Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene93500.t1 | XP_003598994.1 | 94.3 | 670 | 32 | 2 | 1 | 669 | 1 | 665 | 0.00E+00 | 1126.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene93500.t1 | G7IZA9 | 94.3 | 670 | 32 | 2 | 1 | 669 | 1 | 665 | 0.0e+00 | 1126.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049150 | MS.gene93500 | 0.814221 | 1.72E-51 | -1.69E-46 |
| MS.gene049153 | MS.gene93500 | 0.807462 | 4.99E-50 | -1.69E-46 |
| MS.gene049195 | MS.gene93500 | 0.819633 | 1.05E-52 | -1.69E-46 |
| MS.gene04933 | MS.gene93500 | 0.814866 | 1.24E-51 | -1.69E-46 |
| MS.gene049378 | MS.gene93500 | 0.834688 | 2.59E-56 | -1.69E-46 |
| MS.gene050021 | MS.gene93500 | 0.812015 | 5.24E-51 | -1.69E-46 |
| MS.gene050226 | MS.gene93500 | 0.833557 | 4.98E-56 | -1.69E-46 |
| MS.gene050227 | MS.gene93500 | 0.857537 | 1.53E-62 | -1.69E-46 |
| MS.gene050228 | MS.gene93500 | 0.842983 | 1.85E-58 | -1.69E-46 |
| MS.gene050330 | MS.gene93500 | -0.846627 | 1.93E-59 | -1.69E-46 |
| MS.gene050442 | MS.gene93500 | 0.816292 | 5.96E-52 | -1.69E-46 |
| MS.gene050623 | MS.gene93500 | -0.80229 | 6.02E-49 | -1.69E-46 |
| MS.gene050642 | MS.gene93500 | 0.816847 | 4.48E-52 | -1.69E-46 |
| MS.gene050719 | MS.gene93500 | 0.809545 | 1.79E-50 | -1.69E-46 |
| MS.gene050721 | MS.gene93500 | 0.807991 | 3.86E-50 | -1.69E-46 |
| MS.gene050724 | MS.gene93500 | 0.80857 | 2.90E-50 | -1.69E-46 |
| MS.gene050750 | MS.gene93500 | 0.848747 | 5.03E-60 | -1.69E-46 |
| MS.gene050787 | MS.gene93500 | 0.833122 | 6.39E-56 | -1.69E-46 |
| MS.gene050820 | MS.gene93500 | 0.85284 | 3.54E-61 | -1.69E-46 |
| MS.gene050953 | MS.gene93500 | 0.837227 | 5.89E-57 | -1.69E-46 |
| MS.gene05119 | MS.gene93500 | -0.816725 | 4.77E-52 | -1.69E-46 |
| MS.gene051265 | MS.gene93500 | 0.817554 | 3.10E-52 | -1.69E-46 |
| MS.gene051860 | MS.gene93500 | 0.846335 | 2.32E-59 | -1.69E-46 |
| MS.gene051983 | MS.gene93500 | 0.851952 | 6.35E-61 | -1.69E-46 |
| MS.gene052011 | MS.gene93500 | -0.826522 | 2.59E-54 | -1.69E-46 |
| MS.gene052176 | MS.gene93500 | 0.803037 | 4.22E-49 | -1.69E-46 |
| MS.gene052253 | MS.gene93500 | 0.802483 | 5.49E-49 | -1.69E-46 |
| MS.gene052389 | MS.gene93500 | 0.838528 | 2.73E-57 | -1.69E-46 |
| MS.gene053054 | MS.gene93500 | -0.808107 | 3.64E-50 | -1.69E-46 |
| MS.gene053584 | MS.gene93500 | 0.8123 | 4.54E-51 | -1.69E-46 |
| MS.gene053836 | MS.gene93500 | 0.831107 | 2.01E-55 | -1.69E-46 |
| MS.gene054183 | MS.gene93500 | 0.839262 | 1.76E-57 | -1.69E-46 |
| MS.gene054291 | MS.gene93500 | -0.844604 | 6.82E-59 | -1.69E-46 |
| MS.gene054405 | MS.gene93500 | 0.832886 | 7.32E-56 | -1.69E-46 |
| MS.gene054468 | MS.gene93500 | 0.837974 | 3.79E-57 | -1.69E-46 |
| MS.gene054473 | MS.gene93500 | 0.807303 | 5.40E-50 | -1.69E-46 |
| MS.gene054918 | MS.gene93500 | 0.833382 | 5.51E-56 | -1.69E-46 |
| MS.gene054930 | MS.gene93500 | 0.816644 | 4.97E-52 | -1.69E-46 |
| MS.gene054942 | MS.gene93500 | 0.816947 | 4.25E-52 | -1.69E-46 |
| MS.gene054983 | MS.gene93500 | 0.816697 | 4.84E-52 | -1.69E-46 |
| MS.gene055356 | MS.gene93500 | 0.80806 | 3.73E-50 | -1.69E-46 |
| MS.gene055358 | MS.gene93500 | 0.82569 | 4.09E-54 | -1.69E-46 |
| MS.gene055701 | MS.gene93500 | 0.816498 | 5.36E-52 | -1.69E-46 |
| MS.gene056087 | MS.gene93500 | 0.805929 | 1.05E-49 | -1.69E-46 |
| MS.gene056297 | MS.gene93500 | 0.809583 | 1.76E-50 | -1.69E-46 |
| MS.gene056506 | MS.gene93500 | 0.839641 | 1.40E-57 | -1.69E-46 |
| MS.gene056723 | MS.gene93500 | 0.801383 | 9.24E-49 | -1.69E-46 |
| MS.gene056979 | MS.gene93500 | 0.851576 | 8.11E-61 | -1.69E-46 |
| MS.gene057026 | MS.gene93500 | 0.814374 | 1.59E-51 | -1.69E-46 |
| MS.gene057121 | MS.gene93500 | 0.833931 | 4.02E-56 | -1.69E-46 |
| MS.gene057244 | MS.gene93500 | -0.828306 | 9.68E-55 | -1.69E-46 |
| MS.gene057245 | MS.gene93500 | 0.802527 | 5.38E-49 | -1.69E-46 |
| MS.gene057469 | MS.gene93500 | 0.819265 | 1.27E-52 | -1.69E-46 |
| MS.gene057639 | MS.gene93500 | 0.807798 | 4.24E-50 | -1.69E-46 |
| MS.gene058139 | MS.gene93500 | 0.816239 | 6.13E-52 | -1.69E-46 |
| MS.gene058142 | MS.gene93500 | 0.84418 | 8.87E-59 | -1.69E-46 |
| MS.gene058220 | MS.gene93500 | 0.805781 | 1.13E-49 | -1.69E-46 |
| MS.gene058234 | MS.gene93500 | 0.803193 | 3.92E-49 | -1.69E-46 |
| MS.gene058710 | MS.gene93500 | 0.818643 | 1.76E-52 | -1.69E-46 |
| MS.gene058736 | MS.gene93500 | 0.819634 | 1.05E-52 | -1.69E-46 |
| MS.gene058739 | MS.gene93500 | 0.821307 | 4.33E-53 | -1.69E-46 |
| MS.gene05886 | MS.gene93500 | 0.828235 | 1.01E-54 | -1.69E-46 |
| MS.gene059128 | MS.gene93500 | 0.817447 | 3.28E-52 | -1.69E-46 |
| MS.gene059161 | MS.gene93500 | 0.81318 | 2.92E-51 | -1.69E-46 |
| MS.gene059247 | MS.gene93500 | 0.847021 | 1.50E-59 | -1.69E-46 |
| MS.gene059609 | MS.gene93500 | 0.812389 | 4.35E-51 | -1.69E-46 |
| MS.gene05984 | MS.gene93500 | 0.8283 | 9.71E-55 | -1.69E-46 |
| MS.gene059896 | MS.gene93500 | -0.836968 | 6.85E-57 | -1.69E-46 |
| MS.gene060137 | MS.gene93500 | -0.82625 | 3.01E-54 | -1.69E-46 |
| MS.gene060322 | MS.gene93500 | 0.808833 | 2.55E-50 | -1.69E-46 |
| MS.gene061040 | MS.gene93500 | -0.818804 | 1.62E-52 | -1.69E-46 |
| MS.gene061114 | MS.gene93500 | -0.885858 | 5.66E-72 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene93500.t1 | MTR_3g025870 | 94.328 | 670 | 32 | 2 | 1 | 669 | 1 | 665 | 0.0 | 1269 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene93500.t1 | AT5G61040 | 31.476 | 718 | 309 | 24 | 1 | 666 | 1 | 587 | 5.71e-73 | 247 |
| MS.gene93500.t1 | AT5G08010 | 30.229 | 698 | 316 | 21 | 1 | 664 | 1 | 561 | 1.12e-54 | 196 |
Find 116 sgRNAs with CRISPR-Local
Find 243 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATCATTTAAAGATCCAATTT+TGG | 0.143154 | 3.4:-18119211 | None:intergenic |
| TGCATCAAGTTTCATCTTCT+TGG | 0.170236 | 3.4:-18119235 | None:intergenic |
| ACCTGATAGGTTGAGAATTA+AGG | 0.176647 | 3.4:-18122106 | None:intergenic |
| ACCATATGATGATAACTTTA+AGG | 0.177959 | 3.4:+18118786 | MS.gene93500:CDS |
| GTTCCTTCCTTGCCCAAAAT+TGG | 0.190143 | 3.4:+18119198 | MS.gene93500:CDS |
| AAAGACATATTCTTCCATTT+TGG | 0.197205 | 3.4:-18119013 | None:intergenic |
| CAACTTTCTAAGGAATTTAA+TGG | 0.229860 | 3.4:-18118961 | None:intergenic |
| GGGTTGTTTGCGGGAGGTTA+AGG | 0.240369 | 3.4:-18118563 | None:intergenic |
| TTCAGTCTTGGGATTTCTCT+TGG | 0.270448 | 3.4:+18120521 | MS.gene93500:CDS |
| GGTTGTTTGCGGGAGGTTAA+GGG | 0.271702 | 3.4:-18118562 | None:intergenic |
| CAAAGAATCATATGATAAAA+AGG | 0.284476 | 3.4:+18120787 | MS.gene93500:CDS |
| CATCTTTATTAATTCTTCAT+AGG | 0.285722 | 3.4:-18122154 | None:intergenic |
| TTCCTTAGAAAGTTGTTTCA+TGG | 0.286371 | 3.4:+18118969 | MS.gene93500:CDS |
| GAGCAAAATACGAGTAGTTT+TGG | 0.297577 | 3.4:+18118826 | MS.gene93500:CDS |
| CGGCGTTTCTCTTCAGTCTT+GGG | 0.311500 | 3.4:+18120510 | MS.gene93500:CDS |
| ACGTCTCCGGGGTTGTTTGC+GGG | 0.313131 | 3.4:-18118572 | None:intergenic |
| AAGGTTCGCTTTCACATGAT+TGG | 0.314462 | 3.4:+18122232 | MS.gene93500:CDS |
| CCTGATAGGTTGAGAATTAA+GGG | 0.320911 | 3.4:-18122105 | None:intergenic |
| GAGTTACAAAATGAAAATTA+TGG | 0.330169 | 3.4:+18120671 | MS.gene93500:CDS |
| CTGGTTATTTAGCTAAATAT+TGG | 0.333394 | 3.4:+18118455 | MS.gene93500:CDS |
| TTATCATCATATGGTGATAA+TGG | 0.336970 | 3.4:-18118778 | None:intergenic |
| CCGGCGTTTCTCTTCAGTCT+TGG | 0.340040 | 3.4:+18120509 | MS.gene93500:CDS |
| CCAGATGAAAGTAAAGTCTT+TGG | 0.340166 | 3.4:+18121990 | MS.gene93500:CDS |
| AGCCATGAAACAACTTTCTA+AGG | 0.343642 | 3.4:-18118971 | None:intergenic |
| CCCTTAATTCTCAACCTATC+AGG | 0.358072 | 3.4:+18122105 | MS.gene93500:CDS |
| CCAAAGACTTTACTTTCATC+TGG | 0.358080 | 3.4:-18121990 | None:intergenic |
| CGAAATAACCTTGTTGTAGA+TGG | 0.359330 | 3.4:-18119051 | None:intergenic |
| CTTCAAGAGCTTCACCTGAT+AGG | 0.366603 | 3.4:-18122119 | None:intergenic |
| ATTCCTATCCACAACTCTTT+CGG | 0.369194 | 3.4:+18118889 | MS.gene93500:CDS |
| AAAACGTTTCGTTGAGAGAA+AGG | 0.374754 | 3.4:-18118920 | None:intergenic |
| TCCTTGGATGGTCCTTCAAC+AGG | 0.378617 | 3.4:+18118658 | MS.gene93500:CDS |
| ATGCAGCTCCTTACCATTGA+AGG | 0.386570 | 3.4:-18120717 | None:intergenic |
| ATATAAAGAGCATGCCAAAA+TGG | 0.389469 | 3.4:+18118999 | MS.gene93500:CDS |
| GAAGCTGAACTTGAGAGGTT+AGG | 0.389764 | 3.4:+18120854 | MS.gene93500:CDS |
| AGTGGAAAACTCACTCAATA+TGG | 0.390330 | 3.4:+18119303 | MS.gene93500:CDS |
| TCAGTCTTGGGATTTCTCTT+GGG | 0.395373 | 3.4:+18120522 | MS.gene93500:CDS |
| TGATTCTTTGCATTCTACTC+TGG | 0.395507 | 3.4:-18120774 | None:intergenic |
| AAGCTGAACTTGAGAGGTTA+GGG | 0.400444 | 3.4:+18120855 | MS.gene93500:CDS |
| GGTGAAACTGCATAGTTTGC+AGG | 0.405373 | 3.4:-18121880 | None:intergenic |
| GTTGTGGATAGGAATCAATT+TGG | 0.417343 | 3.4:-18118881 | None:intergenic |
| GGAGATGTGGCTTCTTATAG+AGG | 0.432304 | 3.4:+18118679 | MS.gene93500:CDS |
| TCCTTAAAGTTATCATCATA+TGG | 0.436346 | 3.4:-18118787 | None:intergenic |
| CACGTCTCCGGGGTTGTTTG+CGG | 0.439128 | 3.4:-18118573 | None:intergenic |
| ATCAATTTGGCAGGAAACTC+AGG | 0.441226 | 3.4:-18118868 | None:intergenic |
| GTTGTTTGCGGGAGGTTAAG+GGG | 0.443607 | 3.4:-18118561 | None:intergenic |
| CAGTGCATTGACTGGAAGTA+AGG | 0.443744 | 3.4:+18119122 | MS.gene93500:CDS |
| TCTAGTGAATTGAATGTTAG+TGG | 0.446663 | 3.4:+18122306 | MS.gene93500:CDS |
| ATGAAACTTGATGCAGTTGA+TGG | 0.447217 | 3.4:+18119243 | MS.gene93500:CDS |
| CTCTGAAGACAAATGATAAG+AGG | 0.447999 | 3.4:-18118503 | None:intergenic |
| GATTCTTTGCATTCTACTCT+GGG | 0.455473 | 3.4:-18120773 | None:intergenic |
| CTTTCACTCGTGTTTCGAGT+TGG | 0.461666 | 3.4:-18121942 | None:intergenic |
| CAACCCCGGAGACGTGAAAA+GGG | 0.464778 | 3.4:+18118580 | MS.gene93500:CDS |
| ATTGTTGAAAGAACCAAGAA+AGG | 0.468316 | 3.4:+18122384 | MS.gene93500:CDS |
| ATTCTCTGATGCGAGTTCCT+TGG | 0.470313 | 3.4:+18118642 | MS.gene93500:CDS |
| GCTCGGATAATTTCCTATCC+AGG | 0.472177 | 3.4:-18120898 | None:intergenic |
| GAAGCCACATCTCCTGTTGA+AGG | 0.474798 | 3.4:-18118670 | None:intergenic |
| ACAACCCCGGAGACGTGAAA+AGG | 0.475375 | 3.4:+18118579 | MS.gene93500:CDS |
| TGGATAGGAATCAATTTGGC+AGG | 0.489229 | 3.4:-18118877 | None:intergenic |
| ACGTGTGATCATTCCTTCAA+TGG | 0.489917 | 3.4:+18120704 | MS.gene93500:CDS |
| CTCTTATCATTTGTCTTCAG+AGG | 0.490889 | 3.4:+18118504 | MS.gene93500:CDS |
| TAATGGTCTACTAACATGCT+CGG | 0.495493 | 3.4:-18118944 | None:intergenic |
| AACTTTAAGGATGGTGCAGA+TGG | 0.499196 | 3.4:+18118799 | MS.gene93500:CDS |
| CCATGATGTTAGTTTCCAAA+AGG | 0.500268 | 3.4:+18122020 | MS.gene93500:CDS |
| GGACATGAATGCGTCAAGCC+TGG | 0.500491 | 3.4:+18120880 | MS.gene93500:CDS |
| AAAATTCTTGCAGATTGATC+CGG | 0.500918 | 3.4:+18121777 | MS.gene93500:intron |
| GGAGGTTAAGGGGCTGCTAA+AGG | 0.506632 | 3.4:-18118551 | None:intergenic |
| GTTGAAGCAGAATGAGAACT+TGG | 0.515778 | 3.4:+18120598 | MS.gene93500:CDS |
| AATGGTCTACTAACATGCTC+GGG | 0.515836 | 3.4:-18118943 | None:intergenic |
| AGGTGGAGAGGCTATTGATA+AGG | 0.520272 | 3.4:+18122358 | MS.gene93500:CDS |
| GTCATCAATAAGTTTCCTCT+AGG | 0.524349 | 3.4:-18122054 | None:intergenic |
| TCATCAATAAGTTTCCTCTA+GGG | 0.524601 | 3.4:-18122053 | None:intergenic |
| ACTGCATAGTTTGCAGGAAG+AGG | 0.525668 | 3.4:-18121874 | None:intergenic |
| ATACGATTTCGCGACAATGT+TGG | 0.527511 | 3.4:+18122272 | MS.gene93500:CDS |
| GATTATAAGCTGCATAAAGC+TGG | 0.528729 | 3.4:+18119144 | MS.gene93500:CDS |
| ATAGGTTGAGAATTAAGGGC+TGG | 0.530163 | 3.4:-18122101 | None:intergenic |
| TTTCGAGCTGACACGGCTAG+TGG | 0.539697 | 3.4:+18121829 | MS.gene93500:CDS |
| TCCTGTTGAAGGACCATCCA+AGG | 0.540053 | 3.4:-18118659 | None:intergenic |
| TGATCATTCCTTCAATGGTA+AGG | 0.545919 | 3.4:+18120709 | MS.gene93500:CDS |
| TGAATGTGATAATGAGGAGG+TGG | 0.547622 | 3.4:+18122341 | MS.gene93500:CDS |
| GTGATAATGAGGAGGTGGAG+AGG | 0.548162 | 3.4:+18122346 | MS.gene93500:CDS |
| AGTTTGATCAGTGCATTGAC+TGG | 0.553765 | 3.4:+18119114 | MS.gene93500:CDS |
| TGTCCGAAAGAGTTGTGGAT+AGG | 0.561918 | 3.4:-18118892 | None:intergenic |
| GCAAAATCTGCTACAAACTC+CGG | 0.565111 | 3.4:-18121796 | None:intergenic |
| TAGGTTGAGAATTAAGGGCT+GGG | 0.566236 | 3.4:-18122100 | None:intergenic |
| CATGATAGTGACGACAAAGA+AGG | 0.571551 | 3.4:+18122213 | MS.gene93500:CDS |
| GTCGTCACTATCATGAATGA+TGG | 0.571660 | 3.4:-18122205 | None:intergenic |
| TGAATGCGTCAAGCCTGGAT+AGG | 0.575622 | 3.4:+18120885 | MS.gene93500:CDS |
| TCTGATGCGAGTTCCTTGGA+TGG | 0.576753 | 3.4:+18118646 | MS.gene93500:CDS |
| TGAACTTGAGAGGTTAGGGT+TGG | 0.576928 | 3.4:+18120859 | MS.gene93500:CDS |
| TGGTCCTTCAACAGGAGATG+TGG | 0.577559 | 3.4:+18118666 | MS.gene93500:CDS |
| AGGTTATTTCGTGTTAGCAA+TGG | 0.581371 | 3.4:+18119063 | MS.gene93500:CDS |
| AGGTGAGTTTCGAGCTGACA+CGG | 0.586885 | 3.4:+18121822 | MS.gene93500:CDS |
| TATGCTTACCTCAACAAGCT+CGG | 0.589234 | 3.4:-18120915 | None:intergenic |
| TATGATGATAACTTTAAGGA+TGG | 0.589573 | 3.4:+18118790 | MS.gene93500:CDS |
| GAAATTATCCGAGCTTGTTG+AGG | 0.590101 | 3.4:+18120907 | MS.gene93500:CDS |
| GAAAGATTCAATGACTGTGA+AGG | 0.591444 | 3.4:+18120649 | MS.gene93500:CDS |
| AGCTTGAAGCTGAACTTGAG+AGG | 0.594301 | 3.4:+18120849 | MS.gene93500:CDS |
| GATTTCGCGACAATGTTGGA+AGG | 0.608266 | 3.4:+18122276 | MS.gene93500:CDS |
| TAAGGGGCTGCTAAAGGACT+CGG | 0.611733 | 3.4:-18118545 | None:intergenic |
| TAACCTCCCGCAAACAACCC+CGG | 0.618799 | 3.4:+18118566 | MS.gene93500:CDS |
| CATCAATAAGTTTCCTCTAG+GGG | 0.619494 | 3.4:-18122052 | None:intergenic |
| GTTGTAGATGGTGATGAAAG+AGG | 0.619822 | 3.4:-18119039 | None:intergenic |
| AGGAAGAGGTGTGGTGACAT+TGG | 0.623249 | 3.4:-18121860 | None:intergenic |
| ATTTCGCGACAATGTTGGAA+GGG | 0.624496 | 3.4:+18122277 | MS.gene93500:CDS |
| GAGATGTGGCTTCTTATAGA+GGG | 0.627578 | 3.4:+18118680 | MS.gene93500:CDS |
| ATCAATAAGTTTCCTCTAGG+GGG | 0.628805 | 3.4:-18122051 | None:intergenic |
| CCAAGACTGAAGAGAAACGC+CGG | 0.633812 | 3.4:-18120509 | None:intergenic |
| TCTCCGGGGTTGTTTGCGGG+AGG | 0.635252 | 3.4:-18118569 | None:intergenic |
| CTATCATGAATGATGGCTGA+TGG | 0.644869 | 3.4:-18122198 | None:intergenic |
| AAGTTGTGAATGTGATAATG+AGG | 0.660939 | 3.4:+18122335 | MS.gene93500:CDS |
| TTTCATCACCATCTACAACA+AGG | 0.679672 | 3.4:+18119043 | MS.gene93500:CDS |
| TGGGATAATAACTTCCAACA+TGG | 0.689562 | 3.4:+18120541 | MS.gene93500:CDS |
| AAACGTAAACTCAGTTCATG+CGG | 0.690091 | 3.4:-18121901 | None:intergenic |
| CAGTTGATGGACGAAGTCGA+AGG | 0.702830 | 3.4:+18119256 | MS.gene93500:CDS |
| TTGTGAATGTGATAATGAGG+AGG | 0.705699 | 3.4:+18122338 | MS.gene93500:CDS |
| ATAGTTTGCAGGAAGAGGTG+TGG | 0.753936 | 3.4:-18121869 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAATATCTTAAAAATATTGA+AGG | - | chr3.4:18120112-18120131 | None:intergenic | 10.0% |
| !!! | AGTTTTAATATATGAAAAAT+GGG | + | chr3.4:18121165-18121184 | MS.gene93500:intron | 10.0% |
| !!! | TAGTTTTAATATATGAAAAA+TGG | + | chr3.4:18121164-18121183 | MS.gene93500:intron | 10.0% |
| !! | AAAAAAGATATTGTATTCTA+TGG | + | chr3.4:18122428-18122447 | MS.gene93500:CDS | 15.0% |
| !! | TACAAAAATAAGTATATGTA+TGG | - | chr3.4:18121506-18121525 | None:intergenic | 15.0% |
| !! | CAAAGAATCATATGATAAAA+AGG | + | chr3.4:18120787-18120806 | MS.gene93500:CDS | 20.0% |
| !! | CATCTTTATTAATTCTTCAT+AGG | - | chr3.4:18122157-18122176 | None:intergenic | 20.0% |
| !! | GAAAAATTGTAATGAAATCT+TGG | + | chr3.4:18119959-18119978 | MS.gene93500:intron | 20.0% |
| !! | GAGTTACAAAATGAAAATTA+TGG | + | chr3.4:18120671-18120690 | MS.gene93500:CDS | 20.0% |
| !! | TAAATATTGGAAAAAGAGTT+TGG | + | chr3.4:18118468-18118487 | MS.gene93500:CDS | 20.0% |
| !! | TTCAAAGAATGGAATTAAAA+TGG | + | chr3.4:18121056-18121075 | MS.gene93500:intron | 20.0% |
| !!! | AAAAGAAAGAGTTCTAAAAA+AGG | - | chr3.4:18119509-18119528 | None:intergenic | 20.0% |
| !!! | AAGATGTTTTTTTAGATAGA+AGG | + | chr3.4:18118605-18118624 | MS.gene93500:CDS | 20.0% |
| !!! | AATTTTCTCTATTCAGTATT+CGG | - | chr3.4:18119092-18119111 | None:intergenic | 20.0% |
| !!! | AGATGTTTTTTTAGATAGAA+GGG | + | chr3.4:18118606-18118625 | MS.gene93500:CDS | 20.0% |
| !!! | ATCATTTAAAGATCCAATTT+TGG | - | chr3.4:18119214-18119233 | None:intergenic | 20.0% |
| !!! | TCATTTAAAGATCCAATTTT+GGG | - | chr3.4:18119213-18119232 | None:intergenic | 20.0% |
| !!! | TTGTAATTTTGATTAACTCA+AGG | - | chr3.4:18120190-18120209 | None:intergenic | 20.0% |
| ! | AAACATTTCAAACACAACAT+AGG | - | chr3.4:18119361-18119380 | None:intergenic | 25.0% |
| ! | AATATTGTTAGTGTGACAAT+GGG | + | chr3.4:18121742-18121761 | MS.gene93500:intron | 25.0% |
| ! | ACCATATGATGATAACTTTA+AGG | + | chr3.4:18118786-18118805 | MS.gene93500:CDS | 25.0% |
| ! | ATAATTTCCTCAAGAATAAC+AGG | - | chr3.4:18119872-18119891 | None:intergenic | 25.0% |
| ! | ATAGAATGAAAAGAAGTCTA+TGG | - | chr3.4:18119908-18119927 | None:intergenic | 25.0% |
| ! | ATATGAGATTTACTTTACAC+TGG | - | chr3.4:18121681-18121700 | None:intergenic | 25.0% |
| ! | CTAATGGAAATTTCAAAGAA+TGG | + | chr3.4:18121045-18121064 | MS.gene93500:intron | 25.0% |
| ! | CTGGTTATTTAGCTAAATAT+TGG | + | chr3.4:18118455-18118474 | MS.gene93500:CDS | 25.0% |
| ! | GAAAAACACAAAAATGTAGT+TGG | + | chr3.4:18119171-18119190 | MS.gene93500:CDS | 25.0% |
| ! | TAGAACTTGAAAGCAAAATA+AGG | - | chr3.4:18121617-18121636 | None:intergenic | 25.0% |
| ! | TATTTAAGCTGTTTAGTTAC+AGG | - | chr3.4:18119686-18119705 | None:intergenic | 25.0% |
| ! | TCCTTAAAGTTATCATCATA+TGG | - | chr3.4:18118790-18118809 | None:intergenic | 25.0% |
| ! | TTATCATCATATGGTGATAA+TGG | - | chr3.4:18118781-18118800 | None:intergenic | 25.0% |
| ! | TTTGTACTTCTAGTAGATAT+TGG | + | chr3.4:18121520-18121539 | MS.gene93500:intron | 25.0% |
| !! | AAAGACATATTCTTCCATTT+TGG | - | chr3.4:18119016-18119035 | None:intergenic | 25.0% |
| !! | CAACTTTCTAAGGAATTTAA+TGG | - | chr3.4:18118964-18118983 | None:intergenic | 25.0% |
| !! | TATGATGATAACTTTAAGGA+TGG | + | chr3.4:18118790-18118809 | MS.gene93500:CDS | 25.0% |
| !!! | GATGTTTTTTTAGATAGAAG+GGG | + | chr3.4:18118607-18118626 | MS.gene93500:CDS | 25.0% |
| !!! | TGTTTTTTCGTTAGTTAGTT+TGG | + | chr3.4:18120255-18120274 | MS.gene93500:intron | 25.0% |
| !!! | TTGCAATATAACGGATTTTT+AGG | - | chr3.4:18119454-18119473 | None:intergenic | 25.0% |
| AAAATTCTTGCAGATTGATC+CGG | + | chr3.4:18121777-18121796 | MS.gene93500:intron | 30.0% | |
| AAACACAAAAATGTAGTTGG+AGG | + | chr3.4:18119174-18119193 | MS.gene93500:CDS | 30.0% | |
| AACACAAAAATGTAGTTGGA+GGG | + | chr3.4:18119175-18119194 | MS.gene93500:CDS | 30.0% | |
| ATATCATTCAGTGCATGTTT+GGG | + | chr3.4:18121229-18121248 | MS.gene93500:intron | 30.0% | |
| ATTGTTGAAAGAACCAAGAA+AGG | + | chr3.4:18122384-18122403 | MS.gene93500:CDS | 30.0% | |
| CAATATTGTTAGTGTGACAA+TGG | + | chr3.4:18121741-18121760 | MS.gene93500:intron | 30.0% | |
| CATTGAGTAAATAGTCACTT+TGG | - | chr3.4:18120401-18120420 | None:intergenic | 30.0% | |
| CTAAACAGCTTAAATATAGC+TGG | + | chr3.4:18119690-18119709 | MS.gene93500:intron | 30.0% | |
| CTGGAAAAAGAAACTTTGTA+TGG | - | chr3.4:18121662-18121681 | None:intergenic | 30.0% | |
| GCTATCAAAACAAACATACA+TGG | - | chr3.4:18121640-18121659 | None:intergenic | 30.0% | |
| GTTTATATTGCTGGAAAATG+AGG | + | chr3.4:18119399-18119418 | MS.gene93500:intron | 30.0% | |
| TACTAACGAAAGATACATTC+AGG | + | chr3.4:18120320-18120339 | MS.gene93500:intron | 30.0% | |
| TCATCAATAAGTTTCCTCTA+GGG | - | chr3.4:18122056-18122075 | None:intergenic | 30.0% | |
| TCTAGTAGATATTGGAATTG+TGG | + | chr3.4:18121528-18121547 | MS.gene93500:intron | 30.0% | |
| TCTAGTGAATTGAATGTTAG+TGG | + | chr3.4:18122306-18122325 | MS.gene93500:CDS | 30.0% | |
| TGGAAAAAGAGTTTGGAAAA+TGG | + | chr3.4:18118475-18118494 | MS.gene93500:CDS | 30.0% | |
| TTCACTGATCTCAGATAATT+AGG | + | chr3.4:18120038-18120057 | MS.gene93500:intron | 30.0% | |
| TTGTTTAGTACCAATGTGTT+TGG | - | chr3.4:18121391-18121410 | None:intergenic | 30.0% | |
| ! | AAGTTGTGAATGTGATAATG+AGG | + | chr3.4:18122335-18122354 | MS.gene93500:CDS | 30.0% |
| ! | AGCTATCAATATGCTTTTCA+GGG | - | chr3.4:18120751-18120770 | None:intergenic | 30.0% |
| ! | ATATAAAGAGCATGCCAAAA+TGG | + | chr3.4:18118999-18119018 | MS.gene93500:CDS | 30.0% |
| ! | TGTTAAGGTGAAAACTTTTG+AGG | - | chr3.4:18121119-18121138 | None:intergenic | 30.0% |
| ! | TTCCTTAGAAAGTTGTTTCA+TGG | + | chr3.4:18118969-18118988 | MS.gene93500:CDS | 30.0% |
| ! | TTTTGACAAAAGCTACACTT+TGG | - | chr3.4:18121313-18121332 | None:intergenic | 30.0% |
| !! | TTCTCTTTTATTTGCCATGT+TGG | - | chr3.4:18120558-18120577 | None:intergenic | 30.0% |
| !! | TTTCATCTGGCTATTTTCAA+GGG | - | chr3.4:18121980-18121999 | None:intergenic | 30.0% |
| !!! | TTTTCTGATGACTTGTTTAG+TGG | + | chr3.4:18119285-18119304 | MS.gene93500:CDS | 30.0% |
| !!! | TTTTGCGTTTTAACTGGTTT+AGG | + | chr3.4:18120085-18120104 | MS.gene93500:intron | 30.0% |
| AAAAAGAGGAGAACCTTTCT+TGG | - | chr3.4:18122400-18122419 | None:intergenic | 35.0% | |
| AAAACGTTTCGTTGAGAGAA+AGG | - | chr3.4:18118923-18118942 | None:intergenic | 35.0% | |
| AAACACACCTGTTATTCTTG+AGG | + | chr3.4:18119862-18119881 | MS.gene93500:intron | 35.0% | |
| AAACGTAAACTCAGTTCATG+CGG | - | chr3.4:18121904-18121923 | None:intergenic | 35.0% | |
| ACACAAAAATGTAGTTGGAG+GGG | + | chr3.4:18119176-18119195 | MS.gene93500:CDS | 35.0% | |
| ACTAACGAAAAAACACATCG+AGG | - | chr3.4:18120250-18120269 | None:intergenic | 35.0% | |
| ACTTGAACCAAACATAGCTA+TGG | - | chr3.4:18121710-18121729 | None:intergenic | 35.0% | |
| AGCCATGAAACAACTTTCTA+AGG | - | chr3.4:18118974-18118993 | None:intergenic | 35.0% | |
| AGTGGAAAACTCACTCAATA+TGG | + | chr3.4:18119303-18119322 | MS.gene93500:CDS | 35.0% | |
| ATCAATAAGTTTCCTCTAGG+GGG | - | chr3.4:18122054-18122073 | None:intergenic | 35.0% | |
| ATGAAACTTGATGCAGTTGA+TGG | + | chr3.4:18119243-18119262 | MS.gene93500:CDS | 35.0% | |
| ATTCCTATCCACAACTCTTT+CGG | + | chr3.4:18118889-18118908 | MS.gene93500:CDS | 35.0% | |
| CAAAATAAGGCATGCAACAT+TGG | - | chr3.4:18121604-18121623 | None:intergenic | 35.0% | |
| CAATCGCAGTTGCAATATAA+CGG | - | chr3.4:18119463-18119482 | None:intergenic | 35.0% | |
| CATCAATAAGTTTCCTCTAG+GGG | - | chr3.4:18122055-18122074 | None:intergenic | 35.0% | |
| CCAAAGACTTTACTTTCATC+TGG | - | chr3.4:18121993-18122012 | None:intergenic | 35.0% | |
| CCAGATGAAAGTAAAGTCTT+TGG | + | chr3.4:18121990-18122009 | MS.gene93500:CDS | 35.0% | |
| CTCTTATCATTTGTCTTCAG+AGG | + | chr3.4:18118504-18118523 | MS.gene93500:CDS | 35.0% | |
| CTTGCAAACGTTTATATTGC+TGG | + | chr3.4:18119390-18119409 | MS.gene93500:intron | 35.0% | |
| GAAAGATTCAATGACTGTGA+AGG | + | chr3.4:18120649-18120668 | MS.gene93500:CDS | 35.0% | |
| GAGGAATTGAGCAATATACA+AGG | - | chr3.4:18121100-18121119 | None:intergenic | 35.0% | |
| GATACTGCCTCAAACATTTA+GGG | + | chr3.4:18120374-18120393 | MS.gene93500:intron | 35.0% | |
| GATATCATTCAGTGCATGTT+TGG | + | chr3.4:18121228-18121247 | MS.gene93500:intron | 35.0% | |
| GATTATAAGCTGCATAAAGC+TGG | + | chr3.4:18119144-18119163 | MS.gene93500:CDS | 35.0% | |
| GATTCTTTGCATTCTACTCT+GGG | - | chr3.4:18120776-18120795 | None:intergenic | 35.0% | |
| GTCATCAATAAGTTTCCTCT+AGG | - | chr3.4:18122057-18122076 | None:intergenic | 35.0% | |
| GTTGTGGATAGGAATCAATT+TGG | - | chr3.4:18118884-18118903 | None:intergenic | 35.0% | |
| TAATGGTCTACTAACATGCT+CGG | - | chr3.4:18118947-18118966 | None:intergenic | 35.0% | |
| TGAAAAGAAGTCTATGGCAT+TGG | - | chr3.4:18119902-18119921 | None:intergenic | 35.0% | |
| TGATACTGCCTCAAACATTT+AGG | + | chr3.4:18120373-18120392 | MS.gene93500:intron | 35.0% | |
| TGATCATTCCTTCAATGGTA+AGG | + | chr3.4:18120709-18120728 | MS.gene93500:CDS | 35.0% | |
| TGATTCTTTGCATTCTACTC+TGG | - | chr3.4:18120777-18120796 | None:intergenic | 35.0% | |
| TGCATCAAGTTTCATCTTCT+TGG | - | chr3.4:18119238-18119257 | None:intergenic | 35.0% | |
| TGGGATAATAACTTCCAACA+TGG | + | chr3.4:18120541-18120560 | MS.gene93500:CDS | 35.0% | |
| TTTCATCACCATCTACAACA+AGG | + | chr3.4:18119043-18119062 | MS.gene93500:CDS | 35.0% | |
| ! | ACCTGATAGGTTGAGAATTA+AGG | - | chr3.4:18122109-18122128 | None:intergenic | 35.0% |
| ! | AGCATAACTGTCACATTTTC+CGG | + | chr3.4:18120932-18120951 | MS.gene93500:intron | 35.0% |
| ! | AGGTTATTTCGTGTTAGCAA+TGG | + | chr3.4:18119063-18119082 | MS.gene93500:CDS | 35.0% |
| ! | CCATGATGTTAGTTTCCAAA+AGG | + | chr3.4:18122020-18122039 | MS.gene93500:CDS | 35.0% |
| ! | CCTGATAGGTTGAGAATTAA+GGG | - | chr3.4:18122108-18122127 | None:intergenic | 35.0% |
| ! | CGAAATAACCTTGTTGTAGA+TGG | - | chr3.4:18119054-18119073 | None:intergenic | 35.0% |
| ! | CTCTGAAGACAAATGATAAG+AGG | - | chr3.4:18118506-18118525 | None:intergenic | 35.0% |
| ! | GAGCAAAATACGAGTAGTTT+TGG | + | chr3.4:18118826-18118845 | MS.gene93500:CDS | 35.0% |
| ! | GAGCTATCAATATGCTTTTC+AGG | - | chr3.4:18120752-18120771 | None:intergenic | 35.0% |
| ! | GCTATCAATATGCTTTTCAG+GGG | - | chr3.4:18120750-18120769 | None:intergenic | 35.0% |
| ! | GTATGGATTGACAATGTGTT+TGG | - | chr3.4:18121489-18121508 | None:intergenic | 35.0% |
| ! | TAAAGATCCAATTTTGGGCA+AGG | - | chr3.4:18119208-18119227 | None:intergenic | 35.0% |
| ! | TTGTGAATGTGATAATGAGG+AGG | + | chr3.4:18122338-18122357 | MS.gene93500:CDS | 35.0% |
| ! | TTTTGCTCCATAGCTATGTT+TGG | + | chr3.4:18121700-18121719 | MS.gene93500:intron | 35.0% |
| !! | AAAGCGTTTTGCGTTTTAAC+TGG | + | chr3.4:18120079-18120098 | MS.gene93500:intron | 35.0% |
| !! | CCTTTTGGAAACTAACATCA+TGG | - | chr3.4:18122023-18122042 | None:intergenic | 35.0% |
| !! | CTTTCATCTGGCTATTTTCA+AGG | - | chr3.4:18121981-18122000 | None:intergenic | 35.0% |
| !! | TCGTTAGTTAGTTTGGTTCT+TGG | + | chr3.4:18120262-18120281 | MS.gene93500:intron | 35.0% |
| AACGCCGGATCTGATAATTA+CGG | - | chr3.4:18120497-18120516 | None:intergenic | 40.0% | |
| AAGCTGAACTTGAGAGGTTA+GGG | + | chr3.4:18120855-18120874 | MS.gene93500:CDS | 40.0% | |
| AAGGTTCGCTTTCACATGAT+TGG | + | chr3.4:18122232-18122251 | MS.gene93500:CDS | 40.0% | |
| AATGGTCTACTAACATGCTC+GGG | - | chr3.4:18118946-18118965 | None:intergenic | 40.0% | |
| ACGTCCGTAATTATCAGATC+CGG | + | chr3.4:18120490-18120509 | MS.gene93500:intron | 40.0% | |
| ACGTGTGATCATTCCTTCAA+TGG | + | chr3.4:18120704-18120723 | MS.gene93500:CDS | 40.0% | |
| AGTGTGACAATGGGTGTTAA+TGG | + | chr3.4:18121751-18121770 | MS.gene93500:intron | 40.0% | |
| ATACGATTTCGCGACAATGT+TGG | + | chr3.4:18122272-18122291 | MS.gene93500:CDS | 40.0% | |
| ATCAATTTGGCAGGAAACTC+AGG | - | chr3.4:18118871-18118890 | None:intergenic | 40.0% | |
| ATCATGCTGCAACTGAAATC+AGG | - | chr3.4:18121211-18121230 | None:intergenic | 40.0% | |
| ATGCGACTTCTGTTACAATC+AGG | + | chr3.4:18119585-18119604 | MS.gene93500:intron | 40.0% | |
| ATTTCGCGACAATGTTGGAA+GGG | + | chr3.4:18122277-18122296 | MS.gene93500:CDS | 40.0% | |
| CAATGTGTTTGGCAGAATCA+CGG | - | chr3.4:18121478-18121497 | None:intergenic | 40.0% | |
| CAATGTGTTTGGCAGAATCT+CGG | - | chr3.4:18121380-18121399 | None:intergenic | 40.0% | |
| CCCTTAATTCTCAACCTATC+AGG | + | chr3.4:18122105-18122124 | MS.gene93500:CDS | 40.0% | |
| CCGAAGACTTGTATAGTTAC+CGG | - | chr3.4:18120954-18120973 | None:intergenic | 40.0% | |
| CCGGTAACTATACAAGTCTT+CGG | + | chr3.4:18120951-18120970 | MS.gene93500:intron | 40.0% | |
| CTATCATGAATGATGGCTGA+TGG | - | chr3.4:18122201-18122220 | None:intergenic | 40.0% | |
| CTTTGGTCCCTAAATGTTTG+AGG | - | chr3.4:18120384-18120403 | None:intergenic | 40.0% | |
| GAAATCAGGAAGAATGGATG+TGG | - | chr3.4:18121197-18121216 | None:intergenic | 40.0% | |
| GAGATGTGGCTTCTTATAGA+GGG | + | chr3.4:18118680-18118699 | MS.gene93500:CDS | 40.0% | |
| GCAAAATCTGCTACAAACTC+CGG | - | chr3.4:18121799-18121818 | None:intergenic | 40.0% | |
| GCAACTGAAATCAGGAAGAA+TGG | - | chr3.4:18121203-18121222 | None:intergenic | 40.0% | |
| GTATGCACTGTCTTGACTAA+TGG | + | chr3.4:18121029-18121048 | MS.gene93500:intron | 40.0% | |
| GTCGTCACTATCATGAATGA+TGG | - | chr3.4:18122208-18122227 | None:intergenic | 40.0% | |
| GTTGAAGCAGAATGAGAACT+TGG | + | chr3.4:18120598-18120617 | MS.gene93500:CDS | 40.0% | |
| TATGCTTACCTCAACAAGCT+CGG | - | chr3.4:18120918-18120937 | None:intergenic | 40.0% | |
| TCAGTCTTGGGATTTCTCTT+GGG | + | chr3.4:18120522-18120541 | MS.gene93500:CDS | 40.0% | |
| TCTTCCTGCAAACTATGCAA+AGG | - | chr3.4:18121425-18121444 | None:intergenic | 40.0% | |
| TGGATAGGAATCAATTTGGC+AGG | - | chr3.4:18118880-18118899 | None:intergenic | 40.0% | |
| TGTGTTGAGAGTAACACTGT+TGG | + | chr3.4:18119528-18119547 | MS.gene93500:intron | 40.0% | |
| TTCAGTCTTGGGATTTCTCT+TGG | + | chr3.4:18120521-18120540 | MS.gene93500:CDS | 40.0% | |
| TTGGAGCTTCAACAAAAGCA+AGG | - | chr3.4:18121294-18121313 | None:intergenic | 40.0% | |
| ! | AACTTTAAGGATGGTGCAGA+TGG | + | chr3.4:18118799-18118818 | MS.gene93500:CDS | 40.0% |
| ! | AGTTTGATCAGTGCATTGAC+TGG | + | chr3.4:18119114-18119133 | MS.gene93500:CDS | 40.0% |
| ! | ATAGGTTGAGAATTAAGGGC+TGG | - | chr3.4:18122104-18122123 | None:intergenic | 40.0% |
| ! | CATGATAGTGACGACAAAGA+AGG | + | chr3.4:18122213-18122232 | MS.gene93500:CDS | 40.0% |
| ! | GTTGTAGATGGTGATGAAAG+AGG | - | chr3.4:18119042-18119061 | None:intergenic | 40.0% |
| ! | TAGGTTGAGAATTAAGGGCT+GGG | - | chr3.4:18122103-18122122 | None:intergenic | 40.0% |
| ! | TGAATGTGATAATGAGGAGG+TGG | + | chr3.4:18122341-18122360 | MS.gene93500:CDS | 40.0% |
| ! | TGTGCTCTTGATAGTCAGTT+TGG | + | chr3.4:18120223-18120242 | MS.gene93500:intron | 40.0% |
| ! | TTTGCATAGTTTGCAGGAAG+AGG | + | chr3.4:18121424-18121443 | MS.gene93500:intron | 40.0% |
| ! | TTTGTAGCAGATTTTGCGCA+AGG | + | chr3.4:18121802-18121821 | MS.gene93500:CDS | 40.0% |
| ! | TTTTGAATTGCAGTCCGCAA+CGG | - | chr3.4:18119486-18119505 | None:intergenic | 40.0% |
| ! | TTTTGTGTCCGAAAGAGTTG+TGG | - | chr3.4:18118900-18118919 | None:intergenic | 40.0% |
| !! | CATGTTTGGGTTGGTGAATT+TGG | + | chr3.4:18121242-18121261 | MS.gene93500:intron | 40.0% |
| !! | GAAATTATCCGAGCTTGTTG+AGG | + | chr3.4:18120907-18120926 | MS.gene93500:CDS | 40.0% |
| !! | TACCTGCATTTCTAGTAGCA+GGG | + | chr3.4:18119613-18119632 | MS.gene93500:intron | 40.0% |
| !!! | ACGAGTAGTTTTGGCAATCA+TGG | + | chr3.4:18118835-18118854 | MS.gene93500:CDS | 40.0% |
| !!! | CGAGTAGTTTTGGCAATCAT+GGG | + | chr3.4:18118836-18118855 | MS.gene93500:CDS | 40.0% |
| !!! | TCTTGGTTACTTTTGCTCAC+AGG | + | chr3.4:18119976-18119995 | MS.gene93500:intron | 40.0% |
| AAAAGCAAGGTGGCACAATG+TGG | - | chr3.4:18121281-18121300 | None:intergenic | 45.0% | |
| AGCTTGAAGCTGAACTTGAG+AGG | + | chr3.4:18120849-18120868 | MS.gene93500:CDS | 45.0% | |
| AGGTGGAGAGGCTATTGATA+AGG | + | chr3.4:18122358-18122377 | MS.gene93500:CDS | 45.0% | |
| ATGCAGCTCCTTACCATTGA+AGG | - | chr3.4:18120720-18120739 | None:intergenic | 45.0% | |
| ATTCTCTGATGCGAGTTCCT+TGG | + | chr3.4:18118642-18118661 | MS.gene93500:CDS | 45.0% | |
| CATTCAGTGCATGTTTGGGT+TGG | + | chr3.4:18121233-18121252 | MS.gene93500:intron | 45.0% | |
| CGAGATTCTGCCAAACACAT+TGG | + | chr3.4:18121378-18121397 | MS.gene93500:intron | 45.0% | |
| CTTCAAGAGCTTCACCTGAT+AGG | - | chr3.4:18122122-18122141 | None:intergenic | 45.0% | |
| GAAGCTGAACTTGAGAGGTT+AGG | + | chr3.4:18120854-18120873 | MS.gene93500:CDS | 45.0% | |
| GAGCTTCAACAAAAGCAAGG+TGG | - | chr3.4:18121291-18121310 | None:intergenic | 45.0% | |
| GATTTCGCGACAATGTTGGA+AGG | + | chr3.4:18122276-18122295 | MS.gene93500:CDS | 45.0% | |
| GCTCGGATAATTTCCTATCC+AGG | - | chr3.4:18120901-18120920 | None:intergenic | 45.0% | |
| GGAGATGTGGCTTCTTATAG+AGG | + | chr3.4:18118679-18118698 | MS.gene93500:CDS | 45.0% | |
| GGTGCAAAGCTAATTCTGAC+TGG | + | chr3.4:18119654-18119673 | MS.gene93500:intron | 45.0% | |
| GTTCCTTCCTTGCCCAAAAT+TGG | + | chr3.4:18119198-18119217 | MS.gene93500:CDS | 45.0% | |
| TCCTGCAAACTATGCAAAGG+TGG | - | chr3.4:18121422-18121441 | None:intergenic | 45.0% | |
| TGAACTTGAGAGGTTAGGGT+TGG | + | chr3.4:18120859-18120878 | MS.gene93500:CDS | 45.0% | |
| TGCAGTTGCACTCTCTGTTA+AGG | - | chr3.4:18121134-18121153 | None:intergenic | 45.0% | |
| TGTCCGAAAGAGTTGTGGAT+AGG | - | chr3.4:18118895-18118914 | None:intergenic | 45.0% | |
| ! | AACAGAGAGTGCAACTGCAA+AGG | + | chr3.4:18121135-18121154 | MS.gene93500:intron | 45.0% |
| ! | ACTGCATAGTTTGCAGGAAG+AGG | - | chr3.4:18121877-18121896 | None:intergenic | 45.0% |
| ! | ATAGTTTGCAGGAAGAGGTG+TGG | + | chr3.4:18121429-18121448 | MS.gene93500:intron | 45.0% |
| ! | ATAGTTTGCAGGAAGAGGTG+TGG | - | chr3.4:18121448-18121429 | None:intergenic | 45.0% |
| ! | CTTTCACTCGTGTTTCGAGT+TGG | - | chr3.4:18121945-18121964 | None:intergenic | 45.0% |
| ! | CTTTTCCCTTTTCACGTCTC+CGG | - | chr3.4:18118588-18118607 | None:intergenic | 45.0% |
| ! | GATCCAATTTTGGGCAAGGA+AGG | - | chr3.4:18119204-18119223 | None:intergenic | 45.0% |
| ! | GGTGAAACTGCATAGTTTGC+AGG | - | chr3.4:18121883-18121902 | None:intergenic | 45.0% |
| ! | TAGGGGGAGAAGATTCCTTT+TGG | - | chr3.4:18122038-18122057 | None:intergenic | 45.0% |
| ! | TTTTCCCTTTTCACGTCTCC+GGG | - | chr3.4:18118587-18118606 | None:intergenic | 45.0% |
| !! | CAGTGCATTGACTGGAAGTA+AGG | + | chr3.4:18119122-18119141 | MS.gene93500:CDS | 45.0% |
| !! | CTACCTGCATTTCTAGTAGC+AGG | + | chr3.4:18119612-18119631 | MS.gene93500:intron | 45.0% |
| !!! | GGATTTTTAGGTCTCCGCAA+CGG | - | chr3.4:18119442-18119461 | None:intergenic | 45.0% |
| AAGGAATCTTCTCCCCCTAG+AGG | + | chr3.4:18122039-18122058 | MS.gene93500:CDS | 50.0% | |
| AGCTTTGCACCTGCTATTGC+AGG | - | chr3.4:18119645-18119664 | None:intergenic | 50.0% | |
| AGGTGAGTTTCGAGCTGACA+CGG | + | chr3.4:18121822-18121841 | MS.gene93500:CDS | 50.0% | |
| CACCCTGCTACTAGAAATGC+AGG | - | chr3.4:18119618-18119637 | None:intergenic | 50.0% | |
| CCAAGACTGAAGAGAAACGC+CGG | - | chr3.4:18120512-18120531 | None:intergenic | 50.0% | |
| CGGCGTTTCTCTTCAGTCTT+GGG | + | chr3.4:18120510-18120529 | MS.gene93500:CDS | 50.0% | |
| GAAGCCACATCTCCTGTTGA+AGG | - | chr3.4:18118673-18118692 | None:intergenic | 50.0% | |
| GCTGGAAAATGAGGCTAACG+CGG | + | chr3.4:18119408-18119427 | MS.gene93500:intron | 50.0% | |
| GGTTGTTTGCGGGAGGTTAA+GGG | - | chr3.4:18118565-18118584 | None:intergenic | 50.0% | |
| GTTGTTTGCGGGAGGTTAAG+GGG | - | chr3.4:18118564-18118583 | None:intergenic | 50.0% | |
| TAAGGGGCTGCTAAAGGACT+CGG | - | chr3.4:18118548-18118567 | None:intergenic | 50.0% | |
| TCCTGTTGAAGGACCATCCA+AGG | - | chr3.4:18118662-18118681 | None:intergenic | 50.0% | |
| TCCTTGGATGGTCCTTCAAC+AGG | + | chr3.4:18118658-18118677 | MS.gene93500:CDS | 50.0% | |
| TCTGATGCGAGTTCCTTGGA+TGG | + | chr3.4:18118646-18118665 | MS.gene93500:CDS | 50.0% | |
| TGAATGCGTCAAGCCTGGAT+AGG | + | chr3.4:18120885-18120904 | MS.gene93500:CDS | 50.0% | |
| TGGTCCTTCAACAGGAGATG+TGG | + | chr3.4:18118666-18118685 | MS.gene93500:CDS | 50.0% | |
| ! | AGGAAGAGGTGTGGTGACAT+TGG | - | chr3.4:18121863-18121882 | None:intergenic | 50.0% |
| ! | GACTATCAAGAGCACATGCG+AGG | - | chr3.4:18120219-18120238 | None:intergenic | 50.0% |
| ! | GCCACCTTTGCATAGTTTGC+AGG | + | chr3.4:18121418-18121437 | MS.gene93500:intron | 50.0% |
| ! | GTGATAATGAGGAGGTGGAG+AGG | + | chr3.4:18122346-18122365 | MS.gene93500:CDS | 50.0% |
| ! | TTTCCCTTTTCACGTCTCCG+GGG | - | chr3.4:18118586-18118605 | None:intergenic | 50.0% |
| !! | CAGTTGATGGACGAAGTCGA+AGG | + | chr3.4:18119256-18119275 | MS.gene93500:CDS | 50.0% |
| !! | CTGCATTTCTAGTAGCAGGG+TGG | + | chr3.4:18119616-18119635 | MS.gene93500:intron | 50.0% |
| !!! | TGGCTTGCAGCTGCTTTTAC+TGG | + | chr3.4:18118430-18118449 | MS.gene93500:CDS | 50.0% |
| ACAACCCCGGAGACGTGAAA+AGG | + | chr3.4:18118579-18118598 | MS.gene93500:CDS | 55.0% | |
| CAACCCCGGAGACGTGAAAA+GGG | + | chr3.4:18118580-18118599 | MS.gene93500:CDS | 55.0% | |
| CCGGCGTTTCTCTTCAGTCT+TGG | + | chr3.4:18120509-18120528 | MS.gene93500:CDS | 55.0% | |
| GGACATGAATGCGTCAAGCC+TGG | + | chr3.4:18120880-18120899 | MS.gene93500:CDS | 55.0% | |
| GGAGGTTAAGGGGCTGCTAA+AGG | - | chr3.4:18118554-18118573 | None:intergenic | 55.0% | |
| GGGTTGTTTGCGGGAGGTTA+AGG | - | chr3.4:18118566-18118585 | None:intergenic | 55.0% | |
| TAACCTCCCGCAAACAACCC+CGG | + | chr3.4:18118566-18118585 | MS.gene93500:CDS | 55.0% | |
| TGCAACTGCGATTGCCGTTG+CGG | + | chr3.4:18119469-18119488 | MS.gene93500:intron | 55.0% | |
| TTTCGAGCTGACACGGCTAG+TGG | + | chr3.4:18121829-18121848 | MS.gene93500:CDS | 55.0% | |
| ! | AGGAAGAGGTGTGGTACTCG+CGG | + | chr3.4:18121438-18121457 | MS.gene93500:intron | 55.0% |
| !!! | GCAGCTGCTTTTACTGGAGC+TGG | + | chr3.4:18118436-18118455 | MS.gene93500:CDS | 55.0% |
| ACGTCTCCGGGGTTGTTTGC+GGG | - | chr3.4:18118575-18118594 | None:intergenic | 60.0% | |
| CACGTCTCCGGGGTTGTTTG+CGG | - | chr3.4:18118576-18118595 | None:intergenic | 60.0% | |
| GGGTGGTGACCTGCAATAGC+AGG | + | chr3.4:18119633-18119652 | MS.gene93500:intron | 60.0% | |
| ! | GGAAGAGGTGTGGTACTCGC+GGG | + | chr3.4:18121439-18121458 | MS.gene93500:intron | 60.0% |
| ACGCGGTTGCGATGCCGTTG+CGG | + | chr3.4:18119425-18119444 | MS.gene93500:intron | 65.0% | |
| TCTCCGGGGTTGTTTGCGGG+AGG | - | chr3.4:18118572-18118591 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.4 | gene | 18118421 | 18122473 | 18118421 | ID=MS.gene93500 |
| chr3.4 | mRNA | 18118421 | 18122473 | 18118421 | ID=MS.gene93500.t1;Parent=MS.gene93500 |
| chr3.4 | exon | 18118421 | 18119324 | 18118421 | ID=MS.gene93500.t1.exon1;Parent=MS.gene93500.t1 |
| chr3.4 | CDS | 18118421 | 18119324 | 18118421 | ID=cds.MS.gene93500.t1;Parent=MS.gene93500.t1 |
| chr3.4 | exon | 18120507 | 18120928 | 18120507 | ID=MS.gene93500.t1.exon2;Parent=MS.gene93500.t1 |
| chr3.4 | CDS | 18120507 | 18120928 | 18120507 | ID=cds.MS.gene93500.t1;Parent=MS.gene93500.t1 |
| chr3.4 | exon | 18121790 | 18122473 | 18121790 | ID=MS.gene93500.t1.exon3;Parent=MS.gene93500.t1 |
| chr3.4 | CDS | 18121790 | 18122473 | 18121790 | ID=cds.MS.gene93500.t1;Parent=MS.gene93500.t1 |
| Gene Sequence |
| Protein sequence |
