Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene069065.t1 | XP_013449168.1 | 98.6 | 72 | 1 | 0 | 1 | 72 | 1 | 72 | 4.20E-29 | 136.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene069065.t1 | A0A072UBG8 | 98.6 | 72 | 1 | 0 | 1 | 72 | 1 | 72 | 3.0e-29 | 136.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049166 | MS.gene069065 | 0.819561 | 1.09E-52 | -1.69E-46 |
| MS.gene049756 | MS.gene069065 | 0.812224 | 4.72E-51 | -1.69E-46 |
| MS.gene049861 | MS.gene069065 | 0.805564 | 1.26E-49 | -1.69E-46 |
| MS.gene050277 | MS.gene069065 | 0.805165 | 1.52E-49 | -1.69E-46 |
| MS.gene050317 | MS.gene069065 | 0.852469 | 4.52E-61 | -1.69E-46 |
| MS.gene050320 | MS.gene069065 | 0.850961 | 1.21E-60 | -1.69E-46 |
| MS.gene050752 | MS.gene069065 | 0.842659 | 2.26E-58 | -1.69E-46 |
| MS.gene050955 | MS.gene069065 | 0.827627 | 1.41E-54 | -1.69E-46 |
| MS.gene051003 | MS.gene069065 | 0.807437 | 5.06E-50 | -1.69E-46 |
| MS.gene051245 | MS.gene069065 | 0.806103 | 9.68E-50 | -1.69E-46 |
| MS.gene051451 | MS.gene069065 | 0.822059 | 2.90E-53 | -1.69E-46 |
| MS.gene051748 | MS.gene069065 | 0.822672 | 2.09E-53 | -1.69E-46 |
| MS.gene051756 | MS.gene069065 | 0.82304 | 1.72E-53 | -1.69E-46 |
| MS.gene05188 | MS.gene069065 | 0.806061 | 9.88E-50 | -1.69E-46 |
| MS.gene051903 | MS.gene069065 | 0.84707 | 1.46E-59 | -1.69E-46 |
| MS.gene051975 | MS.gene069065 | 0.82827 | 9.87E-55 | -1.69E-46 |
| MS.gene052434 | MS.gene069065 | 0.833487 | 5.18E-56 | -1.69E-46 |
| MS.gene052818 | MS.gene069065 | -0.834584 | 2.75E-56 | -1.69E-46 |
| MS.gene053109 | MS.gene069065 | 0.82935 | 5.41E-55 | -1.69E-46 |
| MS.gene053298 | MS.gene069065 | 0.808457 | 3.07E-50 | -1.69E-46 |
| MS.gene05344 | MS.gene069065 | -0.804042 | 2.61E-49 | -1.69E-46 |
| MS.gene053952 | MS.gene069065 | 0.800198 | 1.61E-48 | -1.69E-46 |
| MS.gene054403 | MS.gene069065 | 0.842265 | 2.87E-58 | -1.69E-46 |
| MS.gene05469 | MS.gene069065 | 0.825139 | 5.52E-54 | -1.69E-46 |
| MS.gene055603 | MS.gene069065 | 0.808679 | 2.75E-50 | -1.69E-46 |
| MS.gene056752 | MS.gene069065 | 0.805602 | 1.23E-49 | -1.69E-46 |
| MS.gene056787 | MS.gene069065 | 0.824344 | 8.50E-54 | -1.69E-46 |
| MS.gene056986 | MS.gene069065 | 0.844775 | 6.14E-59 | -1.69E-46 |
| MS.gene057094 | MS.gene069065 | 0.805392 | 1.36E-49 | -1.69E-46 |
| MS.gene057140 | MS.gene069065 | 0.814134 | 1.80E-51 | -1.69E-46 |
| MS.gene057234 | MS.gene069065 | 0.841312 | 5.13E-58 | -1.69E-46 |
| MS.gene05781 | MS.gene069065 | 0.833316 | 5.72E-56 | -1.69E-46 |
| MS.gene057890 | MS.gene069065 | -0.805798 | 1.12E-49 | -1.69E-46 |
| MS.gene057999 | MS.gene069065 | 0.881282 | 2.73E-70 | -1.69E-46 |
| MS.gene058074 | MS.gene069065 | 0.809821 | 1.57E-50 | -1.69E-46 |
| MS.gene058238 | MS.gene069065 | 0.853272 | 2.67E-61 | -1.69E-46 |
| MS.gene059146 | MS.gene069065 | 0.804069 | 2.58E-49 | -1.69E-46 |
| MS.gene059360 | MS.gene069065 | 0.81789 | 2.61E-52 | -1.69E-46 |
| MS.gene059830 | MS.gene069065 | 0.813407 | 2.60E-51 | -1.69E-46 |
| MS.gene059872 | MS.gene069065 | -0.830517 | 2.81E-55 | -1.69E-46 |
| MS.gene06010 | MS.gene069065 | 0.816778 | 4.64E-52 | -1.69E-46 |
| MS.gene06011 | MS.gene069065 | 0.86088 | 1.52E-63 | -1.69E-46 |
| MS.gene060586 | MS.gene069065 | 0.823578 | 1.28E-53 | -1.69E-46 |
| MS.gene060763 | MS.gene069065 | 0.809605 | 1.74E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene069065.t1 | MTR_7g068940 | 98.611 | 72 | 1 | 0 | 1 | 72 | 1 | 72 | 3.21e-48 | 147 |
| MS.gene069065.t1 | MTR_7g068940 | 97.872 | 47 | 1 | 0 | 1 | 47 | 1 | 47 | 1.28e-28 | 97.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene069065.t1 | AT5G01350 | 55.882 | 68 | 30 | 0 | 2 | 69 | 3 | 70 | 4.12e-22 | 81.3 |
Find 10 sgRNAs with CRISPR-Local
Find 264 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTCAATGAAGTGGTTGTTAA+TGG | 0.300803 | 7.2:-34718402 | MS.gene069065:CDS |
| AGTGAGGACATCAAAGAATA+TGG | 0.394875 | 7.2:-34715401 | MS.gene069065:CDS |
| TTGTTAATGGTCTTGCCAAC+AGG | 0.450630 | 7.2:-34718389 | MS.gene069065:intron |
| AGAGTTAGCTGAGCAGATAA+AGG | 0.452139 | 7.2:-34715270 | MS.gene069065:CDS |
| ACTGCAAACCTCTGAAATGC+AGG | 0.473854 | 7.2:+34715421 | None:intergenic |
| CTCTTACTTTGTCAATGAAG+TGG | 0.484729 | 7.2:-34718412 | MS.gene069065:CDS |
| TTCGCAGCCCTGCATTTCAG+AGG | 0.564752 | 7.2:-34715429 | MS.gene069065:intron |
| ACAAATGAAAGAATCACTGC+TGG | 0.590287 | 7.2:+34715130 | None:intergenic |
| CATTTCAGAGGTTTGCAGTG+AGG | 0.594381 | 7.2:-34715417 | MS.gene069065:CDS |
| CTGCAAACCTCTGAAATGCA+GGG | 0.596012 | 7.2:+34715422 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAATGTATTTCAAAATTA+AGG | + | chr7.2:34715537-34715556 | None:intergenic | 10.0% |
| !!! | AATATTTTTTATTTTCAGAT+AGG | - | chr7.2:34717713-34717732 | MS.gene069065:intron | 10.0% |
| !! | GATCATAAATACAATTATTA+GGG | + | chr7.2:34717924-34717943 | None:intergenic | 15.0% |
| !! | TGATCATAAATACAATTATT+AGG | + | chr7.2:34717925-34717944 | None:intergenic | 15.0% |
| !! | TGCTGTATTAATAATTATAT+TGG | + | chr7.2:34715673-34715692 | None:intergenic | 15.0% |
| !! | AATTGAAACAATCATATAAC+TGG | + | chr7.2:34715305-34715324 | None:intergenic | 20.0% |
| !! | ACTATACATATATTATTCAC+AGG | + | chr7.2:34715901-34715920 | None:intergenic | 20.0% |
| !! | ATAATTATTAATACAGCACA+GGG | - | chr7.2:34715675-34715694 | MS.gene069065:intron | 20.0% |
| !! | ATATAAAAAAAATCACCTGT+TGG | + | chr7.2:34715216-34715235 | None:intergenic | 20.0% |
| !! | ATGGAAGAAATTTCAAAAAA+GGG | - | chr7.2:34718205-34718224 | MS.gene069065:intron | 20.0% |
| !! | CAAAAATGAGAATCTTATAT+GGG | + | chr7.2:34717973-34717992 | None:intergenic | 20.0% |
| !! | CTATACATATATTATTCACA+GGG | + | chr7.2:34715900-34715919 | None:intergenic | 20.0% |
| !! | GTCATTAGTAATAAGTTTAT+AGG | - | chr7.2:34715982-34716001 | MS.gene069065:intron | 20.0% |
| !! | GTTATATCAAAAACCATATT+TGG | + | chr7.2:34717505-34717524 | None:intergenic | 20.0% |
| !! | TAATATATGTATAGTGGTAT+TGG | - | chr7.2:34715906-34715925 | MS.gene069065:intron | 20.0% |
| !! | TATAATTATTAATACAGCAC+AGG | - | chr7.2:34715674-34715693 | MS.gene069065:intron | 20.0% |
| !! | TATGGAAGAAATTTCAAAAA+AGG | - | chr7.2:34718204-34718223 | MS.gene069065:intron | 20.0% |
| !! | TGTGAATAATATATGTATAG+TGG | - | chr7.2:34715900-34715919 | MS.gene069065:intron | 20.0% |
| !!! | AAATTGATTTTAAGCTTCTA+AGG | - | chr7.2:34716048-34716067 | MS.gene069065:intron | 20.0% |
| !!! | TTATTGTTGTTCTTAAATTC+TGG | + | chr7.2:34716188-34716207 | None:intergenic | 20.0% |
| !!! | TTTTAATTGCAGAAAAAACT+TGG | - | chr7.2:34715554-34715573 | MS.gene069065:intron | 20.0% |
| ! | AACATTAACATTAGAAGTGA+TGG | + | chr7.2:34718128-34718147 | None:intergenic | 25.0% |
| ! | AAGGAAGAATATGAAAAAGA+AGG | + | chr7.2:34716441-34716460 | None:intergenic | 25.0% |
| ! | ACAATTATTAGGGAGAAAAT+TGG | + | chr7.2:34717914-34717933 | None:intergenic | 25.0% |
| ! | AGAAGTTGGATATCTTATTA+TGG | - | chr7.2:34716148-34716167 | MS.gene069065:intron | 25.0% |
| ! | AGAGTTATATAGGAATGTTT+AGG | + | chr7.2:34716364-34716383 | None:intergenic | 25.0% |
| ! | ATATCTAAACCGTGTAATTT+GGG | + | chr7.2:34716984-34717003 | None:intergenic | 25.0% |
| ! | CAAAATTAAGGTGAAAGTTA+TGG | + | chr7.2:34715525-34715544 | None:intergenic | 25.0% |
| ! | CAATTATTAGGGAGAAAATT+GGG | + | chr7.2:34717913-34717932 | None:intergenic | 25.0% |
| ! | CTAATGTTAATGTTTCATTG+TGG | - | chr7.2:34718134-34718153 | MS.gene069065:intron | 25.0% |
| ! | CTCTAAGTTCACATTATTAT+TGG | - | chr7.2:34717996-34718015 | MS.gene069065:intron | 25.0% |
| ! | GAACTTGTAAAATCTGTTAT+GGG | + | chr7.2:34716323-34716342 | None:intergenic | 25.0% |
| ! | GAAGTTGGATATCTTATTAT+GGG | - | chr7.2:34716149-34716168 | MS.gene069065:intron | 25.0% |
| ! | GCAAAAATGAGAATCTTATA+TGG | + | chr7.2:34717974-34717993 | None:intergenic | 25.0% |
| ! | TATACTATAACATTGTCATG+TGG | - | chr7.2:34715603-34715622 | MS.gene069065:intron | 25.0% |
| !! | CACATTATTATTGGCTATTA+AGG | - | chr7.2:34718005-34718024 | MS.gene069065:intron | 25.0% |
| !! | CTTTGTAACAATTATTTTCG+TGG | + | chr7.2:34716680-34716699 | None:intergenic | 25.0% |
| !! | TGGTTTTTGATATAACACTA+TGG | - | chr7.2:34717509-34717528 | MS.gene069065:intron | 25.0% |
| !! | TTTACAGTTTTTGCTACAAT+AGG | - | chr7.2:34717882-34717901 | MS.gene069065:intron | 25.0% |
| !! | TTTATAGGTCTTGTGATAAA+TGG | - | chr7.2:34715997-34716016 | MS.gene069065:intron | 25.0% |
| !!! | TAGAAAAGTTGGTAGAAAAT+AGG | - | chr7.2:34717323-34717342 | MS.gene069065:intron | 25.0% |
| !!! | TGTATTACCTCCATTTTTTT+CGG | + | chr7.2:34718348-34718367 | None:intergenic | 25.0% |
| !!! | TTTTTGAGATTGTGATTGTA+AGG | - | chr7.2:34715274-34715293 | MS.gene069065:CDS | 25.0% |
| AAAAGACAACAGAAAGAAGT+TGG | - | chr7.2:34716134-34716153 | MS.gene069065:intron | 30.0% | |
| AAACATCATTAGTCGATGAT+TGG | - | chr7.2:34715473-34715492 | MS.gene069065:intron | 30.0% | |
| AACCATTCGAAAAGATTTAG+AGG | - | chr7.2:34717465-34717484 | MS.gene069065:intron | 30.0% | |
| AATTCAAAAGCAGGAAAACT+TGG | + | chr7.2:34718041-34718060 | None:intergenic | 30.0% | |
| ACCAAAATCTAAGAAATTGG+AGG | + | chr7.2:34715353-34715372 | None:intergenic | 30.0% | |
| AGAATCTTATATGGGATGAA+TGG | + | chr7.2:34717965-34717984 | None:intergenic | 30.0% | |
| AGACCATATTAGAGTAGTTT+AGG | - | chr7.2:34717619-34717638 | MS.gene069065:intron | 30.0% | |
| ATACACGTGTTAACAGAAAT+TGG | + | chr7.2:34715815-34715834 | None:intergenic | 30.0% | |
| ATATCATACCCCAAATTACA+CGG | - | chr7.2:34716972-34716991 | MS.gene069065:intron | 30.0% | |
| ATGAAAAATAGCTGAACACT+AGG | - | chr7.2:34716240-34716259 | MS.gene069065:intron | 30.0% | |
| ATTACACGGTTTAGATATCT+TGG | - | chr7.2:34716986-34717005 | MS.gene069065:intron | 30.0% | |
| ATTGTTTCAATTGAGAGAGA+GGG | - | chr7.2:34715313-34715332 | MS.gene069065:intron | 30.0% | |
| CAAGACTACATCATCTAATT+TGG | + | chr7.2:34716792-34716811 | None:intergenic | 30.0% | |
| CCTAATATGGATTCAAATGT+AGG | + | chr7.2:34716488-34716507 | None:intergenic | 30.0% | |
| CCTACATTTGAATCCATATT+AGG | - | chr7.2:34716485-34716504 | MS.gene069065:intron | 30.0% | |
| CTTCAAAGCACAATGAAAAT+TGG | + | chr7.2:34716768-34716787 | None:intergenic | 30.0% | |
| GATATCTAAACCGTGTAATT+TGG | + | chr7.2:34716985-34717004 | None:intergenic | 30.0% | |
| GATATCTTATTATGGGTGTT+AGG | - | chr7.2:34716156-34716175 | MS.gene069065:intron | 30.0% | |
| GGAACTTGTAAAATCTGTTA+TGG | + | chr7.2:34716324-34716343 | None:intergenic | 30.0% | |
| TATCTAAACCGTGTAATTTG+GGG | + | chr7.2:34716983-34717002 | None:intergenic | 30.0% | |
| TATTGACCATGTGAACAAAT+CGG | - | chr7.2:34718253-34718272 | MS.gene069065:intron | 30.0% | |
| TCCTTAGATAATTCAAAAGC+AGG | + | chr7.2:34718050-34718069 | None:intergenic | 30.0% | |
| TCTCAACTCTCTAATATTGA+CGG | + | chr7.2:34716640-34716659 | None:intergenic | 30.0% | |
| TGAAAAATAGCTGAACACTA+GGG | - | chr7.2:34716241-34716260 | MS.gene069065:intron | 30.0% | |
| TGAAATGTAACTTCAGCAAA+AGG | - | chr7.2:34716912-34716931 | MS.gene069065:intron | 30.0% | |
| TGACTGAAAGAGAGTTATAT+AGG | + | chr7.2:34716374-34716393 | None:intergenic | 30.0% | |
| TGTAAGAAGAGTAGATCAAA+TGG | - | chr7.2:34717390-34717409 | MS.gene069065:intron | 30.0% | |
| TTACACGGTTTAGATATCTT+GGG | - | chr7.2:34716987-34717006 | MS.gene069065:intron | 30.0% | |
| TTAGAAATCAGAACACACAT+AGG | - | chr7.2:34716090-34716109 | MS.gene069065:intron | 30.0% | |
| TTCAAAAGAAGGAATCTGAT+TGG | - | chr7.2:34716533-34716552 | MS.gene069065:intron | 30.0% | |
| TTGATCTACTCTTCTTACAA+CGG | + | chr7.2:34717389-34717408 | None:intergenic | 30.0% | |
| TTGTAAAATCTGTTATGGGA+GGG | + | chr7.2:34716319-34716338 | None:intergenic | 30.0% | |
| ! | AATTATATTGGCTGCAATAG+TGG | + | chr7.2:34715661-34715680 | None:intergenic | 30.0% |
| ! | ATAGGACGTTTTTCTCTTAA+TGG | - | chr7.2:34717731-34717750 | MS.gene069065:intron | 30.0% |
| ! | GTAAGAGCATAGACTATAAT+AGG | - | chr7.2:34716736-34716755 | MS.gene069065:intron | 30.0% |
| ! | GTTTCTCTAATGGTTTTCTT+AGG | + | chr7.2:34717448-34717467 | None:intergenic | 30.0% |
| ! | TCCAATTTCTTAGATTTTGG+TGG | - | chr7.2:34715352-34715371 | MS.gene069065:intron | 30.0% |
| ! | TCTACCAACTTTTCTACTAT+AGG | + | chr7.2:34717319-34717338 | None:intergenic | 30.0% |
| ! | TTTTCGAATGGTTTCTCTAA+TGG | + | chr7.2:34717458-34717477 | None:intergenic | 30.0% |
| !! | CAATTTCTTAGATTTTGGTG+GGG | - | chr7.2:34715354-34715373 | MS.gene069065:intron | 30.0% |
| !! | CCAATTTCTTAGATTTTGGT+GGG | - | chr7.2:34715353-34715372 | MS.gene069065:intron | 30.0% |
| !! | TCCTGCTTTTGAATTATCTA+AGG | - | chr7.2:34718046-34718065 | MS.gene069065:intron | 30.0% |
| AAAGACGGTTGATCATATGA+AGG | + | chr7.2:34717808-34717827 | None:intergenic | 35.0% | |
| AAAGGACCTTCCGAAAAAAA+TGG | - | chr7.2:34718335-34718354 | MS.gene069065:intron | 35.0% | |
| AACTTTCCTTTCAGCTTAAG+TGG | + | chr7.2:34717121-34717140 | None:intergenic | 35.0% | |
| AAGAAGAGTAGATCAAATGG+AGG | - | chr7.2:34717393-34717412 | MS.gene069065:intron | 35.0% | |
| ACTATAACATTGTCATGTGG+TGG | - | chr7.2:34715606-34715625 | MS.gene069065:intron | 35.0% | |
| AGATTTAGAGGTCAATGAGT+TGG | - | chr7.2:34717477-34717496 | MS.gene069065:intron | 35.0% | |
| AGCACCTATAGTAGAAAAGT+TGG | - | chr7.2:34717312-34717331 | MS.gene069065:intron | 35.0% | |
| AGCTGAAAGGAAAGTTCTAT+CGG | - | chr7.2:34717125-34717144 | MS.gene069065:intron | 35.0% | |
| AGTCCAATAGTTAGAGATAG+AGG | + | chr7.2:34717783-34717802 | None:intergenic | 35.0% | |
| AGTGAGGACATCAAAGAATA+TGG | - | chr7.2:34718186-34718205 | MS.gene069065:intron | 35.0% | |
| ATTGACCATGTGAACAAATC+GGG | - | chr7.2:34718254-34718273 | MS.gene069065:intron | 35.0% | |
| CCCACCAAAATCTAAGAAAT+TGG | + | chr7.2:34715356-34715375 | None:intergenic | 35.0% | |
| CTCTTACTTTGTCAATGAAG+TGG | - | chr7.2:34715175-34715194 | MS.gene069065:intron | 35.0% | |
| CTTATTATGGGTGTTAGGTA+GGG | - | chr7.2:34716161-34716180 | MS.gene069065:intron | 35.0% | |
| CTTGTAAAATCTGTTATGGG+AGG | + | chr7.2:34716320-34716339 | None:intergenic | 35.0% | |
| GAAAATAGGCTTAGATGGTT+TGG | - | chr7.2:34717337-34717356 | MS.gene069065:intron | 35.0% | |
| GAGCCTAAACTACTCTAATA+TGG | + | chr7.2:34717625-34717644 | None:intergenic | 35.0% | |
| GATTGTTTCAATTGAGAGAG+AGG | - | chr7.2:34715312-34715331 | MS.gene069065:intron | 35.0% | |
| GTCAATGAAGTGGTTGTTAA+TGG | - | chr7.2:34715185-34715204 | MS.gene069065:intron | 35.0% | |
| GTCCAATAGTTAGAGATAGA+GGG | + | chr7.2:34717782-34717801 | None:intergenic | 35.0% | |
| TACATCATCGTATTCAAGCT+GGG | - | chr7.2:34717047-34717066 | MS.gene069065:intron | 35.0% | |
| TATAGGAATGTTTAGGAGAG+AGG | + | chr7.2:34716357-34716376 | None:intergenic | 35.0% | |
| TCGATGATTGGTGTGAAAAA+TGG | - | chr7.2:34715485-34715504 | MS.gene069065:intron | 35.0% | |
| TCTTATTATGGGTGTTAGGT+AGG | - | chr7.2:34716160-34716179 | MS.gene069065:intron | 35.0% | |
| TGCACAAGATAAGAAGGATA+AGG | + | chr7.2:34716617-34716636 | None:intergenic | 35.0% | |
| TGCAGAAAAAACTTGGCATT+AGG | - | chr7.2:34715561-34715580 | MS.gene069065:intron | 35.0% | |
| TGGTAGAAAATAGGCTTAGA+TGG | - | chr7.2:34717332-34717351 | MS.gene069065:intron | 35.0% | |
| TTTGAACCCATCTACATTGT+AGG | + | chr7.2:34716519-34716538 | None:intergenic | 35.0% | |
| ! | AAACTGTAAAGTGCCATCTT+AGG | + | chr7.2:34717872-34717891 | None:intergenic | 35.0% |
| ! | AAAGTACCACTTAAGCTGAA+AGG | - | chr7.2:34717112-34717131 | MS.gene069065:intron | 35.0% |
| ! | ATGTAGATGGGTTCAAAAGA+AGG | - | chr7.2:34716522-34716541 | MS.gene069065:intron | 35.0% |
| ! | CAATGAGTTGGATCCAAATA+TGG | - | chr7.2:34717489-34717508 | MS.gene069065:intron | 35.0% |
| ! | GACCTCTAAATCTTTTCGAA+TGG | + | chr7.2:34717470-34717489 | None:intergenic | 35.0% |
| ! | GCCTCCAATTTCTTAGATTT+TGG | - | chr7.2:34715349-34715368 | MS.gene069065:intron | 35.0% |
| ! | GTACATCAGCTTCTATTTCT+CGG | + | chr7.2:34717030-34717049 | None:intergenic | 35.0% |
| ! | TTAGATGATGTAGTCTTGCT+TGG | - | chr7.2:34716794-34716813 | MS.gene069065:intron | 35.0% |
| !! | AGTAGTTTAGGCTCTAAACT+AGG | - | chr7.2:34717631-34717650 | MS.gene069065:intron | 35.0% |
| !! | GGTTGACTTTTGTGTTATTC+TGG | - | chr7.2:34718275-34718294 | MS.gene069065:intron | 35.0% |
| !! | TTCTCGGTCATTTTGTACTA+TGG | + | chr7.2:34717014-34717033 | None:intergenic | 35.0% |
| !!! | TGGTGGCAATTTTTTGCATA+GGG | - | chr7.2:34715148-34715167 | MS.gene069065:intron | 35.0% |
| !!! | TTACCTCCATTTTTTTCGGA+AGG | + | chr7.2:34718344-34718363 | None:intergenic | 35.0% |
| AACTTCAGCAAAAGGAGAAG+TGG | - | chr7.2:34716920-34716939 | MS.gene069065:intron | 40.0% | |
| ACAAGCATGTGAATCTAACG+AGG | + | chr7.2:34715435-34715454 | None:intergenic | 40.0% | |
| AGAGTTAGCTGAGCAGATAA+AGG | - | chr7.2:34718317-34718336 | MS.gene069065:intron | 40.0% | |
| AGGTTAAAAGAGGTAGAGGA+AGG | - | chr7.2:34717422-34717441 | MS.gene069065:intron | 40.0% | |
| AGTCAGGTTAAAAGAGGTAG+AGG | - | chr7.2:34717418-34717437 | MS.gene069065:intron | 40.0% | |
| ATGTGTGGAAGGTTTGCATA+AGG | + | chr7.2:34716460-34716479 | None:intergenic | 40.0% | |
| CATAGAACCAGATGCAAAGA+CGG | + | chr7.2:34717823-34717842 | None:intergenic | 40.0% | |
| CGTGTTAACAGAAATTGGAC+AGG | + | chr7.2:34715810-34715829 | None:intergenic | 40.0% | |
| CTATTCCACCTAGTAGGATA+AGG | + | chr7.2:34717672-34717691 | None:intergenic | 40.0% | |
| CTCCCTCTATCTCTAACTAT+TGG | - | chr7.2:34717777-34717796 | MS.gene069065:intron | 40.0% | |
| CTTATCCTACTAGGTGGAAT+AGG | - | chr7.2:34717670-34717689 | MS.gene069065:intron | 40.0% | |
| GAGGGTAATAAGTACTCTCA+AGG | + | chr7.2:34716301-34716320 | None:intergenic | 40.0% | |
| GCAATAGTGGTGCAATGTAT+AGG | + | chr7.2:34715648-34715667 | None:intergenic | 40.0% | |
| GTACATCATCGTATTCAAGC+TGG | - | chr7.2:34717046-34717065 | MS.gene069065:intron | 40.0% | |
| GTGAGTCAAAACTCAGAACA+CGG | + | chr7.2:34715847-34715866 | None:intergenic | 40.0% | |
| GTGATGGTAATAAGCACACA+AGG | + | chr7.2:34718112-34718131 | None:intergenic | 40.0% | |
| TAAAACTGTTATTCCCCCCA+GGG | - | chr7.2:34715705-34715724 | MS.gene069065:intron | 40.0% | |
| TAGGAGAGAGGAATCATTCT+AGG | + | chr7.2:34716345-34716364 | None:intergenic | 40.0% | |
| TATGGATTCAAATGTAGGCC+TGG | + | chr7.2:34716483-34716502 | None:intergenic | 40.0% | |
| TGAATCCATATTAGGACCTC+TGG | - | chr7.2:34716493-34716512 | MS.gene069065:intron | 40.0% | |
| TTAAAACTGTTATTCCCCCC+AGG | - | chr7.2:34715704-34715723 | MS.gene069065:intron | 40.0% | |
| ! | AGCATTGCTCTGTGTCATTA+AGG | + | chr7.2:34716278-34716297 | None:intergenic | 40.0% |
| ! | ATTAACAGAGCATCCAACAG+AGG | + | chr7.2:34715871-34715890 | None:intergenic | 40.0% |
| ! | ATTGGCTATTAAGGTGCTCA+TGG | - | chr7.2:34718014-34718033 | MS.gene069065:intron | 40.0% |
| ! | CAACTAAGCCTTATCCTACT+AGG | - | chr7.2:34717661-34717680 | MS.gene069065:intron | 40.0% |
| ! | GAAAAAGAAGGAGCATGATG+AGG | + | chr7.2:34716429-34716448 | None:intergenic | 40.0% |
| ! | GAACACACATAGGAAAGCAT+AGG | - | chr7.2:34716100-34716119 | MS.gene069065:intron | 40.0% |
| ! | TTGGCTATTAAGGTGCTCAT+GGG | - | chr7.2:34718015-34718034 | MS.gene069065:intron | 40.0% |
| ! | TTGTTAATGGTCTTGCCAAC+AGG | - | chr7.2:34715198-34715217 | MS.gene069065:intron | 40.0% |
| !! | AAGGAATCTGATTGGTTCTG+TGG | - | chr7.2:34716541-34716560 | MS.gene069065:intron | 40.0% |
| !! | GTCTTTGCATCTGGTTCTAT+GGG | - | chr7.2:34717822-34717841 | MS.gene069065:intron | 40.0% |
| !!! | CTGGTGGCAATTTTTTGCAT+AGG | - | chr7.2:34715147-34715166 | MS.gene069065:intron | 40.0% |
| AAGGAGAAGTGGATCTACCT+TGG | - | chr7.2:34716931-34716950 | MS.gene069065:intron | 45.0% | |
| AAGTGCCATCTTAGGTGGTT+CGG | + | chr7.2:34717864-34717883 | None:intergenic | 45.0% | |
| ACACCATTAGAGAGAGAGTG+GGG | - | chr7.2:34717287-34717306 | MS.gene069065:intron | 45.0% | |
| ACCGGCAATGTTGTATGGTA+CGG | - | chr7.2:34717159-34717178 | MS.gene069065:intron | 45.0% | |
| ACTAGGTGGAATAGGCTTTG+TGG | - | chr7.2:34717678-34717697 | MS.gene069065:intron | 45.0% | |
| AGATCAAATGGAGGAGAGTC+AGG | - | chr7.2:34717402-34717421 | MS.gene069065:intron | 45.0% | |
| AGGCAAGCCTTAGAAACGTA+TGG | - | chr7.2:34716857-34716876 | MS.gene069065:intron | 45.0% | |
| ATCATCGTATTCAAGCTGGG+TGG | - | chr7.2:34717050-34717069 | MS.gene069065:intron | 45.0% | |
| ATCTCCAACTTTCACCTCCA+AGG | + | chr7.2:34716951-34716970 | None:intergenic | 45.0% | |
| CAAAGCCTATTCCACCTAGT+AGG | + | chr7.2:34717678-34717697 | None:intergenic | 45.0% | |
| CATTTCAGAGGTTTGCAGTG+AGG | - | chr7.2:34718170-34718189 | MS.gene069065:intron | 45.0% | |
| CGAGAGTAAAGTAAGCGTAG+CGG | - | chr7.2:34717207-34717226 | MS.gene069065:intron | 45.0% | |
| CGCTTACTTTACTCTCGTGT+TGG | + | chr7.2:34717204-34717223 | None:intergenic | 45.0% | |
| CTCTGGCCTACAATGTAGAT+GGG | - | chr7.2:34716510-34716529 | MS.gene069065:intron | 45.0% | |
| CTGATGACAAACATGAGGCT+TGG | + | chr7.2:34715765-34715784 | None:intergenic | 45.0% | |
| CTTATCGCACAAAACACCTG+AGG | + | chr7.2:34717092-34717111 | None:intergenic | 45.0% | |
| GACACCATTAGAGAGAGAGT+GGG | - | chr7.2:34717286-34717305 | MS.gene069065:intron | 45.0% | |
| GAGGAGAGTCAGGTTAAAAG+AGG | - | chr7.2:34717412-34717431 | MS.gene069065:intron | 45.0% | |
| GATGAGTGGTAAGACTAGAC+AGG | - | chr7.2:34717249-34717268 | MS.gene069065:intron | 45.0% | |
| GGACCTTCCGAAAAAAATGG+AGG | - | chr7.2:34718338-34718357 | MS.gene069065:intron | 45.0% | |
| GTGGTAAGACTAGACAGGAT+AGG | - | chr7.2:34717254-34717273 | MS.gene069065:intron | 45.0% | |
| TCCGTACCATACAACATTGC+CGG | + | chr7.2:34717163-34717182 | None:intergenic | 45.0% | |
| TCTACCTTGGAGGTGAAAGT+TGG | - | chr7.2:34716944-34716963 | MS.gene069065:intron | 45.0% | |
| TCTTCTTACAACGGCGTCTA+CGG | + | chr7.2:34717380-34717399 | None:intergenic | 45.0% | |
| TGACACCATTAGAGAGAGAG+TGG | - | chr7.2:34717285-34717304 | MS.gene069065:intron | 45.0% | |
| TGACGGTGCACAAGATAAGA+AGG | + | chr7.2:34716623-34716642 | None:intergenic | 45.0% | |
| TGATCAACCGTCTTTGCATC+TGG | - | chr7.2:34717813-34717832 | MS.gene069065:intron | 45.0% | |
| TGTTGTATGGTACGGAGTGT+TGG | - | chr7.2:34717167-34717186 | MS.gene069065:intron | 45.0% | |
| TTCAAGCTGGGTGGTTGAAA+TGG | - | chr7.2:34717059-34717078 | MS.gene069065:intron | 45.0% | |
| TTGAAATGGACAAGAGCCTC+AGG | - | chr7.2:34717073-34717092 | MS.gene069065:intron | 45.0% | |
| ! | AAAGAAGGAGCATGATGAGG+TGG | + | chr7.2:34716426-34716445 | None:intergenic | 45.0% |
| ! | AAGCCTTATCCCACTATGTG+GGG | + | chr7.2:34717558-34717577 | None:intergenic | 45.0% |
| ! | CAAGCCTTATCCCACTATGT+GGG | + | chr7.2:34717559-34717578 | None:intergenic | 45.0% |
| ! | CAGTCATGTGCTGCTCAATT+TGG | - | chr7.2:34716388-34716407 | MS.gene069065:intron | 45.0% |
| ! | CTAAGCCTTATCCTACTAGG+TGG | - | chr7.2:34717664-34717683 | MS.gene069065:intron | 45.0% |
| ! | CTGTAAAGTGCCATCTTAGG+TGG | + | chr7.2:34717869-34717888 | None:intergenic | 45.0% |
| ! | GTCAACCCGATTTGTTCACA+TGG | + | chr7.2:34718262-34718281 | None:intergenic | 45.0% |
| ! | GTGTGCTGATGACAAACATG+AGG | + | chr7.2:34715770-34715789 | None:intergenic | 45.0% |
| ! | GTTGTATGGTACGGAGTGTT+GGG | - | chr7.2:34717168-34717187 | MS.gene069065:intron | 45.0% |
| !! | ACTGCAAACCTCTGAAATGC+AGG | + | chr7.2:34718169-34718188 | None:intergenic | 45.0% |
| !! | CGTCTTTGCATCTGGTTCTA+TGG | - | chr7.2:34717821-34717840 | MS.gene069065:intron | 45.0% |
| !! | CTGCAAACCTCTGAAATGCA+GGG | + | chr7.2:34718168-34718187 | None:intergenic | 45.0% |
| ACTCCGTCTTGCTTCTACTC+AGG | + | chr7.2:34716889-34716908 | None:intergenic | 50.0% | |
| AGGATGTTGCGTTGGATGAG+TGG | - | chr7.2:34717235-34717254 | MS.gene069065:intron | 50.0% | |
| AGTCGAGGGAGGAGTTAAAC+GGG | - | chr7.2:34716819-34716838 | MS.gene069065:intron | 50.0% | |
| CAAATGTAGGCCTGGATGTG+TGG | + | chr7.2:34716475-34716494 | None:intergenic | 50.0% | |
| CACCATTAGAGAGAGAGTGG+GGG | - | chr7.2:34717288-34717307 | MS.gene069065:intron | 50.0% | |
| CATGTCCGAACCACCTAAGA+TGG | - | chr7.2:34717856-34717875 | MS.gene069065:intron | 50.0% | |
| CATTGTCATGTGGTGGCTTG+TGG | - | chr7.2:34715613-34715632 | MS.gene069065:intron | 50.0% | |
| CCATCTACATTGTAGGCCAG+AGG | + | chr7.2:34716512-34716531 | None:intergenic | 50.0% | |
| CCTCTGGCCTACAATGTAGA+TGG | - | chr7.2:34716509-34716528 | MS.gene069065:intron | 50.0% | |
| CTTATCCCACTATGTGGGGT+CGG | + | chr7.2:34717554-34717573 | None:intergenic | 50.0% | |
| CTTCTTACAACGGCGTCTAC+GGG | + | chr7.2:34717379-34717398 | None:intergenic | 50.0% | |
| GAGAAGTGGATCTACCTTGG+AGG | - | chr7.2:34716934-34716953 | MS.gene069065:intron | 50.0% | |
| GAGTCGAGGGAGGAGTTAAA+CGG | - | chr7.2:34716818-34716837 | MS.gene069065:intron | 50.0% | |
| GCGGAAGCCATACGTTTCTA+AGG | + | chr7.2:34716867-34716886 | None:intergenic | 50.0% | |
| GTAGGCCAGAGGTCCTAATA+TGG | + | chr7.2:34716501-34716520 | None:intergenic | 50.0% | |
| GTCAGACCGGCAATGTTGTA+TGG | - | chr7.2:34717154-34717173 | MS.gene069065:intron | 50.0% | |
| GTGGTGCAATGTATAGGCTG+CGG | + | chr7.2:34715642-34715661 | None:intergenic | 50.0% | |
| TAAACGGGAGGCTAGAGACT+TGG | - | chr7.2:34716834-34716853 | MS.gene069065:intron | 50.0% | |
| TACCCCCACTCTCTCTCTAA+TGG | + | chr7.2:34717293-34717312 | None:intergenic | 50.0% | |
| TGCAAACCTTCCACACATCC+AGG | - | chr7.2:34716462-34716481 | MS.gene069065:intron | 50.0% | |
| ! | AAGTAAGCGTAGCGGAGATG+AGG | - | chr7.2:34717215-34717234 | MS.gene069065:intron | 50.0% |
| ! | AGTCTTGCTTGGTGAGTCGA+GGG | - | chr7.2:34716805-34716824 | MS.gene069065:intron | 50.0% |
| ! | CCAAGCCTTATCCCACTATG+TGG | + | chr7.2:34717560-34717579 | None:intergenic | 50.0% |
| ! | CCACATAGTGGGATAAGGCT+TGG | - | chr7.2:34717557-34717576 | MS.gene069065:intron | 50.0% |
| ! | TAGTCTTGCTTGGTGAGTCG+AGG | - | chr7.2:34716804-34716823 | MS.gene069065:intron | 50.0% |
| !!! | GTTTTGACTCACGCCTCTGT+TGG | - | chr7.2:34715855-34715874 | MS.gene069065:intron | 50.0% |
| ACTATGTGGGGTCGGCAACA+TGG | + | chr7.2:34717546-34717565 | None:intergenic | 55.0% | |
| AGCAGACTGCAGAGGCAGAA+GGG | - | chr7.2:34716566-34716585 | MS.gene069065:intron | 55.0% | |
| AGGGGGTTGCTTCAAACCCT+GGG | + | chr7.2:34715724-34715743 | None:intergenic | 55.0% | |
| ATGTTGCCGACCCCACATAG+TGG | - | chr7.2:34717545-34717564 | MS.gene069065:intron | 55.0% | |
| CAGACGCAAGACTAGTGAGG+GGG | + | chr7.2:34715741-34715760 | None:intergenic | 55.0% | |
| CCAGACGCAAGACTAGTGAG+GGG | + | chr7.2:34715742-34715761 | None:intergenic | 55.0% | |
| CCGCCTGAGTAGAAGCAAGA+CGG | - | chr7.2:34716883-34716902 | MS.gene069065:intron | 55.0% | |
| CCGTCTTGCTTCTACTCAGG+CGG | + | chr7.2:34716886-34716905 | None:intergenic | 55.0% | |
| CGGAGATGAGGATGTTGCGT+TGG | - | chr7.2:34717227-34717246 | MS.gene069065:intron | 55.0% | |
| CTATCGGACAGCAGTCAGAC+CGG | - | chr7.2:34717141-34717160 | MS.gene069065:intron | 55.0% | |
| GAGCATGATGAGGTGGCAAG+GGG | + | chr7.2:34716419-34716438 | None:intergenic | 55.0% | |
| GCCAGACGCAAGACTAGTGA+GGG | + | chr7.2:34715743-34715762 | None:intergenic | 55.0% | |
| GGAGCATGATGAGGTGGCAA+GGG | + | chr7.2:34716420-34716439 | None:intergenic | 55.0% | |
| GTGCAATGTATAGGCTGCGG+CGG | + | chr7.2:34715639-34715658 | None:intergenic | 55.0% | |
| TGTAGGCCTGGATGTGTGGA+AGG | + | chr7.2:34716471-34716490 | None:intergenic | 55.0% | |
| TGTTGCCGACCCCACATAGT+GGG | - | chr7.2:34717546-34717565 | MS.gene069065:intron | 55.0% | |
| TTCGCAGCCCTGCATTTCAG+AGG | - | chr7.2:34718158-34718177 | MS.gene069065:intron | 55.0% | |
| ! | AGGAGCATGATGAGGTGGCA+AGG | + | chr7.2:34716421-34716440 | None:intergenic | 55.0% |
| ! | AGGCAGAAGGGCATGGCAAT+TGG | - | chr7.2:34716578-34716597 | MS.gene069065:intron | 55.0% |
| ! | CGACCCCACATAGTGGGATA+AGG | - | chr7.2:34717552-34717571 | MS.gene069065:intron | 55.0% |
| !! | GTATGGTACGGAGTGTTGGG+CGG | - | chr7.2:34717171-34717190 | MS.gene069065:intron | 55.0% |
| ACAGGTTGCCAGCCAGCAAC+GGG | + | chr7.2:34715792-34715811 | None:intergenic | 60.0% | |
| ACGGGAGGCTAGAGACTTGG+AGG | - | chr7.2:34716837-34716856 | MS.gene069065:intron | 60.0% | |
| ACTGCAGAGGCAGAAGGGCA+TGG | - | chr7.2:34716571-34716590 | MS.gene069065:intron | 60.0% | |
| CAGCAGACTGCAGAGGCAGA+AGG | - | chr7.2:34716565-34716584 | MS.gene069065:intron | 60.0% | |
| CGAGGGAGGAGTTAAACGGG+AGG | - | chr7.2:34716822-34716841 | MS.gene069065:intron | 60.0% | |
| CTTCTGCCTCTGCAGTCTGC+TGG | + | chr7.2:34716567-34716586 | None:intergenic | 60.0% | |
| GACAGGTTGCCAGCCAGCAA+CGG | + | chr7.2:34715793-34715812 | None:intergenic | 60.0% | |
| GAGGGGGTTGCTTCAAACCC+TGG | + | chr7.2:34715725-34715744 | None:intergenic | 60.0% | |
| GGCCAGACGCAAGACTAGTG+AGG | + | chr7.2:34715744-34715763 | None:intergenic | 60.0% | |
| GGGGGTTGCTTCAAACCCTG+GGG | + | chr7.2:34715723-34715742 | None:intergenic | 60.0% | |
| GGGGTTGCTTCAAACCCTGG+GGG | + | chr7.2:34715722-34715741 | None:intergenic | 60.0% | |
| GGGTTGCTTCAAACCCTGGG+GGG | + | chr7.2:34715721-34715740 | None:intergenic | 60.0% | |
| GTCATCAGCACACCCGTTGC+TGG | - | chr7.2:34715777-34715796 | MS.gene069065:intron | 60.0% | |
| ! | CTTGCTTGGTGAGTCGAGGG+AGG | - | chr7.2:34716808-34716827 | MS.gene069065:intron | 60.0% |
| !! | CCCCTCACTAGTCTTGCGTC+TGG | - | chr7.2:34715739-34715758 | MS.gene069065:intron | 60.0% |
| CTGTGGCCAGCAGACTGCAG+AGG | - | chr7.2:34716558-34716577 | MS.gene069065:intron | 65.0% | |
| TCAGCACACCCGTTGCTGGC+TGG | - | chr7.2:34715781-34715800 | MS.gene069065:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.2 | gene | 34715143 | 34718466 | 34715143 | ID=MS.gene069065 |
| chr7.2 | mRNA | 34715143 | 34718466 | 34715143 | ID=MS.gene069065.t1;Parent=MS.gene069065 |
| chr7.2 | exon | 34718390 | 34718466 | 34718390 | ID=MS.gene069065.t1.exon1;Parent=MS.gene069065.t1 |
| chr7.2 | CDS | 34718390 | 34718466 | 34718390 | ID=cds.MS.gene069065.t1;Parent=MS.gene069065.t1 |
| chr7.2 | exon | 34715383 | 34715444 | 34715383 | ID=MS.gene069065.t1.exon2;Parent=MS.gene069065.t1 |
| chr7.2 | CDS | 34715383 | 34715444 | 34715383 | ID=cds.MS.gene069065.t1;Parent=MS.gene069065.t1 |
| chr7.2 | exon | 34715250 | 34715308 | 34715250 | ID=MS.gene069065.t1.exon3;Parent=MS.gene069065.t1 |
| chr7.2 | CDS | 34715250 | 34715308 | 34715250 | ID=cds.MS.gene069065.t1;Parent=MS.gene069065.t1 |
| chr7.2 | exon | 34715143 | 34715163 | 34715143 | ID=MS.gene069065.t1.exon4;Parent=MS.gene069065.t1 |
| chr7.2 | CDS | 34715143 | 34715163 | 34715143 | ID=cds.MS.gene069065.t1;Parent=MS.gene069065.t1 |
| Gene Sequence |
| Protein sequence |
