AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene07321


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene07321.t1 MTR_1g086790 95.480 177 8 0 1 177 149 325 1.59e-115 330
MS.gene07321.t1 MTR_7g109800 63.889 180 42 9 1 177 136 295 3.25e-65 202
MS.gene07321.t1 MTR_2g033820 50.000 188 74 5 1 177 194 372 1.19e-45 154
MS.gene07321.t1 MTR_4g094588 48.276 174 80 3 1 174 169 332 4.03e-40 139
MS.gene07321.t1 MTR_5g043880 45.506 178 70 4 1 173 115 270 6.24e-38 131
MS.gene07321.t1 MTR_5g091390 79.452 73 15 0 1 73 148 220 1.08e-37 132
MS.gene07321.t1 MTR_4g122530 39.367 221 69 7 2 169 200 408 3.81e-37 132
MS.gene07321.t1 MTR_3g104750 71.642 67 19 0 2 68 96 162 1.37e-30 109
MS.gene07321.t1 MTR_7g028415 72.727 66 18 0 2 67 85 150 3.49e-30 108
MS.gene07321.t1 MTR_7g028710 72.727 66 18 0 2 67 85 150 3.49e-30 108
MS.gene07321.t1 MTR_5g042920 69.118 68 21 0 2 69 312 379 4.88e-29 111
MS.gene07321.t1 MTR_5g042920 58.065 62 23 2 10 69 151 211 2.92e-16 75.9
MS.gene07321.t1 MTR_7g011820 64.865 74 26 0 2 75 402 475 5.99e-29 111
MS.gene07321.t1 MTR_7g011820 56.250 64 27 1 10 73 228 290 1.79e-16 76.6
MS.gene07321.t1 MTR_4g082580 69.118 68 21 0 2 69 270 337 2.19e-28 108
MS.gene07321.t1 MTR_4g082580 51.562 64 31 0 10 73 145 208 6.68e-17 77.4
MS.gene07321.t1 MTR_7g079010 68.571 70 22 0 2 71 133 202 4.60e-28 104
MS.gene07321.t1 MTR_1g015140 67.164 67 22 0 2 68 94 160 4.92e-28 102
MS.gene07321.t1 MTR_3g095080 63.514 74 26 1 2 74 136 209 7.98e-27 101
MS.gene07321.t1 MTR_3g095080 63.514 74 26 1 2 74 160 233 1.03e-26 101
MS.gene07321.t1 MTR_3g056100 65.217 69 24 0 2 70 250 318 5.11e-26 103
MS.gene07321.t1 MTR_3g056100 56.522 69 28 2 10 78 99 165 2.81e-17 78.6
MS.gene07321.t1 MTR_3g056100 65.217 69 24 0 2 70 263 331 5.30e-26 103
MS.gene07321.t1 MTR_3g056100 56.522 69 28 2 10 78 99 165 2.68e-17 78.6
MS.gene07321.t1 MTR_8g092140 66.667 63 21 0 4 66 154 216 6.16e-26 99.4
MS.gene07321.t1 MTR_5g094430 59.459 74 30 0 2 75 222 295 6.85e-26 102
MS.gene07321.t1 MTR_5g094430 57.353 68 28 1 11 78 67 133 2.50e-17 78.6
MS.gene07321.t1 MTR_5g094430 59.459 74 30 0 2 75 244 317 7.97e-26 102
MS.gene07321.t1 MTR_5g094430 57.353 68 28 1 11 78 89 155 2.45e-17 79.0
MS.gene07321.t1 MTR_3g056100 65.217 69 24 0 2 70 407 475 8.18e-26 103
MS.gene07321.t1 MTR_3g056100 56.522 69 28 2 10 78 243 309 3.11e-17 78.6
MS.gene07321.t1 MTR_3g056100 65.217 69 24 0 2 70 394 462 8.82e-26 103
MS.gene07321.t1 MTR_3g056100 56.522 69 28 2 10 78 243 309 3.37e-17 78.6
MS.gene07321.t1 MTR_5g094430 59.459 74 30 0 2 75 356 429 1.26e-25 102
MS.gene07321.t1 MTR_5g094430 57.353 68 28 1 11 78 201 267 3.37e-17 78.6
MS.gene07321.t1 MTR_8g092010 57.746 71 30 0 2 72 100 170 1.28e-25 97.4
MS.gene07321.t1 MTR_8g007270 67.692 65 21 0 2 66 146 210 3.06e-25 97.4
MS.gene07321.t1 MTR_3g095040 57.746 71 30 0 2 72 110 180 3.49e-25 96.7
MS.gene07321.t1 MTR_3g009470 60.811 74 29 0 2 75 487 560 4.75e-25 101
MS.gene07321.t1 MTR_3g009470 54.795 73 32 1 10 82 280 351 4.13e-19 84.3
MS.gene07321.t1 MTR_8g096730 56.061 66 29 0 2 67 62 127 7.36e-25 94.4
MS.gene07321.t1 MTR_7g071120 49.451 91 38 1 2 84 316 406 1.48e-24 99.4
MS.gene07321.t1 MTR_7g071120 56.250 64 27 1 10 73 166 228 1.85e-17 79.3
MS.gene07321.t1 MTR_1g077780 45.055 91 50 0 1 91 53 143 1.84e-24 93.2
MS.gene07321.t1 MTR_3g031220 54.217 83 38 0 2 84 357 439 2.57e-24 99.0
MS.gene07321.t1 MTR_3g031220 53.125 64 29 1 10 73 198 260 6.81e-16 74.7
MS.gene07321.t1 MTR_7g100510 61.972 71 25 1 1 69 350 420 5.91e-24 97.4
MS.gene07321.t1 MTR_7g100510 46.341 82 38 2 11 92 190 265 1.23e-16 76.6
MS.gene07321.t1 MTR_4g013260 60.294 68 27 0 2 69 328 395 2.15e-23 96.3
MS.gene07321.t1 MTR_4g013260 54.688 64 29 0 10 73 184 247 3.89e-19 84.0
MS.gene07321.t1 MTR_7g080000 57.971 69 29 0 2 70 424 492 4.92e-23 95.5
MS.gene07321.t1 MTR_7g080000 55.385 65 28 1 9 73 233 296 1.17e-17 80.1
MS.gene07321.t1 MTR_7g062220 66.667 57 19 0 10 66 124 180 6.47e-23 93.2
MS.gene07321.t1 MTR_7g080020 58.824 68 28 0 3 70 486 553 7.66e-23 94.7
MS.gene07321.t1 MTR_7g080020 59.375 64 25 1 10 73 280 342 2.59e-18 82.0
MS.gene07321.t1 MTR_2g105060 57.143 63 26 1 9 70 93 155 1.82e-22 90.5
MS.gene07321.t1 MTR_5g074400 60.294 68 27 0 2 69 412 479 2.27e-22 93.6
MS.gene07321.t1 MTR_5g074400 55.000 60 26 1 10 69 243 301 3.69e-15 72.8
MS.gene07321.t1 MTR_2g105060 57.143 63 26 1 9 70 168 230 3.16e-22 91.3
MS.gene07321.t1 MTR_2g088000 42.056 107 58 2 3 108 342 445 2.21e-21 90.5
MS.gene07321.t1 MTR_3g053330 42.857 105 56 3 3 106 244 345 2.56e-21 90.1
MS.gene07321.t1 MTR_4g132430 55.882 68 29 1 3 69 120 187 5.44e-21 88.6
MS.gene07321.t1 MTR_4g132430 55.882 68 29 1 3 69 254 321 1.20e-20 88.6
MS.gene07321.t1 MTR_2g023930 55.882 68 29 1 3 69 298 365 2.32e-20 87.8
MS.gene07321.t1 MTR_2g032030 55.072 69 29 2 11 78 268 335 2.93e-20 87.4
MS.gene07321.t1 MTR_5g097490 57.971 69 29 0 2 70 244 312 3.02e-20 86.7
MS.gene07321.t1 MTR_5g097490 40.909 110 58 4 10 115 92 198 2.25e-14 70.1
MS.gene07321.t1 MTR_2g032030 55.072 69 29 2 11 78 268 335 3.12e-20 87.0
MS.gene07321.t1 MTR_6g086555 51.471 68 32 1 7 73 203 270 3.57e-20 86.7
MS.gene07321.t1 MTR_7g110720 54.412 68 30 1 3 69 209 276 5.43e-20 86.3
MS.gene07321.t1 MTR_7g109600 45.455 88 46 2 11 96 54 141 5.64e-20 84.3
MS.gene07321.t1 MTR_7g110720 54.412 68 30 1 3 69 182 249 6.06e-20 85.9
MS.gene07321.t1 MTR_8g098945 50.704 71 33 2 9 78 128 197 7.74e-20 84.3
MS.gene07321.t1 MTR_1g013760 45.122 82 44 1 8 88 138 219 8.79e-20 84.3
MS.gene07321.t1 MTR_8g028565 52.174 69 31 2 11 78 156 223 9.51e-20 84.7
MS.gene07321.t1 MTR_4g007060 54.839 62 27 1 9 69 127 188 1.07e-19 84.0
MS.gene07321.t1 MTR_4g007060 54.839 62 27 1 9 69 161 222 1.58e-19 84.0
MS.gene07321.t1 MTR_4g094412 54.412 68 30 1 3 69 227 294 2.52e-19 84.7
MS.gene07321.t1 MTR_4g130900 41.000 100 44 1 11 95 360 459 2.87e-19 84.3
MS.gene07321.t1 MTR_4g094412 54.412 68 30 1 3 69 236 303 2.88e-19 84.3
MS.gene07321.t1 MTR_7g009730 56.061 66 28 1 3 67 212 277 3.39e-19 84.3
MS.gene07321.t1 MTR_3g009470 54.795 73 32 1 10 82 280 351 5.46e-19 83.6
MS.gene07321.t1 MTR_1g078260 54.545 66 29 1 2 66 239 304 8.08e-19 83.2
MS.gene07321.t1 MTR_3g106060 44.048 84 44 2 8 88 136 219 8.45e-19 81.6
MS.gene07321.t1 MTR_7g079040 45.000 80 40 2 11 86 155 234 2.30e-18 80.9
MS.gene07321.t1 MTR_4g107970 56.452 62 26 1 9 69 177 238 3.17e-18 81.6
MS.gene07321.t1 MTR_4g107970 56.452 62 26 1 9 69 254 315 3.67e-18 81.3
MS.gene07321.t1 MTR_4g049760 47.222 72 37 1 3 73 283 354 7.31e-18 80.5
MS.gene07321.t1 MTR_2g045360 45.833 72 38 1 3 73 204 275 8.36e-18 80.1
MS.gene07321.t1 MTR_1g013790 41.860 86 46 2 9 93 100 182 9.08e-18 78.2
MS.gene07321.t1 MTR_1g009613 54.386 57 25 1 11 66 263 319 1.07e-17 79.3
MS.gene07321.t1 MTR_4g049790 48.611 72 36 1 3 73 305 376 1.15e-17 80.1
MS.gene07321.t1 MTR_8g087000 28.994 169 95 6 11 156 77 243 3.28e-17 76.6
MS.gene07321.t1 MTR_8g087000 28.994 169 95 6 11 156 78 244 3.89e-17 76.6
MS.gene07321.t1 MTR_5g016610 56.140 57 24 1 11 66 200 256 5.31e-17 76.6
MS.gene07321.t1 MTR_2g024350 44.286 70 38 1 10 78 8 77 8.14e-17 75.5
MS.gene07321.t1 MTR_2g024380 45.714 70 37 1 10 78 251 320 8.41e-17 77.4
MS.gene07321.t1 MTR_4g127040 44.444 72 39 1 6 76 241 312 1.04e-16 76.3
MS.gene07321.t1 MTR_1g099600 48.000 75 36 3 6 78 180 253 1.45e-16 75.9
MS.gene07321.t1 MTR_2g016770 48.333 60 30 1 11 69 36 95 1.68e-16 74.3
MS.gene07321.t1 MTR_2g016770 48.333 60 30 1 11 69 28 87 1.73e-16 73.9
MS.gene07321.t1 MTR_4g094908 54.386 57 25 1 11 66 267 323 2.39e-16 75.5
MS.gene07321.t1 MTR_3g031220 53.125 64 29 1 10 73 198 260 4.74e-16 75.1
MS.gene07321.t1 MTR_3g108960 51.613 62 29 1 6 66 310 371 7.97e-16 74.3
MS.gene07321.t1 MTR_0117s0040 54.237 59 26 1 11 68 75 133 1.64e-15 72.0
MS.gene07321.t1 MTR_1g070455 50.877 57 27 1 11 66 294 350 1.74e-15 73.2
MS.gene07321.t1 MTR_2g083870 50.000 60 29 1 11 69 81 140 5.48e-15 70.9
MS.gene07321.t1 MTR_8g067650 45.714 70 37 1 10 78 339 408 6.95e-15 72.0
MS.gene07321.t1 MTR_8g067635 45.714 70 37 1 10 78 349 418 9.62e-15 71.6
MS.gene07321.t1 MTR_8g099350 55.932 59 23 1 10 65 132 190 1.41e-14 70.9
MS.gene07321.t1 MTR_5g097500 47.826 69 36 0 2 70 222 290 1.77e-14 70.1
MS.gene07321.t1 MTR_5g097500 30.345 145 80 4 10 145 83 215 7.82e-13 65.5
MS.gene07321.t1 MTR_8g069935 43.836 73 39 2 10 80 331 403 2.98e-14 70.1
MS.gene07321.t1 MTR_5g074200 49.206 63 31 1 10 72 220 281 4.58e-14 68.9
MS.gene07321.t1 MTR_3g090860 51.667 60 26 1 9 65 132 191 6.70e-14 68.6
MS.gene07321.t1 MTR_7g117200 50.000 60 27 1 9 65 117 176 1.58e-13 67.4
MS.gene07321.t1 MTR_7g073430 50.847 59 26 1 10 65 122 180 1.61e-13 67.0
MS.gene07321.t1 MTR_6g053200 37.805 82 50 1 10 90 330 411 2.30e-13 67.4
MS.gene07321.t1 MTR_5g029850 92.857 28 2 0 1 28 42 69 2.45e-13 62.4
MS.gene07321.t1 MTR_8g027860 48.333 60 28 1 9 65 135 194 3.15e-13 66.6
MS.gene07321.t1 MTR_4g047580 38.889 72 43 1 3 73 274 345 3.28e-13 67.0
MS.gene07321.t1 MTR_5g067680 42.683 82 39 2 10 88 202 278 4.71e-13 66.2
MS.gene07321.t1 MTR_2g075750 46.667 60 29 1 9 65 27 86 8.74e-13 63.5
MS.gene07321.t1 MTR_7g073380 46.667 60 29 1 9 65 122 181 3.46e-12 63.5
MS.gene07321.t1 MTR_2g075610 47.458 59 28 1 9 64 28 86 3.92e-12 62.0
MS.gene07321.t1 MTR_2g075680 48.333 60 28 1 9 65 147 206 5.55e-12 63.2
MS.gene07321.t1 MTR_2g075700 46.667 60 29 1 9 65 143 202 1.64e-11 61.6
MS.gene07321.t1 MTR_5g067700 44.828 58 29 1 11 65 107 164 2.57e-11 60.5
MS.gene07321.t1 MTR_8g032510 47.458 59 28 1 10 65 119 177 4.83e-11 60.1
MS.gene07321.t1 MTR_5g018380 44.068 59 31 1 9 67 122 178 5.63e-11 58.9
MS.gene07321.t1 MTR_8g005750 45.763 59 29 1 10 65 103 161 7.77e-11 59.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene07321.t1 AT2G47260 52.747 182 72 4 1 177 165 337 1.71e-51 168
MS.gene07321.t1 AT1G29860 50.282 177 66 4 1 177 127 281 2.39e-46 153
MS.gene07321.t1 AT5G49520 46.448 183 78 5 1 173 212 384 6.52e-42 145
MS.gene07321.t1 AT5G46350 78.750 80 16 1 1 79 174 253 3.64e-41 141
MS.gene07321.t1 AT3G62340 44.068 177 90 2 1 177 109 276 1.40e-40 138
MS.gene07321.t1 AT4G18170 83.562 73 12 0 1 73 163 235 1.50e-40 139
MS.gene07321.t1 AT1G69310 84.848 66 10 0 1 66 138 203 3.45e-36 127
MS.gene07321.t1 AT1G69310 84.848 66 10 0 1 66 138 203 3.45e-36 127
MS.gene07321.t1 AT1G69310 84.848 66 10 0 1 66 138 203 3.45e-36 127
MS.gene07321.t1 AT1G69310 78.788 66 10 1 1 66 138 199 9.81e-31 113
MS.gene07321.t1 AT5G13080 71.212 66 19 0 2 67 59 124 3.05e-30 108
MS.gene07321.t1 AT3G01970 69.231 65 20 0 2 66 57 121 6.24e-29 104
MS.gene07321.t1 AT4G39410 59.524 84 33 1 2 84 215 298 1.59e-28 107
MS.gene07321.t1 AT2G46130 65.714 70 24 0 2 71 22 91 2.73e-28 102
MS.gene07321.t1 AT1G13960 68.116 69 22 0 1 69 247 315 3.28e-28 108
MS.gene07321.t1 AT1G13960 60.000 60 23 1 10 69 76 134 1.27e-17 79.3
MS.gene07321.t1 AT1G13960 69.118 68 21 0 2 69 401 468 6.16e-28 108
MS.gene07321.t1 AT1G13960 60.000 60 23 1 10 69 229 287 1.05e-17 80.1
MS.gene07321.t1 AT1G64000 64.286 70 25 0 2 71 106 175 7.18e-28 103
MS.gene07321.t1 AT2G03340 64.865 74 26 0 2 75 407 480 8.85e-28 108
MS.gene07321.t1 AT2G03340 61.667 60 22 1 10 69 250 308 9.13e-18 80.1
MS.gene07321.t1 AT5G26170 64.179 67 24 0 2 68 105 171 1.46e-27 102
MS.gene07321.t1 AT5G41570 66.667 66 22 0 2 67 90 155 1.43e-26 99.8
MS.gene07321.t1 AT3G01080 67.647 68 22 0 2 69 336 403 1.93e-26 104
MS.gene07321.t1 AT3G01080 53.030 66 30 1 10 75 205 269 2.29e-16 76.3
MS.gene07321.t1 AT5G07100 61.111 72 28 0 2 73 133 204 2.00e-26 100
MS.gene07321.t1 AT5G07100 46.970 66 35 0 10 75 24 89 2.33e-15 71.2
MS.gene07321.t1 AT5G07100 61.111 72 28 0 2 73 133 204 2.00e-26 100
MS.gene07321.t1 AT5G07100 46.970 66 35 0 10 75 24 89 2.33e-15 71.2
MS.gene07321.t1 AT5G07100 61.111 72 28 0 2 73 133 204 2.00e-26 100
MS.gene07321.t1 AT5G07100 46.970 66 35 0 10 75 24 89 2.33e-15 71.2
MS.gene07321.t1 AT5G07100 61.111 72 28 0 2 73 133 204 2.00e-26 100
MS.gene07321.t1 AT5G07100 46.970 66 35 0 10 75 24 89 2.33e-15 71.2
MS.gene07321.t1 AT3G01080 67.647 68 22 0 2 69 298 365 2.12e-26 103
MS.gene07321.t1 AT3G01080 53.030 66 30 1 10 75 167 231 2.48e-16 75.9
MS.gene07321.t1 AT2G44745 69.231 65 20 0 2 66 137 201 4.40e-26 99.4
MS.gene07321.t1 AT4G26640 46.094 128 56 4 2 123 197 317 5.66e-26 102
MS.gene07321.t1 AT4G26640 54.286 70 31 1 10 79 35 103 1.33e-17 79.3
MS.gene07321.t1 AT4G26640 46.094 128 56 4 2 123 197 317 5.66e-26 102
MS.gene07321.t1 AT4G26640 54.286 70 31 1 10 79 35 103 1.33e-17 79.3
MS.gene07321.t1 AT4G26640 46.094 128 56 4 2 123 197 317 5.66e-26 102
MS.gene07321.t1 AT4G26640 54.286 70 31 1 10 79 35 103 1.33e-17 79.3
MS.gene07321.t1 AT4G26640 46.094 128 56 4 2 123 197 317 5.66e-26 102
MS.gene07321.t1 AT4G26640 54.286 70 31 1 10 79 35 103 1.33e-17 79.3
MS.gene07321.t1 AT5G07100 61.111 72 28 0 2 73 226 297 6.14e-26 101
MS.gene07321.t1 AT5G07100 46.970 66 35 0 10 75 117 182 4.43e-15 71.6
MS.gene07321.t1 AT4G26640 46.094 128 56 4 2 123 301 421 1.75e-25 102
MS.gene07321.t1 AT4G26640 54.286 70 31 1 10 79 139 207 1.93e-17 79.3
MS.gene07321.t1 AT4G26640 46.094 128 56 4 2 123 373 493 2.15e-25 102
MS.gene07321.t1 AT4G26640 54.286 70 31 1 10 79 211 279 2.20e-17 79.3
MS.gene07321.t1 AT4G26640 46.094 128 56 4 2 123 333 453 2.19e-25 102
MS.gene07321.t1 AT4G26640 54.286 70 31 1 10 79 171 239 2.42e-17 79.0
MS.gene07321.t1 AT2G21900 53.425 73 31 1 2 71 98 170 3.63e-25 96.7
MS.gene07321.t1 AT2G38470 52.874 87 41 0 2 88 354 440 4.81e-25 100
MS.gene07321.t1 AT2G38470 58.333 60 24 1 10 69 184 242 8.38e-16 74.7
MS.gene07321.t1 AT5G56270 61.765 68 26 0 2 69 479 546 1.99e-23 96.7
MS.gene07321.t1 AT5G56270 52.778 72 31 2 10 81 273 341 1.28e-16 77.0
MS.gene07321.t1 AT2G04880 60.294 68 27 0 2 69 275 342 3.20e-23 95.5
MS.gene07321.t1 AT2G04880 57.377 61 25 1 9 69 110 169 3.03e-16 75.9
MS.gene07321.t1 AT2G04880 60.294 68 27 0 2 69 299 366 3.36e-23 95.5
MS.gene07321.t1 AT2G04880 57.377 61 25 1 9 69 110 169 3.03e-16 75.9
MS.gene07321.t1 AT5G64810 53.731 67 31 0 2 68 102 168 3.45e-23 91.3
MS.gene07321.t1 AT4G26440 55.128 78 35 0 2 79 364 441 5.12e-23 95.5
MS.gene07321.t1 AT4G26440 50.725 69 33 1 10 78 178 245 5.48e-16 75.1
MS.gene07321.t1 AT2G46130 60.000 70 24 1 2 71 22 87 7.16e-23 88.2
MS.gene07321.t1 AT2G30250 59.722 72 29 0 2 73 320 391 1.24e-22 93.6
MS.gene07321.t1 AT2G30250 44.828 87 39 2 11 89 167 252 3.30e-14 69.7
MS.gene07321.t1 AT2G37260 61.290 62 24 0 5 66 262 323 2.03e-22 92.4
MS.gene07321.t1 AT2G37260 43.689 103 48 3 11 104 84 185 1.81e-16 75.9
MS.gene07321.t1 AT2G37260 61.290 62 24 0 5 66 264 325 2.03e-22 92.4
MS.gene07321.t1 AT2G37260 43.689 103 48 3 11 104 86 187 1.73e-16 75.9
MS.gene07321.t1 AT1G55600 59.701 67 27 0 3 69 300 366 2.23e-22 93.2
MS.gene07321.t1 AT2G37260 61.290 62 24 0 5 66 344 405 3.50e-22 92.4
MS.gene07321.t1 AT2G37260 43.689 103 48 3 11 104 166 267 3.75e-16 75.5
MS.gene07321.t1 AT1G80840 53.968 63 28 1 9 70 145 207 8.17e-21 87.4
MS.gene07321.t1 AT4G04450 55.882 68 29 1 3 69 191 258 1.84e-20 87.8
MS.gene07321.t1 AT4G22070 55.072 69 30 1 2 69 289 357 2.30e-20 87.8
MS.gene07321.t1 AT4G22070 55.072 69 30 1 2 69 289 357 2.30e-20 87.8
MS.gene07321.t1 AT4G22070 55.072 69 30 1 2 69 289 357 2.30e-20 87.8
MS.gene07321.t1 AT4G22070 55.072 69 30 1 2 69 289 357 2.30e-20 87.8
MS.gene07321.t1 AT1G30650 55.072 69 29 2 11 78 218 285 2.63e-20 87.4
MS.gene07321.t1 AT4G31800 53.846 65 29 1 9 72 110 174 3.54e-20 84.7
MS.gene07321.t1 AT5G52830 55.072 69 29 2 11 78 166 233 3.56e-20 86.3
MS.gene07321.t1 AT2G34830 55.072 69 29 2 11 78 216 283 3.77e-20 86.7
MS.gene07321.t1 AT2G34830 55.072 69 29 2 11 78 225 292 3.84e-20 86.7
MS.gene07321.t1 AT4G04450 55.882 68 29 1 3 69 285 352 3.87e-20 87.0
MS.gene07321.t1 AT5G43290 61.404 57 22 0 10 66 114 170 3.90e-20 85.1
MS.gene07321.t1 AT1G62300 55.882 68 29 1 3 69 305 372 4.46e-20 87.0
MS.gene07321.t1 AT4G31800 53.846 65 29 1 9 72 175 239 5.67e-20 85.1
MS.gene07321.t1 AT2G25000 45.882 85 39 2 9 92 102 180 6.59e-20 83.6
MS.gene07321.t1 AT2G25000 45.882 85 39 2 9 92 102 180 6.59e-20 83.6
MS.gene07321.t1 AT5G45050 55.072 69 29 2 11 78 1042 1109 6.64e-20 86.7
MS.gene07321.t1 AT2G25000 45.882 85 39 2 9 92 124 202 9.85e-20 83.6
MS.gene07321.t1 AT5G45050 55.072 69 29 2 11 78 1181 1248 1.17e-19 85.9
MS.gene07321.t1 AT5G45050 55.072 69 29 2 11 78 1153 1220 1.25e-19 85.9
MS.gene07321.t1 AT2G25000 45.882 85 39 2 9 92 145 223 1.44e-19 83.6
MS.gene07321.t1 AT1G68150 54.412 68 30 1 3 69 228 295 1.74e-19 84.7
MS.gene07321.t1 AT1G18860 53.623 69 31 1 2 69 231 299 5.17e-19 84.0
MS.gene07321.t1 AT4G01250 50.725 69 32 2 11 78 129 196 1.04e-18 81.6
MS.gene07321.t1 AT4G01720 52.941 68 31 1 3 69 232 299 2.41e-18 82.0
MS.gene07321.t1 AT1G29280 52.381 63 29 1 11 72 75 137 3.44e-18 79.7
MS.gene07321.t1 AT5G15130 56.452 62 26 1 9 69 226 287 4.26e-18 81.3
MS.gene07321.t1 AT5G15130 56.452 62 26 1 9 69 184 245 4.70e-18 80.9
MS.gene07321.t1 AT4G30935 43.529 85 43 1 11 95 332 411 6.23e-18 80.5
MS.gene07321.t1 AT3G58710 48.611 72 36 1 2 72 63 134 4.14e-17 77.0
MS.gene07321.t1 AT3G58710 48.611 72 36 1 2 72 62 133 4.22e-17 77.0
MS.gene07321.t1 AT2G30590 51.724 58 27 1 11 67 314 371 4.29e-17 77.8
MS.gene07321.t1 AT4G31550 51.613 62 29 1 11 71 246 307 4.68e-17 77.4
MS.gene07321.t1 AT4G31550 51.613 62 29 1 11 71 247 308 4.91e-17 77.4
MS.gene07321.t1 AT3G01080 53.030 66 30 1 10 75 205 269 1.49e-16 75.9
MS.gene07321.t1 AT2G24570 51.613 62 29 1 11 71 244 305 3.57e-16 75.1
MS.gene07321.t1 AT4G23550 46.667 75 38 2 5 78 135 208 4.23e-16 74.7
MS.gene07321.t1 AT2G23320 52.632 57 26 1 11 66 241 297 9.89e-16 73.6
MS.gene07321.t1 AT1G69810 46.575 73 37 2 9 79 202 274 1.57e-15 73.6
MS.gene07321.t1 AT1G69810 46.575 73 37 2 9 79 144 216 1.81e-15 73.2
MS.gene07321.t1 AT5G28650 48.485 66 33 1 11 75 263 328 2.22e-15 72.8
MS.gene07321.t1 AT3G04670 48.485 66 33 1 11 75 263 328 2.50e-15 72.8
MS.gene07321.t1 AT5G45260 48.571 70 32 2 11 77 1209 1277 4.16e-15 72.8
MS.gene07321.t1 AT4G24240 46.774 62 32 1 6 66 277 338 1.59e-14 70.5
MS.gene07321.t1 AT1G66560 50.847 59 26 1 10 65 103 161 2.39e-14 68.9
MS.gene07321.t1 AT4G12020 45.455 66 35 1 8 73 399 463 7.23e-14 69.3
MS.gene07321.t1 AT3G56400 48.333 60 28 1 9 65 119 178 8.80e-14 68.2
MS.gene07321.t1 AT4G12020 44.118 68 37 1 8 75 466 532 2.82e-13 67.4
MS.gene07321.t1 AT4G12020 44.118 68 37 1 8 75 466 532 2.89e-13 67.4
MS.gene07321.t1 AT4G12020 44.118 68 37 1 8 75 466 532 2.89e-13 67.4
MS.gene07321.t1 AT4G12020 44.118 68 37 1 8 75 466 532 2.96e-13 67.4
MS.gene07321.t1 AT4G12020 44.118 68 37 1 8 75 466 532 3.10e-13 67.4
MS.gene07321.t1 AT2G46400 30.263 152 82 5 2 146 96 230 3.11e-13 66.6
MS.gene07321.t1 AT4G12020 44.118 68 37 1 8 75 466 532 3.13e-13 67.4
MS.gene07321.t1 AT4G12020 44.118 68 37 1 8 75 466 532 3.13e-13 67.4
MS.gene07321.t1 AT4G12020 44.118 68 37 1 8 75 466 532 3.17e-13 67.4
MS.gene07321.t1 AT4G12020 44.118 68 37 1 8 75 466 532 3.20e-13 67.4
MS.gene07321.t1 AT4G11070 52.542 59 25 1 10 65 109 167 3.31e-13 66.2
MS.gene07321.t1 AT4G11070 52.542 59 25 1 10 65 141 199 3.55e-13 66.6
MS.gene07321.t1 AT4G12020 44.118 68 37 1 8 75 466 532 3.68e-13 67.0
MS.gene07321.t1 AT1G66600 50.000 60 27 1 9 65 102 161 2.16e-12 63.5
MS.gene07321.t1 AT1G66550 50.000 58 26 1 11 65 104 161 2.41e-12 63.5
MS.gene07321.t1 AT2G40740 35.922 103 58 2 10 104 182 284 2.68e-12 63.9
MS.gene07321.t1 AT1G66550 50.000 58 26 1 11 65 109 166 2.69e-12 63.5
MS.gene07321.t1 AT1G80590 46.032 63 31 1 11 70 86 148 2.82e-12 63.2
MS.gene07321.t1 AT2G40740 35.922 103 58 2 10 104 173 275 2.94e-12 63.9
MS.gene07321.t1 AT5G24110 38.961 77 39 2 9 82 112 183 3.60e-12 63.5
MS.gene07321.t1 AT2G40750 49.153 59 27 1 10 65 152 210 4.40e-12 63.5
MS.gene07321.t1 AT4G23810 49.153 59 27 1 10 65 158 216 1.36e-11 62.0
MS.gene07321.t1 AT5G01900 47.368 57 27 1 11 64 111 167 2.86e-11 60.8

Find 46 sgRNAs with CRISPR-Local

Find 54 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAGGGACAACTGCATTTCTT+AGG 0.222393 1.2:-65204320 MS.gene07321:CDS
ACTGCATTTCTTAGGGATAA+TGG 0.268383 1.2:-65204312 MS.gene07321:CDS
AATGATGAAGAATTGTTATA+AGG 0.284749 1.2:+65204390 None:intergenic
CTGCATTTCTTAGGGATAAT+GGG 0.307370 1.2:-65204311 MS.gene07321:CDS
ACTCTCTCTTGGGCAGTAAA+AGG 0.341688 1.2:+65204357 None:intergenic
ATGTCCCGTTCCGCCTTTGC+CGG 0.342549 1.2:-65204567 MS.gene07321:CDS
AAGTAGTTGTTGATGTTGAT+AGG 0.343522 1.2:+65204440 None:intergenic
TAGGGATAATGGGCTACTTC+AGG 0.363679 1.2:-65204301 MS.gene07321:CDS
AACTCCGGCAAAGGCGGAAC+GGG 0.372094 1.2:+65204563 None:intergenic
TACAAAGCTGTACTCTCTCT+TGG 0.398729 1.2:+65204346 None:intergenic
TATGAGTAGTACCTTGGAAA+AGG 0.414311 1.2:+65204820 None:intergenic
AGAGTACAGCTTTGTAATCA+AGG 0.440017 1.2:-65204339 MS.gene07321:CDS
ACCACCCGCCGGTGTAGTCT+CGG 0.441892 1.2:-65204532 MS.gene07321:CDS
GGATTTCCAGCTACTAACTT+TGG 0.448624 1.2:-65204507 MS.gene07321:CDS
ATGATGAAGAATTGTTATAA+GGG 0.461940 1.2:+65204391 None:intergenic
AGGGACAACTGCATTTCTTA+GGG 0.464209 1.2:-65204319 MS.gene07321:CDS
ATGAGTAGTACCTTGGAAAA+GGG 0.468338 1.2:+65204821 None:intergenic
ACTGAACCAAAGTTAGTAGC+TGG 0.485678 1.2:+65204501 None:intergenic
ACAAAGCTGTACTCTCTCTT+GGG 0.501900 1.2:+65204347 None:intergenic
AAGGCGGAACGGGACATAGT+TGG 0.509083 1.2:+65204573 None:intergenic
ATTGTAGTCACAACATATGA+AGG 0.530444 1.2:-65204615 MS.gene07321:CDS
TTTGACCGTACTTTCTCCAT+CGG 0.538876 1.2:+65204860 None:intergenic
AGTAGTTGTTGATGTTGATA+GGG 0.541403 1.2:+65204441 None:intergenic
TATGTTGTGACTACAATGCT+TGG 0.546996 1.2:+65204621 None:intergenic
CCACCCGCCGGTGTAGTCTC+GGG 0.562733 1.2:-65204531 MS.gene07321:CDS
CTTGACATTACATGCAGCAG+TGG 0.566999 1.2:+65204671 None:intergenic
GAACGGGACATAGTTGGACT+TGG 0.567628 1.2:+65204579 None:intergenic
TTGGACTTGGATGTGTGTGT+TGG 0.571102 1.2:+65204592 None:intergenic
GGATACCGATGGAGAAAGTA+CGG 0.573593 1.2:-65204865 MS.gene07321:CDS
GAGTACAGCTTTGTAATCAA+GGG 0.578972 1.2:-65204338 MS.gene07321:CDS
GAGGTTGATCATCTGGAAGA+TGG 0.579335 1.2:-65204886 MS.gene07321:CDS
GAGACTACACCGGCGGGTGG+TGG 0.579641 1.2:+65204534 None:intergenic
GTTATAAGGGTGATTCAAAG+AGG 0.581408 1.2:+65204404 None:intergenic
TGGTATTTGAACTCCGGCAA+AGG 0.581607 1.2:+65204554 None:intergenic
TCTTCTTTCAACATATGTGA+AGG 0.587303 1.2:+65204270 None:intergenic
GAACTCCGGCAAAGGCGGAA+CGG 0.591004 1.2:+65204562 None:intergenic
GGGTGGTGGTATTTGAACTC+CGG 0.600942 1.2:+65204548 None:intergenic
CCCGCCGGTGTAGTCTCGGG+TGG 0.601478 1.2:-65204528 MS.gene07321:CDS
ATCTGGAAGATGGATACCGA+TGG 0.620143 1.2:-65204876 MS.gene07321:CDS
CCACCCGAGACTACACCGGC+GGG 0.621520 1.2:+65204528 None:intergenic
CCCGAGACTACACCGGCGGG+TGG 0.635933 1.2:+65204531 None:intergenic
AAATCCACCCGAGACTACAC+CGG 0.638946 1.2:+65204524 None:intergenic
TATTTGAACTCCGGCAAAGG+CGG 0.643870 1.2:+65204557 None:intergenic
TCCACCCGAGACTACACCGG+CGG 0.646130 1.2:+65204527 None:intergenic
GTTCAAATACCACCACCCGC+CGG 0.680657 1.2:-65204543 MS.gene07321:CDS
ATGTAATGTCAAGAAACGTG+TGG 0.745114 1.2:-65204661 MS.gene07321:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATGATGAAGAATTGTTATA+AGG + chr1.2:65204777-65204796 None:intergenic 20.0%
!! ATGATGAAGAATTGTTATAA+GGG + chr1.2:65204776-65204795 None:intergenic 20.0%
!!! TACAGTTTACTAATGATTTT+GGG + chr1.2:65204420-65204439 None:intergenic 20.0%
!!! TTACAGTTTACTAATGATTT+TGG + chr1.2:65204421-65204440 None:intergenic 20.0%
!! AATTTTTATGAGTAGTACCT+TGG + chr1.2:65204353-65204372 None:intergenic 25.0%
AAGTAGTTGTTGATGTTGAT+AGG + chr1.2:65204727-65204746 None:intergenic 30.0%
AGTAGTTGTTGATGTTGATA+GGG + chr1.2:65204726-65204745 None:intergenic 30.0%
ATTGTAGTCACAACATATGA+AGG - chr1.2:65204549-65204568 MS.gene07321:CDS 30.0%
CTATGTGTTTATGTTTGTGT+AGG - chr1.2:65204454-65204473 MS.gene07321:CDS 30.0%
TCTTCTTTCAACATATGTGA+AGG + chr1.2:65204897-65204916 None:intergenic 30.0%
ACTGCATTTCTTAGGGATAA+TGG - chr1.2:65204852-65204871 MS.gene07321:CDS 35.0%
ATGAGTAGTACCTTGGAAAA+GGG + chr1.2:65204346-65204365 None:intergenic 35.0%
ATGTAATGTCAAGAAACGTG+TGG - chr1.2:65204503-65204522 MS.gene07321:CDS 35.0%
CTGCATTTCTTAGGGATAAT+GGG - chr1.2:65204853-65204872 MS.gene07321:CDS 35.0%
GTTATAAGGGTGATTCAAAG+AGG + chr1.2:65204763-65204782 None:intergenic 35.0%
TATGAGTAGTACCTTGGAAA+AGG + chr1.2:65204347-65204366 None:intergenic 35.0%
TATGTTGTGACTACAATGCT+TGG + chr1.2:65204546-65204565 None:intergenic 35.0%
! AGAGTACAGCTTTGTAATCA+AGG - chr1.2:65204825-65204844 MS.gene07321:intron 35.0%
! GAGTACAGCTTTGTAATCAA+GGG - chr1.2:65204826-65204845 MS.gene07321:intron 35.0%
! TCAAAAATAGCCCTTTTCCA+AGG - chr1.2:65204333-65204352 MS.gene07321:CDS 35.0%
!! AACTTTGGTTCAGTTTTGCA+AGG - chr1.2:65204672-65204691 MS.gene07321:CDS 35.0%
!! TCTTTGAGTTCACACTCTTT+TGG - chr1.2:65204372-65204391 MS.gene07321:CDS 35.0%
AAGGGACAACTGCATTTCTT+AGG - chr1.2:65204844-65204863 MS.gene07321:CDS 40.0%
ACAAAGCTGTACTCTCTCTT+GGG + chr1.2:65204820-65204839 None:intergenic 40.0%
ACTGAACCAAAGTTAGTAGC+TGG + chr1.2:65204666-65204685 None:intergenic 40.0%
AGGGACAACTGCATTTCTTA+GGG - chr1.2:65204845-65204864 MS.gene07321:CDS 40.0%
GGATTTCCAGCTACTAACTT+TGG - chr1.2:65204657-65204676 MS.gene07321:CDS 40.0%
TACAAAGCTGTACTCTCTCT+TGG + chr1.2:65204821-65204840 None:intergenic 40.0%
TTTGACCGTACTTTCTCCAT+CGG + chr1.2:65204307-65204326 None:intergenic 40.0%
! AAAAAGCGAGGTTGATCATC+TGG - chr1.2:65204271-65204290 MS.gene07321:CDS 40.0%
ACTCTCTCTTGGGCAGTAAA+AGG + chr1.2:65204810-65204829 None:intergenic 45.0%
ATCTGGAAGATGGATACCGA+TGG - chr1.2:65204288-65204307 MS.gene07321:CDS 45.0%
CTTGACATTACATGCAGCAG+TGG + chr1.2:65204496-65204515 None:intergenic 45.0%
GGATACCGATGGAGAAAGTA+CGG - chr1.2:65204299-65204318 MS.gene07321:CDS 45.0%
TATTTGAACTCCGGCAAAGG+CGG + chr1.2:65204610-65204629 None:intergenic 45.0%
TGGTATTTGAACTCCGGCAA+AGG + chr1.2:65204613-65204632 None:intergenic 45.0%
TTGGACTTGGATGTGTGTGT+TGG + chr1.2:65204575-65204594 None:intergenic 45.0%
! GAGGTTGATCATCTGGAAGA+TGG - chr1.2:65204278-65204297 MS.gene07321:CDS 45.0%
!! TAGGGATAATGGGCTACTTC+AGG - chr1.2:65204863-65204882 MS.gene07321:CDS 45.0%
AAATCCACCCGAGACTACAC+CGG + chr1.2:65204643-65204662 None:intergenic 50.0%
GAACGGGACATAGTTGGACT+TGG + chr1.2:65204588-65204607 None:intergenic 50.0%
! GGGTGGTGGTATTTGAACTC+CGG + chr1.2:65204619-65204638 None:intergenic 50.0%
AAGGCGGAACGGGACATAGT+TGG + chr1.2:65204594-65204613 None:intergenic 55.0%
GTTCAAATACCACCACCCGC+CGG - chr1.2:65204621-65204640 MS.gene07321:CDS 55.0%
AACTCCGGCAAAGGCGGAAC+GGG + chr1.2:65204604-65204623 None:intergenic 60.0%
ATGTCCCGTTCCGCCTTTGC+CGG - chr1.2:65204597-65204616 MS.gene07321:CDS 60.0%
GAACTCCGGCAAAGGCGGAA+CGG + chr1.2:65204605-65204624 None:intergenic 60.0%
ACCACCCGCCGGTGTAGTCT+CGG - chr1.2:65204632-65204651 MS.gene07321:CDS 65.0%
TCCACCCGAGACTACACCGG+CGG + chr1.2:65204640-65204659 None:intergenic 65.0%
CCACCCGAGACTACACCGGC+GGG + chr1.2:65204639-65204658 None:intergenic 70.0%
CCACCCGCCGGTGTAGTCTC+GGG - chr1.2:65204633-65204652 MS.gene07321:CDS 70.0%
GAGACTACACCGGCGGGTGG+TGG + chr1.2:65204633-65204652 None:intergenic 70.0%
CCCGAGACTACACCGGCGGG+TGG + chr1.2:65204636-65204655 None:intergenic 75.0%
CCCGCCGGTGTAGTCTCGGG+TGG - chr1.2:65204636-65204655 MS.gene07321:CDS 75.0%


Chromosome Type Strat End Strand Name
chr1.2 gene 65204266 65204920 65204266 ID=MS.gene07321
chr1.2 mRNA 65204266 65204920 65204266 ID=MS.gene07321.t1;Parent=MS.gene07321
chr1.2 exon 65204832 65204920 65204832 ID=MS.gene07321.t1.exon1;Parent=MS.gene07321.t1
chr1.2 CDS 65204832 65204920 65204832 ID=cds.MS.gene07321.t1;Parent=MS.gene07321.t1
chr1.2 exon 65204266 65204710 65204266 ID=MS.gene07321.t1.exon2;Parent=MS.gene07321.t1
chr1.2 CDS 65204266 65204710 65204266 ID=cds.MS.gene07321.t1;Parent=MS.gene07321.t1
Gene Sequence

>MS.gene07321

ATGACAAAAAGCGAGGTTGATCATCTGGAAGATGGATACCGATGGAGAAAGTACGGTCAAAAAGCTGTCAAAAATAGCCCTTTTCCAAGGTACTACTCATAAAAATTCTTTGAGTTCACACTCTTTTGGTTTAATTAATTTAGATTTTAGACCCAAAATCATTAGTAAACTGTAACATTTGTAATATGCTATGTGTTTATGTTTGTGTAGGAGCTACTATCGTTGCACCACTGCTGCATGTAATGTCAAGAAACGTGTGGAACGTTCTTACACTGATCCAAGCATTGTAGTCACAACATATGAAGGCCAACACACACATCCAAGTCCAACTATGTCCCGTTCCGCCTTTGCCGGAGTTCAAATACCACCACCCGCCGGTGTAGTCTCGGGTGGATTTCCAGCTACTAACTTTGGTTCAGTTTTGCAAGGAAACTACTTATCACAATATCATCAACAACCCTATCAACATCAACAACTACTTGTTAATACATTGTCCTCTTTGAATCACCCTTATAACAATTCTTCATCATTCAAGAATTCACCTTTTACTGCCCAAGAGAGAGTACAGCTTTGTAATCAAGGGACAACTGCATTTCTTAGGGATAATGGGCTACTTCAGGATGTTGTTCCTTCACATATGTTGAAAGAAGAGTAG

Protein sequence

>MS.gene07321.t1

MTKSEVDHLEDGYRWRKYGQKAVKNSPFPRSYYRCTTAACNVKKRVERSYTDPSIVVTTYEGQHTHPSPTMSRSAFAGVQIPPPAGVVSGGFPATNFGSVLQGNYLSQYHQQPYQHQQLLVNTLSSLNHPYNNSSSFKNSPFTAQERVQLCNQGTTAFLRDNGLLQDVVPSHMLKEE