AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene068010


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene068010.t1 MTR_4g093510 75.142 527 116 4 1 522 1 517 0.0 750
MS.gene068010.t1 MTR_4g093280 62.928 526 135 6 1 523 1 469 0.0 631
MS.gene068010.t1 MTR_4g093260 57.692 546 170 13 1 519 1 512 0.0 559
MS.gene068010.t1 MTR_4g093260 57.525 299 100 8 173 464 284 562 5.44e-88 285
MS.gene068010.t1 MTR_4g093260 60.993 141 50 4 156 293 392 530 2.34e-38 149
MS.gene068010.t1 MTR_4g093260 56.227 546 169 14 1 519 1 503 0.0 533
MS.gene068010.t1 MTR_4g093260 57.525 299 100 8 173 464 275 553 8.23e-88 284
MS.gene068010.t1 MTR_4g093260 60.993 141 50 4 156 293 383 521 3.00e-38 149
MS.gene068010.t1 MTR_4g093270 65.965 285 92 3 20 303 17 297 6.22e-132 387
MS.gene068010.t1 MTR_4g093270 57.241 145 57 2 275 416 137 279 1.72e-41 152
MS.gene068010.t1 MTR_4g093260 52.477 444 150 14 103 519 1 410 3.20e-123 373
MS.gene068010.t1 MTR_4g093260 57.525 299 100 8 173 464 182 460 3.96e-88 282
MS.gene068010.t1 MTR_4g093260 60.993 141 50 4 156 293 290 428 4.42e-38 147
MS.gene068010.t1 MTR_4g108350 39.726 146 80 2 6 146 11 153 2.19e-29 114
MS.gene068010.t1 MTR_5g039530 36.420 162 93 3 18 169 20 181 7.81e-25 102
MS.gene068010.t1 MTR_4g108350 40.984 122 64 2 30 146 26 144 3.90e-24 99.4
MS.gene068010.t1 MTR_5g091800 33.083 133 81 2 20 146 17 147 5.35e-18 81.6
MS.gene068010.t1 MTR_3g452470 31.111 135 82 3 20 146 17 148 1.53e-17 80.5
MS.gene068010.t1 MTR_8g096670 36.170 94 57 1 14 107 1 91 6.11e-17 76.6
MS.gene068010.t1 MTR_8g096670 36.170 94 57 1 14 107 11 101 1.14e-14 70.5
MS.gene068010.t1 MTR_3g099010 34.375 96 63 0 14 109 11 106 6.93e-13 67.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene068010.t1 AT1G74520 39.610 154 85 2 6 154 8 158 8.47e-30 115
MS.gene068010.t1 AT1G74520 39.610 154 85 2 6 154 8 158 8.47e-30 115
MS.gene068010.t1 AT1G69700 40.881 159 86 4 18 168 22 180 1.24e-26 107
MS.gene068010.t1 AT5G62490 35.526 152 90 3 6 154 8 154 3.56e-21 91.3
MS.gene068010.t1 AT5G50720 36.190 105 60 1 10 107 7 111 5.90e-16 74.7
MS.gene068010.t1 AT2G42820 38.272 81 50 0 20 100 17 97 8.23e-16 75.5
MS.gene068010.t1 AT4G24960 35.632 87 56 0 14 100 11 97 2.25e-14 70.5
MS.gene068010.t1 AT4G24960 36.364 77 49 0 24 100 2 78 1.95e-12 65.1

Find 105 sgRNAs with CRISPR-Local

Find 321 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATTCCCGTCATGCCTAAAAT+TGG 0.216519 4.3:+21033252 MS.gene068010:CDS
ACAGACACTACATATTAATT+TGG 0.222530 4.3:-21034554 None:intergenic
CTCTGTGTTTCCTCCCATTA+AGG 0.223084 4.3:-21034282 None:intergenic
GACTTGAATTCCCACCTTAA+TGG 0.248092 4.3:+21034268 MS.gene068010:CDS
TTATATCTTTGTGCTCAATT+TGG 0.251358 4.3:-21032118 None:intergenic
AATGTGGCCTCTCACTTAAA+TGG 0.266617 4.3:+21034601 MS.gene068010:CDS
CGTGACTACTTGCGGTTTCA+TGG 0.271686 4.3:-21031574 None:intergenic
TAGCTGATTCACCTCTTCTT+TGG 0.281772 4.3:-21034371 None:intergenic
TTCTTCATGGTTTCTCAAAC+TGG 0.286518 4.3:+21030292 MS.gene068010:CDS
CATACCATGCAAAATGATAA+AGG 0.301623 4.3:-21030325 None:intergenic
ATCCTTACTTGCTTAGTTGC+AGG 0.301812 4.3:-21033729 None:intergenic
GCACAAAGATATAAAAGATT+TGG 0.315985 4.3:+21032127 MS.gene068010:CDS
ACTTGAATTCCCACCTTAAT+GGG 0.327925 4.3:+21034269 MS.gene068010:CDS
GAACAAAGGCATCAAAGATT+TGG 0.329175 4.3:+21033683 MS.gene068010:CDS
GTTAATCTCTGCTGTTCCTT+TGG 0.330433 4.3:-21033310 None:intergenic
CACATAGCTGTTTACCTTGT+TGG 0.332650 4.3:-21031709 None:intergenic
TGATGCCTTTGTTCTCTGTT+TGG 0.337446 4.3:-21033674 None:intergenic
AGAAGCGACAAATGAAATTA+TGG 0.343558 4.3:+21031920 MS.gene068010:CDS
CCAAGGATTTGATCTCATAT+TGG 0.353877 4.3:+21030644 MS.gene068010:CDS
TTGATAGATTAAATAACCTT+AGG 0.356567 4.3:+21034656 MS.gene068010:CDS
GGTAGTAAATGGCTTCTTCA+TGG 0.362420 4.3:+21030279 None:intergenic
TTAAGCTAATGATCATCTTC+TGG 0.364058 4.3:+21031496 MS.gene068010:CDS
GTTGGCAATGAGTTTCTCTA+AGG 0.364553 4.3:-21031691 None:intergenic
CTTAAATGGGAAGATGCATT+TGG 0.368212 4.3:+21034615 MS.gene068010:CDS
ATATTCAAAGAGGTAAATTA+AGG 0.374191 4.3:-21030677 None:intergenic
TTTGACTTGCCACAATATTA+GGG 0.397124 4.3:-21034108 None:intergenic
TGTTCCTTTAGTTTCCACTA+TGG 0.400376 4.3:-21034143 None:intergenic
AAGTTTCTTGTGCAGACAAA+TGG 0.415016 4.3:+21033642 MS.gene068010:intron
ACAGCAGAGAGCGGCAAAGC+TGG 0.420496 4.3:+21034163 MS.gene068010:CDS
TCCACCGAGATGACAATTCA+AGG 0.440150 4.3:-21033430 None:intergenic
TGTGTAGAATTAGAACTTTG+AGG 0.444482 4.3:-21034196 None:intergenic
CTAAATTCTAATGTCAAGAA+TGG 0.444687 4.3:+21034409 MS.gene068010:CDS
GAGAAATATATGAAAGAGAA+TGG 0.445755 4.3:+21031660 MS.gene068010:CDS
TGGCTCATCATACCGGACTT+TGG 0.448937 4.3:+21031516 MS.gene068010:CDS
GTGGACTTGTGCTTTATGTT+TGG 0.459600 4.3:+21033386 MS.gene068010:CDS
ATGTGGCCTCTCACTTAAAT+GGG 0.460940 4.3:+21034602 MS.gene068010:CDS
TGAATGAAGTCTTACTTGCT+TGG 0.462071 4.3:-21032180 None:intergenic
TTGGAATTATGCATCCCAAC+AGG 0.462818 4.3:-21034535 None:intergenic
AGAACCTGTGTGAGCCTGTT+GGG 0.465854 4.3:+21034521 MS.gene068010:CDS
CCAATATGAGATCAAATCCT+TGG 0.466673 4.3:-21030644 None:intergenic
GTCAGTTTCAATTGCTTGTA+CGG 0.466858 4.3:-21030608 None:intergenic
GAGAAGATATTCTTAACAAA+GGG 0.471483 4.3:+21034431 MS.gene068010:CDS
TATTCTTAACAAAGGGTTGA+AGG 0.474250 4.3:+21034438 MS.gene068010:CDS
TTCCCGTCATGCCTAAAATT+GGG 0.474683 4.3:+21033253 MS.gene068010:CDS
AGTCTTACTTGCTTGGTAGC+AGG 0.482500 4.3:-21032173 None:intergenic
CGTGGAGGTTAAACAACTAC+TGG 0.488327 4.3:+21031595 MS.gene068010:CDS
CTTGATCTAGTGCAGACAAA+TGG 0.488996 4.3:+21032086 MS.gene068010:intron
TAATATTGTGGCAAGTCAAA+AGG 0.491507 4.3:+21034111 MS.gene068010:CDS
ACCTACACTACATAAGCAAA+AGG 0.492485 4.3:+21033497 MS.gene068010:CDS
TAAGAAGCTCGTCCAAAGTC+CGG 0.501414 4.3:-21031528 None:intergenic
CAGCATTTCTTTATTATCAG+TGG 0.501431 4.3:-21031943 None:intergenic
TGATAGATTAAATAACCTTA+GGG 0.501735 4.3:+21034657 MS.gene068010:CDS
TAAACAACTACTGGAGGAAG+TGG 0.507612 4.3:+21031604 MS.gene068010:CDS
GTGGACTTGTGCTTTATGTT+CGG 0.511128 4.3:+21034225 MS.gene068010:CDS
CATCTTCTGGCTCATCATAC+CGG 0.514317 4.3:+21031509 MS.gene068010:CDS
AACCTCCACGTGACTACTTG+CGG 0.514428 4.3:-21031582 None:intergenic
CAAAGATATAAAAGATTTGG+AGG 0.519689 4.3:+21032130 MS.gene068010:CDS
TGTGTTTCCTCCCATTAAGG+TGG 0.519720 4.3:-21034279 None:intergenic
GTTGAAGGGAACAGTGATGA+TGG 0.524742 4.3:+21034453 MS.gene068010:CDS
ATTCTTAACAAAGGGTTGAA+GGG 0.533798 4.3:+21034439 MS.gene068010:CDS
GGAGAAGATATTCTTAACAA+AGG 0.534172 4.3:+21034430 MS.gene068010:CDS
GTGACATCAGGTTTCACCTC+TGG 0.539831 4.3:+21031466 MS.gene068010:intron
CAAAGGCATCAAAGATTTGG+AGG 0.542142 4.3:+21033686 MS.gene068010:CDS
AAAGAATTTACCGTAGAAGA+AGG 0.542698 4.3:-21030711 None:intergenic
GTGTTTCCTCCCATTAAGGT+GGG 0.543534 4.3:-21034278 None:intergenic
AACAGTGATGATGGATGATA+AGG 0.544536 4.3:+21034462 MS.gene068010:CDS
AGAAGGAAGTGCAGAAAGAG+TGG 0.545798 4.3:+21033367 MS.gene068010:CDS
AAAGGCATCATCAGCCATAG+TGG 0.556655 4.3:+21034129 MS.gene068010:CDS
CCACATTGGCCTCACAATGA+AGG 0.562915 4.3:-21034585 None:intergenic
TCAGCCATAGTGGAAACTAA+AGG 0.567357 4.3:+21034139 MS.gene068010:CDS
TAGTCAGAGTTCTACACAGA+AGG 0.572374 4.3:+21033350 MS.gene068010:CDS
CATCTTCCCATTTAAGTGAG+AGG 0.572687 4.3:-21034608 None:intergenic
TGATAATAAAGAAATAGTAA+AGG 0.578556 4.3:+21033551 MS.gene068010:CDS
GCAGAGAGCGGCAAAGCTGG+TGG 0.578659 4.3:+21034166 MS.gene068010:CDS
ATGATCATTAGCTTAACGTA+TGG 0.579799 4.3:-21031489 None:intergenic
ACAGCAGAGATTAACAAAGC+TGG 0.583162 4.3:+21033318 MS.gene068010:CDS
GATAAACTACCCTAATATTG+TGG 0.583591 4.3:+21034099 MS.gene068010:intron
AAGCAGTGCAAATGTCCCTA+AGG 0.588084 4.3:-21034672 None:intergenic
TGTTCCTTTGGTTTCCACTG+TGG 0.597327 4.3:-21033298 None:intergenic
AAAACCTTGAATTGTCATCT+CGG 0.600288 4.3:+21033426 MS.gene068010:CDS
GAGCGGCAAAGCTGGTGGCA+AGG 0.601488 4.3:+21034171 MS.gene068010:CDS
TAATGTTGTCCTTCATTGTG+AGG 0.605887 4.3:+21034576 MS.gene068010:CDS
AAATTATCAGTCCAAAGAAG+AGG 0.609547 4.3:+21034360 MS.gene068010:CDS
TCATAAAAGCATATTCAAAG+AGG 0.621411 4.3:-21030687 None:intergenic
AGAGAAACTCATTGCCAACA+AGG 0.624521 4.3:+21031695 MS.gene068010:CDS
GATTAACAAAGCTGGTGGAG+AGG 0.629202 4.3:+21033326 MS.gene068010:CDS
GCAGAGATTAACAAAGCTGG+TGG 0.630126 4.3:+21033321 MS.gene068010:CDS
ATTTAAGTGAGAGGCCACAT+TGG 0.630484 4.3:-21034599 None:intergenic
AAGAACCTGTGTGAGCCTGT+TGG 0.634344 4.3:+21034520 MS.gene068010:CDS
CCTTCATTGTGAGGCCAATG+TGG 0.636527 4.3:+21034585 MS.gene068010:CDS
CTAATTCTACACAGAAAGTG+TGG 0.637216 4.3:+21034206 MS.gene068010:CDS
TATTGTAGAACACAATGTGT+AGG 0.639058 4.3:+21031889 MS.gene068010:intron
TGATAATAAAGAAATGCTGA+AGG 0.646529 4.3:+21031947 MS.gene068010:CDS
ACTAAAGGAACAGCAGAGAG+CGG 0.648424 4.3:+21034154 MS.gene068010:CDS
ACCTTGAATTGTCATCTCGG+TGG 0.650309 4.3:+21033429 MS.gene068010:CDS
TGAATTCCCACCTTAATGGG+AGG 0.653071 4.3:+21034272 MS.gene068010:CDS
TGACTCATATGCAGAAACCA+AGG 0.655333 4.3:+21030627 MS.gene068010:CDS
TCAGCCACAGTGGAAACCAA+AGG 0.672852 4.3:+21033294 MS.gene068010:CDS
GGAGGTTAAACAACTACTGG+AGG 0.674917 4.3:+21031598 MS.gene068010:CDS
GCATCCCAACAGGCTCACAC+AGG 0.678013 4.3:-21034525 None:intergenic
AAATGCGTCATCAGCCACAG+TGG 0.678240 4.3:+21033284 MS.gene068010:CDS
TGAAACCGCAAGTAGTCACG+TGG 0.686143 4.3:+21031577 MS.gene068010:CDS
AGACTCCAAACAGAGAACAA+AGG 0.692912 4.3:+21033669 MS.gene068010:CDS
TTAGCTTAACGTATGGCCAG+AGG 0.695704 4.3:-21031482 None:intergenic
AACCGCAAGTAGTCACGTGG+AGG 0.714787 4.3:+21031580 MS.gene068010:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TGATAATAAAGAAATAGTAA+AGG + chr4.3:21033551-21033570 MS.gene068010:CDS 15.0%
!! TTTCAATGAATAAAAAATCA+TGG - chr4.3:21031377-21031396 None:intergenic 15.0%
!!! TTTTTGTTTTTTTGTGATTA+TGG + chr4.3:21030566-21030585 MS.gene068010:intron 15.0%
!!! TTTTTTAAACACTAAACATT+TGG + chr4.3:21030837-21030856 MS.gene068010:intron 15.0%
!! AAATTTAAATTGTAGATTCG+TGG + chr4.3:21033972-21033991 MS.gene068010:intron 20.0%
!! ATATTCAAAGAGGTAAATTA+AGG - chr4.3:21030680-21030699 None:intergenic 20.0%
!! ATGTTTAATCAATATTTGGT+TGG + chr4.3:21033840-21033859 MS.gene068010:intron 20.0%
!! CAAATAGAAACTTAATGATT+AGG + chr4.3:21032212-21032231 MS.gene068010:intron 20.0%
!! CTAATCATTAAGTTTCTATT+TGG - chr4.3:21032214-21032233 None:intergenic 20.0%
!! GAAAAAGATGAAGAAAATAA+AGG - chr4.3:21030373-21030392 None:intergenic 20.0%
!! GAACTAAAAAATTGTATTAG+AGG - chr4.3:21032600-21032619 None:intergenic 20.0%
!! GTTAATCTCTACTAAAAATT+TGG - chr4.3:21031308-21031327 None:intergenic 20.0%
!! TAAAAAATTGTATTAGAGGA+GGG - chr4.3:21032596-21032615 None:intergenic 20.0%
!! TACAATTTAAATTTGACCTT+GGG - chr4.3:21033966-21033985 None:intergenic 20.0%
!! TACTTATTGTTGTAAAAACA+AGG - chr4.3:21030906-21030925 None:intergenic 20.0%
!! TGATAGATTAAATAACCTTA+GGG + chr4.3:21034657-21034676 MS.gene068010:CDS 20.0%
!! TGGTTTGATAAAAATCAAAA+GGG - chr4.3:21031419-21031438 None:intergenic 20.0%
!! TGTATTCTTCGAATTATATT+TGG + chr4.3:21033176-21033195 MS.gene068010:intron 20.0%
!! TGTCAAAACAATAATGTAAA+AGG - chr4.3:21030527-21030546 None:intergenic 20.0%
!! TTGATAGATTAAATAACCTT+AGG + chr4.3:21034656-21034675 MS.gene068010:CDS 20.0%
!!! AACCAAATATTGATTAAACA+TGG - chr4.3:21033841-21033860 None:intergenic 20.0%
!!! AATCATGGTTTCTTTTTTTA+TGG - chr4.3:21031362-21031381 None:intergenic 20.0%
!!! ACATTTTTAACAAAGAACTA+TGG - chr4.3:21033146-21033165 None:intergenic 20.0%
!!! ACCAAATATTGATTAAACAT+GGG - chr4.3:21033840-21033859 None:intergenic 20.0%
!!! ATATAATTGATTTCACATTC+TGG + chr4.3:21030795-21030814 MS.gene068010:intron 20.0%
!!! CTAATTGTACTTTTTATTTC+AGG + chr4.3:21032313-21032332 MS.gene068010:intron 20.0%
!!! CTGAAATAAAAAGTACAATT+AGG - chr4.3:21032315-21032334 None:intergenic 20.0%
!!! GGACATTTTTATTTTATGTT+GGG - chr4.3:21031767-21031786 None:intergenic 20.0%
!!! TATAATTGATTTCACATTCT+GGG + chr4.3:21030796-21030815 MS.gene068010:intron 20.0%
!!! TGGACATTTTTATTTTATGT+TGG - chr4.3:21031768-21031787 None:intergenic 20.0%
!!! TTGGTTTGATAAAAATCAAA+AGG - chr4.3:21031420-21031439 None:intergenic 20.0%
!!! TTTTTTGTGATTATGGTTTT+TGG + chr4.3:21030573-21030592 MS.gene068010:intron 20.0%
! AAAGATGAAGAAAATAAAGG+AGG - chr4.3:21030370-21030389 None:intergenic 25.0%
! AAATATGTCTCCTCAAAATA+TGG + chr4.3:21030874-21030893 MS.gene068010:intron 25.0%
! AAGATGAAGAAAATAAAGGA+GGG - chr4.3:21030369-21030388 None:intergenic 25.0%
! AAGGAAAGATGAAACTATAT+GGG + chr4.3:21032952-21032971 MS.gene068010:intron 25.0%
! AATGAAGTGGTTAAAAACTT+TGG - chr4.3:21031439-21031458 None:intergenic 25.0%
! ACAGACACTACATATTAATT+TGG - chr4.3:21034557-21034576 None:intergenic 25.0%
! ACATTTAGTAATTAACGAGA+GGG + chr4.3:21032063-21032082 MS.gene068010:intron 25.0%
! CAAAGATATAAAAGATTTGG+AGG + chr4.3:21032130-21032149 MS.gene068010:CDS 25.0%
! CTAAAAAATTGTATTAGAGG+AGG - chr4.3:21032597-21032616 None:intergenic 25.0%
! CTAAATTCTAATGTCAAGAA+TGG + chr4.3:21034409-21034428 MS.gene068010:CDS 25.0%
! CTACAATTTAAATTTGACCT+TGG - chr4.3:21033967-21033986 None:intergenic 25.0%
! CTGAAAAAAAGCTACATATT+TGG - chr4.3:21031155-21031174 None:intergenic 25.0%
! GAGAAATATATGAAAGAGAA+TGG + chr4.3:21031660-21031679 MS.gene068010:CDS 25.0%
! GAGAAGATATTCTTAACAAA+GGG + chr4.3:21034431-21034450 MS.gene068010:CDS 25.0%
! GCACAAAGATATAAAAGATT+TGG + chr4.3:21032127-21032146 MS.gene068010:CDS 25.0%
! TAAGTATGATTGTCATGTAT+TGG + chr4.3:21030920-21030939 MS.gene068010:intron 25.0%
! TATAAAAACATCCACATACT+TGG - chr4.3:21031824-21031843 None:intergenic 25.0%
! TCCCATGTTTAATCAATATT+TGG + chr4.3:21033836-21033855 MS.gene068010:intron 25.0%
! TGATAATAAAGAAATGCTGA+AGG + chr4.3:21031947-21031966 MS.gene068010:CDS 25.0%
! TTATATCTTTGTGCTCAATT+TGG - chr4.3:21032121-21032140 None:intergenic 25.0%
! TTCTTCGAATTATATTTGGT+TGG + chr4.3:21033180-21033199 MS.gene068010:intron 25.0%
!! AACTCTAGAAGAATTCTATA+GGG + chr4.3:21031796-21031815 MS.gene068010:intron 25.0%
!! AAGGTTAATTCCATATTTTG+AGG - chr4.3:21030887-21030906 None:intergenic 25.0%
!! ATAATTGATTTCACATTCTG+GGG + chr4.3:21030797-21030816 MS.gene068010:intron 25.0%
!! ATTTAGCTTCAATAAAATCG+AGG - chr4.3:21031096-21031115 None:intergenic 25.0%
!! TCATAAAAGCATATTCAAAG+AGG - chr4.3:21030690-21030709 None:intergenic 25.0%
!! TGAGAAATCTTTCACATTTT+TGG + chr4.3:21032455-21032474 MS.gene068010:intron 25.0%
!! TTATTTCCTTCTCTTTTTCT+AGG + chr4.3:21030431-21030450 MS.gene068010:intron 25.0%
!! TTTATTTAGAGCACTTAATG+AGG + chr4.3:21033619-21033638 MS.gene068010:intron 25.0%
!!! AATATGTAGCTTTTTTTCAG+TGG + chr4.3:21031155-21031174 MS.gene068010:intron 25.0%
!!! AGGAATTTCTTTTTTCTCAA+TGG - chr4.3:21032156-21032175 None:intergenic 25.0%
!!! ATCTTTATTTTGACTGAATG+AGG - chr4.3:21033941-21033960 None:intergenic 25.0%
!!! TTGTACTCCAATTTTTTATG+CGG - chr4.3:21031743-21031762 None:intergenic 25.0%
AAAACCTTGAATTGTCATCT+CGG + chr4.3:21033426-21033445 MS.gene068010:CDS 30.0%
AAACTTAATGATTAGGCTTG+AGG + chr4.3:21032219-21032238 MS.gene068010:intron 30.0%
AAAGAATTTACCGTAGAAGA+AGG - chr4.3:21030714-21030733 None:intergenic 30.0%
AAATTATCAGTCCAAAGAAG+AGG + chr4.3:21034360-21034379 MS.gene068010:CDS 30.0%
AACTGTTTGTTCTCAATAGT+GGG + chr4.3:21032884-21032903 MS.gene068010:intron 30.0%
AATATAAAACCCTCCTCATT+TGG - chr4.3:21032625-21032644 None:intergenic 30.0%
AGAAGCGACAAATGAAATTA+TGG + chr4.3:21031920-21031939 MS.gene068010:CDS 30.0%
ATATAAAACCCTCCTCATTT+GGG - chr4.3:21032624-21032643 None:intergenic 30.0%
ATGGTTATTACTGCATACAA+GGG - chr4.3:21033127-21033146 None:intergenic 30.0%
ATTCTTAACAAAGGGTTGAA+GGG + chr4.3:21034439-21034458 MS.gene068010:CDS 30.0%
CAAGGAAAGATGAAACTATA+TGG + chr4.3:21032951-21032970 MS.gene068010:intron 30.0%
CAGCATTTCTTTATTATCAG+TGG - chr4.3:21031946-21031965 None:intergenic 30.0%
CATACCATGCAAAATGATAA+AGG - chr4.3:21030328-21030347 None:intergenic 30.0%
CGTACTAAAATCAACCAAAT+TGG + chr4.3:21031219-21031238 MS.gene068010:intron 30.0%
GACATTTAGTAATTAACGAG+AGG + chr4.3:21032062-21032081 MS.gene068010:intron 30.0%
GACTCAATAAAATCACATGT+GGG - chr4.3:21030968-21030987 None:intergenic 30.0%
GATAAACTACCCTAATATTG+TGG + chr4.3:21034099-21034118 MS.gene068010:intron 30.0%
GGAGAAGATATTCTTAACAA+AGG + chr4.3:21034430-21034449 MS.gene068010:CDS 30.0%
GTAGATGAATAAAGCAAATC+CGG - chr4.3:21030990-21031009 None:intergenic 30.0%
GTGTTGTGAAATTAATCTGA+TGG + chr4.3:21033591-21033610 MS.gene068010:intron 30.0%
TAACTGTTTGTTCTCAATAG+TGG + chr4.3:21032883-21032902 MS.gene068010:intron 30.0%
TAATATTGTGGCAAGTCAAA+AGG + chr4.3:21034111-21034130 MS.gene068010:CDS 30.0%
TATGGTTATTACTGCATACA+AGG - chr4.3:21033128-21033147 None:intergenic 30.0%
TATTCTTAACAAAGGGTTGA+AGG + chr4.3:21034438-21034457 MS.gene068010:CDS 30.0%
TATTGTAGAACACAATGTGT+AGG + chr4.3:21031889-21031908 MS.gene068010:intron 30.0%
TCATTAAGTTTCTTACTCAC+AGG - chr4.3:21033058-21033077 None:intergenic 30.0%
TCCTAATATTTGGATGTTGA+AGG + chr4.3:21033227-21033246 MS.gene068010:intron 30.0%
TCCTTCAACATCCAAATATT+AGG - chr4.3:21033231-21033250 None:intergenic 30.0%
TGTGTAGAATTAGAACTTTG+AGG - chr4.3:21034199-21034218 None:intergenic 30.0%
TTAAGCTAATGATCATCTTC+TGG + chr4.3:21031496-21031515 MS.gene068010:CDS 30.0%
TTAGTCTCGATCCTAATATT+TGG + chr4.3:21033217-21033236 MS.gene068010:intron 30.0%
! AAATGCTGAAGGTAAAGTTT+TGG + chr4.3:21031958-21031977 MS.gene068010:intron 30.0%
! AATGCCTTTATCATTTTGCA+TGG + chr4.3:21030321-21030340 MS.gene068010:CDS 30.0%
! ACATGTGATTTTATTGAGTC+CGG + chr4.3:21030968-21030987 MS.gene068010:intron 30.0%
! ATATTTGTTGCCATTGTTGT+TGG + chr4.3:21034071-21034090 MS.gene068010:intron 30.0%
! ATGATCATTAGCTTAACGTA+TGG - chr4.3:21031492-21031511 None:intergenic 30.0%
! ATTCTAAGAGGTTATTTGTG+TGG + chr4.3:21032243-21032262 MS.gene068010:intron 30.0%
! GAACTCTAGAAGAATTCTAT+AGG + chr4.3:21031795-21031814 MS.gene068010:intron 30.0%
!! ACACTGTGGAAGTTATTTTA+AGG - chr4.3:21032765-21032784 None:intergenic 30.0%
!! CTTCTTTTCTTTTGATAGCA+AGG + chr4.3:21032933-21032952 MS.gene068010:intron 30.0%
!! TTCTGATGTTTGCTATTTGT+AGG + chr4.3:21033004-21033023 MS.gene068010:intron 30.0%
!! TTTGACTTGCCACAATATTA+GGG - chr4.3:21034111-21034130 None:intergenic 30.0%
!!! TTTTGACTTGCCACAATATT+AGG - chr4.3:21034112-21034131 None:intergenic 30.0%
AAGCCTAAACCTTACACATA+TGG - chr4.3:21034010-21034029 None:intergenic 35.0%
AAGTTTCTTGTGCAGACAAA+TGG + chr4.3:21033642-21033661 MS.gene068010:intron 35.0%
ACCTACACTACATAAGCAAA+AGG + chr4.3:21033497-21033516 MS.gene068010:CDS 35.0%
AGGGTTTGGAAAAAAAGGAA+GGG - chr4.3:21032709-21032728 None:intergenic 35.0%
ATAGTCGCTATCTCCTATTT+AGG + chr4.3:21032366-21032385 MS.gene068010:intron 35.0%
CCAAGGATTTGATCTCATAT+TGG + chr4.3:21030644-21030663 MS.gene068010:CDS 35.0%
CCAATATGAGATCAAATCCT+TGG - chr4.3:21030647-21030666 None:intergenic 35.0%
CCTTATGCCGCATAAAAAAT+TGG + chr4.3:21031733-21031752 MS.gene068010:intron 35.0%
CTAATTCTACACAGAAAGTG+TGG + chr4.3:21034206-21034225 MS.gene068010:CDS 35.0%
CTTAAATGGGAAGATGCATT+TGG + chr4.3:21034615-21034634 MS.gene068010:CDS 35.0%
CTTTGGATAACTGGTGTATT+TGG - chr4.3:21031198-21031217 None:intergenic 35.0%
GAAACTATATGGGAAACAAG+TGG + chr4.3:21032962-21032981 MS.gene068010:intron 35.0%
GATCAATCTCAAGTTCAATC+AGG - chr4.3:21031268-21031287 None:intergenic 35.0%
GCAAGTAAGGATTCATTTGT+AGG + chr4.3:21033740-21033759 MS.gene068010:intron 35.0%
GGACTCAATAAAATCACATG+TGG - chr4.3:21030969-21030988 None:intergenic 35.0%
GTATGATTGTCATGTATTGG+TGG + chr4.3:21030923-21030942 MS.gene068010:intron 35.0%
GTCAAAATAAAGATCTCCCA+AGG + chr4.3:21033947-21033966 MS.gene068010:intron 35.0%
GTCAGTTTCAATTGCTTGTA+CGG - chr4.3:21030611-21030630 None:intergenic 35.0%
GTGGAAAACAAACTTGTACA+TGG + chr4.3:21033880-21033899 MS.gene068010:intron 35.0%
GTTGGAACTTATTGATCCAA+TGG + chr4.3:21033858-21033877 MS.gene068010:intron 35.0%
TAACGCATGAAATTCCTTCT+AGG + chr4.3:21031324-21031343 MS.gene068010:intron 35.0%
TAATGTTGTCCTTCATTGTG+AGG + chr4.3:21034576-21034595 MS.gene068010:CDS 35.0%
TATAAAACCCTCCTCATTTG+GGG - chr4.3:21032623-21032642 None:intergenic 35.0%
TCCTATGTAAGTTCTTGATC+TGG + chr4.3:21030474-21030493 MS.gene068010:intron 35.0%
TCGTGGAAAAACAACCAATT+TGG - chr4.3:21031236-21031255 None:intergenic 35.0%
TGAATGAAGTCTTACTTGCT+TGG - chr4.3:21032183-21032202 None:intergenic 35.0%
TGGAAGAAATAGAGGACATT+GGG - chr4.3:21032681-21032700 None:intergenic 35.0%
TGGGGTCTGCTTATTAAAAT+GGG + chr4.3:21031056-21031075 MS.gene068010:intron 35.0%
TTAGTACGTCTTTGGATAAC+TGG - chr4.3:21031207-21031226 None:intergenic 35.0%
TTATCTAGCACCAACAACAA+TGG - chr4.3:21034084-21034103 None:intergenic 35.0%
TTCATCTACCTTCCATTTAC+CGG + chr4.3:21031001-21031020 MS.gene068010:intron 35.0%
TTCTACCTATCTTAGTCTCA+CGG + chr4.3:21032038-21032057 MS.gene068010:intron 35.0%
TTCTTCATGGTTTCTCAAAC+TGG + chr4.3:21030292-21030311 MS.gene068010:CDS 35.0%
TTTGAGGAGACATATTTGCT+TGG - chr4.3:21030871-21030890 None:intergenic 35.0%
! ATTGTATTAGAGGAGGGTTT+TGG - chr4.3:21032590-21032609 None:intergenic 35.0%
! CTTTTATGAGCCTTCTTCTA+CGG + chr4.3:21030701-21030720 MS.gene068010:CDS 35.0%
! TCCTTTTGCTTATGTAGTGT+AGG - chr4.3:21033501-21033520 None:intergenic 35.0%
! TGTTCCTTTAGTTTCCACTA+TGG - chr4.3:21034146-21034165 None:intergenic 35.0%
! TTGTATTAGAGGAGGGTTTT+GGG - chr4.3:21032589-21032608 None:intergenic 35.0%
!! AACAGTGATGATGGATGATA+AGG + chr4.3:21034462-21034481 MS.gene068010:CDS 35.0%
!! ACAAGTTTGTTTTCCACCAT+TGG - chr4.3:21033877-21033896 None:intergenic 35.0%
!! CTCCTATTTAGGCTTTGTTT+GGG + chr4.3:21032377-21032396 MS.gene068010:intron 35.0%
!! GAACAAAGGCATCAAAGATT+TGG + chr4.3:21033683-21033702 MS.gene068010:CDS 35.0%
!! GGTTGATTTTAGTACGTCTT+TGG - chr4.3:21031215-21031234 None:intergenic 35.0%
!! TCTCCTATTTAGGCTTTGTT+TGG + chr4.3:21032376-21032395 MS.gene068010:intron 35.0%
!! TCTTCTAGAGTTCAAGTAGT+TGG - chr4.3:21031788-21031807 None:intergenic 35.0%
!! TGTGATTATGGTTTTTGGAC+AGG + chr4.3:21030578-21030597 MS.gene068010:intron 35.0%
!! TTAAAATGGGTGTCGCTAAT+CGG + chr4.3:21031069-21031088 MS.gene068010:intron 35.0%
!!! CCAATTTTTTATGCGGCATA+AGG - chr4.3:21031736-21031755 None:intergenic 35.0%
!!! TTTTGACTTGGCCCAATTTT+AGG - chr4.3:21033267-21033286 None:intergenic 35.0%
!!! TTTTGGTGTTAAGTCAGTTG+TGG + chr4.3:21031975-21031994 MS.gene068010:intron 35.0%
!!! TTTTTTAGTTCCCCCAAATG+AGG + chr4.3:21032609-21032628 MS.gene068010:intron 35.0%
AAACACACATGTGCATGGTA+CGG - chr4.3:21033797-21033816 None:intergenic 40.0%
AAGAAATAGAGGACATTGGG+AGG - chr4.3:21032678-21032697 None:intergenic 40.0%
AAGAGGCCTAGAAAAAGAGA+AGG - chr4.3:21030440-21030459 None:intergenic 40.0%
AAGTTCTTGATCTGGCTGTT+TGG + chr4.3:21030482-21030501 MS.gene068010:intron 40.0%
AATAAGCAGACCCCACTAAT+GGG - chr4.3:21031051-21031070 None:intergenic 40.0%
AATGTGGCCTCTCACTTAAA+TGG + chr4.3:21034601-21034620 MS.gene068010:CDS 40.0%
ACAGCAGAGATTAACAAAGC+TGG + chr4.3:21033318-21033337 MS.gene068010:CDS 40.0%
AGACTCCAAACAGAGAACAA+AGG + chr4.3:21033669-21033688 MS.gene068010:CDS 40.0%
AGAGAAACTCATTGCCAACA+AGG + chr4.3:21031695-21031714 MS.gene068010:CDS 40.0%
AGATTACTGAGACCCATTAG+TGG + chr4.3:21031036-21031055 MS.gene068010:intron 40.0%
AGGCCATATGTGTAAGGTTT+AGG + chr4.3:21034004-21034023 MS.gene068010:intron 40.0%
ATAAAACCCTCCTCATTTGG+GGG - chr4.3:21032622-21032641 None:intergenic 40.0%
ATCCTTACTTGCTTAGTTGC+AGG - chr4.3:21033732-21033751 None:intergenic 40.0%
ATCTCGGTGGAAAAAAACAC+AGG + chr4.3:21033442-21033461 MS.gene068010:CDS 40.0%
ATGAGCCATACTTCAGAGAA+GGG - chr4.3:21033086-21033105 None:intergenic 40.0%
ATGTGGCCTCTCACTTAAAT+GGG + chr4.3:21034602-21034621 MS.gene068010:CDS 40.0%
ATTACTGAGACCCATTAGTG+GGG + chr4.3:21031038-21031057 MS.gene068010:intron 40.0%
ATTCCCGTCATGCCTAAAAT+TGG + chr4.3:21033252-21033271 MS.gene068010:CDS 40.0%
ATTTAAGTGAGAGGCCACAT+TGG - chr4.3:21034602-21034621 None:intergenic 40.0%
CAACAAGGTAAACAGCTATG+TGG + chr4.3:21031710-21031729 MS.gene068010:intron 40.0%
CACATAGCTGTTTACCTTGT+TGG - chr4.3:21031712-21031731 None:intergenic 40.0%
CATAGAAACACACATGTGCA+TGG - chr4.3:21033802-21033821 None:intergenic 40.0%
CATCTTCCCATTTAAGTGAG+AGG - chr4.3:21034611-21034630 None:intergenic 40.0%
CGAGTGATATACAAACACTG+TGG - chr4.3:21032779-21032798 None:intergenic 40.0%
CGGTAAATTCTTTGCCTTCA+AGG + chr4.3:21030721-21030740 MS.gene068010:intron 40.0%
CTCCCAAACAAAGCCTAAAT+AGG - chr4.3:21032382-21032401 None:intergenic 40.0%
CTTGATCTAGTGCAGACAAA+TGG + chr4.3:21032086-21032105 MS.gene068010:intron 40.0%
GAAAAAAAGGAAGGGGTAAG+TGG - chr4.3:21032701-21032720 None:intergenic 40.0%
GAGGGTTTGGAAAAAAAGGA+AGG - chr4.3:21032710-21032729 None:intergenic 40.0%
GATTACTGAGACCCATTAGT+GGG + chr4.3:21031037-21031056 MS.gene068010:intron 40.0%
GCCAGATCAAGAACTTACAT+AGG - chr4.3:21030478-21030497 None:intergenic 40.0%
GGAACTTATTGATCCAATGG+TGG + chr4.3:21033861-21033880 MS.gene068010:intron 40.0%
GGGTTTGGAAAAAAAGGAAG+GGG - chr4.3:21032708-21032727 None:intergenic 40.0%
GGTGCAAAAACTGCAAAAGA+AGG + chr4.3:21034483-21034502 MS.gene068010:CDS 40.0%
GTGGAAGAAATAGAGGACAT+TGG - chr4.3:21032682-21032701 None:intergenic 40.0%
GTGGACTTGTGCTTTATGTT+CGG + chr4.3:21033386-21033405 MS.gene068010:CDS 40.0%
GTGGACTTGTGCTTTATGTT+TGG + chr4.3:21033386-21033405 MS.gene068010:CDS 40.0%
GTGGGGTCTGCTTATTAAAA+TGG + chr4.3:21031055-21031074 MS.gene068010:intron 40.0%
GTTAATCTCTGCTGTTCCTT+TGG - chr4.3:21033313-21033332 None:intergenic 40.0%
GTTGGCAATGAGTTTCTCTA+AGG - chr4.3:21031694-21031713 None:intergenic 40.0%
TAAACAACTACTGGAGGAAG+TGG + chr4.3:21031604-21031623 MS.gene068010:CDS 40.0%
TAATAAGCAGACCCCACTAA+TGG - chr4.3:21031052-21031071 None:intergenic 40.0%
TAGTCAGAGTTCTACACAGA+AGG + chr4.3:21033350-21033369 MS.gene068010:CDS 40.0%
TCATCTACCTTCCATTTACC+GGG + chr4.3:21031002-21031021 MS.gene068010:intron 40.0%
TCTATAGGGAACCAAGTATG+TGG + chr4.3:21031810-21031829 MS.gene068010:intron 40.0%
TCTCGGTGGAAAAAAACACA+GGG + chr4.3:21033443-21033462 MS.gene068010:CDS 40.0%
TGACTCATATGCAGAAACCA+AGG + chr4.3:21030627-21030646 MS.gene068010:CDS 40.0%
TGATGCCTTTGTTCTCTGTT+TGG - chr4.3:21033677-21033696 None:intergenic 40.0%
TTCCCGTCATGCCTAAAATT+GGG + chr4.3:21033253-21033272 MS.gene068010:CDS 40.0%
TTCCTGCAACTAAGCAAGTA+AGG + chr4.3:21033727-21033746 MS.gene068010:intron 40.0%
TTGGAATTATGCATCCCAAC+AGG - chr4.3:21034538-21034557 None:intergenic 40.0%
TTTGGCGTGAAGTAACATCA+TGG - chr4.3:21031137-21031156 None:intergenic 40.0%
TTTGGGGGGAGAGAAATATA+GGG + chr4.3:21032427-21032446 MS.gene068010:intron 40.0%
! TAGCTGATTCACCTCTTCTT+TGG - chr4.3:21034374-21034393 None:intergenic 40.0%
! TCAGCCATAGTGGAAACTAA+AGG + chr4.3:21034139-21034158 MS.gene068010:CDS 40.0%
!! ACTGAATGAGGCTAGTTCTA+TGG - chr4.3:21033929-21033948 None:intergenic 40.0%
!! CAAAGGCATCAAAGATTTGG+AGG + chr4.3:21033686-21033705 MS.gene068010:CDS 40.0%
!! TAAAATGGGTGTCGCTAATC+GGG + chr4.3:21031070-21031089 MS.gene068010:intron 40.0%
!! TCATGTATTGGTGGTGTGTT+TGG + chr4.3:21030932-21030951 MS.gene068010:intron 40.0%
!! TCATTTGTAGGCTAGTTCTG+TGG + chr4.3:21033752-21033771 MS.gene068010:intron 40.0%
!! TTAGGCTTTGTTTGGGAGTT+CGG + chr4.3:21032384-21032403 MS.gene068010:intron 40.0%
AAATAGAGGACATTGGGAGG+AGG - chr4.3:21032675-21032694 None:intergenic 45.0%
AAGCAGTGCAAATGTCCCTA+AGG - chr4.3:21034675-21034694 None:intergenic 45.0%
AATAGAGGACATTGGGAGGA+GGG - chr4.3:21032674-21032693 None:intergenic 45.0%
ACCTTGAATTGTCATCTCGG+TGG + chr4.3:21033429-21033448 MS.gene068010:CDS 45.0%
ACTAAAGGAACAGCAGAGAG+CGG + chr4.3:21034154-21034173 MS.gene068010:CDS 45.0%
AGGGGAGGGTTTGGAAAAAA+AGG - chr4.3:21032714-21032733 None:intergenic 45.0%
CATCTACCTTCCATTTACCG+GGG + chr4.3:21031003-21031022 MS.gene068010:intron 45.0%
CGTGGAGGTTAAACAACTAC+TGG + chr4.3:21031595-21031614 MS.gene068010:CDS 45.0%
GATGAGCCATACTTCAGAGA+AGG - chr4.3:21033087-21033106 None:intergenic 45.0%
GATTAACAAAGCTGGTGGAG+AGG + chr4.3:21033326-21033345 MS.gene068010:CDS 45.0%
GCAGAGATTAACAAAGCTGG+TGG + chr4.3:21033321-21033340 MS.gene068010:CDS 45.0%
GCTAAGAGGCCATATGTGTA+AGG + chr4.3:21033998-21034017 MS.gene068010:intron 45.0%
GGAGGTTAAACAACTACTGG+AGG + chr4.3:21031598-21031617 MS.gene068010:CDS 45.0%
GGATACACCAGAGCAAAAAG+AGG - chr4.3:21030457-21030476 None:intergenic 45.0%
GGGGTAAGTGGAAGAAATAG+AGG - chr4.3:21032689-21032708 None:intergenic 45.0%
GTAATCTTCTACTTCTGCCC+CGG - chr4.3:21031023-21031042 None:intergenic 45.0%
GTTGAAGGGAACAGTGATGA+TGG + chr4.3:21034453-21034472 MS.gene068010:CDS 45.0%
TAAGAAGCTCGTCCAAAGTC+CGG - chr4.3:21031531-21031550 None:intergenic 45.0%
TAGATTCGTGGCATGCTAAG+AGG + chr4.3:21033984-21034003 MS.gene068010:intron 45.0%
TCATTACCATGCGTGACATC+AGG + chr4.3:21031454-21031473 MS.gene068010:intron 45.0%
TCCACCGAGATGACAATTCA+AGG - chr4.3:21033433-21033452 None:intergenic 45.0%
TGTCACCGTGAGACTAAGAT+AGG - chr4.3:21032046-21032065 None:intergenic 45.0%
TGTTGCTCTTGTTGAGTGCT+GGG + chr4.3:21032282-21032301 MS.gene068010:intron 45.0%
TTAGCTTAACGTATGGCCAG+AGG - chr4.3:21031485-21031504 None:intergenic 45.0%
TTAGTTCCCCCAAATGAGGA+GGG + chr4.3:21032613-21032632 MS.gene068010:intron 45.0%
TTGTTGCTCTTGTTGAGTGC+TGG + chr4.3:21032281-21032300 MS.gene068010:intron 45.0%
! AGAAGGAAGTGCAGAAAGAG+TGG + chr4.3:21033367-21033386 MS.gene068010:CDS 45.0%
! AGTCTTACTTGCTTGGTAGC+AGG - chr4.3:21032176-21032195 None:intergenic 45.0%
! CTTTGGGGGGAGAGAAATAT+AGG + chr4.3:21032426-21032445 MS.gene068010:intron 45.0%
! TAAGACTAGCTCGACCTTGA+AGG - chr4.3:21030738-21030757 None:intergenic 45.0%
! TAAGGCTTTGTCTGCGAGTT+TGG - chr4.3:21032747-21032766 None:intergenic 45.0%
! TAGGCTTGAGGCATTCTAAG+AGG + chr4.3:21032231-21032250 MS.gene068010:intron 45.0%
! TGGCCCAATTTTAGGCATGA+CGG - chr4.3:21033259-21033278 None:intergenic 45.0%
! TGTCACGCATGGTAATGAAG+TGG - chr4.3:21031452-21031471 None:intergenic 45.0%
! TGTTCCTTTGGTTTCCACTG+TGG - chr4.3:21033301-21033320 None:intergenic 45.0%
! TTCTAGGCCTCTTTTTGCTC+TGG + chr4.3:21030447-21030466 MS.gene068010:intron 45.0%
! TTTAGTTCCCCCAAATGAGG+AGG + chr4.3:21032612-21032631 MS.gene068010:intron 45.0%
!! AAAGGCATCATCAGCCATAG+TGG + chr4.3:21034129-21034148 MS.gene068010:CDS 45.0%
!! AGGCTAGTTCTATGGTGCAT+AGG - chr4.3:21033921-21033940 None:intergenic 45.0%
!! CATCTTCTGGCTCATCATAC+CGG + chr4.3:21031509-21031528 MS.gene068010:CDS 45.0%
!!! ATTAGAGGAGGGTTTTGGGA+GGG - chr4.3:21032585-21032604 None:intergenic 45.0%
!!! GCTGATGACGCATTTTGACT+TGG - chr4.3:21033279-21033298 None:intergenic 45.0%
!!! TATTAGAGGAGGGTTTTGGG+AGG - chr4.3:21032586-21032605 None:intergenic 45.0%
AAATGCGTCATCAGCCACAG+TGG + chr4.3:21033284-21033303 MS.gene068010:CDS 50.0%
AACCTCCACGTGACTACTTG+CGG - chr4.3:21031585-21031604 None:intergenic 50.0%
AAGAACCTGTGTGAGCCTGT+TGG + chr4.3:21034520-21034539 MS.gene068010:CDS 50.0%
AGAACCTGTGTGAGCCTGTT+GGG + chr4.3:21034521-21034540 MS.gene068010:CDS 50.0%
AGCCATACTTCAGAGAAGGG+TGG - chr4.3:21033083-21033102 None:intergenic 50.0%
ATAGAGGACATTGGGAGGAG+GGG - chr4.3:21032673-21032692 None:intergenic 50.0%
CAATCAGGTACTCGTTCTCG+TGG - chr4.3:21031253-21031272 None:intergenic 50.0%
CCTTCATTGTGAGGCCAATG+TGG + chr4.3:21034585-21034604 MS.gene068010:CDS 50.0%
CGTGACTACTTGCGGTTTCA+TGG - chr4.3:21031577-21031596 None:intergenic 50.0%
CTGTGGTGCACAAGTGAAGT+AGG + chr4.3:21033769-21033788 MS.gene068010:intron 50.0%
CTTTGTCTGCGAGTTTGGAG+GGG - chr4.3:21032742-21032761 None:intergenic 50.0%
GCTTTGTCTGCGAGTTTGGA+GGG - chr4.3:21032743-21032762 None:intergenic 50.0%
GGAGCAAACGACATCCTAGA+AGG - chr4.3:21031341-21031360 None:intergenic 50.0%
GTGAAACCTGATGTCACGCA+TGG - chr4.3:21031463-21031482 None:intergenic 50.0%
GTGACATCAGGTTTCACCTC+TGG + chr4.3:21031466-21031485 MS.gene068010:intron 50.0%
TCAGCCACAGTGGAAACCAA+AGG + chr4.3:21033294-21033313 MS.gene068010:CDS 50.0%
TCTACTTCTGCCCCGGTAAA+TGG - chr4.3:21031016-21031035 None:intergenic 50.0%
TGAAACCGCAAGTAGTCACG+TGG + chr4.3:21031577-21031596 MS.gene068010:CDS 50.0%
TGGCTCATCATACCGGACTT+TGG + chr4.3:21031516-21031535 MS.gene068010:CDS 50.0%
TGTGTGTGTGTGTGTGTGTG+TGG + chr4.3:21034035-21034054 MS.gene068010:intron 50.0%
! CCACATTGGCCTCACAATGA+AGG - chr4.3:21034588-21034607 None:intergenic 50.0%
! CTTTGTTTGGGAGTTCGGAG+GGG + chr4.3:21032389-21032408 MS.gene068010:intron 50.0%
! GGCCCAATTTTAGGCATGAC+GGG - chr4.3:21033258-21033277 None:intergenic 50.0%
!! GCTTTGTTTGGGAGTTCGGA+GGG + chr4.3:21032388-21032407 MS.gene068010:intron 50.0%
!! TGCCACCCTTCTCTGAAGTA+TGG + chr4.3:21033078-21033097 MS.gene068010:intron 50.0%
AACCGCAAGTAGTCACGTGG+AGG + chr4.3:21031580-21031599 MS.gene068010:CDS 55.0%
ACATTGGGAGGAGGGGCTTT+GGG - chr4.3:21032666-21032685 None:intergenic 55.0%
CTTCTGCCCCGGTAAATGGA+AGG - chr4.3:21031012-21031031 None:intergenic 55.0%
TCTGCGAGTTTGGAGGGGAA+GGG - chr4.3:21032737-21032756 None:intergenic 55.0%
! GGCTTTGTCTGCGAGTTTGG+AGG - chr4.3:21032744-21032763 None:intergenic 55.0%
!! GGCTTTGTTTGGGAGTTCGG+AGG + chr4.3:21032387-21032406 MS.gene068010:intron 55.0%
ACAGCAGAGAGCGGCAAAGC+TGG + chr4.3:21034163-21034182 MS.gene068010:CDS 60.0%
CATTGGGAGGAGGGGCTTTG+GGG - chr4.3:21032665-21032684 None:intergenic 60.0%
CGAGTTTGGAGGGGAAGGGA+GGG - chr4.3:21032733-21032752 None:intergenic 60.0%
GACATTGGGAGGAGGGGCTT+TGG - chr4.3:21032667-21032686 None:intergenic 60.0%
GAGGGGAAGGAAGGGCTTTG+GGG + chr4.3:21032411-21032430 MS.gene068010:intron 60.0%
GAGTTTGGAGGGGAAGGGAG+GGG - chr4.3:21032732-21032751 None:intergenic 60.0%
GCATCCCAACAGGCTCACAC+AGG - chr4.3:21034528-21034547 None:intergenic 60.0%
GGAGGGGAAGGAAGGGCTTT+GGG + chr4.3:21032410-21032429 MS.gene068010:intron 60.0%
GTCTGCGAGTTTGGAGGGGA+AGG - chr4.3:21032738-21032757 None:intergenic 60.0%
GTTTGGGAGTTCGGAGGGGA+GGG + chr4.3:21032393-21032412 MS.gene068010:intron 60.0%
TGTTTGGGAGTTCGGAGGGG+AGG + chr4.3:21032392-21032411 MS.gene068010:intron 60.0%
TTTGGGAGTTCGGAGGGGAG+GGG + chr4.3:21032394-21032413 MS.gene068010:intron 60.0%
! AGGGGAAGGAAGGGCTTTGG+GGG + chr4.3:21032412-21032431 MS.gene068010:intron 60.0%
! ATTGGGAGGAGGGGCTTTGG+GGG - chr4.3:21032664-21032683 None:intergenic 60.0%
GAGCGGCAAAGCTGGTGGCA+AGG + chr4.3:21034171-21034190 MS.gene068010:CDS 65.0%
GCAGAGAGCGGCAAAGCTGG+TGG + chr4.3:21034166-21034185 MS.gene068010:CDS 65.0%
GCGAGTTTGGAGGGGAAGGG+AGG - chr4.3:21032734-21032753 None:intergenic 65.0%
GGGAGGGGAAGGAAGGGCTT+TGG + chr4.3:21032409-21032428 MS.gene068010:intron 65.0%
TCGGAGGGGAGGGGAAGGAA+GGG + chr4.3:21032403-21032422 MS.gene068010:intron 65.0%
TTCGGAGGGGAGGGGAAGGA+AGG + chr4.3:21032402-21032421 MS.gene068010:intron 65.0%
TTGGAGGGGAAGGGAGGGGA+GGG - chr4.3:21032728-21032747 None:intergenic 65.0%
TTTGGAGGGGAAGGGAGGGG+AGG - chr4.3:21032729-21032748 None:intergenic 65.0%
!! GGGGAAGGAAGGGCTTTGGG+GGG + chr4.3:21032413-21032432 MS.gene068010:intron 65.0%
!! TTGGGAGGAGGGGCTTTGGG+GGG - chr4.3:21032663-21032682 None:intergenic 65.0%
GGAGTTCGGAGGGGAGGGGA+AGG + chr4.3:21032398-21032417 MS.gene068010:intron 70.0%
GGGGAAGGGAGGGGAGGGTT+TGG - chr4.3:21032723-21032742 None:intergenic 70.0%


Chromosome Type Strat End Strand Name
chr4.3 gene 21030287 21034696 21030287 ID=MS.gene068010
chr4.3 mRNA 21030287 21034696 21030287 ID=MS.gene068010.t1;Parent=MS.gene068010
chr4.3 exon 21030287 21030342 21030287 ID=MS.gene068010.t1.exon1;Parent=MS.gene068010.t1
chr4.3 CDS 21030287 21030342 21030287 ID=cds.MS.gene068010.t1;Parent=MS.gene068010.t1
chr4.3 exon 21030453 21030479 21030453 ID=MS.gene068010.t1.exon2;Parent=MS.gene068010.t1
chr4.3 CDS 21030453 21030479 21030453 ID=cds.MS.gene068010.t1;Parent=MS.gene068010.t1
chr4.3 exon 21030600 21030722 21030600 ID=MS.gene068010.t1.exon3;Parent=MS.gene068010.t1
chr4.3 CDS 21030600 21030722 21030600 ID=cds.MS.gene068010.t1;Parent=MS.gene068010.t1
chr4.3 exon 21031476 21031716 21031476 ID=MS.gene068010.t1.exon4;Parent=MS.gene068010.t1
chr4.3 CDS 21031476 21031716 21031476 ID=cds.MS.gene068010.t1;Parent=MS.gene068010.t1
chr4.3 exon 21031897 21031968 21031897 ID=MS.gene068010.t1.exon5;Parent=MS.gene068010.t1
chr4.3 CDS 21031897 21031968 21031897 ID=cds.MS.gene068010.t1;Parent=MS.gene068010.t1
chr4.3 exon 21032101 21032187 21032101 ID=MS.gene068010.t1.exon6;Parent=MS.gene068010.t1
chr4.3 CDS 21032101 21032187 21032101 ID=cds.MS.gene068010.t1;Parent=MS.gene068010.t1
chr4.3 exon 21033249 21033572 21033249 ID=MS.gene068010.t1.exon7;Parent=MS.gene068010.t1
chr4.3 CDS 21033249 21033572 21033249 ID=cds.MS.gene068010.t1;Parent=MS.gene068010.t1
chr4.3 exon 21033657 21033743 21033657 ID=MS.gene068010.t1.exon8;Parent=MS.gene068010.t1
chr4.3 CDS 21033657 21033743 21033657 ID=cds.MS.gene068010.t1;Parent=MS.gene068010.t1
chr4.3 exon 21034100 21034696 21034100 ID=MS.gene068010.t1.exon9;Parent=MS.gene068010.t1
chr4.3 CDS 21034100 21034696 21034100 ID=cds.MS.gene068010.t1;Parent=MS.gene068010.t1
Gene Sequence

>MS.gene068010

ATGGCTTCTTCATGGTTTCTCAAACTGGCTTTCAAATGCCTTTATCATTTTGCATGGTATGAAAATGTATTACGTATATCCCTCCTTTATTTTCTTCATCTTTTTCACATTATTAGTTGCATGCTGATCAATAGTACTCTTCTTTTATTTCCTTCTCTTTTTCTAGGCCTCTTTTTGCTCTGGTGTATCCTATGTAAGTTCTTGATCTGGCTGTTTGGTATATTGAAATATTTGCTACCTTTTACATTATTGTTTTGACATTTTGTTTTGTTATGCTCTTTTTTGTTTTTTTGTGATTATGGTTTTTGGACAGGTGTGCTTCCGTACAAGCAATTGAAACTGACTCATATGCAGAAACCAAGGATTTGATCTCATATTGGATACTTCTTTCCTTAATTTACCTCTTTGAATATGCTTTTATGAGCCTTCTTCTACGGTAAATTCTTTGCCTTCAAGGTCGAGCTAGTCTTATATCATTACAAAGTGACACTTTTTCTAATAATTAAAAATATAATTGATTTCACATTCTGGGGATAAGTGTTTCTTTGTATTTTTTAAACACTAAACATTTGGTTTTGTGACCAAGCAAATATGTCTCCTCAAAATATGGAATTAACCTTGTTTTTACAACAATAAGTATGATTGTCATGTATTGGTGGTGTGTTTGGTGAAATCACGCCCACATGTGATTTTATTGAGTCCGGATTTGCTTTATTCATCTACCTTCCATTTACCGGGGCAGAAGTAGAAGATTACTGAGACCCATTAGTGGGGTCTGCTTATTAAAATGGGTGTCGCTAATCGGGCCTCGATTTTATTGAAGCTAAATATGTAGCTTTTGCTAAAACCATGATGTTACTTCACGCCAAATATGTAGCTTTTTTTCAGTGGCACACAATGTTACTTCGCCAAATACACCAGTTATCCAAAGACGTACTAAAATCAACCAAATTGGTTGTTTTTCCACGAGAACGAGTACCTGATTGAACTTGAGATTGATCAATGCACATTTAATGTGCCAAATTTTTAGTAGAGATTAACGCATGAAATTCCTTCTAGGATGTCGTTTGCTCCATAAAAAAAGAAACCATGATTTTTTATTCATTGAAAATAAATGTTGCAAATGATTCCCTTTTGATTTTTATCAAACCAAAGTTTTTAACCACTTCATTACCATGCGTGACATCAGGTTTCACCTCTGGCCATACGTTAAGCTAATGATCATCTTCTGGCTCATCATACCGGACTTTGGACGAGCTTCTTATATTTATAATAAGCTTATTAGTTCCATGAAACCGCAAGTAGTCACGTGGAGGTTAAACAACTACTGGAGGAAGTGGTTTTGTAAGAAAGATAATTTTTTAATGCATGCAGAGAAATATATGAAAGAGAATGGAACTGAAGCCTTAGAGAAACTCATTGCCAACAAGGTAAACAGCTATGTGGCCTTATGCCGCATAAAAAATTGGAGTACAAACCCAACATAAAATAAAAATGTCCAACTACTTGAACTCTAGAAGAATTCTATAGGGAACCAAGTATGTGGATGTTTTTATATCTGCATCTGCAGTTGAAAATATTTGCTAATTCTTTGTTTTTTCGTATTGTAGAACACAATGTGTAGGTCTGATGCAGAAGCGACAAATGAAATTATGGCCACTGATAATAAAGAAATGCTGAAGGTAAAGTTTTGGTGTTAAGTCAGTTGTGGTATTAATATTGTTCTTGTTACAAGTTCTTGTATGCGTCGATTCTACCTATCTTAGTCTCACGGTGACATTTAGTAATTAACGAGAGGGCTTGATCTAGTGCAGACAAATGGAGAAAGACTCCAAATTGAGCACAAAGATATAAAAGATTTGGAGGCAATTGAGAAAAAAGAAATTCCTGCTACCAAGCAAGTAAGACTTCATTCATATTCACTCCAAATAGAAACTTAATGATTAGGCTTGAGGCATTCTAAGAGGTTATTTGTGTGGATTTGTTCATGATTTTTGTTGCTCTTGTTGAGTGCTGGGATTTTAGCCTAATTGTACTTTTTATTTCAGGTGTTTCTGCATTTTCATCTAAAATTTAAGTATAGTCGCTATCTCCTATTTAGGCTTTGTTTGGGAGTTCGGAGGGGAGGGGAAGGAAGGGCTTTGGGGGGAGAGAAATATAGGGAAAATTGAGAAATCTTTCACATTTTTGGAAAGAGTAATTTTTTAGAGTGATAAATTAATGTTTATGATTGCTATATTTTTAAATTTAAGAATATGATAACAACATATATTAAATTTAAAGAATTCATATAAACCCTCCCAAAACCCTCCTCTAATACAATTTTTTAGTTCCCCCAAATGAGGAGGGTTTTATATTTTGAAGAAAAATAAACCCCCCAAAGCCCCTCCTCCCAATGTCCTCTATTTCTTCCACTTACCCCTTCCTTTTTTTCCAAACCCTCCCCTCCCTTCCCCTCCAAACTCGCAGACAAAGCCTTAAAATAACTTCCACAGTGTTTGTATATCACTCGTATGACAGTCTTTGAACTGTGTGAACTAGTTGTATATATATTTTCTTGTACTATTCAAAGTTTTCATTAATGCTACAATGATTGTAACTGTTTGTTCTCAATAGTGGGTCTTTTACTACAGTGTTCTTTAGTTTCTTCTTTTCTTTTGATAGCAAGGAAAGATGAAACTATATGGGAAACAAGTGGTTACAAATGTGAGCGACGATTCTGATGTTTGCTATTTGTAGGAAATGAAAAGAACATGTTTTATTTTCTACCTGTGAGTAAGAAACTTAATGATGCCACCCTTCTCTGAAGTATGGCTCATCAGATTGAACTATCATCTCCCTTGTATGCAGTAATAACCATAGTTCTTTGTTAAAAATGTTAAAAAAATCTGTATTCTTCGAATTATATTTGGTTGGCTTGCATGAAGTACTTAGTCTCGATCCTAATATTTGGATGTTGAAGGATATTCCCGTCATGCCTAAAATTGGGCCAAGTCAAAATGCGTCATCAGCCACAGTGGAAACCAAAGGAACAGCAGAGATTAACAAAGCTGGTGGAGAGGTTAGTCAGAGTTCTACACAGAAGGAAGTGCAGAAAGAGTGGACTTGTGCTTTATGTTTGGTAACAACATCAAGCGAGAAAACCTTGAATTGTCATCTCGGTGGAAAAAAACACAGGGATAGTGTTGAAACATTAATATCAAAGAAGCAACCTACACTACATAAGCAAAAGGATGCAAAAGTGACAAATAAAATCATAGCTATTGATAATAAAGAAATAGTAAAGGTAAAGTTTTGATGTTAAGTGTTGTGAAATTAATCTGATGGTGACATTTATTTAGAGCACTTAATGAGGAAGTTTCTTGTGCAGACAAATGGAGAAAGACTCCAAACAGAGAACAAAGGCATCAAAGATTTGGAGGCCATTGAGAAAAAAGAAATTCCTGCAACTAAGCAAGTAAGGATTCATTTGTAGGCTAGTTCTGTGGTGCACAAGTGAAGTAGGTGCCGTACCATGCACATGTGTGTTTCTATGATTAGATCAATAAGTCCCATGTTTAATCAATATTTGGTTGGAACTTATTGATCCAATGGTGGAAAACAAACTTGTACATGGTGCAACACTGTTTTACCTATGCACCATAGAACTAGCCTCATTCAGTCAAAATAAAGATCTCCCAAGGTCAAATTTAAATTGTAGATTCGTGGCATGCTAAGAGGCCATATGTGTAAGGTTTAGGCTTACAAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGGTCATGATATTTGTTGCCATTGTTGTTGGTGCTAGATAAACTACCCTAATATTGTGGCAAGTCAAAAGGCATCATCAGCCATAGTGGAAACTAAAGGAACAGCAGAGAGCGGCAAAGCTGGTGGCAAGGTTCCTCAAAGTTCTAATTCTACACAGAAAGTGTGGACTTGTGCTTTATGTTCGGTAACAGCTACAAGCAAGAAAGACTTGAATTCCCACCTTAATGGGAGGAAACACAGAGATGCTAGTGAAGCAGCTTTGAAAGCAAAGAAACAACTTGCTCTGCAGAAGCTGAAAAATTATCAGTCCAAAGAAGAGGTGAATCAGCTAAATGTTAGCAATAAGCTAAATTCTAATGTCAAGAATGGAGAAGATATTCTTAACAAAGGGTTGAAGGGAACAGTGATGATGGATGATAAGGTGCAAAAACTGCAAAAGAAGGTGCAAAAACTGCAAAAGAACCTGTGTGAGCCTGTTGGGATGCATAATTCCAAATTAATATGTAGTGTCTGTAATGTTGTCCTTCATTGTGAGGCCAATGTGGCCTCTCACTTAAATGGGAAGATGCATTTGGCTAAAATGCAAAGCAAAGTTGATAGATTAAATAACCTTAGGGACATTTGCACTGCTTGA

Protein sequence

>MS.gene068010.t1

MASSWFLKLAFKCLYHFAWPLFALVYPMCASVQAIETDSYAETKDLISYWILLSLIYLFEYAFMSLLLRFHLWPYVKLMIIFWLIIPDFGRASYIYNKLISSMKPQVVTWRLNNYWRKWFCKKDNFLMHAEKYMKENGTEALEKLIANKNTMCRSDAEATNEIMATDNKEMLKTNGERLQIEHKDIKDLEAIEKKEIPATKQDIPVMPKIGPSQNASSATVETKGTAEINKAGGEVSQSSTQKEVQKEWTCALCLVTTSSEKTLNCHLGGKKHRDSVETLISKKQPTLHKQKDAKVTNKIIAIDNKEIVKTNGERLQTENKGIKDLEAIEKKEIPATKQINYPNIVASQKASSAIVETKGTAESGKAGGKVPQSSNSTQKVWTCALCSVTATSKKDLNSHLNGRKHRDASEAALKAKKQLALQKLKNYQSKEEVNQLNVSNKLNSNVKNGEDILNKGLKGTVMMDDKVQKLQKKVQKLQKNLCEPVGMHNSKLICSVCNVVLHCEANVASHLNGKMHLAKMQSKVDRLNNLRDICTA