAAG+CGG | - | chr4.3:26837508-26837527 | None:intergenic | 40.0% |
| AAAAGCAAGGGGGCAATACA+AGG | + | chr4.3:26837521-26837540 | MS.gene053512:CDS | 45.0% | |
| AAACCAGTTAGCCACAGCAA+AGG | + | chr4.3:26839387-26839406 | MS.gene053512:CDS | 45.0% | |
| AACATACCTAATCTGACCGC+TGG | - | chr4.3:26838447-26838466 | None:intergenic | 45.0% | |
| AAGATACAGAAGAAGGGCGA+TGG | + | chr4.3:26837793-26837812 | MS.gene053512:CDS | 45.0% | |
| AAGATGGTTTGAAGGTCACG+GGG | - | chr4.3:26842113-26842132 | None:intergenic | 45.0% | |
| AGAGGGAAATGTGGAACAGA+TGG | + | chr4.3:26837767-26837786 | MS.gene053512:CDS | 45.0% | |
| AGCTCAAACTCCTTATCACC+TGG | + | chr4.3:26840505-26840524 | MS.gene053512:intron | 45.0% | |
| AGGATGGATGCTTGTTTCCA+TGG | + | chr4.3:26838876-26838895 | MS.gene053512:intron | 45.0% | |
| AGTTAACCTGAGCAAGTGGA+TGG | - | chr4.3:26839710-26839729 | None:intergenic | 45.0% | |
| AGTTACGTTTCCTGCAACCA+TGG | + | chr4.3:26839563-26839582 | MS.gene053512:intron | 45.0% | |
| ATCAGTAATGCCGTGTCAAG+AGG | + | chr4.3:26838419-26838438 | MS.gene053512:CDS | 45.0% | |
| ATGACGACGATGAGAACACA+CGG | + | chr4.3:26842293-26842312 | MS.gene053512:CDS | 45.0% | |
| ATGGAAAGAGCTGATGAAGG+AGG | + | chr4.3:26837812-26837831 | MS.gene053512:CDS | 45.0% | |
| CAAGATGGTTTGAAGGTCAC+GGG | - | chr4.3:26842114-26842133 | None:intergenic | 45.0% | |
| CACACCGTAAAAAAGCAAGG+GGG | + | chr4.3:26837511-26837530 | MS.gene053512:CDS | 45.0% | |
| CACAGTTCAACAATCTGTCG+TGG | + | chr4.3:26841998-26842017 | MS.gene053512:intron | 45.0% | |
| CAGCATTCGTTCCATACAAG+AGG | - | chr4.3:26841059-26841078 | None:intergenic | 45.0% | |
| CATTCTCAGTGACATGGTTC+AGG | + | chr4.3:26842025-26842044 | MS.gene053512:CDS | 45.0% | |
| GAATAAAACGCCATGGTTGC+AGG | - | chr4.3:26839576-26839595 | None:intergenic | 45.0% | |
| GATTAAAGGCCAAAGTGGGA+AGG | + | chr4.3:26842262-26842281 | MS.gene053512:intron | 45.0% | |
| GGTCTGTTGCTCACATACTA+TGG | + | chr4.3:26840985-26841004 | MS.gene053512:CDS | 45.0% | |
| GGTGCACTGTTGAAAGACAA+TGG | + | chr4.3:26841006-26841025 | MS.gene053512:CDS | 45.0% | |
| TAGGAGGATGGATGATATGG+AGG | + | chr4.3:26838822-26838841 | MS.gene053512:CDS | 45.0% | |
| TAGGCATCATCTTAGGAGGA+TGG | + | chr4.3:26838810-26838829 | MS.gene053512:CDS | 45.0% | |
| TATAAACCCCCTTCCCACTT+TGG | - | chr4.3:26842274-26842293 | None:intergenic | 45.0% | |
| TGGCGGTATGTATCTGTCAT+GGG | + | chr4.3:26840026-26840045 | MS.gene053512:intron | 45.0% | |
| TGGTACCTGCAAATCGTTAC+CGG | - | chr4.3:26839210-26839229 | None:intergenic | 45.0% | |
| TTAAAGGCCAAAGTGGGAAG+GGG | + | chr4.3:26842264-26842283 | MS.gene053512:intron | 45.0% | |
| TTGGCAAGAAATCCAATCCC+TGG | + | chr4.3:26839282-26839301 | MS.gene053512:intron | 45.0% | |
| TTGGCGGTATGTATCTGTCA+TGG | + | chr4.3:26840025-26840044 | MS.gene053512:intron | 45.0% | |
| TTTGGCGGTTTCTTTGTCTG+TGG | + | chr4.3:26839255-26839274 | MS.gene053512:intron | 45.0% | |
| ! | CTCTTTTGTCCCAGATTTGC+TGG | + | chr4.3:26840822-26840841 | MS.gene053512:intron | 45.0% |
| !! | CATTTGGAAGTGTTCCATGG+TGG | + | chr4.3:26839744-26839763 | MS.gene053512:intron | 45.0% |
| !! | GGTTGGTAAAGGTTGCATAG+AGG | + | chr4.3:26838540-26838559 | MS.gene053512:CDS | 45.0% |
| !! | ATGTTAAATTAATATATTTA+CGG | + | chr4.3:26837959-26837978 | MS.gene053512:intron | 5.0% |
| ACCTCTTTGGCCAGGTGATA+AGG | - | chr4.3:26840518-26840537 | None:intergenic | 50.0% | |
| AGGAATATCAAGCCGGCGTT+TGG | - | chr4.3:26841601-26841620 | None:intergenic | 50.0% | |
| ATTCCCCACTCCAGCAAATC+TGG | - | chr4.3:26840835-26840854 | None:intergenic | 50.0% | |
| CAGTGACATGGTTCAGGCAA+AGG | + | chr4.3:26842031-26842050 | MS.gene053512:CDS | 50.0% | |
| CCAACATGCTTGCCATCTCT+TGG | - | chr4.3:26840307-26840326 | None:intergenic | 50.0% | |
| CCAAGAGATGGCAAGCATGT+TGG | + | chr4.3:26840304-26840323 | MS.gene053512:CDS | 50.0% | |
| CTACAGAAACAGCCTTCTCC+AGG | + | chr4.3:26837915-26837934 | MS.gene053512:CDS | 50.0% | |
| GAACATGTCATGAAGGAGGC+TGG | + | chr4.3:26838389-26838408 | MS.gene053512:CDS | 50.0% | |
| GCAATATAGGGCCTTTGCTG+TGG | - | chr4.3:26839401-26839420 | None:intergenic | 50.0% | |
| GCGATGGAAAGAGCTGATGA+AGG | + | chr4.3:26837809-26837828 | MS.gene053512:CDS | 50.0% | |
| GGACAGTTAACCTGAGCAAG+TGG | - | chr4.3:26839714-26839733 | None:intergenic | 50.0% | |
| GGAGCTCATTCTCAGTGACA+TGG | + | chr4.3:26842019-26842038 | MS.gene053512:CDS | 50.0% | |
| GTCGCAGCTACAGATCCATT+AGG | - | chr4.3:26841621-26841640 | None:intergenic | 50.0% | |
| GTTTCACAACCTCTTTGGCC+AGG | - | chr4.3:26840526-26840545 | None:intergenic | 50.0% | |
| TAAAGGCCAAAGTGGGAAGG+GGG | + | chr4.3:26842265-26842284 | MS.gene053512:intron | 50.0% | |
| TATCAAGAGAAGGCAGGCCA+GGG | - | chr4.3:26839302-26839321 | None:intergenic | 50.0% | |
| TCCTTATCACCTGGCCAAAG+AGG | + | chr4.3:26840514-26840533 | MS.gene053512:intron | 50.0% | |
| TGAAGTCCATCCACTTGCTC+AGG | + | chr4.3:26839701-26839720 | MS.gene053512:CDS | 50.0% | |
| TGCTAAGCTCTTCCAAACGC+CGG | + | chr4.3:26841586-26841605 | MS.gene053512:intron | 50.0% | |
| TTCCCCACTCCAGCAAATCT+GGG | - | chr4.3:26840834-26840853 | None:intergenic | 50.0% | |
| ! | ACTTGGTGATATGCCTGCAC+CGG | + | chr4.3:26839188-26839207 | MS.gene053512:intron | 50.0% |
| ! | ATGGTTCAGGCAAAGGCACA+GGG | + | chr4.3:26842038-26842057 | MS.gene053512:CDS | 50.0% |
| ! | GTGCTGATGTAGTGGAGGTT+AGG | + | chr4.3:26842060-26842079 | MS.gene053512:CDS | 50.0% |
| !! | CGCCGGCTTGATATTCCTAA+TGG | + | chr4.3:26841603-26841622 | MS.gene053512:intron | 50.0% |
| !! | TGTCCCAGATTTGCTGGAGT+GGG | + | chr4.3:26840828-26840847 | MS.gene053512:intron | 50.0% |
| !! | TTGTCCCAGATTTGCTGGAG+TGG | + | chr4.3:26840827-26840846 | MS.gene053512:intron | 50.0% |
| ACCGCTGGATCCTCTTGACA+CGG | - | chr4.3:26838432-26838451 | None:intergenic | 55.0% | |
| ATGGTTTGAAGGTCACGGGG+AGG | - | chr4.3:26842110-26842129 | None:intergenic | 55.0% | |
| CGACGATGAGAACACACGGT+TGG | + | chr4.3:26842297-26842316 | MS.gene053512:CDS | 55.0% | |
| CTATCAAGAGAAGGCAGGCC+AGG | - | chr4.3:26839303-26839322 | None:intergenic | 55.0% | |
| CTCTGCATGAGCAGCGTCTT+GGG | - | chr4.3:26837574-26837593 | None:intergenic | 55.0% | |
| CTGCAAATCGTTACCGGTGC+AGG | - | chr4.3:26839204-26839223 | None:intergenic | 55.0% | |
| GAGGATCCAGCGGTCAGATT+AGG | + | chr4.3:26838438-26838457 | MS.gene053512:CDS | 55.0% | |
| TCTCTGCATGAGCAGCGTCT+TGG | - | chr4.3:26837575-26837594 | None:intergenic | 55.0% | |
| ! | CATGGTTCAGGCAAAGGCAC+AGG | + | chr4.3:26842037-26842056 | MS.gene053512:CDS | 55.0% |
| ! | CTGCACCGGTAACGATTTGC+AGG | + | chr4.3:26839202-26839221 | MS.gene053512:intron | 55.0% |
| !! | ACAGGGTGCTGATGTAGTGG+AGG | + | chr4.3:26842055-26842074 | MS.gene053512:CDS | 55.0% |
| !! | GTCCCAGATTTGCTGGAGTG+GGG | + | chr4.3:26840829-26840848 | MS.gene053512:intron | 55.0% |
| AGAGAAGGCAGGCCAGGGAT+TGG | - | chr4.3:26839297-26839316 | None:intergenic | 60.0% | |
| GCCGTGTCAAGAGGATCCAG+CGG | + | chr4.3:26838428-26838447 | MS.gene053512:CDS | 60.0% | |
| ! | GGGCCTTTGCTGTGGCTAAC+TGG | - | chr4.3:26839393-26839412 | None:intergenic | 60.0% |
| !! | GGCACAGGGTGCTGATGTAG+TGG | + | chr4.3:26842052-26842071 | MS.gene053512:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.3 | gene | 26837085 | 26842354 | 26837085 | ID=MS.gene053512 |
| chr4.3 | mRNA | 26837085 | 26842354 | 26837085 | ID=MS.gene053512.t1;Parent=MS.gene053512 |
| chr4.3 | exon | 26837085 | 26837363 | 26837085 | ID=MS.gene053512.t1.exon1;Parent=MS.gene053512.t1 |
| chr4.3 | CDS | 26837085 | 26837363 | 26837085 | ID=cds.MS.gene053512.t1;Parent=MS.gene053512.t1 |
| chr4.3 | exon | 26837450 | 26837936 | 26837450 | ID=MS.gene053512.t1.exon2;Parent=MS.gene053512.t1 |
| chr4.3 | CDS | 26837450 | 26837936 | 26837450 | ID=cds.MS.gene053512.t1;Parent=MS.gene053512.t1 |
| chr4.3 | exon | 26838183 | 26838459 | 26838183 | ID=MS.gene053512.t1.exon3;Parent=MS.gene053512.t1 |
| chr4.3 | CDS | 26838183 | 26838459 | 26838183 | ID=cds.MS.gene053512.t1;Parent=MS.gene053512.t1 |
| chr4.3 | exon | 26838534 | 26838854 | 26838534 | ID=MS.gene053512.t1.exon4;Parent=MS.gene053512.t1 |
| chr4.3 | CDS | 26838534 | 26838854 | 26838534 | ID=cds.MS.gene053512.t1;Parent=MS.gene053512.t1 |
| chr4.3 | exon | 26839290 | 26839532 | 26839290 | ID=MS.gene053512.t1.exon5;Parent=MS.gene053512.t1 |
| chr4.3 | CDS | 26839290 | 26839532 | 26839290 | ID=cds.MS.gene053512.t1;Parent=MS.gene053512.t1 |
| chr4.3 | exon | 26839659 | 26839722 | 26839659 | ID=MS.gene053512.t1.exon6;Parent=MS.gene053512.t1 |
| chr4.3 | CDS | 26839659 | 26839722 | 26839659 | ID=cds.MS.gene053512.t1;Parent=MS.gene053512.t1 |
| chr4.3 | exon | 26840271 | 26840379 | 26840271 | ID=MS.gene053512.t1.exon7;Parent=MS.gene053512.t1 |
| chr4.3 | CDS | 26840271 | 26840379 | 26840271 | ID=cds.MS.gene053512.t1;Parent=MS.gene053512.t1 |
| chr4.3 | exon | 26840962 | 26841042 | 26840962 | ID=MS.gene053512.t1.exon8;Parent=MS.gene053512.t1 |
| chr4.3 | CDS | 26840962 | 26841042 | 26840962 | ID=cds.MS.gene053512.t1;Parent=MS.gene053512.t1 |
| chr4.3 | exon | 26842003 | 26842171 | 26842003 | ID=MS.gene053512.t1.exon9;Parent=MS.gene053512.t1 |
| chr4.3 | CDS | 26842003 | 26842171 | 26842003 | ID=cds.MS.gene053512.t1;Parent=MS.gene053512.t1 |
| chr4.3 | exon | 26842270 | 26842354 | 26842270 | ID=MS.gene053512.t1.exon10;Parent=MS.gene053512.t1 |
| chr4.3 | CDS | 26842270 | 26842354 | 26842270 | ID=cds.MS.gene053512.t1;Parent=MS.gene053512.t1 |
| Gene Sequence |
| Protein sequence |
