Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene064521.t1 | XP_003616291.1 | 93.3 | 988 | 64 | 1 | 1 | 988 | 1 | 986 | 0.00E+00 | 1640.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene064521.t1 | Q0WNW4 | 31.7 | 971 | 350 | 25 | 1 | 966 | 1 | 663 | 4.0e-62 | 241.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene064521.t1 | G7K1Q1 | 93.3 | 988 | 64 | 1 | 1 | 988 | 1 | 986 | 0.0e+00 | 1640.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049142 | MS.gene064521 | 0.8305 | 2.84E-55 | -1.69E-46 |
| MS.gene049350 | MS.gene064521 | 0.821628 | 3.65E-53 | -1.69E-46 |
| MS.gene049418 | MS.gene064521 | 0.8283 | 9.71E-55 | -1.69E-46 |
| MS.gene049711 | MS.gene064521 | 0.829199 | 5.88E-55 | -1.69E-46 |
| MS.gene049807 | MS.gene064521 | 0.806708 | 7.22E-50 | -1.69E-46 |
| MS.gene049824 | MS.gene064521 | 0.813784 | 2.15E-51 | -1.69E-46 |
| MS.gene049850 | MS.gene064521 | 0.809925 | 1.49E-50 | -1.69E-46 |
| MS.gene049887 | MS.gene064521 | 0.81051 | 1.11E-50 | -1.69E-46 |
| MS.gene050551 | MS.gene064521 | 0.8148 | 1.28E-51 | -1.69E-46 |
| MS.gene050657 | MS.gene064521 | 0.812153 | 4.89E-51 | -1.69E-46 |
| MS.gene051018 | MS.gene064521 | 0.83741 | 5.29E-57 | -1.69E-46 |
| MS.gene051021 | MS.gene064521 | 0.82859 | 8.26E-55 | -1.69E-46 |
| MS.gene051247 | MS.gene064521 | 0.81138 | 7.21E-51 | -1.69E-46 |
| MS.gene051279 | MS.gene064521 | 0.833069 | 6.59E-56 | -1.69E-46 |
| MS.gene051388 | MS.gene064521 | 0.849983 | 2.28E-60 | -1.69E-46 |
| MS.gene05150 | MS.gene064521 | 0.803675 | 3.11E-49 | -1.69E-46 |
| MS.gene05157 | MS.gene064521 | 0.828577 | 8.32E-55 | -1.69E-46 |
| MS.gene051664 | MS.gene064521 | 0.820609 | 6.27E-53 | -1.69E-46 |
| MS.gene051700 | MS.gene064521 | 0.831807 | 1.35E-55 | -1.69E-46 |
| MS.gene051719 | MS.gene064521 | 0.837756 | 4.31E-57 | -1.69E-46 |
| MS.gene051720 | MS.gene064521 | 0.859291 | 4.58E-63 | -1.69E-46 |
| MS.gene051744 | MS.gene064521 | 0.828437 | 8.99E-55 | -1.69E-46 |
| MS.gene052516 | MS.gene064521 | 0.83115 | 1.96E-55 | -1.69E-46 |
| MS.gene052665 | MS.gene064521 | 0.813884 | 2.04E-51 | -1.69E-46 |
| MS.gene052732 | MS.gene064521 | 0.85247 | 4.52E-61 | -1.69E-46 |
| MS.gene053122 | MS.gene064521 | 0.816733 | 4.75E-52 | -1.69E-46 |
| MS.gene053144 | MS.gene064521 | 0.881661 | 1.99E-70 | -1.69E-46 |
| MS.gene053174 | MS.gene064521 | 0.804169 | 2.46E-49 | -1.69E-46 |
| MS.gene053226 | MS.gene064521 | 0.831282 | 1.82E-55 | -1.69E-46 |
| MS.gene053536 | MS.gene064521 | 0.818949 | 1.50E-52 | -1.69E-46 |
| MS.gene053538 | MS.gene064521 | 0.814939 | 1.19E-51 | -1.69E-46 |
| MS.gene053581 | MS.gene064521 | 0.805354 | 1.39E-49 | -1.69E-46 |
| MS.gene053599 | MS.gene064521 | 0.806632 | 7.49E-50 | -1.69E-46 |
| MS.gene054550 | MS.gene064521 | 0.809212 | 2.12E-50 | -1.69E-46 |
| MS.gene054584 | MS.gene064521 | 0.890111 | 1.32E-73 | -1.69E-46 |
| MS.gene054651 | MS.gene064521 | 0.809362 | 1.96E-50 | -1.69E-46 |
| MS.gene054775 | MS.gene064521 | 0.802395 | 5.73E-49 | -1.69E-46 |
| MS.gene055083 | MS.gene064521 | 0.804789 | 1.82E-49 | -1.69E-46 |
| MS.gene055465 | MS.gene064521 | 0.872341 | 3.43E-67 | -1.69E-46 |
| MS.gene055466 | MS.gene064521 | 0.870578 | 1.31E-66 | -1.69E-46 |
| MS.gene055467 | MS.gene064521 | 0.800291 | 1.54E-48 | -1.69E-46 |
| MS.gene055468 | MS.gene064521 | 0.859473 | 4.04E-63 | -1.69E-46 |
| MS.gene055469 | MS.gene064521 | 0.863222 | 2.90E-64 | -1.69E-46 |
| MS.gene055513 | MS.gene064521 | 0.821641 | 3.62E-53 | -1.69E-46 |
| MS.gene055537 | MS.gene064521 | 0.885315 | 9.04E-72 | -1.69E-46 |
| MS.gene055580 | MS.gene064521 | -0.872068 | 4.22E-67 | -1.69E-46 |
| MS.gene055764 | MS.gene064521 | 0.804851 | 1.77E-49 | -1.69E-46 |
| MS.gene055890 | MS.gene064521 | 0.801244 | 9.87E-49 | -1.69E-46 |
| MS.gene055891 | MS.gene064521 | 0.820768 | 5.76E-53 | -1.69E-46 |
| MS.gene056005 | MS.gene064521 | 0.802343 | 5.87E-49 | -1.69E-46 |
| MS.gene056043 | MS.gene064521 | -0.854221 | 1.42E-61 | -1.69E-46 |
| MS.gene056050 | MS.gene064521 | 0.810795 | 9.65E-51 | -1.69E-46 |
| MS.gene056308 | MS.gene064521 | 0.841748 | 3.94E-58 | -1.69E-46 |
| MS.gene056507 | MS.gene064521 | 0.818593 | 1.81E-52 | -1.69E-46 |
| MS.gene057082 | MS.gene064521 | 0.810408 | 1.17E-50 | -1.69E-46 |
| MS.gene057294 | MS.gene064521 | 0.816886 | 4.39E-52 | -1.69E-46 |
| MS.gene057915 | MS.gene064521 | 0.820166 | 7.92E-53 | -1.69E-46 |
| MS.gene058087 | MS.gene064521 | 0.829765 | 4.29E-55 | -1.69E-46 |
| MS.gene058339 | MS.gene064521 | 0.813167 | 2.93E-51 | -1.69E-46 |
| MS.gene058625 | MS.gene064521 | 0.809723 | 1.64E-50 | -1.69E-46 |
| MS.gene058649 | MS.gene064521 | 0.808591 | 2.87E-50 | -1.69E-46 |
| MS.gene058668 | MS.gene064521 | 0.862055 | 6.64E-64 | -1.69E-46 |
| MS.gene05894 | MS.gene064521 | 0.812777 | 3.57E-51 | -1.69E-46 |
| MS.gene059424 | MS.gene064521 | 0.805151 | 1.53E-49 | -1.69E-46 |
| MS.gene059426 | MS.gene064521 | 0.843464 | 1.38E-58 | -1.69E-46 |
| MS.gene059570 | MS.gene064521 | 0.810098 | 1.36E-50 | -1.69E-46 |
| MS.gene059625 | MS.gene064521 | 0.817907 | 2.58E-52 | -1.69E-46 |
| MS.gene059725 | MS.gene064521 | 0.801309 | 9.57E-49 | -1.69E-46 |
| MS.gene059842 | MS.gene064521 | 0.800729 | 1.26E-48 | -1.69E-46 |
| MS.gene060519 | MS.gene064521 | 0.800589 | 1.34E-48 | -1.69E-46 |
| MS.gene060587 | MS.gene064521 | 0.845587 | 3.70E-59 | -1.69E-46 |
| MS.gene060637 | MS.gene064521 | 0.807791 | 4.25E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene064521.t1 | MTR_5g078300 | 96.964 | 988 | 28 | 1 | 1 | 988 | 1 | 986 | 0.0 | 1947 |
| MS.gene064521.t1 | MTR_1g070350 | 35.516 | 397 | 220 | 12 | 580 | 967 | 495 | 864 | 1.08e-39 | 159 |
| MS.gene064521.t1 | MTR_1g070350 | 48.387 | 93 | 47 | 1 | 21 | 113 | 24 | 115 | 2.94e-22 | 103 |
| MS.gene064521.t1 | MTR_7g115350 | 34.336 | 399 | 215 | 14 | 580 | 967 | 504 | 866 | 1.88e-34 | 142 |
| MS.gene064521.t1 | MTR_7g115350 | 48.485 | 99 | 50 | 1 | 15 | 113 | 20 | 117 | 2.49e-25 | 113 |
| MS.gene064521.t1 | MTR_0168s0060 | 30.481 | 187 | 111 | 5 | 1 | 169 | 1 | 186 | 1.20e-25 | 112 |
| MS.gene064521.t1 | MTR_0168s0060 | 61.616 | 99 | 38 | 0 | 619 | 717 | 331 | 429 | 6.44e-23 | 104 |
| MS.gene064521.t1 | MTR_4g107310 | 36.667 | 120 | 76 | 0 | 1 | 120 | 1 | 120 | 8.20e-25 | 110 |
| MS.gene064521.t1 | MTR_4g107310 | 48.611 | 144 | 68 | 3 | 574 | 717 | 290 | 427 | 2.72e-16 | 83.6 |
| MS.gene064521.t1 | MTR_4g011540 | 49.485 | 97 | 49 | 0 | 619 | 715 | 286 | 382 | 4.65e-16 | 82.4 |
| MS.gene064521.t1 | MTR_4g011550 | 48.352 | 91 | 47 | 0 | 626 | 716 | 281 | 371 | 8.36e-16 | 82.4 |
| MS.gene064521.t1 | MTR_1g054835 | 28.191 | 376 | 201 | 13 | 622 | 958 | 65 | 410 | 2.37e-14 | 77.4 |
| MS.gene064521.t1 | MTR_4g093150 | 37.037 | 108 | 68 | 0 | 614 | 721 | 68 | 175 | 3.18e-14 | 73.2 |
| MS.gene064521.t1 | MTR_7g107000 | 37.097 | 124 | 75 | 1 | 602 | 725 | 53 | 173 | 3.63e-14 | 76.6 |
| MS.gene064521.t1 | MTR_4g130400 | 40.952 | 105 | 62 | 0 | 619 | 723 | 6 | 110 | 3.24e-12 | 70.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene064521.t1 | AT5G16720 | 46.212 | 396 | 170 | 7 | 572 | 966 | 310 | 663 | 6.27e-87 | 293 |
| MS.gene064521.t1 | AT5G16720 | 38.214 | 280 | 117 | 10 | 1 | 259 | 1 | 245 | 3.54e-46 | 177 |
| MS.gene064521.t1 | AT1G70750 | 47.453 | 373 | 155 | 11 | 601 | 966 | 400 | 738 | 2.05e-72 | 255 |
| MS.gene064521.t1 | AT1G70750 | 53.509 | 114 | 44 | 2 | 1 | 107 | 1 | 112 | 3.29e-30 | 129 |
| MS.gene064521.t1 | AT1G08800 | 45.763 | 177 | 86 | 5 | 581 | 755 | 858 | 1026 | 5.59e-30 | 129 |
| MS.gene064521.t1 | AT1G08800 | 38.158 | 152 | 81 | 5 | 21 | 165 | 10 | 155 | 4.12e-23 | 107 |
| MS.gene064521.t1 | AT1G08800 | 45.763 | 177 | 86 | 5 | 581 | 755 | 858 | 1026 | 5.59e-30 | 129 |
| MS.gene064521.t1 | AT1G08800 | 38.158 | 152 | 81 | 5 | 21 | 165 | 10 | 155 | 4.12e-23 | 107 |
| MS.gene064521.t1 | AT1G08800 | 45.763 | 177 | 86 | 5 | 581 | 755 | 858 | 1026 | 5.59e-30 | 129 |
| MS.gene064521.t1 | AT1G08800 | 38.158 | 152 | 81 | 5 | 21 | 165 | 10 | 155 | 4.12e-23 | 107 |
| MS.gene064521.t1 | AT1G08800 | 45.763 | 177 | 86 | 5 | 581 | 755 | 858 | 1026 | 5.59e-30 | 129 |
| MS.gene064521.t1 | AT1G08800 | 38.158 | 152 | 81 | 5 | 21 | 165 | 10 | 155 | 4.12e-23 | 107 |
| MS.gene064521.t1 | AT1G74830 | 40.000 | 210 | 118 | 2 | 619 | 828 | 302 | 503 | 2.10e-26 | 115 |
| MS.gene064521.t1 | AT1G74830 | 36.283 | 113 | 72 | 0 | 1 | 113 | 20 | 132 | 6.82e-24 | 107 |
| MS.gene064521.t1 | AT1G18990 | 58.559 | 111 | 44 | 1 | 605 | 715 | 289 | 397 | 1.31e-21 | 100 |
| MS.gene064521.t1 | AT1G18990 | 31.720 | 186 | 97 | 3 | 1 | 156 | 1 | 186 | 6.36e-18 | 89.0 |
| MS.gene064521.t1 | AT2G30690 | 32.099 | 162 | 87 | 7 | 15 | 169 | 13 | 158 | 1.08e-17 | 89.0 |
| MS.gene064521.t1 | AT2G30690 | 32.099 | 162 | 87 | 7 | 15 | 169 | 13 | 158 | 1.08e-17 | 89.0 |
| MS.gene064521.t1 | AT4G13630 | 41.135 | 141 | 69 | 3 | 586 | 722 | 195 | 325 | 1.32e-17 | 88.2 |
| MS.gene064521.t1 | AT4G13630 | 41.135 | 141 | 69 | 3 | 586 | 722 | 195 | 325 | 1.32e-17 | 88.2 |
| MS.gene064521.t1 | AT5G06560 | 40.000 | 100 | 60 | 0 | 622 | 721 | 74 | 173 | 7.01e-16 | 82.4 |
| MS.gene064521.t1 | AT3G54740 | 39.604 | 101 | 61 | 0 | 625 | 725 | 77 | 177 | 2.48e-15 | 80.1 |
| MS.gene064521.t1 | AT3G54740 | 39.604 | 101 | 61 | 0 | 625 | 725 | 77 | 177 | 2.48e-15 | 80.1 |
| MS.gene064521.t1 | AT3G54740 | 39.604 | 101 | 61 | 0 | 625 | 725 | 77 | 177 | 2.48e-15 | 80.1 |
| MS.gene064521.t1 | AT3G54740 | 39.604 | 101 | 61 | 0 | 625 | 725 | 77 | 177 | 2.48e-15 | 80.1 |
| MS.gene064521.t1 | AT3G54740 | 39.604 | 101 | 61 | 0 | 625 | 725 | 29 | 129 | 2.99e-15 | 79.3 |
| MS.gene064521.t1 | AT3G54740 | 39.604 | 101 | 61 | 0 | 625 | 725 | 29 | 129 | 2.99e-15 | 79.3 |
| MS.gene064521.t1 | AT3G54740 | 39.604 | 101 | 61 | 0 | 625 | 725 | 29 | 129 | 2.99e-15 | 79.3 |
| MS.gene064521.t1 | AT3G54740 | 39.604 | 101 | 61 | 0 | 625 | 725 | 29 | 129 | 2.99e-15 | 79.3 |
| MS.gene064521.t1 | AT1G04890 | 42.969 | 128 | 70 | 2 | 591 | 716 | 82 | 208 | 3.50e-14 | 76.3 |
| MS.gene064521.t1 | AT4G13160 | 47.872 | 94 | 49 | 0 | 622 | 715 | 117 | 210 | 1.82e-13 | 72.4 |
Find 131 sgRNAs with CRISPR-Local
Find 167 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTATCTGTTGAAGCCTTCT+TGG | 0.160198 | 5.2:+66435946 | MS.gene064521:CDS |
| GTGAAAATTGCTTGGCTTCT+AGG | 0.206836 | 5.2:+66435772 | MS.gene064521:CDS |
| CTTGTTCTTCCATCATTCTT+TGG | 0.217588 | 5.2:-66438170 | None:intergenic |
| AAGCAACCAATTGTTCTTCT+TGG | 0.220911 | 5.2:-66438702 | None:intergenic |
| ACAAAATTTGCCAAATGTTT+TGG | 0.233461 | 5.2:+66435585 | MS.gene064521:CDS |
| ACAGATAAGGAGGGTAAATT+TGG | 0.246430 | 5.2:-66435932 | None:intergenic |
| TGTTTACCTTGTGCATTATC+TGG | 0.252484 | 5.2:-66436677 | None:intergenic |
| TCTGCTGACCTAGGAGTTTC+AGG | 0.253809 | 5.2:-66437859 | None:intergenic |
| ATCCGACAATGACAGAAATT+TGG | 0.280174 | 5.2:+66436994 | MS.gene064521:CDS |
| CAGAAATTTGGAAGCAGATA+TGG | 0.283479 | 5.2:+66437006 | MS.gene064521:CDS |
| TTCTCTGCTTCATCTAAATA+TGG | 0.289720 | 5.2:-66438741 | None:intergenic |
| CAATGTGAAACCTGCATAAT+AGG | 0.290320 | 5.2:-66436275 | None:intergenic |
| ATAGAATCTATTAGCTTAAC+AGG | 0.302400 | 5.2:-66436371 | None:intergenic |
| CATGAGAAACATGATGAAAA+TGG | 0.306053 | 5.2:+66435864 | MS.gene064521:CDS |
| GATGGAGCTTGAAGAAAGTT+TGG | 0.320863 | 5.2:+66436556 | MS.gene064521:CDS |
| AGAATTTCTCCAACATTGTA+TGG | 0.334868 | 5.2:+66438935 | MS.gene064521:CDS |
| ATCACTTGAAATCATCAATA+TGG | 0.336778 | 5.2:+66436307 | MS.gene064521:CDS |
| AGAGGAAGTATTGATCAAAA+TGG | 0.367658 | 5.2:+66436508 | MS.gene064521:CDS |
| TAGTGTATGCATTTCTTGAA+TGG | 0.368218 | 5.2:+66435514 | MS.gene064521:CDS |
| AGAAGGAATTGGAAGAGTAT+AGG | 0.372537 | 5.2:+66438268 | MS.gene064521:CDS |
| TGATGATACCGTTTCTAACT+TGG | 0.372874 | 5.2:+66438461 | MS.gene064521:CDS |
| CTATCCATTTCACTTATCAT+AGG | 0.373876 | 5.2:-66438843 | None:intergenic |
| GAAGGAATTGGAAGAGTATA+GGG | 0.377022 | 5.2:+66438269 | MS.gene064521:CDS |
| AGAGGAAAAGATAATTTCAT+TGG | 0.377885 | 5.2:+66438587 | MS.gene064521:CDS |
| TGAATTACGCCTTAAGAACT+TGG | 0.379118 | 5.2:+66439037 | MS.gene064521:CDS |
| GCAAGAACTTGAGAAGGAAT+TGG | 0.385367 | 5.2:+66438257 | MS.gene064521:CDS |
| CACAAAGAAGACTATTCTAA+TGG | 0.388166 | 5.2:+66438657 | MS.gene064521:CDS |
| AAAATGGAGAGAGTTTAAAT+AGG | 0.391672 | 5.2:+66435880 | MS.gene064521:CDS |
| GTAGTTCAAATTTCTGTGAA+TGG | 0.392563 | 5.2:+66436623 | MS.gene064521:CDS |
| CATGAAACTGAAAACTCATT+TGG | 0.392989 | 5.2:+66435804 | MS.gene064521:CDS |
| AGATCAACTCAAAGCATTAG+AGG | 0.392996 | 5.2:+66438569 | MS.gene064521:CDS |
| GATCATTGTCCAAGTTCTTA+AGG | 0.394095 | 5.2:-66439046 | None:intergenic |
| TTGTAATCATTGCCATTGTT+TGG | 0.398108 | 5.2:-66438101 | None:intergenic |
| TTCCAAATTTCTGTCATTGT+CGG | 0.401114 | 5.2:-66436996 | None:intergenic |
| AAACTTGAACTCTGATGAAA+AGG | 0.403932 | 5.2:+66436181 | MS.gene064521:CDS |
| TGTATGGGATCCATACAAAA+TGG | 0.406925 | 5.2:+66438951 | MS.gene064521:CDS |
| TTCTGATGCTCCTATTATGC+AGG | 0.413743 | 5.2:+66436265 | MS.gene064521:CDS |
| CTCTTTGAGAAAACAGAATC+AGG | 0.416556 | 5.2:+66437913 | MS.gene064521:CDS |
| AGTTCCTATGATAAGTGAAA+TGG | 0.425926 | 5.2:+66438839 | MS.gene064521:CDS |
| TCTATATCTTTAGAAGTTGA+AGG | 0.427647 | 5.2:+66436584 | MS.gene064521:CDS |
| AAGAAGAACAATTGGTTGCT+TGG | 0.429766 | 5.2:+66438704 | MS.gene064521:CDS |
| ACGCTTGATTGCGGTTCAAT+CGG | 0.430956 | 5.2:-66436479 | None:intergenic |
| ATTTGCATTTGATAGAGAAT+TGG | 0.437319 | 5.2:+66438782 | MS.gene064521:CDS |
| TATTAACCGTTCAACGTCAA+TGG | 0.441249 | 5.2:-66436348 | None:intergenic |
| GTTAGAAACGGTATCATCAT+TGG | 0.443026 | 5.2:-66438457 | None:intergenic |
| TGCACACAAGAAGATGAATC+TGG | 0.444733 | 5.2:+66436887 | MS.gene064521:CDS |
| TAGTACTTTAGAAGAATTTG+AGG | 0.444834 | 5.2:+66438527 | MS.gene064521:CDS |
| CAGTGTAAATGATAATGAAA+TGG | 0.445770 | 5.2:+66437741 | MS.gene064521:CDS |
| AGCCGGTCGATTGTTAAAAC+CGG | 0.449648 | 5.2:-66437988 | None:intergenic |
| TGAGGATCTAGAGGAGGAGA+AGG | 0.452240 | 5.2:+66436427 | MS.gene064521:CDS |
| TTGAAGCCTTCTTGGTATGA+TGG | 0.459164 | 5.2:+66435954 | MS.gene064521:CDS |
| TGGTTTAAGACCAAAACATT+TGG | 0.460628 | 5.2:-66435595 | None:intergenic |
| TTCACCAAGCAAAGACTTGT+AGG | 0.462618 | 5.2:+66439091 | MS.gene064521:CDS |
| CAATCTCCAAGAAGAACAAT+TGG | 0.464940 | 5.2:+66438696 | MS.gene064521:CDS |
| AAGATAATTTCATTGGAAGA+TGG | 0.470072 | 5.2:+66438594 | MS.gene064521:CDS |
| CGGTTCAATCGGTGACTCAC+TGG | 0.470776 | 5.2:-66436468 | None:intergenic |
| TGAATCATGCAAATTGAATG+AGG | 0.474317 | 5.2:+66436409 | MS.gene064521:CDS |
| GATGAGAGTTCATCAAGATA+TGG | 0.474936 | 5.2:+66438630 | MS.gene064521:CDS |
| AGCACTGAGAGCTCTTTGTT+CGG | 0.478445 | 5.2:-66438028 | None:intergenic |
| TATGCCTACAAGTCTTTGCT+TGG | 0.481502 | 5.2:-66439095 | None:intergenic |
| AACTGAACTCGATCGATCCT+CGG | 0.488164 | 5.2:-66436156 | None:intergenic |
| CAAGAAGGCTTCAACAGATA+AGG | 0.490047 | 5.2:-66435945 | None:intergenic |
| ACTCATTTGGTATGAGACAT+AGG | 0.495233 | 5.2:+66435817 | MS.gene064521:CDS |
| AGAAGAACATGATCATGATC+AGG | 0.495368 | 5.2:+66436067 | MS.gene064521:CDS |
| TACAAGGCTGCAGGAAGAAA+AGG | 0.495890 | 5.2:+66438119 | MS.gene064521:CDS |
| TGAATGCAACTTAACTATAG+TGG | 0.498253 | 5.2:-66439072 | None:intergenic |
| GAGTAGGTTGGTTCTTCAGA+TGG | 0.507610 | 5.2:-66437469 | None:intergenic |
| ATGTTGAGAAGAATGAAAGA+TGG | 0.509499 | 5.2:+66438330 | MS.gene064521:CDS |
| ATAAACTTCCTGAAACTCCT+AGG | 0.514133 | 5.2:+66437851 | MS.gene064521:CDS |
| TCTTGTTCTTGTTGCAACAC+CGG | 0.514596 | 5.2:+66438375 | MS.gene064521:CDS |
| GGCAATGATTACAAGGCTGC+AGG | 0.518083 | 5.2:+66438110 | MS.gene064521:CDS |
| AGGTTGATCGCGTTTATGAC+AGG | 0.518142 | 5.2:+66438889 | MS.gene064521:CDS |
| TGATACCGTTTCTAACTTGG+AGG | 0.518834 | 5.2:+66438464 | MS.gene064521:CDS |
| ATACAAAATGGTGGTGATGA+AGG | 0.519176 | 5.2:+66438963 | MS.gene064521:CDS |
| TGCATTATCTGGTTCTTCTG+TGG | 0.527662 | 5.2:-66436666 | None:intergenic |
| TGACAGTTCATCGGTGTAGC+CGG | 0.531224 | 5.2:-66438394 | None:intergenic |
| AGAAAAGGCGGCAATGCAGA+TGG | 0.535335 | 5.2:+66438134 | MS.gene064521:CDS |
| CATTTCATTATCATTTACAC+TGG | 0.540128 | 5.2:-66437740 | None:intergenic |
| CCATCAATCATCAAAATGCT+CGG | 0.540613 | 5.2:+66437807 | MS.gene064521:CDS |
| CTATATCTTTAGAAGTTGAA+GGG | 0.544204 | 5.2:+66436585 | MS.gene064521:CDS |
| GTATGGATCCCATACAATGT+TGG | 0.545411 | 5.2:-66438944 | None:intergenic |
| TGCAGAGAAAACAAACATGA+TGG | 0.549690 | 5.2:+66436538 | MS.gene064521:CDS |
| AGAGAAGCAAGAACTTGAGA+AGG | 0.550787 | 5.2:+66438251 | MS.gene064521:CDS |
| GAAAGTGTGTATTGAAGAAG+AGG | 0.550976 | 5.2:+66438869 | MS.gene064521:CDS |
| TCAATAGAAGATGACAAAGA+AGG | 0.551727 | 5.2:+66436011 | MS.gene064521:CDS |
| AAATGGTGGTGATGAAGGAA+AGG | 0.555471 | 5.2:+66438968 | MS.gene064521:CDS |
| GGATGGTAGCGTTGCAAGTG+AGG | 0.560662 | 5.2:+66437951 | MS.gene064521:CDS |
| ATTGAATTTGAGATAAACAA+TGG | 0.561453 | 5.2:+66436044 | MS.gene064521:CDS |
| GATGGAAACTATTTAAGCAA+AGG | 0.562706 | 5.2:+66435972 | MS.gene064521:CDS |
| TATTCTCAGAGAGGTGGCCG+AGG | 0.563232 | 5.2:+66436139 | MS.gene064521:CDS |
| ATTACAATACCAAAGAATGA+TGG | 0.564697 | 5.2:+66438161 | MS.gene064521:CDS |
| GAATTTCTCCAACATTGTAT+GGG | 0.568122 | 5.2:+66438936 | MS.gene064521:CDS |
| ACAAAGCCATTGACGTTGAA+CGG | 0.568420 | 5.2:+66436342 | MS.gene064521:CDS |
| ATAAAATCATCAACAGCACT+TGG | 0.569946 | 5.2:-66436233 | None:intergenic |
| TTTGGTATGAGACATAGGAT+TGG | 0.570047 | 5.2:+66435822 | MS.gene064521:CDS |
| TGAGGTAGAATACAGCGATC+CGG | 0.570543 | 5.2:+66437969 | MS.gene064521:CDS |
| TATCTCCTCCAAGTTAGAAA+CGG | 0.572085 | 5.2:-66438469 | None:intergenic |
| TAGTTTCCATCATACCAAGA+AGG | 0.574251 | 5.2:-66435960 | None:intergenic |
| TGCAACTTAACTATAGTGGA+TGG | 0.575938 | 5.2:-66439068 | None:intergenic |
| TAGCATGTGTGAAAATTGCT+TGG | 0.580838 | 5.2:+66435764 | MS.gene064521:CDS |
| CAAATTGAATGAGGATCTAG+AGG | 0.582974 | 5.2:+66436418 | MS.gene064521:CDS |
| TGACATGCATTGACTTGAGT+AGG | 0.583561 | 5.2:-66437485 | None:intergenic |
| GCAGCTGAGATTTCAAACCT+TGG | 0.585082 | 5.2:+66435705 | MS.gene064521:CDS |
| GAAGGCTTCAACAGATAAGG+AGG | 0.588495 | 5.2:-66435942 | None:intergenic |
| GCAATCAAGCGTCTTAGAAG+AGG | 0.588801 | 5.2:+66436490 | MS.gene064521:CDS |
| AAACAATGGCAATGATTACA+AGG | 0.589570 | 5.2:+66438103 | MS.gene064521:CDS |
| ACTTGCAACGCTACCATCCA+CGG | 0.593320 | 5.2:-66437947 | None:intergenic |
| TGATCATGATCAGGATGAAG+AGG | 0.593848 | 5.2:+66436076 | MS.gene064521:CDS |
| TTGGTTAGTAGCTATTGCTG+AGG | 0.595521 | 5.2:-66438082 | None:intergenic |
| ATGCATTGACTTGAGTAGGT+TGG | 0.596080 | 5.2:-66437481 | None:intergenic |
| GTTGGTGTTTCTATGTAACA+TGG | 0.600046 | 5.2:-66435475 | None:intergenic |
| AAGATCAACTGACAGTTCAT+CGG | 0.602771 | 5.2:-66438403 | None:intergenic |
| GATGATTAGAGCAGTAGCCA+AGG | 0.602881 | 5.2:-66435722 | None:intergenic |
| TCTTCTAAGACGCTTGATTG+CGG | 0.606157 | 5.2:-66436488 | None:intergenic |
| TAGGTTGGTTCTTCAGATGG+AGG | 0.608490 | 5.2:-66437466 | None:intergenic |
| TGCATTGCATCTGCTGACCT+AGG | 0.622751 | 5.2:-66437868 | None:intergenic |
| TGTTTCTCATGACTTAACCA+TGG | 0.628154 | 5.2:-66435852 | None:intergenic |
| GGAGCAGAAGAATCCGTGGA+TGG | 0.629443 | 5.2:+66437934 | MS.gene064521:CDS |
| ATGCAATGCACTACATGCAG+AGG | 0.632820 | 5.2:+66437881 | MS.gene064521:CDS |
| ATCAGGAGCAGAAGAATCCG+TGG | 0.633581 | 5.2:+66437930 | MS.gene064521:CDS |
| AATAGCTACTAACCAAACAA+TGG | 0.642191 | 5.2:+66438089 | MS.gene064521:CDS |
| ATCTTCTTCAAGTGACAGTG+AGG | 0.656914 | 5.2:+66437516 | MS.gene064521:CDS |
| TGGATCAAGTGATGATGATG+AGG | 0.658998 | 5.2:+66436907 | MS.gene064521:CDS |
| ATTGAATGAGGATCTAGAGG+AGG | 0.663122 | 5.2:+66436421 | MS.gene064521:CDS |
| GAACAAGAAAATGCTCCACC+AGG | 0.665638 | 5.2:+66437031 | MS.gene064521:CDS |
| AAGGCTTCAACAGATAAGGA+GGG | 0.667591 | 5.2:-66435941 | None:intergenic |
| AAGGCTGCAGGAAGAAAAGG+CGG | 0.674245 | 5.2:+66438122 | MS.gene064521:CDS |
| AGCCTTGAACAGAAAAGACA+AGG | 0.674692 | 5.2:-66435618 | None:intergenic |
| GAAGAACCAGATAATGCACA+AGG | 0.705101 | 5.2:+66436671 | MS.gene064521:CDS |
| CTTGAACAGAAAAGACAAGG+TGG | 0.722462 | 5.2:-66435615 | None:intergenic |
| ATGGGATCCATACAAAATGG+TGG | 0.735054 | 5.2:+66438954 | MS.gene064521:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AGTTTAGATAGATTGAAAAA+AGG | - | chr5.2:66437686-66437705 | None:intergenic | 20.0% |
| !! | GAATGATCATATTAGATATA+TGG | + | chr5.2:66436787-66436806 | MS.gene064521:intron | 20.0% |
| !! | TTATGAAATTTGCAAATTCT+TGG | + | chr5.2:66436813-66436832 | MS.gene064521:intron | 20.0% |
| !!! | ATTGAATTTGAGATAAACAA+TGG | + | chr5.2:66436044-66436063 | MS.gene064521:CDS | 20.0% |
| !!! | TAGAATTACAACTATTTTGT+TGG | - | chr5.2:66435496-66435515 | None:intergenic | 20.0% |
| ! | AAAATGGAGAGAGTTTAAAT+AGG | + | chr5.2:66435880-66435899 | MS.gene064521:CDS | 25.0% |
| ! | AAGATAATTTCATTGGAAGA+TGG | + | chr5.2:66438594-66438613 | MS.gene064521:CDS | 25.0% |
| ! | AATAAACTGAAAACAGTCTA+TGG | - | chr5.2:66437237-66437256 | None:intergenic | 25.0% |
| ! | AATATCAGCTGAAAAAATTG+AGG | + | chr5.2:66437774-66437793 | MS.gene064521:CDS | 25.0% |
| ! | AGAGGAAAAGATAATTTCAT+TGG | + | chr5.2:66438587-66438606 | MS.gene064521:CDS | 25.0% |
| ! | ATCACTTGAAATCATCAATA+TGG | + | chr5.2:66436307-66436326 | MS.gene064521:CDS | 25.0% |
| ! | ATTACAATACCAAAGAATGA+TGG | + | chr5.2:66438161-66438180 | MS.gene064521:CDS | 25.0% |
| ! | ATTTGCATTTGATAGAGAAT+TGG | + | chr5.2:66438782-66438801 | MS.gene064521:CDS | 25.0% |
| ! | CATGAATTATTAATACCGTT+TGG | - | chr5.2:66437416-66437435 | None:intergenic | 25.0% |
| ! | CATTTCATTATCATTTACAC+TGG | - | chr5.2:66437743-66437762 | None:intergenic | 25.0% |
| ! | CTTAATTTATCACACATGTT+TGG | + | chr5.2:66437139-66437158 | MS.gene064521:intron | 25.0% |
| ! | GTACTAGATATAAAAACTCA+CGG | - | chr5.2:66437594-66437613 | None:intergenic | 25.0% |
| ! | TGATCATATTAGATATATGG+TGG | + | chr5.2:66436790-66436809 | MS.gene064521:intron | 25.0% |
| !! | ACAAAATTTGCCAAATGTTT+TGG | + | chr5.2:66435585-66435604 | MS.gene064521:CDS | 25.0% |
| !! | ATAGAATCTATTAGCTTAAC+AGG | - | chr5.2:66436374-66436393 | None:intergenic | 25.0% |
| !! | CAGTGTAAATGATAATGAAA+TGG | + | chr5.2:66437741-66437760 | MS.gene064521:CDS | 25.0% |
| !! | CTATATCTTTAGAAGTTGAA+GGG | + | chr5.2:66436585-66436604 | MS.gene064521:CDS | 25.0% |
| !! | TAGTACTTTAGAAGAATTTG+AGG | + | chr5.2:66438527-66438546 | MS.gene064521:CDS | 25.0% |
| !! | TCTATATCTTTAGAAGTTGA+AGG | + | chr5.2:66436584-66436603 | MS.gene064521:CDS | 25.0% |
| !! | TTTTCAGTTTCATGATGATT+TGG | - | chr5.2:66435798-66435817 | None:intergenic | 25.0% |
| !!! | ATCATTTACACTGGTTTTAT+CGG | - | chr5.2:66437734-66437753 | None:intergenic | 25.0% |
| !!! | CTGAGAAATGAATTTTTCAA+AGG | - | chr5.2:66436948-66436967 | None:intergenic | 25.0% |
| !!! | GTTGTTTTCATAAACTATTC+TGG | - | chr5.2:66437272-66437291 | None:intergenic | 25.0% |
| AAACAATGGCAATGATTACA+AGG | + | chr5.2:66438103-66438122 | MS.gene064521:CDS | 30.0% | |
| AAACTTGAACTCTGATGAAA+AGG | + | chr5.2:66436181-66436200 | MS.gene064521:CDS | 30.0% | |
| AACAGAAACATGTTATGCAA+AGG | - | chr5.2:66436767-66436786 | None:intergenic | 30.0% | |
| AATAGCTACTAACCAAACAA+TGG | + | chr5.2:66438089-66438108 | MS.gene064521:CDS | 30.0% | |
| AATTCAGATGTTCATCCAAA+CGG | + | chr5.2:66437398-66437417 | MS.gene064521:intron | 30.0% | |
| AGAATTTCTCCAACATTGTA+TGG | + | chr5.2:66438935-66438954 | MS.gene064521:CDS | 30.0% | |
| AGAGTATAGGGAAAAAGTTA+TGG | + | chr5.2:66438281-66438300 | MS.gene064521:CDS | 30.0% | |
| AGTTCCTATGATAAGTGAAA+TGG | + | chr5.2:66438839-66438858 | MS.gene064521:CDS | 30.0% | |
| ATAAAATCATCAACAGCACT+TGG | - | chr5.2:66436236-66436255 | None:intergenic | 30.0% | |
| ATGTTGAGAAGAATGAAAGA+TGG | + | chr5.2:66438330-66438349 | MS.gene064521:CDS | 30.0% | |
| CACAAAGAAGACTATTCTAA+TGG | + | chr5.2:66438657-66438676 | MS.gene064521:CDS | 30.0% | |
| CATGAAACTGAAAACTCATT+TGG | + | chr5.2:66435804-66435823 | MS.gene064521:CDS | 30.0% | |
| CATGAGAAACATGATGAAAA+TGG | + | chr5.2:66435864-66435883 | MS.gene064521:CDS | 30.0% | |
| CTATCCATTTCACTTATCAT+AGG | - | chr5.2:66438846-66438865 | None:intergenic | 30.0% | |
| GAATTTCTCCAACATTGTAT+GGG | + | chr5.2:66438936-66438955 | MS.gene064521:CDS | 30.0% | |
| GATGGAAACTATTTAAGCAA+AGG | + | chr5.2:66435972-66435991 | MS.gene064521:CDS | 30.0% | |
| GTAGTTCAAATTTCTGTGAA+TGG | + | chr5.2:66436623-66436642 | MS.gene064521:CDS | 30.0% | |
| TAGTGTATGCATTTCTTGAA+TGG | + | chr5.2:66435514-66435533 | MS.gene064521:CDS | 30.0% | |
| TCAATAGAAGATGACAAAGA+AGG | + | chr5.2:66436011-66436030 | MS.gene064521:CDS | 30.0% | |
| TGAATCATGCAAATTGAATG+AGG | + | chr5.2:66436409-66436428 | MS.gene064521:CDS | 30.0% | |
| TGAATGCAACTTAACTATAG+TGG | - | chr5.2:66439075-66439094 | None:intergenic | 30.0% | |
| TTCCAAATTTCTGTCATTGT+CGG | - | chr5.2:66436999-66437018 | None:intergenic | 30.0% | |
| TTCTCTGCTTCATCTAAATA+TGG | - | chr5.2:66438744-66438763 | None:intergenic | 30.0% | |
| TTGTAATCATTGCCATTGTT+TGG | - | chr5.2:66438104-66438123 | None:intergenic | 30.0% | |
| TTTATCACACATGTTTGGAT+CGG | + | chr5.2:66437144-66437163 | MS.gene064521:intron | 30.0% | |
| ! | TGCTTGATGTATAGAGTTTT+TGG | + | chr5.2:66436705-66436724 | MS.gene064521:intron | 30.0% |
| ! | TGGTTTAAGACCAAAACATT+TGG | - | chr5.2:66435598-66435617 | None:intergenic | 30.0% |
| ! | TTCAGCTGATATTGTTTTCT+CGG | - | chr5.2:66437767-66437786 | None:intergenic | 30.0% |
| !! | AGAGGAAGTATTGATCAAAA+TGG | + | chr5.2:66436508-66436527 | MS.gene064521:CDS | 30.0% |
| !!! | ATAGGATTGGTTTTATTCCA+TGG | + | chr5.2:66435835-66435854 | MS.gene064521:CDS | 30.0% |
| !!! | TGAAAGTTTTATTCTCAGAG+AGG | + | chr5.2:66436130-66436149 | MS.gene064521:CDS | 30.0% |
| AAGAAGAACAATTGGTTGCT+TGG | + | chr5.2:66438704-66438723 | MS.gene064521:CDS | 35.0% | |
| AAGATCAACTGACAGTTCAT+CGG | - | chr5.2:66438406-66438425 | None:intergenic | 35.0% | |
| AAGCAACCAATTGTTCTTCT+TGG | - | chr5.2:66438705-66438724 | None:intergenic | 35.0% | |
| ACAGATAAGGAGGGTAAATT+TGG | - | chr5.2:66435935-66435954 | None:intergenic | 35.0% | |
| ACTCATTTGGTATGAGACAT+AGG | + | chr5.2:66435817-66435836 | MS.gene064521:CDS | 35.0% | |
| AGAAGAACATGATCATGATC+AGG | + | chr5.2:66436067-66436086 | MS.gene064521:CDS | 35.0% | |
| AGAATTGAGTGCTTCACAAT+TGG | - | chr5.2:66437644-66437663 | None:intergenic | 35.0% | |
| ATAAACTTCCTGAAACTCCT+AGG | + | chr5.2:66437851-66437870 | MS.gene064521:CDS | 35.0% | |
| ATCAGCTGAAAAAATTGAGG+AGG | + | chr5.2:66437777-66437796 | MS.gene064521:CDS | 35.0% | |
| ATCCGACAATGACAGAAATT+TGG | + | chr5.2:66436994-66437013 | MS.gene064521:CDS | 35.0% | |
| CAAATTGAATGAGGATCTAG+AGG | + | chr5.2:66436418-66436437 | MS.gene064521:CDS | 35.0% | |
| CAATCTCCAAGAAGAACAAT+TGG | + | chr5.2:66438696-66438715 | MS.gene064521:CDS | 35.0% | |
| CAATGTGAAACCTGCATAAT+AGG | - | chr5.2:66436278-66436297 | None:intergenic | 35.0% | |
| CAGAAATTTGGAAGCAGATA+TGG | + | chr5.2:66437006-66437025 | MS.gene064521:CDS | 35.0% | |
| CCATCAATCATCAAAATGCT+CGG | + | chr5.2:66437807-66437826 | MS.gene064521:CDS | 35.0% | |
| CTTGTTCTTCCATCATTCTT+TGG | - | chr5.2:66438173-66438192 | None:intergenic | 35.0% | |
| GATCATTGTCCAAGTTCTTA+AGG | - | chr5.2:66439049-66439068 | None:intergenic | 35.0% | |
| GATGAGAGTTCATCAAGATA+TGG | + | chr5.2:66438630-66438649 | MS.gene064521:CDS | 35.0% | |
| GTTAGAAACGGTATCATCAT+TGG | - | chr5.2:66438460-66438479 | None:intergenic | 35.0% | |
| TAGCATGTGTGAAAATTGCT+TGG | + | chr5.2:66435764-66435783 | MS.gene064521:CDS | 35.0% | |
| TAGTTTCCATCATACCAAGA+AGG | - | chr5.2:66435963-66435982 | None:intergenic | 35.0% | |
| TATCTCCTCCAAGTTAGAAA+CGG | - | chr5.2:66438472-66438491 | None:intergenic | 35.0% | |
| TATTAACCGTTCAACGTCAA+TGG | - | chr5.2:66436351-66436370 | None:intergenic | 35.0% | |
| TGAATTACGCCTTAAGAACT+TGG | + | chr5.2:66439037-66439056 | MS.gene064521:CDS | 35.0% | |
| TGATGATACCGTTTCTAACT+TGG | + | chr5.2:66438461-66438480 | MS.gene064521:CDS | 35.0% | |
| TGCAGAGAAAACAAACATGA+TGG | + | chr5.2:66436538-66436557 | MS.gene064521:CDS | 35.0% | |
| TGTATGGGATCCATACAAAA+TGG | + | chr5.2:66438951-66438970 | MS.gene064521:CDS | 35.0% | |
| TGTTTACCTTGTGCATTATC+TGG | - | chr5.2:66436680-66436699 | None:intergenic | 35.0% | |
| TGTTTCTCATGACTTAACCA+TGG | - | chr5.2:66435855-66435874 | None:intergenic | 35.0% | |
| TTATGCAAAGGAAAGATCGA+TGG | - | chr5.2:66436755-66436774 | None:intergenic | 35.0% | |
| TTTGGTATGAGACATAGGAT+TGG | + | chr5.2:66435822-66435841 | MS.gene064521:CDS | 35.0% | |
| ! | AGAAGGAATTGGAAGAGTAT+AGG | + | chr5.2:66438268-66438287 | MS.gene064521:CDS | 35.0% |
| ! | AGATCAACTCAAAGCATTAG+AGG | + | chr5.2:66438569-66438588 | MS.gene064521:CDS | 35.0% |
| ! | ATACAAAATGGTGGTGATGA+AGG | + | chr5.2:66438963-66438982 | MS.gene064521:CDS | 35.0% |
| ! | CTCTTTGAGAAAACAGAATC+AGG | + | chr5.2:66437913-66437932 | MS.gene064521:CDS | 35.0% |
| ! | GAAAGTGTGTATTGAAGAAG+AGG | + | chr5.2:66438869-66438888 | MS.gene064521:CDS | 35.0% |
| ! | GAAGGAATTGGAAGAGTATA+GGG | + | chr5.2:66438269-66438288 | MS.gene064521:CDS | 35.0% |
| ! | GTTGGTGTTTCTATGTAACA+TGG | - | chr5.2:66435478-66435497 | None:intergenic | 35.0% |
| ! | TGCAACTTAACTATAGTGGA+TGG | - | chr5.2:66439071-66439090 | None:intergenic | 35.0% |
| ! | TTCATCACCACCATTTTGTA+TGG | - | chr5.2:66438964-66438983 | None:intergenic | 35.0% |
| !!! | AAGTTTTATTCTCAGAGAGG+TGG | + | chr5.2:66436133-66436152 | MS.gene064521:CDS | 35.0% |
| AAGGCTTCAACAGATAAGGA+GGG | - | chr5.2:66435944-66435963 | None:intergenic | 40.0% | |
| ACAAAGCCATTGACGTTGAA+CGG | + | chr5.2:66436342-66436361 | MS.gene064521:CDS | 40.0% | |
| AGAGAAGCAAGAACTTGAGA+AGG | + | chr5.2:66438251-66438270 | MS.gene064521:CDS | 40.0% | |
| AGCCTTGAACAGAAAAGACA+AGG | - | chr5.2:66435621-66435640 | None:intergenic | 40.0% | |
| ATCTTCTTCAAGTGACAGTG+AGG | + | chr5.2:66437516-66437535 | MS.gene064521:CDS | 40.0% | |
| ATGGGATCCATACAAAATGG+TGG | + | chr5.2:66438954-66438973 | MS.gene064521:CDS | 40.0% | |
| ATTGAATGAGGATCTAGAGG+AGG | + | chr5.2:66436421-66436440 | MS.gene064521:CDS | 40.0% | |
| CAAGAAGGCTTCAACAGATA+AGG | - | chr5.2:66435948-66435967 | None:intergenic | 40.0% | |
| CTTATCTGTTGAAGCCTTCT+TGG | + | chr5.2:66435946-66435965 | MS.gene064521:CDS | 40.0% | |
| CTTGAACAGAAAAGACAAGG+TGG | - | chr5.2:66435618-66435637 | None:intergenic | 40.0% | |
| GAAGAACCAGATAATGCACA+AGG | + | chr5.2:66436671-66436690 | MS.gene064521:CDS | 40.0% | |
| GAGTGCTTCACAATTGGATA+TGG | - | chr5.2:66437638-66437657 | None:intergenic | 40.0% | |
| GATGGAGCTTGAAGAAAGTT+TGG | + | chr5.2:66436556-66436575 | MS.gene064521:CDS | 40.0% | |
| GCAAGAACTTGAGAAGGAAT+TGG | + | chr5.2:66438257-66438276 | MS.gene064521:CDS | 40.0% | |
| GGATGCAGAAAAAGATGAGA+AGG | + | chr5.2:66436202-66436221 | MS.gene064521:CDS | 40.0% | |
| GTATGGATCCCATACAATGT+TGG | - | chr5.2:66438947-66438966 | None:intergenic | 40.0% | |
| GTGAAAATTGCTTGGCTTCT+AGG | + | chr5.2:66435772-66435791 | MS.gene064521:CDS | 40.0% | |
| TCTTGTTCTTGTTGCAACAC+CGG | + | chr5.2:66438375-66438394 | MS.gene064521:CDS | 40.0% | |
| TGATACCGTTTCTAACTTGG+AGG | + | chr5.2:66438464-66438483 | MS.gene064521:CDS | 40.0% | |
| TGATCATGATCAGGATGAAG+AGG | + | chr5.2:66436076-66436095 | MS.gene064521:CDS | 40.0% | |
| TGCACACAAGAAGATGAATC+TGG | + | chr5.2:66436887-66436906 | MS.gene064521:CDS | 40.0% | |
| TTCTGATGCTCCTATTATGC+AGG | + | chr5.2:66436265-66436284 | MS.gene064521:CDS | 40.0% | |
| TTGAAGCCTTCTTGGTATGA+TGG | + | chr5.2:66435954-66435973 | MS.gene064521:CDS | 40.0% | |
| TTGGTTAGTAGCTATTGCTG+AGG | - | chr5.2:66438085-66438104 | None:intergenic | 40.0% | |
| ! | AAATGGTGGTGATGAAGGAA+AGG | + | chr5.2:66438968-66438987 | MS.gene064521:CDS | 40.0% |
| ! | AGCTCTTTGTTCGGCTTTTA+GGG | - | chr5.2:66438022-66438041 | None:intergenic | 40.0% |
| ! | CACCTTGTCTTTTCTGTTCA+AGG | + | chr5.2:66435616-66435635 | MS.gene064521:CDS | 40.0% |
| ! | TGGATCAAGTGATGATGATG+AGG | + | chr5.2:66436907-66436926 | MS.gene064521:CDS | 40.0% |
| !! | ATCCGGTTTTAACAATCGAC+CGG | + | chr5.2:66437986-66438005 | MS.gene064521:CDS | 40.0% |
| !! | ATGCATTGACTTGAGTAGGT+TGG | - | chr5.2:66437484-66437503 | None:intergenic | 40.0% |
| !! | CCGAGCATTTTGATGATTGA+TGG | - | chr5.2:66437810-66437829 | None:intergenic | 40.0% |
| !! | CTTTTAGGGATGCTTTTAGC+CGG | - | chr5.2:66438008-66438027 | None:intergenic | 40.0% |
| !! | TCTTCTAAGACGCTTGATTG+CGG | - | chr5.2:66436491-66436510 | None:intergenic | 40.0% |
| !! | TGACATGCATTGACTTGAGT+AGG | - | chr5.2:66437488-66437507 | None:intergenic | 40.0% |
| !! | TGCATTATCTGGTTCTTCTG+TGG | - | chr5.2:66436669-66436688 | None:intergenic | 40.0% |
| AACTGAACTCGATCGATCCT+CGG | - | chr5.2:66436159-66436178 | None:intergenic | 45.0% | |
| ACGCTTGATTGCGGTTCAAT+CGG | - | chr5.2:66436482-66436501 | None:intergenic | 45.0% | |
| AGCCGGTCGATTGTTAAAAC+CGG | - | chr5.2:66437991-66438010 | None:intergenic | 45.0% | |
| ATGCAATGCACTACATGCAG+AGG | + | chr5.2:66437881-66437900 | MS.gene064521:CDS | 45.0% | |
| GAACAAGAAAATGCTCCACC+AGG | + | chr5.2:66437031-66437050 | MS.gene064521:CDS | 45.0% | |
| GAAGGCTTCAACAGATAAGG+AGG | - | chr5.2:66435945-66435964 | None:intergenic | 45.0% | |
| GATGATTAGAGCAGTAGCCA+AGG | - | chr5.2:66435725-66435744 | None:intergenic | 45.0% | |
| GCAATCAAGCGTCTTAGAAG+AGG | + | chr5.2:66436490-66436509 | MS.gene064521:CDS | 45.0% | |
| GCAGCTGAGATTTCAAACCT+TGG | + | chr5.2:66435705-66435724 | MS.gene064521:CDS | 45.0% | |
| TACAAGGCTGCAGGAAGAAA+AGG | + | chr5.2:66438119-66438138 | MS.gene064521:CDS | 45.0% | |
| TGAGGTAGAATACAGCGATC+CGG | + | chr5.2:66437969-66437988 | MS.gene064521:CDS | 45.0% | |
| ! | AGCACTGAGAGCTCTTTGTT+CGG | - | chr5.2:66438031-66438050 | None:intergenic | 45.0% |
| ! | AGGTTGATCGCGTTTATGAC+AGG | + | chr5.2:66438889-66438908 | MS.gene064521:CDS | 45.0% |
| ! | GAGCTCTTTGTTCGGCTTTT+AGG | - | chr5.2:66438023-66438042 | None:intergenic | 45.0% |
| !! | GAGTAGGTTGGTTCTTCAGA+TGG | - | chr5.2:66437472-66437491 | None:intergenic | 45.0% |
| !! | TAGGTTGGTTCTTCAGATGG+AGG | - | chr5.2:66437469-66437488 | None:intergenic | 45.0% |
| AAGGCTGCAGGAAGAAAAGG+CGG | + | chr5.2:66438122-66438141 | MS.gene064521:CDS | 50.0% | |
| ACTTGCAACGCTACCATCCA+CGG | - | chr5.2:66437950-66437969 | None:intergenic | 50.0% | |
| AGAAAAGGCGGCAATGCAGA+TGG | + | chr5.2:66438134-66438153 | MS.gene064521:CDS | 50.0% | |
| ATCAGGAGCAGAAGAATCCG+TGG | + | chr5.2:66437930-66437949 | MS.gene064521:CDS | 50.0% | |
| CCAGGTACAAAGACAGTGCA+TGG | + | chr5.2:66437049-66437068 | MS.gene064521:intron | 50.0% | |
| CCATGCACTGTCTTTGTACC+TGG | - | chr5.2:66437052-66437071 | None:intergenic | 50.0% | |
| GGCAATGATTACAAGGCTGC+AGG | + | chr5.2:66438110-66438129 | MS.gene064521:CDS | 50.0% | |
| TCTGCTGACCTAGGAGTTTC+AGG | - | chr5.2:66437862-66437881 | None:intergenic | 50.0% | |
| TGACAGTTCATCGGTGTAGC+CGG | - | chr5.2:66438397-66438416 | None:intergenic | 50.0% | |
| TGAGGATCTAGAGGAGGAGA+AGG | + | chr5.2:66436427-66436446 | MS.gene064521:CDS | 50.0% | |
| TGCACTGTCTTTGTACCTGG+TGG | - | chr5.2:66437049-66437068 | None:intergenic | 50.0% | |
| TGCATTGCATCTGCTGACCT+AGG | - | chr5.2:66437871-66437890 | None:intergenic | 50.0% | |
| CGGTTCAATCGGTGACTCAC+TGG | - | chr5.2:66436471-66436490 | None:intergenic | 55.0% | |
| GGAGCAGAAGAATCCGTGGA+TGG | + | chr5.2:66437934-66437953 | MS.gene064521:CDS | 55.0% | |
| TATTCTCAGAGAGGTGGCCG+AGG | + | chr5.2:66436139-66436158 | MS.gene064521:CDS | 55.0% | |
| ! | GGATGGTAGCGTTGCAAGTG+AGG | + | chr5.2:66437951-66437970 | MS.gene064521:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.2 | gene | 66435453 | 66439112 | 66435453 | ID=MS.gene064521 |
| chr5.2 | mRNA | 66435453 | 66439112 | 66435453 | ID=MS.gene064521.t1;Parent=MS.gene064521 |
| chr5.2 | exon | 66435453 | 66436692 | 66435453 | ID=MS.gene064521.t1.exon1;Parent=MS.gene064521.t1 |
| chr5.2 | CDS | 66435453 | 66436692 | 66435453 | ID=cds.MS.gene064521.t1;Parent=MS.gene064521.t1 |
| chr5.2 | exon | 66436846 | 66437052 | 66436846 | ID=MS.gene064521.t1.exon2;Parent=MS.gene064521.t1 |
| chr5.2 | CDS | 66436846 | 66437052 | 66436846 | ID=cds.MS.gene064521.t1;Parent=MS.gene064521.t1 |
| chr5.2 | exon | 66437458 | 66437592 | 66437458 | ID=MS.gene064521.t1.exon3;Parent=MS.gene064521.t1 |
| chr5.2 | CDS | 66437458 | 66437592 | 66437458 | ID=cds.MS.gene064521.t1;Parent=MS.gene064521.t1 |
| chr5.2 | exon | 66437728 | 66439112 | 66437728 | ID=MS.gene064521.t1.exon4;Parent=MS.gene064521.t1 |
| chr5.2 | CDS | 66437728 | 66439112 | 66437728 | ID=cds.MS.gene064521.t1;Parent=MS.gene064521.t1 |
| Gene Sequence |
| Protein sequence |
