Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene76773.t1 | XP_013463754.1 | 98.8 | 160 | 2 | 0 | 1 | 160 | 1 | 160 | 1.10E-32 | 149.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene76773.t1 | P94077 | 65.1 | 172 | 47 | 3 | 1 | 160 | 6 | 176 | 7.7e-08 | 58.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene76773.t1 | A0A072V6U7 | 98.8 | 160 | 2 | 0 | 1 | 160 | 1 | 160 | 7.6e-33 | 149.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene76773.t1 | TF | C2C2-LSD |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049134 | MS.gene76773 | 0.802293 | 6.01E-49 | -1.69E-46 |
| MS.gene049195 | MS.gene76773 | -0.813537 | 2.43E-51 | -1.69E-46 |
| MS.gene049260 | MS.gene76773 | -0.809793 | 1.59E-50 | -1.69E-46 |
| MS.gene049435 | MS.gene76773 | -0.822098 | 2.84E-53 | -1.69E-46 |
| MS.gene050227 | MS.gene76773 | -0.815251 | 1.02E-51 | -1.69E-46 |
| MS.gene050228 | MS.gene76773 | -0.803385 | 3.57E-49 | -1.69E-46 |
| MS.gene050442 | MS.gene76773 | -0.845038 | 5.21E-59 | -1.69E-46 |
| MS.gene050623 | MS.gene76773 | 0.804178 | 2.45E-49 | -1.69E-46 |
| MS.gene050680 | MS.gene76773 | -0.805927 | 1.05E-49 | -1.69E-46 |
| MS.gene050750 | MS.gene76773 | -0.852388 | 4.77E-61 | -1.69E-46 |
| MS.gene050787 | MS.gene76773 | -0.86187 | 7.57E-64 | -1.69E-46 |
| MS.gene050820 | MS.gene76773 | -0.810762 | 9.81E-51 | -1.69E-46 |
| MS.gene050953 | MS.gene76773 | -0.835169 | 1.96E-56 | -1.69E-46 |
| MS.gene051265 | MS.gene76773 | -0.819953 | 8.86E-53 | -1.69E-46 |
| MS.gene051568 | MS.gene76773 | -0.821613 | 3.68E-53 | -1.69E-46 |
| MS.gene051860 | MS.gene76773 | -0.836243 | 1.05E-56 | -1.69E-46 |
| MS.gene051983 | MS.gene76773 | -0.816274 | 6.02E-52 | -1.69E-46 |
| MS.gene052190 | MS.gene76773 | -0.838873 | 2.22E-57 | -1.69E-46 |
| MS.gene052333 | MS.gene76773 | -0.828198 | 1.03E-54 | -1.69E-46 |
| MS.gene052361 | MS.gene76773 | 0.803843 | 2.87E-49 | -1.69E-46 |
| MS.gene052867 | MS.gene76773 | -0.801505 | 8.72E-49 | -1.69E-46 |
| MS.gene053054 | MS.gene76773 | 0.824811 | 6.59E-54 | -1.69E-46 |
| MS.gene053166 | MS.gene76773 | -0.83371 | 4.56E-56 | -1.69E-46 |
| MS.gene053584 | MS.gene76773 | -0.804516 | 2.08E-49 | -1.69E-46 |
| MS.gene053836 | MS.gene76773 | -0.811177 | 7.98E-51 | -1.69E-46 |
| MS.gene05415 | MS.gene76773 | -0.810483 | 1.13E-50 | -1.69E-46 |
| MS.gene054183 | MS.gene76773 | -0.838547 | 2.70E-57 | -1.69E-46 |
| MS.gene054291 | MS.gene76773 | 0.856875 | 2.39E-62 | -1.69E-46 |
| MS.gene054405 | MS.gene76773 | -0.833122 | 6.39E-56 | -1.69E-46 |
| MS.gene054433 | MS.gene76773 | -0.804782 | 1.83E-49 | -1.69E-46 |
| MS.gene054467 | MS.gene76773 | -0.803841 | 2.88E-49 | -1.69E-46 |
| MS.gene054468 | MS.gene76773 | -0.834355 | 3.14E-56 | -1.69E-46 |
| MS.gene054559 | MS.gene76773 | -0.856225 | 3.71E-62 | -1.69E-46 |
| MS.gene054942 | MS.gene76773 | -0.805206 | 1.49E-49 | -1.69E-46 |
| MS.gene055356 | MS.gene76773 | -0.863973 | 1.70E-64 | -1.69E-46 |
| MS.gene055357 | MS.gene76773 | -0.817113 | 3.90E-52 | -1.69E-46 |
| MS.gene055358 | MS.gene76773 | -0.865041 | 7.87E-65 | -1.69E-46 |
| MS.gene055367 | MS.gene76773 | -0.816366 | 5.74E-52 | -1.69E-46 |
| MS.gene055701 | MS.gene76773 | -0.82418 | 9.28E-54 | -1.69E-46 |
| MS.gene055818 | MS.gene76773 | -0.806716 | 7.19E-50 | -1.69E-46 |
| MS.gene056506 | MS.gene76773 | -0.800312 | 1.53E-48 | -1.69E-46 |
| MS.gene056723 | MS.gene76773 | -0.808556 | 2.92E-50 | -1.69E-46 |
| MS.gene056979 | MS.gene76773 | -0.803353 | 3.63E-49 | -1.69E-46 |
| MS.gene057156 | MS.gene76773 | 0.809894 | 1.51E-50 | -1.69E-46 |
| MS.gene057200 | MS.gene76773 | -0.813894 | 2.03E-51 | -1.69E-46 |
| MS.gene057244 | MS.gene76773 | 0.824956 | 6.09E-54 | -1.69E-46 |
| MS.gene057414 | MS.gene76773 | -0.809979 | 1.45E-50 | -1.69E-46 |
| MS.gene057469 | MS.gene76773 | -0.83208 | 1.16E-55 | -1.69E-46 |
| MS.gene057639 | MS.gene76773 | -0.813035 | 3.14E-51 | -1.69E-46 |
| MS.gene058142 | MS.gene76773 | -0.800622 | 1.32E-48 | -1.69E-46 |
| MS.gene059161 | MS.gene76773 | -0.817028 | 4.08E-52 | -1.69E-46 |
| MS.gene059609 | MS.gene76773 | -0.823966 | 1.04E-53 | -1.69E-46 |
| MS.gene059849 | MS.gene76773 | 0.82415 | 9.44E-54 | -1.69E-46 |
| MS.gene059896 | MS.gene76773 | 0.802337 | 5.89E-49 | -1.69E-46 |
| MS.gene060011 | MS.gene76773 | -0.807653 | 4.55E-50 | -1.69E-46 |
| MS.gene060137 | MS.gene76773 | 0.903713 | 2.61E-79 | -1.69E-46 |
| MS.gene060322 | MS.gene76773 | -0.810733 | 9.95E-51 | -1.69E-46 |
| MS.gene060634 | MS.gene76773 | 0.827899 | 1.21E-54 | -1.69E-46 |
| MS.gene060802 | MS.gene76773 | -0.817738 | 2.82E-52 | -1.69E-46 |
| MS.gene060803 | MS.gene76773 | -0.814799 | 1.28E-51 | -1.69E-46 |
| MS.gene061040 | MS.gene76773 | 0.837946 | 3.85E-57 | -1.69E-46 |
| MS.gene061114 | MS.gene76773 | 0.897989 | 8.23E-77 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene76773.t1 | MTR_2g047838 | 98.750 | 160 | 2 | 0 | 1 | 160 | 1 | 160 | 4.92e-114 | 320 |
| MS.gene76773.t1 | MTR_8g089310 | 70.482 | 166 | 40 | 2 | 1 | 160 | 1 | 163 | 1.93e-78 | 231 |
| MS.gene76773.t1 | MTR_8g089310 | 70.482 | 166 | 40 | 2 | 1 | 160 | 14 | 176 | 2.07e-78 | 231 |
| MS.gene76773.t1 | MTR_8g089310 | 70.482 | 166 | 40 | 2 | 1 | 160 | 48 | 210 | 4.97e-78 | 231 |
| MS.gene76773.t1 | MTR_4g098500 | 60.526 | 114 | 42 | 2 | 2 | 115 | 5 | 115 | 6.14e-47 | 149 |
| MS.gene76773.t1 | MTR_4g098500 | 58.621 | 116 | 45 | 1 | 2 | 117 | 31 | 143 | 2.72e-46 | 148 |
| MS.gene76773.t1 | MTR_4g088850 | 43.182 | 88 | 50 | 0 | 44 | 131 | 40 | 127 | 1.73e-24 | 92.4 |
| MS.gene76773.t1 | MTR_4g088850 | 44.737 | 76 | 42 | 0 | 44 | 119 | 40 | 115 | 7.38e-22 | 86.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene76773.t1 | AT4G20380 | 59.302 | 172 | 57 | 4 | 1 | 160 | 6 | 176 | 4.02e-55 | 172 |
| MS.gene76773.t1 | AT4G20380 | 59.302 | 172 | 57 | 4 | 1 | 160 | 6 | 176 | 4.02e-55 | 172 |
| MS.gene76773.t1 | AT4G20380 | 59.302 | 172 | 57 | 4 | 1 | 160 | 1 | 171 | 6.21e-55 | 171 |
| MS.gene76773.t1 | AT4G20380 | 59.302 | 172 | 57 | 4 | 1 | 160 | 1 | 171 | 6.21e-55 | 171 |
| MS.gene76773.t1 | AT4G20380 | 59.302 | 172 | 57 | 4 | 1 | 160 | 1 | 171 | 6.21e-55 | 171 |
| MS.gene76773.t1 | AT4G20380 | 59.302 | 172 | 57 | 4 | 1 | 160 | 1 | 171 | 6.21e-55 | 171 |
| MS.gene76773.t1 | AT4G20380 | 59.302 | 172 | 57 | 4 | 1 | 160 | 1 | 171 | 6.21e-55 | 171 |
| MS.gene76773.t1 | AT4G20380 | 51.515 | 198 | 57 | 4 | 1 | 160 | 1 | 197 | 1.75e-51 | 163 |
| MS.gene76773.t1 | AT1G32540 | 60.177 | 113 | 42 | 2 | 2 | 114 | 65 | 174 | 1.27e-45 | 148 |
| MS.gene76773.t1 | AT1G32540 | 58.772 | 114 | 44 | 1 | 2 | 115 | 32 | 142 | 3.99e-45 | 145 |
| MS.gene76773.t1 | AT1G32540 | 58.772 | 114 | 44 | 1 | 2 | 115 | 32 | 142 | 3.99e-45 | 145 |
| MS.gene76773.t1 | AT1G32540 | 59.459 | 111 | 42 | 1 | 2 | 112 | 32 | 139 | 2.52e-44 | 144 |
| MS.gene76773.t1 | AT4G20380 | 58.400 | 125 | 42 | 3 | 1 | 116 | 1 | 124 | 6.33e-42 | 136 |
| MS.gene76773.t1 | AT1G32540 | 61.039 | 77 | 27 | 2 | 2 | 78 | 65 | 138 | 1.10e-27 | 100 |
| MS.gene76773.t1 | AT1G32540 | 51.515 | 66 | 31 | 1 | 45 | 109 | 66 | 131 | 3.51e-14 | 66.2 |
| MS.gene76773.t1 | AT1G32540 | 59.740 | 77 | 28 | 1 | 2 | 78 | 32 | 105 | 3.68e-27 | 98.6 |
| MS.gene76773.t1 | AT1G32540 | 50.000 | 68 | 33 | 1 | 45 | 111 | 33 | 100 | 1.75e-14 | 65.9 |
| MS.gene76773.t1 | AT1G32540 | 59.740 | 77 | 28 | 1 | 2 | 78 | 32 | 105 | 3.68e-27 | 98.6 |
| MS.gene76773.t1 | AT1G32540 | 50.000 | 68 | 33 | 1 | 45 | 111 | 33 | 100 | 1.75e-14 | 65.9 |
| MS.gene76773.t1 | AT4G21610 | 47.500 | 80 | 42 | 0 | 43 | 122 | 57 | 136 | 1.71e-24 | 93.2 |
| MS.gene76773.t1 | AT4G21610 | 33.750 | 80 | 49 | 1 | 2 | 81 | 58 | 133 | 6.13e-11 | 57.8 |
| MS.gene76773.t1 | AT4G21610 | 45.946 | 74 | 40 | 0 | 43 | 116 | 57 | 130 | 6.17e-21 | 83.6 |
Find 44 sgRNAs with CRISPR-Local
Find 340 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CGTTGATTCAAGTGGGAAAT+TGG | 0.251370 | 2.4:-43402431 | None:intergenic |
| TCGGAGCTGGTTGTTTCATT+AGG | 0.307392 | 2.4:+43402629 | None:intergenic |
| GGAGGAAGAACAGGAATAAC+AGG | 0.354231 | 2.4:+43406754 | None:intergenic |
| GGCAGTTCCCACAACGGATA+TGG | 0.376956 | 2.4:+43403411 | None:intergenic |
| GTTATTCCTGTTCTTCCTCC+TGG | 0.387766 | 2.4:-43406751 | MS.gene76773:intron |
| CGGAGCCACATTATGTGTAC+TGG | 0.429482 | 2.4:-43406847 | MS.gene76773:CDS |
| AAGATACCAGGAGGAAGAAC+AGG | 0.433787 | 2.4:+43406745 | None:intergenic |
| AGAAGATACCGTTTCGGAGC+TGG | 0.444161 | 2.4:+43402616 | None:intergenic |
| CAAACATTGCTTGCTCCTCT+AGG | 0.449369 | 2.4:+43406802 | None:intergenic |
| CCACTTGAATCAACGGACAT+AGG | 0.456065 | 2.4:+43402439 | None:intergenic |
| AGGAGTTGGCGGCCTTCCAT+TGG | 0.478744 | 2.4:+43402661 | None:intergenic |
| ATATCCGTTGTGGGAACTGC+CGG | 0.504182 | 2.4:-43403409 | MS.gene76773:CDS |
| TGCAGTAGAAGATACCGTTT+CGG | 0.505298 | 2.4:+43402610 | None:intergenic |
| AAATGAACCATATCCGTTGT+GGG | 0.521367 | 2.4:-43403418 | MS.gene76773:CDS |
| GTTTCATTAGGTGTCAGTAC+AGG | 0.522934 | 2.4:+43402641 | None:intergenic |
| CAATTTCCCACTTGAATCAA+CGG | 0.526156 | 2.4:+43402432 | None:intergenic |
| TTGCTCCTCTAGGGTAAAGC+AGG | 0.536954 | 2.4:+43406812 | None:intergenic |
| GAGGATACATGAGTGTTGTC+CGG | 0.538194 | 2.4:+43403390 | None:intergenic |
| AAACATTGCTTGCTCCTCTA+GGG | 0.540478 | 2.4:+43406803 | None:intergenic |
| GAAATGTCACAACTTTATTG+TGG | 0.542581 | 2.4:-43405687 | MS.gene76773:CDS |
| CAAATGAACCATATCCGTTG+TGG | 0.547355 | 2.4:-43403419 | MS.gene76773:CDS |
| TGAAACAACCAGCTCCGAAA+CGG | 0.550490 | 2.4:-43402624 | MS.gene76773:intron |
| AAGATTTATAGTGTTACAGC+AGG | 0.559794 | 2.4:+43405611 | None:intergenic |
| AACACTATAAATCTTGTGCC+AGG | 0.563885 | 2.4:-43405603 | MS.gene76773:intron |
| TTAGGTGTCAGTACAGGAGT+TGG | 0.564205 | 2.4:+43402647 | None:intergenic |
| GGTGTCAGTACAGGAGTTGG+CGG | 0.576256 | 2.4:+43402650 | None:intergenic |
| ACAACACTCATGTATCCTCA+TGG | 0.578970 | 2.4:-43403386 | MS.gene76773:CDS |
| ATGTCACAACTTTATTGTGG+AGG | 0.583864 | 2.4:-43405684 | MS.gene76773:CDS |
| ACATTATGTGTACTGGGTGT+AGG | 0.596546 | 2.4:-43406840 | MS.gene76773:CDS |
| TCCTGTAGATGACCAATGGA+AGG | 0.615310 | 2.4:-43402673 | MS.gene76773:intron |
| CCTATGTCCGTTGATTCAAG+TGG | 0.615696 | 2.4:-43402439 | MS.gene76773:CDS |
| AACATCCTGCTTTACCCTAG+AGG | 0.636037 | 2.4:-43406817 | MS.gene76773:CDS |
| CTATGTCCGTTGATTCAAGT+GGG | 0.636368 | 2.4:-43402438 | MS.gene76773:CDS |
| CAAACTGCACATTTGACTGA+AGG | 0.636685 | 2.4:+43403359 | None:intergenic |
| TACACCCAGTACACATAATG+TGG | 0.639256 | 2.4:+43406842 | None:intergenic |
| ATTGTCCTGTAGATGACCAA+TGG | 0.647818 | 2.4:-43402677 | MS.gene76773:intron |
| ACAGTTTGGCTCTCAAAGTG+AGG | 0.651282 | 2.4:+43402475 | None:intergenic |
| GGAGCCACATTATGTGTACT+GGG | 0.663903 | 2.4:-43406846 | MS.gene76773:CDS |
| GAGGAAGAACAGGAATAACA+GGG | 0.675525 | 2.4:+43406755 | None:intergenic |
| ACATTGCTAATGCACGCACG+TGG | 0.683036 | 2.4:-43405654 | MS.gene76773:CDS |
| TTGTCCGGCAGTTCCCACAA+CGG | 0.690082 | 2.4:+43403405 | None:intergenic |
| GTTACAGCAGGAACATCTCA+CGG | 0.690666 | 2.4:+43405623 | None:intergenic |
| TTGACTGAAGGAGCTCCATG+AGG | 0.723404 | 2.4:+43403371 | None:intergenic |
| AGGAAGAACAGGAATAACAG+GGG | 0.773701 | 2.4:+43406756 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAAAAACAACAATTAAATT+TGG | - | chr2.4:43402836-43402855 | MS.gene76773:intron | 10.0% |
| !! | GTTAAAAAAAAAAAAATCAA+AGG | + | chr2.4:43402674-43402693 | None:intergenic | 10.0% |
| !! | TAAAAACAACAATTAAATTT+GGG | - | chr2.4:43402837-43402856 | MS.gene76773:intron | 10.0% |
| !! | TTATTTATACATTAAAAGAA+TGG | - | chr2.4:43402806-43402825 | MS.gene76773:intron | 10.0% |
| !! | AAAAAAAAAAAATCAAAGGA+AGG | + | chr2.4:43402670-43402689 | None:intergenic | 15.0% |
| !! | ATTATAATTATATATCACCA+AGG | - | chr2.4:43404304-43404323 | MS.gene76773:intron | 15.0% |
| !! | GATTTAAACTATAAACTAAA+TGG | - | chr2.4:43403528-43403547 | MS.gene76773:intron | 15.0% |
| !! | TTCAAAATAATATCAAATTG+TGG | + | chr2.4:43404957-43404976 | None:intergenic | 15.0% |
| !!! | ATTTAATTGTTGTTTTTATG+AGG | + | chr2.4:43402835-43402854 | None:intergenic | 15.0% |
| !!! | TTTAAAACTAATCTGAATTT+CGG | + | chr2.4:43405577-43405596 | None:intergenic | 15.0% |
| !!! | TTTAATTGTTGTTTTTATGA+GGG | + | chr2.4:43402834-43402853 | None:intergenic | 15.0% |
| !! | AATAATATTTCCCACTAAAT+TGG | + | chr2.4:43402791-43402810 | None:intergenic | 20.0% |
| !! | ATAATATTTCCCACTAAATT+GGG | + | chr2.4:43402790-43402809 | None:intergenic | 20.0% |
| !! | ATATTTAAGAAAAGAAAGAC+AGG | - | chr2.4:43406302-43406321 | MS.gene76773:intron | 20.0% |
| !! | ATTTAGCCAATTATTAACAA+GGG | - | chr2.4:43403437-43403456 | MS.gene76773:intron | 20.0% |
| !! | CATTTGATTAGAATCTTTAA+AGG | + | chr2.4:43405849-43405868 | None:intergenic | 20.0% |
| !! | GTTGAAAATCAGAAAATAAT+TGG | - | chr2.4:43406198-43406217 | MS.gene76773:intron | 20.0% |
| !! | TATAAAAGCTTGATATAGAT+GGG | - | chr2.4:43406340-43406359 | MS.gene76773:intron | 20.0% |
| !! | TATAAATTAAGTGTATACCA+GGG | + | chr2.4:43403831-43403850 | None:intergenic | 20.0% |
| !! | TATCAAAATAGAATCTTGAT+TGG | + | chr2.4:43406091-43406110 | None:intergenic | 20.0% |
| !! | TATTTAGCCAATTATTAACA+AGG | - | chr2.4:43403436-43403455 | MS.gene76773:intron | 20.0% |
| !! | TTAAAACTAATCTGAATTTC+GGG | + | chr2.4:43405576-43405595 | None:intergenic | 20.0% |
| !! | TTAACTACAAAAATATTGCA+TGG | + | chr2.4:43404403-43404422 | None:intergenic | 20.0% |
| !! | TTATAAATTAAGTGTATACC+AGG | + | chr2.4:43403832-43403851 | None:intergenic | 20.0% |
| !! | TTGAAAACAAAAACAGTAAA+AGG | + | chr2.4:43402564-43402583 | None:intergenic | 20.0% |
| !! | TTGATTAGGAAAAAAATCAT+AGG | + | chr2.4:43405473-43405492 | None:intergenic | 20.0% |
| !! | TTGTAAATATATATCATACC+TGG | + | chr2.4:43403700-43403719 | None:intergenic | 20.0% |
| !!! | AAACATATTAAGCTTTTAGA+AGG | + | chr2.4:43404187-43404206 | None:intergenic | 20.0% |
| !!! | AAGCAAAGAATTTTTTTTTC+TGG | - | chr2.4:43405263-43405282 | MS.gene76773:intron | 20.0% |
| !!! | ACAAAAATTATTGAGTTGAA+TGG | + | chr2.4:43404710-43404729 | None:intergenic | 20.0% |
| !!! | AGCAAAGAATTTTTTTTTCT+GGG | - | chr2.4:43405264-43405283 | MS.gene76773:intron | 20.0% |
| !!! | GTTTTTGTAGTTTATAGATA+AGG | + | chr2.4:43405517-43405536 | None:intergenic | 20.0% |
| !!! | TGTTGAGTTAATTTTTCTAT+TGG | + | chr2.4:43402971-43402990 | None:intergenic | 20.0% |
| !!! | TTAATTGTTGTTTTTATGAG+GGG | + | chr2.4:43402833-43402852 | None:intergenic | 20.0% |
| !!! | TTCTAAAAGCTTAATATGTT+TGG | - | chr2.4:43404186-43404205 | MS.gene76773:intron | 20.0% |
| ! | AAAATGCAAAATGTTGACAA+CGG | + | chr2.4:43406543-43406562 | None:intergenic | 25.0% |
| ! | AAAATTTACGTGTAAACTTC+AGG | - | chr2.4:43405693-43405712 | MS.gene76773:CDS | 25.0% |
| ! | AAATACACTTAATTCATCGA+TGG | - | chr2.4:43403796-43403815 | MS.gene76773:intron | 25.0% |
| ! | AAATCATATACCCAATTTAG+TGG | - | chr2.4:43402777-43402796 | MS.gene76773:intron | 25.0% |
| ! | AATATCTTCTGATTATTCCA+AGG | - | chr2.4:43404267-43404286 | MS.gene76773:intron | 25.0% |
| ! | AATCATATACCCAATTTAGT+GGG | - | chr2.4:43402778-43402797 | MS.gene76773:intron | 25.0% |
| ! | AATTAAAATTATGCTGTCCT+TGG | + | chr2.4:43404287-43404306 | None:intergenic | 25.0% |
| ! | ACAAAAACAAGATAGAATCT+TGG | - | chr2.4:43405529-43405548 | MS.gene76773:intron | 25.0% |
| ! | ATATCCATAGATGAAGAAAA+TGG | + | chr2.4:43405754-43405773 | None:intergenic | 25.0% |
| ! | CTAAATTGGGTATATGATTT+CGG | + | chr2.4:43402777-43402796 | None:intergenic | 25.0% |
| ! | CTATAAAAGCTTGATATAGA+TGG | - | chr2.4:43406339-43406358 | MS.gene76773:intron | 25.0% |
| ! | GAATGATATTATGATAGTAC+TGG | - | chr2.4:43405040-43405059 | MS.gene76773:intron | 25.0% |
| ! | GACTAATAACGATCAATATA+GGG | + | chr2.4:43403403-43403422 | None:intergenic | 25.0% |
| ! | GCTTATTCGTTAAAAAGAAA+TGG | + | chr2.4:43405399-43405418 | None:intergenic | 25.0% |
| ! | GTAAATTAATTCTGTTGATC+TGG | - | chr2.4:43406033-43406052 | MS.gene76773:intron | 25.0% |
| ! | TCAGAAGATATTACGTTAAA+TGG | + | chr2.4:43404259-43404278 | None:intergenic | 25.0% |
| ! | TTAAATTGAAAACTCCTTCT+TGG | - | chr2.4:43403240-43403259 | MS.gene76773:intron | 25.0% |
| !! | GAACAAGTGAATTTTTAATC+TGG | + | chr2.4:43403505-43403524 | None:intergenic | 25.0% |
| !! | TCAACATTTTGCATTTTATG+TGG | - | chr2.4:43406546-43406565 | MS.gene76773:intron | 25.0% |
| !! | TCAACTCAATAATTTTTGTC+CGG | - | chr2.4:43404711-43404730 | MS.gene76773:intron | 25.0% |
| !!! | CTATACTTTTGACTTTCTTT+TGG | - | chr2.4:43406698-43406717 | MS.gene76773:intron | 25.0% |
| !!! | GCAAAGAATTTTTTTTTCTG+GGG | - | chr2.4:43405265-43405284 | MS.gene76773:intron | 25.0% |
| !!! | TAATTGTTGTTTTTATGAGG+GGG | + | chr2.4:43402832-43402851 | None:intergenic | 25.0% |
| AAAACTTACAACTTAATCGC+AGG | + | chr2.4:43402913-43402932 | None:intergenic | 30.0% | |
| AAACTAAATGGTTACATCCA+GGG | - | chr2.4:43403540-43403559 | MS.gene76773:intron | 30.0% | |
| AAACTCCTTCTTGGAATAAT+CGG | - | chr2.4:43403249-43403268 | MS.gene76773:intron | 30.0% | |
| AAACTTACAACTTAATCGCA+GGG | + | chr2.4:43402912-43402931 | None:intergenic | 30.0% | |
| AAGATTTATAGTGTTACAGC+AGG | + | chr2.4:43403674-43403693 | None:intergenic | 30.0% | |
| AATATTGTACTGTTTAGCGA+AGG | - | chr2.4:43403994-43404013 | MS.gene76773:intron | 30.0% | |
| ACTGATTGGATTTGAAGAAT+AGG | - | chr2.4:43406133-43406152 | MS.gene76773:intron | 30.0% | |
| AGATAGAATCTTGGTTCATT+TGG | - | chr2.4:43405538-43405557 | MS.gene76773:intron | 30.0% | |
| ATGCATCCCTTGTTAATAAT+TGG | + | chr2.4:43403446-43403465 | None:intergenic | 30.0% | |
| CATACACAATCAAATAGATG+AGG | + | chr2.4:43405021-43405040 | None:intergenic | 30.0% | |
| GAAATGTCACAACTTTATTG+TGG | - | chr2.4:43403595-43403614 | MS.gene76773:intron | 30.0% | |
| GAGTATGATGTACATATAGT+TGG | + | chr2.4:43403931-43403950 | None:intergenic | 30.0% | |
| GCTAAACAGTACAATATTTG+TGG | + | chr2.4:43403992-43404011 | None:intergenic | 30.0% | |
| GGACTAATAACGATCAATAT+AGG | + | chr2.4:43403404-43403423 | None:intergenic | 30.0% | |
| GGCTAAATAGACTATAGATA+TGG | + | chr2.4:43403425-43403444 | None:intergenic | 30.0% | |
| TAAACTAAATGGTTACATCC+AGG | - | chr2.4:43403539-43403558 | MS.gene76773:intron | 30.0% | |
| TATGACAAAAGTTACTCCTT+TGG | + | chr2.4:43403131-43403150 | None:intergenic | 30.0% | |
| TCAAATTATCTTTCCCAACA+TGG | - | chr2.4:43404354-43404373 | MS.gene76773:intron | 30.0% | |
| TCAACAAAGAGTTGTTAAGT+GGG | + | chr2.4:43403159-43403178 | None:intergenic | 30.0% | |
| TCACTTTCATTCAGAAGAAT+GGG | - | chr2.4:43404099-43404118 | MS.gene76773:intron | 30.0% | |
| TTAACTAAACACACTAAGCA+TGG | + | chr2.4:43402608-43402627 | None:intergenic | 30.0% | |
| TTAGGAAAAAAATCATAGGC+TGG | + | chr2.4:43405469-43405488 | None:intergenic | 30.0% | |
| TTCACTTTCATTCAGAAGAA+TGG | - | chr2.4:43404098-43404117 | MS.gene76773:intron | 30.0% | |
| TTCGTTAAAAAGAAATGGAG+AGG | + | chr2.4:43405394-43405413 | None:intergenic | 30.0% | |
| TTGGAATTGAAACAGATCAA+GGG | + | chr2.4:43405120-43405139 | None:intergenic | 30.0% | |
| ! | AGTTCCATTTTCTTCATCTA+TGG | - | chr2.4:43405747-43405766 | MS.gene76773:intron | 30.0% |
| ! | CTTTTTAACGAATAAGCAGT+TGG | - | chr2.4:43405402-43405421 | MS.gene76773:intron | 30.0% |
| ! | GATTTTCTACTACTACAGTT+TGG | + | chr2.4:43406824-43406843 | None:intergenic | 30.0% |
| ! | GCTAAAGATTTTAGACTGAT+TGG | - | chr2.4:43406119-43406138 | MS.gene76773:intron | 30.0% |
| ! | GTTGTAAGTTTTTGCAGTAA+TGG | - | chr2.4:43402921-43402940 | MS.gene76773:intron | 30.0% |
| !! | GTTGTTTACTGACTTATTGT+TGG | - | chr2.4:43405818-43405837 | MS.gene76773:intron | 30.0% |
| !! | TCAGATTACGTCATTTTGTT+CGG | - | chr2.4:43406221-43406240 | MS.gene76773:intron | 30.0% |
| !!! | AATGCTACACTAGTTTTCAT+CGG | + | chr2.4:43403064-43403083 | None:intergenic | 30.0% |
| AAATGAACCATATCCGTTGT+GGG | - | chr2.4:43405864-43405883 | MS.gene76773:intron | 35.0% | |
| AACAACTTAGCATGCATGAT+TGG | + | chr2.4:43405804-43405823 | None:intergenic | 35.0% | |
| AACACTATAAATCTTGTGCC+AGG | - | chr2.4:43403679-43403698 | MS.gene76773:intron | 35.0% | |
| AAGGATATTAAGGATGACAG+TGG | + | chr2.4:43404566-43404585 | None:intergenic | 35.0% | |
| ACAGTAAAAGGAAAGATACC+AGG | + | chr2.4:43402552-43402571 | None:intergenic | 35.0% | |
| ACCTTCAATACATAAACGCA+TGG | + | chr2.4:43403295-43403314 | None:intergenic | 35.0% | |
| ACGGATATCAAGTAAATTGC+AGG | + | chr2.4:43406524-43406543 | None:intergenic | 35.0% | |
| ACTCGGGGATACAAAAAATT+AGG | + | chr2.4:43404876-43404895 | None:intergenic | 35.0% | |
| AGACTGTTTGATGCCATATA+AGG | + | chr2.4:43404899-43404918 | None:intergenic | 35.0% | |
| AGATAAGGAATTACTGCAAG+TGG | + | chr2.4:43405502-43405521 | None:intergenic | 35.0% | |
| AGGATATTAAGGATGACAGT+GGG | + | chr2.4:43404565-43404584 | None:intergenic | 35.0% | |
| ATCCACATAGCTCAATAATG+AGG | - | chr2.4:43405656-43405675 | MS.gene76773:CDS | 35.0% | |
| ATCTTTCCCAACATGGTATT+CGG | - | chr2.4:43404361-43404380 | MS.gene76773:intron | 35.0% | |
| ATGTCACAACTTTATTGTGG+AGG | - | chr2.4:43403598-43403617 | MS.gene76773:intron | 35.0% | |
| ATTAAGTGTATACCAGGGTT+TGG | + | chr2.4:43403826-43403845 | None:intergenic | 35.0% | |
| ATTGCATACTTAGACTAAGC+AGG | - | chr2.4:43402632-43402651 | MS.gene76773:CDS | 35.0% | |
| CAACAAAGAGTTGTTAAGTG+GGG | + | chr2.4:43403158-43403177 | None:intergenic | 35.0% | |
| CAATTTCCCACTTGAATCAA+CGG | + | chr2.4:43406853-43406872 | None:intergenic | 35.0% | |
| CTTCTTGTCTGATCCAAATT+AGG | - | chr2.4:43403351-43403370 | MS.gene76773:CDS | 35.0% | |
| CTTGGAATTGAAACAGATCA+AGG | + | chr2.4:43405121-43405140 | None:intergenic | 35.0% | |
| GATCTTTAACTCTCGTATCA+TGG | - | chr2.4:43405200-43405219 | MS.gene76773:intron | 35.0% | |
| GCATATCATCAACTTACCAA+AGG | - | chr2.4:43403112-43403131 | MS.gene76773:intron | 35.0% | |
| GGAATAACAAACTGAACCTA+TGG | + | chr2.4:43404936-43404955 | None:intergenic | 35.0% | |
| GTACAATATTTGTGGAGAGT+AGG | + | chr2.4:43403984-43404003 | None:intergenic | 35.0% | |
| GTCAACAAAGAGTTGTTAAG+TGG | + | chr2.4:43403160-43403179 | None:intergenic | 35.0% | |
| TACTGGTATCAAGACAGTAA+AGG | - | chr2.4:43405057-43405076 | MS.gene76773:intron | 35.0% | |
| TCAAACAGTCTCTTCAAGAA+TGG | - | chr2.4:43404908-43404927 | MS.gene76773:intron | 35.0% | |
| TCCACATAGCTCAATAATGA+GGG | - | chr2.4:43405657-43405676 | MS.gene76773:CDS | 35.0% | |
| TCCATGCGTTTATGTATTGA+AGG | - | chr2.4:43403291-43403310 | MS.gene76773:intron | 35.0% | |
| TCGATGTAAGTGTACATTGA+TGG | - | chr2.4:43405963-43405982 | MS.gene76773:intron | 35.0% | |
| TGATCCAAATTAGGATCTAG+AGG | - | chr2.4:43403360-43403379 | MS.gene76773:CDS | 35.0% | |
| TGATGATTGTGGAGTTGTTA+AGG | + | chr2.4:43405169-43405188 | None:intergenic | 35.0% | |
| TGCGTTTATGTATTGAAGGT+AGG | - | chr2.4:43403295-43403314 | MS.gene76773:intron | 35.0% | |
| TGTCTAAGCAATGATGATTG+TGG | + | chr2.4:43405180-43405199 | None:intergenic | 35.0% | |
| TTAGGATTCTGGTACTTGTA+TGG | - | chr2.4:43406441-43406460 | MS.gene76773:intron | 35.0% | |
| TTATATATCACCAAGGTGTG+TGG | - | chr2.4:43404311-43404330 | MS.gene76773:intron | 35.0% | |
| TTGCATACTTAGACTAAGCA+GGG | - | chr2.4:43402633-43402652 | MS.gene76773:CDS | 35.0% | |
| TTTGATGCCATATAAGGACT+CGG | + | chr2.4:43404893-43404912 | None:intergenic | 35.0% | |
| ! | AAAAAGGGTTGACTTTCGAT+TGG | - | chr2.4:43404125-43404144 | MS.gene76773:intron | 35.0% |
| ! | AAACTTCCAAGGTATCAAAG+TGG | + | chr2.4:43404776-43404795 | None:intergenic | 35.0% |
| ! | ATCAGGAAATTTTAGATCCC+TGG | + | chr2.4:43403560-43403579 | None:intergenic | 35.0% |
| ! | CACCAAAAAGCATATGAAGA+TGG | + | chr2.4:43403090-43403109 | None:intergenic | 35.0% |
| ! | GCAAGTGGATGATATTGATT+AGG | + | chr2.4:43405487-43405506 | None:intergenic | 35.0% |
| ! | GGTTTTTGTACACACAATGA+TGG | - | chr2.4:43404804-43404823 | MS.gene76773:intron | 35.0% |
| ! | TACCTTGGAAGTTTCACTTT+TGG | - | chr2.4:43404782-43404801 | MS.gene76773:intron | 35.0% |
| ! | TCATATCTTTTACCCTTTCC+TGG | - | chr2.4:43406582-43406601 | MS.gene76773:intron | 35.0% |
| !! | ACCTTGGAAGTTTCACTTTT+GGG | - | chr2.4:43404783-43404802 | MS.gene76773:intron | 35.0% |
| !! | CAGATTACGTCATTTTGTTC+GGG | - | chr2.4:43406222-43406241 | MS.gene76773:intron | 35.0% |
| !!! | ATGCTACACTAGTTTTCATC+GGG | + | chr2.4:43403063-43403082 | None:intergenic | 35.0% |
| !!! | ATTTTTGTCCGGCCTTATTT+AGG | - | chr2.4:43404722-43404741 | MS.gene76773:intron | 35.0% |
| AAACATTGCTTGCTCCTCTA+GGG | + | chr2.4:43402482-43402501 | None:intergenic | 40.0% | |
| AAGACTCAACCAACACAGTA+TGG | + | chr2.4:43404849-43404868 | None:intergenic | 40.0% | |
| AATCAAAGGAAGGATCAACG+CGG | + | chr2.4:43402660-43402679 | None:intergenic | 40.0% | |
| ACAACACTCATGTATCCTCA+TGG | - | chr2.4:43405896-43405915 | MS.gene76773:intron | 40.0% | |
| ACACAGTATGGGTGAAAACA+AGG | + | chr2.4:43404837-43404856 | None:intergenic | 40.0% | |
| ACATTATGTGTACTGGGTGT+AGG | - | chr2.4:43402442-43402461 | MS.gene76773:CDS | 40.0% | |
| ACCCAAAAGTGAAACTTCCA+AGG | + | chr2.4:43404787-43404806 | None:intergenic | 40.0% | |
| AGACTCAACCAACACAGTAT+GGG | + | chr2.4:43404848-43404867 | None:intergenic | 40.0% | |
| AGGAAGAACAGGAATAACAG+GGG | + | chr2.4:43402529-43402548 | None:intergenic | 40.0% | |
| ATAGCTGAAATACACCGCAA+GGG | + | chr2.4:43403878-43403897 | None:intergenic | 40.0% | |
| ATGGATCCGAATACCATGTT+GGG | + | chr2.4:43404370-43404389 | None:intergenic | 40.0% | |
| ATTGCATGGTCCATCAAGTA+TGG | + | chr2.4:43404389-43404408 | None:intergenic | 40.0% | |
| ATTGTCCTGTAGATGACCAA+TGG | - | chr2.4:43406605-43406624 | MS.gene76773:intron | 40.0% | |
| ATTGTGGAGTTGTTAAGGAG+CGG | + | chr2.4:43405164-43405183 | None:intergenic | 40.0% | |
| CAAACTGCACATTTGACTGA+AGG | + | chr2.4:43405926-43405945 | None:intergenic | 40.0% | |
| CAAATGAACCATATCCGTTG+TGG | - | chr2.4:43405863-43405882 | MS.gene76773:intron | 40.0% | |
| CAAGTAAATTGCAGGCATAG+AGG | + | chr2.4:43406516-43406535 | None:intergenic | 40.0% | |
| CAATGCAGAGGAAAGAGAAA+AGG | + | chr2.4:43404490-43404509 | None:intergenic | 40.0% | |
| CACAGTATGGGTGAAAACAA+GGG | + | chr2.4:43404836-43404855 | None:intergenic | 40.0% | |
| CAGAAGAATGGGAGCAAAAA+GGG | - | chr2.4:43404110-43404129 | MS.gene76773:intron | 40.0% | |
| CCAAATTAGGATCTAGAGGT+TGG | - | chr2.4:43403364-43403383 | MS.gene76773:CDS | 40.0% | |
| CCAACCTCTAGATCCTAATT+TGG | + | chr2.4:43403367-43403386 | None:intergenic | 40.0% | |
| CGTGTAAACTTCAGGATGTT+TGG | - | chr2.4:43405701-43405720 | MS.gene76773:intron | 40.0% | |
| CTCTTCAAGAATGGTTCCAT+AGG | - | chr2.4:43404917-43404936 | MS.gene76773:intron | 40.0% | |
| GAAAAGAAAGACAGGATCGT+AGG | - | chr2.4:43406310-43406329 | MS.gene76773:intron | 40.0% | |
| GAGGAAGAACAGGAATAACA+GGG | + | chr2.4:43402530-43402549 | None:intergenic | 40.0% | |
| GGATATTAAGGATGACAGTG+GGG | + | chr2.4:43404564-43404583 | None:intergenic | 40.0% | |
| GGTTTCTATCTGGTTGTCAA+GGG | - | chr2.4:43404677-43404696 | MS.gene76773:intron | 40.0% | |
| GTAAAAGGAAAGATACCAGG+AGG | + | chr2.4:43402549-43402568 | None:intergenic | 40.0% | |
| GTATTCGGATCCATACTTGA+TGG | - | chr2.4:43404376-43404395 | MS.gene76773:intron | 40.0% | |
| GTCCACATTTCAAACCCAAA+GGG | + | chr2.4:43404066-43404085 | None:intergenic | 40.0% | |
| GTGTAAAAGCTGTACAGATC+TGG | + | chr2.4:43403733-43403752 | None:intergenic | 40.0% | |
| GTGTGGTATAGTTGAGACAT+AGG | - | chr2.4:43404328-43404347 | MS.gene76773:intron | 40.0% | |
| GTTTCATTAGGTGTCAGTAC+AGG | + | chr2.4:43406644-43406663 | None:intergenic | 40.0% | |
| TACACCCAGTACACATAATG+TGG | + | chr2.4:43402443-43402462 | None:intergenic | 40.0% | |
| TACACTGAGCACAGTAGATA+GGG | + | chr2.4:43404454-43404473 | None:intergenic | 40.0% | |
| TATAGCTGAAATACACCGCA+AGG | + | chr2.4:43403879-43403898 | None:intergenic | 40.0% | |
| TATGGATCCGAATACCATGT+TGG | + | chr2.4:43404371-43404390 | None:intergenic | 40.0% | |
| TCAGAAGAATGGGAGCAAAA+AGG | - | chr2.4:43404109-43404128 | MS.gene76773:intron | 40.0% | |
| TGCAGTAGAAGATACCGTTT+CGG | + | chr2.4:43406675-43406694 | None:intergenic | 40.0% | |
| TGGACACGCTAAGGATATTA+AGG | + | chr2.4:43404576-43404595 | None:intergenic | 40.0% | |
| TGGATCCGATTATTCCAAGA+AGG | + | chr2.4:43403257-43403276 | None:intergenic | 40.0% | |
| TGGTTTCTATCTGGTTGTCA+AGG | - | chr2.4:43404676-43404695 | MS.gene76773:intron | 40.0% | |
| TTGACAACCAGATAGAAACC+AGG | + | chr2.4:43404677-43404696 | None:intergenic | 40.0% | |
| TTGATGCCATATAAGGACTC+GGG | + | chr2.4:43404892-43404911 | None:intergenic | 40.0% | |
| TTGTTCGGGCTTCAATTTGT+TGG | - | chr2.4:43406236-43406255 | MS.gene76773:intron | 40.0% | |
| ! | AACCACCCAACTATTGGTTA+TGG | - | chr2.4:43405367-43405386 | MS.gene76773:intron | 40.0% |
| ! | AACCCTTTGGGTTTGAAATG+TGG | - | chr2.4:43404061-43404080 | MS.gene76773:intron | 40.0% |
| ! | ACCACCCAACTATTGGTTAT+GGG | - | chr2.4:43405368-43405387 | MS.gene76773:intron | 40.0% |
| ! | AGTTTTTGATACCATGCCCA+CGG | - | chr2.4:43404156-43404175 | MS.gene76773:intron | 40.0% |
| ! | ATTTGTCTGAGATGTGTCCA+TGG | - | chr2.4:43405223-43405242 | MS.gene76773:intron | 40.0% |
| ! | CAAGGTATCAAAGTGGCTTT+GGG | + | chr2.4:43404769-43404788 | None:intergenic | 40.0% |
| ! | CGCCATCTTCATATGCTTTT+TGG | - | chr2.4:43403085-43403104 | MS.gene76773:intron | 40.0% |
| ! | TGTTCGGGCTTCAATTTGTT+GGG | - | chr2.4:43406237-43406256 | MS.gene76773:intron | 40.0% |
| ! | TGTTTTCACCCATACTGTGT+TGG | - | chr2.4:43404837-43404856 | MS.gene76773:intron | 40.0% |
| !! | CTATGTCCGTTGATTCAAGT+GGG | - | chr2.4:43406844-43406863 | MS.gene76773:CDS | 40.0% |
| !! | GATCTAGAGGTTGGTAAAGA+TGG | - | chr2.4:43403373-43403392 | MS.gene76773:CDS | 40.0% |
| !!! | ACTAGTTTTCATCGGGAATG+AGG | + | chr2.4:43403056-43403075 | None:intergenic | 40.0% |
| AAAACGTGAGTTTCGAACCC+AGG | - | chr2.4:43402711-43402730 | MS.gene76773:intron | 45.0% | |
| AAAGAGAAAAGGCTACACCG+AGG | + | chr2.4:43404479-43404498 | None:intergenic | 45.0% | |
| AAAGTGAGGTCTTGACTGCA+GGG | + | chr2.4:43406796-43406815 | None:intergenic | 45.0% | |
| AAATTTCCTGATGTGCCTGC+AGG | - | chr2.4:43403568-43403587 | MS.gene76773:intron | 45.0% | |
| AACAGAAACCTTGCAGGATG+TGG | + | chr2.4:43404639-43404658 | None:intergenic | 45.0% | |
| AACATCCTGCTTTACCCTAG+AGG | - | chr2.4:43402465-43402484 | MS.gene76773:CDS | 45.0% | |
| AAGATACCAGGAGGAAGAAC+AGG | + | chr2.4:43402540-43402559 | None:intergenic | 45.0% | |
| AAGGACACACACAATCTCAG+GGG | - | chr2.4:43405323-43405342 | MS.gene76773:intron | 45.0% | |
| AAGGTTTCTGTTCCCTTGCT+TGG | - | chr2.4:43404647-43404666 | MS.gene76773:intron | 45.0% | |
| ACAAGGACACACACAATCTC+AGG | - | chr2.4:43405321-43405340 | MS.gene76773:intron | 45.0% | |
| AGAGGCCCATAACCAATAGT+TGG | + | chr2.4:43405376-43405395 | None:intergenic | 45.0% | |
| ATCAAAGGAAGGATCAACGC+GGG | + | chr2.4:43402659-43402678 | None:intergenic | 45.0% | |
| ATCAAATAGATGAGGCCCCA+AGG | + | chr2.4:43405013-43405032 | None:intergenic | 45.0% | |
| ATCGATGGTATACCAAACCC+TGG | - | chr2.4:43403811-43403830 | MS.gene76773:intron | 45.0% | |
| ATTAAGGATGACAGTGGGGT+AGG | + | chr2.4:43404560-43404579 | None:intergenic | 45.0% | |
| ATTTGTGGAGAGTAGGTCAC+TGG | + | chr2.4:43403977-43403996 | None:intergenic | 45.0% | |
| CAAACATTGCTTGCTCCTCT+AGG | + | chr2.4:43402483-43402502 | None:intergenic | 45.0% | |
| CAAGGACACACACAATCTCA+GGG | - | chr2.4:43405322-43405341 | MS.gene76773:intron | 45.0% | |
| CAAGGGGAAAGAAGAAAGGA+AGG | + | chr2.4:43403861-43403880 | None:intergenic | 45.0% | |
| CAGACTTCTCGAAAGTAGCT+TGG | + | chr2.4:43405139-43405158 | None:intergenic | 45.0% | |
| CCACTTGAATCAACGGACAT+AGG | + | chr2.4:43406846-43406865 | None:intergenic | 45.0% | |
| CCCTTGTGCAAAAACCCTTT+GGG | - | chr2.4:43404049-43404068 | MS.gene76773:intron | 45.0% | |
| CGTCCACATTTCAAACCCAA+AGG | + | chr2.4:43404067-43404086 | None:intergenic | 45.0% | |
| CTACAGGACAATCCAGGAAA+GGG | + | chr2.4:43406597-43406616 | None:intergenic | 45.0% | |
| CTCAACTATACCACACACCT+TGG | + | chr2.4:43404324-43404343 | None:intergenic | 45.0% | |
| GAGGCCCATAACCAATAGTT+GGG | + | chr2.4:43405375-43405394 | None:intergenic | 45.0% | |
| GCCCTCATTATTGAGCTATG+TGG | + | chr2.4:43405661-43405680 | None:intergenic | 45.0% | |
| GCTAACAACCACCCAACTAT+TGG | - | chr2.4:43405361-43405380 | MS.gene76773:intron | 45.0% | |
| GGAAAAACCAACAGCCAAAG+TGG | + | chr2.4:43402950-43402969 | None:intergenic | 45.0% | |
| GGAGCCACATTATGTGTACT+GGG | - | chr2.4:43402436-43402455 | MS.gene76773:CDS | 45.0% | |
| GGAGGAAGAACAGGAATAAC+AGG | + | chr2.4:43402531-43402550 | None:intergenic | 45.0% | |
| GTACACTGAGCACAGTAGAT+AGG | + | chr2.4:43404455-43404474 | None:intergenic | 45.0% | |
| GTGTAGCACTTAGCAGTAGA+AGG | + | chr2.4:43404989-43405008 | None:intergenic | 45.0% | |
| GTTACAGCAGGAACATCTCA+CGG | + | chr2.4:43403662-43403681 | None:intergenic | 45.0% | |
| GTTATTCCTGTTCTTCCTCC+TGG | - | chr2.4:43402531-43402550 | MS.gene76773:intron | 45.0% | |
| TAGCTGAAATACACCGCAAG+GGG | + | chr2.4:43403877-43403896 | None:intergenic | 45.0% | |
| TCCTGTAGATGACCAATGGA+AGG | - | chr2.4:43406609-43406628 | MS.gene76773:intron | 45.0% | |
| TCCTTTCTTCTTTCCCCTTG+CGG | - | chr2.4:43403861-43403880 | MS.gene76773:intron | 45.0% | |
| TCGTACAAGTGTCAGACACA+AGG | - | chr2.4:43405304-43405323 | MS.gene76773:intron | 45.0% | |
| TCTACAGGACAATCCAGGAA+AGG | + | chr2.4:43406598-43406617 | None:intergenic | 45.0% | |
| TCTCTTTCCTCTGCATTGCT+TGG | - | chr2.4:43404492-43404511 | MS.gene76773:intron | 45.0% | |
| TGAAACAACCAGCTCCGAAA+CGG | - | chr2.4:43406658-43406677 | MS.gene76773:intron | 45.0% | |
| TGATGCCATATAAGGACTCG+GGG | + | chr2.4:43404891-43404910 | None:intergenic | 45.0% | |
| TGTATCCCCGAGTCCTTATA+TGG | - | chr2.4:43404883-43404902 | MS.gene76773:intron | 45.0% | |
| TGTGACATTTCCATTCCTGC+AGG | + | chr2.4:43403586-43403605 | None:intergenic | 45.0% | |
| TTACAACTTAATCGCAGGGC+CGG | + | chr2.4:43402908-43402927 | None:intergenic | 45.0% | |
| TTAGGTGTCAGTACAGGAGT+TGG | + | chr2.4:43406638-43406657 | None:intergenic | 45.0% | |
| TTGTGGAGTTGTTAAGGAGC+GGG | + | chr2.4:43405163-43405182 | None:intergenic | 45.0% | |
| TTTCCTCTGCATTGCTTGGT+GGG | - | chr2.4:43404496-43404515 | MS.gene76773:intron | 45.0% | |
| ! | ACCCAAAGGGTTTTTGCACA+AGG | + | chr2.4:43404053-43404072 | None:intergenic | 45.0% |
| ! | AGGGTTGACTTTCGATTGGT+TGG | - | chr2.4:43404129-43404148 | MS.gene76773:intron | 45.0% |
| ! | CAAGCTACTTTCGAGAAGTC+TGG | - | chr2.4:43405137-43405156 | MS.gene76773:intron | 45.0% |
| ! | CCAAAGCCACTTTGATACCT+TGG | - | chr2.4:43404767-43404786 | MS.gene76773:intron | 45.0% |
| ! | CCAAAGGGTTTTTGCACAAG+GGG | + | chr2.4:43404051-43404070 | None:intergenic | 45.0% |
| ! | CCAAGGTATCAAAGTGGCTT+TGG | + | chr2.4:43404770-43404789 | None:intergenic | 45.0% |
| ! | CCCAAAGGGTTTTTGCACAA+GGG | + | chr2.4:43404052-43404071 | None:intergenic | 45.0% |
| ! | GAGGATACATGAGTGTTGTC+CGG | + | chr2.4:43405895-43405914 | None:intergenic | 45.0% |
| ! | GTTTGAAATGTGGACGTGGT+GGG | - | chr2.4:43404071-43404090 | MS.gene76773:intron | 45.0% |
| ! | GTTTTTGATACCATGCCCAC+GGG | - | chr2.4:43404157-43404176 | MS.gene76773:intron | 45.0% |
| ! | TCGGAGCTGGTTGTTTCATT+AGG | + | chr2.4:43406656-43406675 | None:intergenic | 45.0% |
| ! | TTGGGTTTGAAATGTGGACG+TGG | - | chr2.4:43404067-43404086 | MS.gene76773:intron | 45.0% |
| ! | TTTGAAATGTGGACGTGGTG+GGG | - | chr2.4:43404072-43404091 | MS.gene76773:intron | 45.0% |
| ! | TTTGGGCCCTCCAAATTTTG+TGG | - | chr2.4:43402854-43402873 | MS.gene76773:intron | 45.0% |
| !! | ACAGTTTGGCTCTCAAAGTG+AGG | + | chr2.4:43406810-43406829 | None:intergenic | 45.0% |
| !! | ATATGATTTCGGTGCTGCAG+TGG | + | chr2.4:43402766-43402785 | None:intergenic | 45.0% |
| !! | CCTATGTCCGTTGATTCAAG+TGG | - | chr2.4:43406843-43406862 | MS.gene76773:CDS | 45.0% |
| !! | CTTTTAGAAGGTTTGCCCGT+GGG | + | chr2.4:43404175-43404194 | None:intergenic | 45.0% |
| !! | TGCAGTAATGGATGCCACTT+TGG | - | chr2.4:43402933-43402952 | MS.gene76773:intron | 45.0% |
| AAACCAGGTGCACCAAGCAA+GGG | + | chr2.4:43404662-43404681 | None:intergenic | 50.0% | |
| AATTATGTCCCCCGTGACCT+GGG | + | chr2.4:43402731-43402750 | None:intergenic | 50.0% | |
| ACATTGCTAATGCACGCACG+TGG | - | chr2.4:43403628-43403647 | MS.gene76773:intron | 50.0% | |
| ACCGCAAGGGGAAAGAAGAA+AGG | + | chr2.4:43403865-43403884 | None:intergenic | 50.0% | |
| ACTGTGCTCAGTGTACACCT+CGG | - | chr2.4:43404459-43404478 | MS.gene76773:intron | 50.0% | |
| AGAAACCTTGCAGGATGTGG+TGG | + | chr2.4:43404636-43404655 | None:intergenic | 50.0% | |
| AGAAGATACCGTTTCGGAGC+TGG | + | chr2.4:43406669-43406688 | None:intergenic | 50.0% | |
| ATATCCGTTGTGGGAACTGC+CGG | - | chr2.4:43405873-43405892 | MS.gene76773:intron | 50.0% | |
| CAAAGTGAGGTCTTGACTGC+AGG | + | chr2.4:43406797-43406816 | None:intergenic | 50.0% | |
| CAAGGGAACAGAAACCTTGC+AGG | + | chr2.4:43404645-43404664 | None:intergenic | 50.0% | |
| CATGGACACACATACGTGTG+TGG | + | chr2.4:43403277-43403296 | None:intergenic | 50.0% | |
| CCAGGGCCACAAAATTTGGA+GGG | + | chr2.4:43402863-43402882 | None:intergenic | 50.0% | |
| CCCCTTGTGCAAAAACCCTT+TGG | - | chr2.4:43404048-43404067 | MS.gene76773:intron | 50.0% | |
| CGGAGCCACATTATGTGTAC+TGG | - | chr2.4:43402435-43402454 | MS.gene76773:CDS | 50.0% | |
| CTCATGACAGTCGCGTGTTA+TGG | + | chr2.4:43406479-43406498 | None:intergenic | 50.0% | |
| CTTTCCTCTGCATTGCTTGG+TGG | - | chr2.4:43404495-43404514 | MS.gene76773:intron | 50.0% | |
| GCCAGCTAAGGGCCTAAATA+AGG | + | chr2.4:43404737-43404756 | None:intergenic | 50.0% | |
| GCCCATAACCAATAGTTGGG+TGG | + | chr2.4:43405372-43405391 | None:intergenic | 50.0% | |
| GCCTTCCATTGGTCATCTAC+AGG | + | chr2.4:43406613-43406632 | None:intergenic | 50.0% | |
| GCTAAGGGCCTAAATAAGGC+CGG | + | chr2.4:43404733-43404752 | None:intergenic | 50.0% | |
| GCTTCATTTGCAGCACACCA+TGG | + | chr2.4:43404604-43404623 | None:intergenic | 50.0% | |
| GGCCTGATTGCACTTGCTTT+GGG | - | chr2.4:43402882-43402901 | MS.gene76773:intron | 50.0% | |
| GGTCATCTACAGGACAATCC+AGG | + | chr2.4:43406603-43406622 | None:intergenic | 50.0% | |
| TAATTATGTCCCCCGTGACC+TGG | + | chr2.4:43402732-43402751 | None:intergenic | 50.0% | |
| TGAGCACAGTAGATAGGGCA+GGG | + | chr2.4:43404449-43404468 | None:intergenic | 50.0% | |
| TGAGTTTCGAACCCAGGTCA+CGG | - | chr2.4:43402717-43402736 | MS.gene76773:intron | 50.0% | |
| TGCTAAGTGCTACACGCCTT+GGG | - | chr2.4:43404994-43405013 | MS.gene76773:intron | 50.0% | |
| TGGGGCTGTAGAGTTACTGT+TGG | - | chr2.4:43404515-43404534 | MS.gene76773:intron | 50.0% | |
| TGGTGCACCTGGTTTCTATC+TGG | - | chr2.4:43404667-43404686 | MS.gene76773:intron | 50.0% | |
| TTGACTGAAGGAGCTCCATG+AGG | + | chr2.4:43405914-43405933 | None:intergenic | 50.0% | |
| ! | CCTCCAAATTTTGTGGCCCT+GGG | - | chr2.4:43402861-43402880 | MS.gene76773:intron | 50.0% |
| ! | GATGTGTCCATGGAGTGCTA+AGG | - | chr2.4:43405233-43405252 | MS.gene76773:intron | 50.0% |
| ! | GGTTTGAAATGTGGACGTGG+TGG | - | chr2.4:43404070-43404089 | MS.gene76773:intron | 50.0% |
| ! | TGATTGCACTTGCTTTGGGC+CGG | - | chr2.4:43402886-43402905 | MS.gene76773:intron | 50.0% |
| ! | TTCCTCTGCATTGCTTGGTG+GGG | - | chr2.4:43404497-43404516 | MS.gene76773:intron | 50.0% |
| !! | ATGGATGCCACTTTGGCTGT+TGG | - | chr2.4:43402940-43402959 | MS.gene76773:intron | 50.0% |
| !! | GCCTTATTTAGGCCCTTAGC+TGG | - | chr2.4:43404733-43404752 | MS.gene76773:intron | 50.0% |
| !! | GCTTTTAGAAGGTTTGCCCG+TGG | + | chr2.4:43404176-43404195 | None:intergenic | 50.0% |
| !! | TTGCTCCTCTAGGGTAAAGC+AGG | + | chr2.4:43402473-43402492 | None:intergenic | 50.0% |
| AAGCAAGTGCAATCAGGCCC+AGG | + | chr2.4:43402881-43402900 | None:intergenic | 55.0% | |
| ACACGCGACTGTCATGAGCA+CGG | - | chr2.4:43406481-43406500 | MS.gene76773:intron | 55.0% | |
| AGCAAGTGCAATCAGGCCCA+GGG | + | chr2.4:43402880-43402899 | None:intergenic | 55.0% | |
| AGGCCCAGGGCCACAAAATT+TGG | + | chr2.4:43402867-43402886 | None:intergenic | 55.0% | |
| AGTTTCGAACCCAGGTCACG+GGG | - | chr2.4:43402719-43402738 | MS.gene76773:intron | 55.0% | |
| ATGGTGCACTGGACACGCTA+AGG | + | chr2.4:43404585-43404604 | None:intergenic | 55.0% | |
| CCCAGGGCCACAAAATTTGG+AGG | + | chr2.4:43402864-43402883 | None:intergenic | 55.0% | |
| CGACACACCTTAGCACTCCA+TGG | + | chr2.4:43405243-43405262 | None:intergenic | 55.0% | |
| CTGAGCACAGTAGATAGGGC+AGG | + | chr2.4:43404450-43404469 | None:intergenic | 55.0% | |
| CTGCTAAGTGCTACACGCCT+TGG | - | chr2.4:43404993-43405012 | MS.gene76773:intron | 55.0% | |
| GAAACCAGGTGCACCAAGCA+AGG | + | chr2.4:43404663-43404682 | None:intergenic | 55.0% | |
| GAGCACAGTAGATAGGGCAG+GGG | + | chr2.4:43404448-43404467 | None:intergenic | 55.0% | |
| GAGTTTCGAACCCAGGTCAC+GGG | - | chr2.4:43402718-43402737 | MS.gene76773:intron | 55.0% | |
| GCTAAGTGCTACACGCCTTG+GGG | - | chr2.4:43404995-43405014 | MS.gene76773:intron | 55.0% | |
| GGCAGTTCCCACAACGGATA+TGG | + | chr2.4:43405874-43405893 | None:intergenic | 55.0% | |
| GGCCCAAAGCAAGTGCAATC+AGG | + | chr2.4:43402887-43402906 | None:intergenic | 55.0% | |
| GGGCCTGATTGCACTTGCTT+TGG | - | chr2.4:43402881-43402900 | MS.gene76773:intron | 55.0% | |
| GGTGTCAGTACAGGAGTTGG+CGG | + | chr2.4:43406635-43406654 | None:intergenic | 55.0% | |
| GTGTACCACCACATCCTGCA+AGG | - | chr2.4:43404628-43404647 | MS.gene76773:intron | 55.0% | |
| TCCATTCCTGCAGGCACATC+AGG | + | chr2.4:43403577-43403596 | None:intergenic | 55.0% | |
| TCCTGATGTGCCTGCAGGAA+TGG | - | chr2.4:43403573-43403592 | MS.gene76773:intron | 55.0% | |
| TTAGCGTGTCCAGTGCACCA+TGG | - | chr2.4:43404584-43404603 | MS.gene76773:intron | 55.0% | |
| TTGTCCGGCAGTTCCCACAA+CGG | + | chr2.4:43405880-43405899 | None:intergenic | 55.0% | |
| ! | CCCTCCAAATTTTGTGGCCC+TGG | - | chr2.4:43402860-43402879 | MS.gene76773:intron | 55.0% |
| !! | AAGTGGCTTTGGGCAAGTGC+TGG | + | chr2.4:43404759-43404778 | None:intergenic | 55.0% |
| AGAAGGTTTGCCCGTGGGCA+TGG | + | chr2.4:43404170-43404189 | None:intergenic | 60.0% | |
| AGCCCCACCAAGCAATGCAG+AGG | + | chr2.4:43404502-43404521 | None:intergenic | 60.0% | |
| AGGAGTTGGCGGCCTTCCAT+TGG | + | chr2.4:43406624-43406643 | None:intergenic | 60.0% | |
| CACGCGACTGTCATGAGCAC+GGG | - | chr2.4:43406482-43406501 | MS.gene76773:intron | 60.0% | |
| GTTTCGAACCCAGGTCACGG+GGG | - | chr2.4:43402720-43402739 | MS.gene76773:intron | 60.0% | |
| TGCAGCACACCATGGTGCAC+TGG | + | chr2.4:43404596-43404615 | None:intergenic | 60.0% | |
| !! | GGCAAGTGCTGGCCAGCTAA+GGG | + | chr2.4:43404748-43404767 | None:intergenic | 60.0% |
| !! | GTTCCCTTGCTTGGTGCACC+TGG | - | chr2.4:43404656-43404675 | MS.gene76773:intron | 60.0% |
| !! | GGGCAAGTGCTGGCCAGCTA+AGG | + | chr2.4:43404749-43404768 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2.4 | gene | 43402432 | 43406872 | 43402432 | ID=MS.gene76773 |
| chr2.4 | mRNA | 43402432 | 43406872 | 43402432 | ID=MS.gene76773.t1;Parent=MS.gene76773 |
| chr2.4 | exon | 43406752 | 43406872 | 43406752 | ID=MS.gene76773.t1.exon1;Parent=MS.gene76773.t1 |
| chr2.4 | CDS | 43406752 | 43406872 | 43406752 | ID=cds.MS.gene76773.t1;Parent=MS.gene76773.t1 |
| chr2.4 | exon | 43405604 | 43405714 | 43405604 | ID=MS.gene76773.t1.exon2;Parent=MS.gene76773.t1 |
| chr2.4 | CDS | 43405604 | 43405714 | 43405604 | ID=cds.MS.gene76773.t1;Parent=MS.gene76773.t1 |
| chr2.4 | exon | 43403337 | 43403449 | 43403337 | ID=MS.gene76773.t1.exon3;Parent=MS.gene76773.t1 |
| chr2.4 | CDS | 43403337 | 43403449 | 43403337 | ID=cds.MS.gene76773.t1;Parent=MS.gene76773.t1 |
| chr2.4 | exon | 43402625 | 43402687 | 43402625 | ID=MS.gene76773.t1.exon4;Parent=MS.gene76773.t1 |
| chr2.4 | CDS | 43402625 | 43402687 | 43402625 | ID=cds.MS.gene76773.t1;Parent=MS.gene76773.t1 |
| chr2.4 | exon | 43402432 | 43402503 | 43402432 | ID=MS.gene76773.t1.exon5;Parent=MS.gene76773.t1 |
| chr2.4 | CDS | 43402432 | 43402503 | 43402432 | ID=cds.MS.gene76773.t1;Parent=MS.gene76773.t1 |
| Gene Sequence |
| Protein sequence |
