Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene073301.t1 | XP_003610073.1 | 92 | 100 | 8 | 0 | 23 | 122 | 192 | 291 | 1.30E-35 | 159.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene073301.t1 | Q9LVD0 | 46.0 | 100 | 52 | 1 | 23 | 122 | 192 | 289 | 6.9e-09 | 61.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene073301.t1 | A0A072V324 | 92.0 | 100 | 8 | 0 | 23 | 122 | 183 | 282 | 9.6e-36 | 159.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049342 | MS.gene073301 | 0.817475 | 3.24E-52 | -1.69E-46 |
| MS.gene049343 | MS.gene073301 | 0.81273 | 3.66E-51 | -1.69E-46 |
| MS.gene049473 | MS.gene073301 | 0.835534 | 1.59E-56 | -1.69E-46 |
| MS.gene049824 | MS.gene073301 | 0.835529 | 1.59E-56 | -1.69E-46 |
| MS.gene049825 | MS.gene073301 | 0.885175 | 1.02E-71 | -1.69E-46 |
| MS.gene049873 | MS.gene073301 | 0.895596 | 8.25E-76 | -1.69E-46 |
| MS.gene050303 | MS.gene073301 | 0.810427 | 1.16E-50 | -1.69E-46 |
| MS.gene050427 | MS.gene073301 | 0.832931 | 7.13E-56 | -1.69E-46 |
| MS.gene050799 | MS.gene073301 | 0.817215 | 3.70E-52 | -1.69E-46 |
| MS.gene051700 | MS.gene073301 | 0.815671 | 8.20E-52 | -1.69E-46 |
| MS.gene051744 | MS.gene073301 | 0.802888 | 4.53E-49 | -1.69E-46 |
| MS.gene05188 | MS.gene073301 | 0.802126 | 6.50E-49 | -1.69E-46 |
| MS.gene052358 | MS.gene073301 | -0.802914 | 4.47E-49 | -1.69E-46 |
| MS.gene052519 | MS.gene073301 | 0.838268 | 3.18E-57 | -1.69E-46 |
| MS.gene052584 | MS.gene073301 | 0.809982 | 1.45E-50 | -1.69E-46 |
| MS.gene052717 | MS.gene073301 | 0.817803 | 2.73E-52 | -1.69E-46 |
| MS.gene052947 | MS.gene073301 | 0.8098 | 1.58E-50 | -1.69E-46 |
| MS.gene053122 | MS.gene073301 | 0.823167 | 1.60E-53 | -1.69E-46 |
| MS.gene053145 | MS.gene073301 | 0.805522 | 1.28E-49 | -1.69E-46 |
| MS.gene053226 | MS.gene073301 | 0.831219 | 1.89E-55 | -1.69E-46 |
| MS.gene053294 | MS.gene073301 | 0.844713 | 6.38E-59 | -1.69E-46 |
| MS.gene053401 | MS.gene073301 | 0.846967 | 1.56E-59 | -1.69E-46 |
| MS.gene053492 | MS.gene073301 | 0.805656 | 1.20E-49 | -1.69E-46 |
| MS.gene05365 | MS.gene073301 | 0.830609 | 2.67E-55 | -1.69E-46 |
| MS.gene053900 | MS.gene073301 | 0.821115 | 4.79E-53 | -1.69E-46 |
| MS.gene053995 | MS.gene073301 | 0.831278 | 1.83E-55 | -1.69E-46 |
| MS.gene055374 | MS.gene073301 | 0.849072 | 4.09E-60 | -1.69E-46 |
| MS.gene05548 | MS.gene073301 | 0.826743 | 2.29E-54 | -1.69E-46 |
| MS.gene055555 | MS.gene073301 | 0.885923 | 5.35E-72 | -1.69E-46 |
| MS.gene055580 | MS.gene073301 | -0.806872 | 6.66E-50 | -1.69E-46 |
| MS.gene055778 | MS.gene073301 | 0.808911 | 2.45E-50 | -1.69E-46 |
| MS.gene055808 | MS.gene073301 | 0.859293 | 4.57E-63 | -1.69E-46 |
| MS.gene056091 | MS.gene073301 | 0.874131 | 8.58E-68 | -1.69E-46 |
| MS.gene056215 | MS.gene073301 | 0.806559 | 7.76E-50 | -1.69E-46 |
| MS.gene056631 | MS.gene073301 | 0.811861 | 5.66E-51 | -1.69E-46 |
| MS.gene056642 | MS.gene073301 | 0.813108 | 3.02E-51 | -1.69E-46 |
| MS.gene05689 | MS.gene073301 | 0.815202 | 1.04E-51 | -1.69E-46 |
| MS.gene056986 | MS.gene073301 | 0.805898 | 1.07E-49 | -1.69E-46 |
| MS.gene057102 | MS.gene073301 | 0.819227 | 1.30E-52 | -1.69E-46 |
| MS.gene057705 | MS.gene073301 | 0.827235 | 1.75E-54 | -1.69E-46 |
| MS.gene058037 | MS.gene073301 | 0.82928 | 5.62E-55 | -1.69E-46 |
| MS.gene058498 | MS.gene073301 | 0.808846 | 2.53E-50 | -1.69E-46 |
| MS.gene058500 | MS.gene073301 | 0.802934 | 4.43E-49 | -1.69E-46 |
| MS.gene058625 | MS.gene073301 | 0.80618 | 9.32E-50 | -1.69E-46 |
| MS.gene05953 | MS.gene073301 | 0.810136 | 1.34E-50 | -1.69E-46 |
| MS.gene05954 | MS.gene073301 | 0.854576 | 1.12E-61 | -1.69E-46 |
| MS.gene059625 | MS.gene073301 | 0.802266 | 6.09E-49 | -1.69E-46 |
| MS.gene05985 | MS.gene073301 | -0.812492 | 4.13E-51 | -1.69E-46 |
| MS.gene059935 | MS.gene073301 | 0.891261 | 4.67E-74 | -1.69E-46 |
| MS.gene06001 | MS.gene073301 | 0.813727 | 2.21E-51 | -1.69E-46 |
| MS.gene060365 | MS.gene073301 | 0.808654 | 2.79E-50 | -1.69E-46 |
| MS.gene060429 | MS.gene073301 | 0.869173 | 3.77E-66 | -1.69E-46 |
| MS.gene060586 | MS.gene073301 | 0.803148 | 4.00E-49 | -1.69E-46 |
| MS.gene060763 | MS.gene073301 | 0.800268 | 1.56E-48 | -1.69E-46 |
| MS.gene060830 | MS.gene073301 | 0.850611 | 1.52E-60 | -1.69E-46 |
| MS.gene060917 | MS.gene073301 | 0.815043 | 1.13E-51 | -1.69E-46 |
| MS.gene06094 | MS.gene073301 | 0.803253 | 3.81E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene073301.t1 | MTR_4g127640 | 96.000 | 100 | 4 | 0 | 23 | 122 | 183 | 282 | 1.64e-54 | 172 |
| MS.gene073301.t1 | MTR_4g127640 | 96.000 | 100 | 4 | 0 | 23 | 122 | 201 | 300 | 2.16e-54 | 172 |
| MS.gene073301.t1 | MTR_4g127640 | 96.000 | 100 | 4 | 0 | 23 | 122 | 192 | 291 | 2.32e-54 | 172 |
| MS.gene073301.t1 | MTR_4g007420 | 60.000 | 100 | 33 | 3 | 23 | 122 | 192 | 284 | 6.86e-29 | 106 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene073301.t1 | AT5G57280 | 55.000 | 100 | 43 | 2 | 23 | 122 | 192 | 289 | 1.13e-27 | 103 |
Find 25 sgRNAs with CRISPR-Local
Find 86 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTCTTTCTCTGCTTCTTAA+AGG | 0.231198 | 8.1:-5199960 | None:intergenic |
| AGAAAAGAGTTTCTTGTTCT+CGG | 0.339903 | 8.1:+5199336 | MS.gene073301:CDS |
| GAGCATGGATTTCCACTAAC+TGG | 0.363568 | 8.1:+5199282 | MS.gene073301:CDS |
| TTCTTTCTCTGCTTCTTAAA+GGG | 0.367013 | 8.1:-5199959 | None:intergenic |
| GACAATTGTTCTCCAGTTAG+TGG | 0.397912 | 8.1:-5199294 | None:intergenic |
| GAGTTTCTTGTTCTCGGATG+TGG | 0.418174 | 8.1:+5199342 | MS.gene073301:CDS |
| TCGTTTCCGACCAGTGTACT+TGG | 0.444474 | 8.1:-5200065 | None:intergenic |
| TGCAGGTGCGTTTGTCAGAC+AGG | 0.445651 | 8.1:+5199930 | MS.gene073301:intron |
| TTCATCTTCGCTCTCTTCAT+CGG | 0.463844 | 8.1:-5199424 | None:intergenic |
| AAGGATCAAATGAGAAGAAG+AGG | 0.492941 | 8.1:+5200022 | MS.gene073301:CDS |
| TTGCATAGCCTTCTTGAGCA+TGG | 0.504441 | 8.1:+5199267 | MS.gene073301:intron |
| TAATAAGAGCAGCAAGGGAA+AGG | 0.520324 | 8.1:+5199982 | MS.gene073301:CDS |
| TACACTGGTCGGAAACGAAA+GGG | 0.531240 | 8.1:+5200070 | MS.gene073301:CDS |
| AAGAATAATAAGAGCAGCAA+GGG | 0.533361 | 8.1:+5199977 | MS.gene073301:CDS |
| AGAGCAGCAAGGGAAAGGAA+TGG | 0.589939 | 8.1:+5199987 | MS.gene073301:CDS |
| GGAATGGATACTGAGGAAGA+AGG | 0.594390 | 8.1:+5200003 | MS.gene073301:CDS |
| GTGGAAATCCATGCTCAAGA+AGG | 0.597891 | 8.1:-5199275 | None:intergenic |
| CCAGTGTACTTGGTATCTAG+AGG | 0.603613 | 8.1:-5200055 | None:intergenic |
| GTACACTGGTCGGAAACGAA+AGG | 0.604131 | 8.1:+5200069 | MS.gene073301:CDS |
| AAAGAATAATAAGAGCAGCA+AGG | 0.610322 | 8.1:+5199976 | MS.gene073301:CDS |
| TAGATACCAAGTACACTGGT+CGG | 0.625666 | 8.1:+5200059 | MS.gene073301:CDS |
| ACGAAAGCATCCTTGTCCAA+AGG | 0.634791 | 8.1:+5199375 | MS.gene073301:CDS |
| CAGTGTACTTGGTATCTAGA+GGG | 0.642930 | 8.1:-5200054 | None:intergenic |
| AGGGAAAGGAATGGATACTG+AGG | 0.667986 | 8.1:+5199996 | MS.gene073301:CDS |
| CCTCTAGATACCAAGTACAC+TGG | 0.682621 | 8.1:+5200055 | MS.gene073301:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTATTATTTTTCTTATAAG+TGG | + | chr8.1:5199743-5199762 | MS.gene073301:intron | 10.0% |
| !! | ATAAAGATAAAAGTAAAAGA+TGG | + | chr8.1:5198915-5198934 | MS.gene073301:intron | 15.0% |
| !! | ATCACTATCTATTAATAAAA+TGG | + | chr8.1:5199606-5199625 | MS.gene073301:intron | 15.0% |
| !! | CATGCATATAATTTAAATTA+TGG | + | chr8.1:5199704-5199723 | MS.gene073301:intron | 15.0% |
| !!! | CATATCTGAAATAAATTTAT+GGG | - | chr8.1:5199826-5199845 | None:intergenic | 15.0% |
| !!! | TCATATCTGAAATAAATTTA+TGG | - | chr8.1:5199827-5199846 | None:intergenic | 15.0% |
| !!! | TTATTGTTACTTTCATTTTT+AGG | - | chr8.1:5198853-5198872 | None:intergenic | 15.0% |
| !! | GAAAATTACTCTGATTAAAT+TGG | + | chr8.1:5198623-5198642 | MS.gene073301:intron | 20.0% |
| !! | TAAGTTGTAACAAAATGAAT+AGG | - | chr8.1:5199552-5199571 | None:intergenic | 20.0% |
| !!! | TAATTTTCTTACCAAATCAA+GGG | - | chr8.1:5198611-5198630 | None:intergenic | 20.0% |
| !!! | TTTAGTTTAAAAAATACTGC+AGG | + | chr8.1:5199913-5199932 | MS.gene073301:intron | 20.0% |
| ! | AAGTAAATTGCACTCTTTAA+AGG | - | chr8.1:5199640-5199659 | None:intergenic | 25.0% |
| ! | AATAAAATAAGAGTGAGAAG+AGG | + | chr8.1:5198984-5199003 | MS.gene073301:intron | 25.0% |
| ! | AATATAAGCTCGATACAAAA+AGG | - | chr8.1:5199895-5199914 | None:intergenic | 25.0% |
| ! | ATAAAATAAGAGTGAGAAGA+GGG | + | chr8.1:5198985-5199004 | MS.gene073301:intron | 25.0% |
| ! | TCTGATTAAATTGGAATTGA+AGG | + | chr8.1:5198632-5198651 | MS.gene073301:intron | 25.0% |
| !! | GTAATTTTCTTACCAAATCA+AGG | - | chr8.1:5198612-5198631 | None:intergenic | 25.0% |
| !!! | TGTTTTTGTTTTGTTCGATT+TGG | + | chr8.1:5199212-5199231 | MS.gene073301:intron | 25.0% |
| AAAGAATAATAAGAGCAGCA+AGG | + | chr8.1:5199976-5199995 | MS.gene073301:CDS | 30.0% | |
| AAGAATAATAAGAGCAGCAA+GGG | + | chr8.1:5199977-5199996 | MS.gene073301:CDS | 30.0% | |
| AGAAAAGAGTTTCTTGTTCT+CGG | + | chr8.1:5199336-5199355 | MS.gene073301:CDS | 30.0% | |
| AGAGTGCAATTTACTTTACA+TGG | + | chr8.1:5199644-5199663 | MS.gene073301:intron | 30.0% | |
| ATTCTTTCTCTGCTTCTTAA+AGG | - | chr8.1:5199963-5199982 | None:intergenic | 30.0% | |
| GATTAAATTGGAATTGAAGG+TGG | + | chr8.1:5198635-5198654 | MS.gene073301:intron | 30.0% | |
| TTCTTTCTCTGCTTCTTAAA+GGG | - | chr8.1:5199962-5199981 | None:intergenic | 30.0% | |
| ! | CAGAATATTCTCTGTCTTTT+CGG | - | chr8.1:5199066-5199085 | None:intergenic | 30.0% |
| ! | TGTCTTTTCGGTGAAAATTT+CGG | - | chr8.1:5199054-5199073 | None:intergenic | 30.0% |
| ! | TTCATCTTCAGTTTTACCTT+TGG | - | chr8.1:5199394-5199413 | None:intergenic | 30.0% |
| AAAGAAAGAAAAAAGGACCC+TGG | + | chr8.1:5198745-5198764 | MS.gene073301:intron | 35.0% | |
| AAGGATCAAATGAGAAGAAG+AGG | + | chr8.1:5200022-5200041 | MS.gene073301:CDS | 35.0% | |
| AATGCAACTCTCACTTAACA+TGG | - | chr8.1:5199788-5199807 | None:intergenic | 35.0% | |
| ATAAGCTCGATACAAAAAGG+AGG | - | chr8.1:5199892-5199911 | None:intergenic | 35.0% | |
| CGTGGAGAAAGAAAGAAAAA+AGG | + | chr8.1:5198738-5198757 | MS.gene073301:intron | 35.0% | |
| GAATAGGTAGTGATCTTTGA+AGG | - | chr8.1:5199536-5199555 | None:intergenic | 35.0% | |
| GATCCTTAGGTCAAAAATTG+GGG | + | chr8.1:5199108-5199127 | MS.gene073301:intron | 35.0% | |
| GGATCCTTAGGTCAAAAATT+GGG | + | chr8.1:5199107-5199126 | MS.gene073301:intron | 35.0% | |
| GGTATGACATGTAATGTATC+TGG | + | chr8.1:5199129-5199148 | MS.gene073301:intron | 35.0% | |
| TAAGCTCGATACAAAAAGGA+GGG | - | chr8.1:5199891-5199910 | None:intergenic | 35.0% | |
| TAAGTGAGAGTTGCATTTCA+AGG | + | chr8.1:5199791-5199810 | MS.gene073301:intron | 35.0% | |
| TGGAATTGAAGGTGGTTAAA+TGG | + | chr8.1:5198643-5198662 | MS.gene073301:intron | 35.0% | |
| TGGATCCTTAGGTCAAAAAT+TGG | + | chr8.1:5199106-5199125 | MS.gene073301:intron | 35.0% | |
| ! | AGGTGGTTAAATGGTGTTAA+TGG | + | chr8.1:5198652-5198671 | MS.gene073301:intron | 35.0% |
| ! | ATACCCCAATTTTTGACCTA+AGG | - | chr8.1:5199114-5199133 | None:intergenic | 35.0% |
| ! | GTTAAATGGTGTTAATGGTG+AGG | + | chr8.1:5198657-5198676 | MS.gene073301:intron | 35.0% |
| ! | TTCAGTTTTACCTTTGGACA+AGG | - | chr8.1:5199388-5199407 | None:intergenic | 35.0% |
| ATGAGTCAAAATCCAAGTCC+AGG | - | chr8.1:5198766-5198785 | None:intergenic | 40.0% | |
| CAGTGTACTTGGTATCTAGA+GGG | - | chr8.1:5200057-5200076 | None:intergenic | 40.0% | |
| CCTGAATCGGAACAAAAATG+AGG | + | chr8.1:5199008-5199027 | MS.gene073301:intron | 40.0% | |
| GAAACATTCATCGTGCCTAT+TGG | - | chr8.1:5199501-5199520 | None:intergenic | 40.0% | |
| GACAATTGTTCTCCAGTTAG+TGG | - | chr8.1:5199297-5199316 | None:intergenic | 40.0% | |
| TAATAAGAGCAGCAAGGGAA+AGG | + | chr8.1:5199982-5200001 | MS.gene073301:CDS | 40.0% | |
| TAGATACCAAGTACACTGGT+CGG | + | chr8.1:5200059-5200078 | MS.gene073301:CDS | 40.0% | |
| TCGGTTCAGGAATTTCCAAT+AGG | + | chr8.1:5199483-5199502 | MS.gene073301:intron | 40.0% | |
| TCTCACCACATCTGTGTATT+CGG | + | chr8.1:5199464-5199483 | MS.gene073301:intron | 40.0% | |
| TGAGTCAAAATCCAAGTCCA+GGG | - | chr8.1:5198765-5198784 | None:intergenic | 40.0% | |
| TTCATCTTCGCTCTCTTCAT+CGG | - | chr8.1:5199427-5199446 | None:intergenic | 40.0% | |
| ! | ACGCGTTTGGTGATTGTTAT+GGG | + | chr8.1:5198680-5198699 | MS.gene073301:intron | 40.0% |
| !! | CCTCATTTTTGTTCCGATTC+AGG | - | chr8.1:5199011-5199030 | None:intergenic | 40.0% |
| !!! | GGACTTGGATTTTGACTCAT+TGG | + | chr8.1:5198766-5198785 | MS.gene073301:intron | 40.0% |
| ACATGTGTCAGTGGATCCTT+AGG | + | chr8.1:5199095-5199114 | MS.gene073301:intron | 45.0% | |
| AGAAAAAAGGACCCTGGACT+TGG | + | chr8.1:5198751-5198770 | MS.gene073301:intron | 45.0% | |
| AGGGAAAGGAATGGATACTG+AGG | + | chr8.1:5199996-5200015 | MS.gene073301:CDS | 45.0% | |
| CACATCTGTGTATTCGGTTC+AGG | + | chr8.1:5199470-5199489 | MS.gene073301:intron | 45.0% | |
| CAGAGAATATTCTGTGCCAG+AGG | + | chr8.1:5199072-5199091 | MS.gene073301:intron | 45.0% | |
| CCAGTGTACTTGGTATCTAG+AGG | - | chr8.1:5200058-5200077 | None:intergenic | 45.0% | |
| CCTCTAGATACCAAGTACAC+TGG | + | chr8.1:5200055-5200074 | MS.gene073301:CDS | 45.0% | |
| CTGAACCGAATACACAGATG+TGG | - | chr8.1:5199472-5199491 | None:intergenic | 45.0% | |
| GAGCATGGATTTCCACTAAC+TGG | + | chr8.1:5199282-5199301 | MS.gene073301:CDS | 45.0% | |
| GAGTTTCTTGTTCTCGGATG+TGG | + | chr8.1:5199342-5199361 | MS.gene073301:CDS | 45.0% | |
| GCATTGCACAATCAGTGTCA+AGG | - | chr8.1:5198719-5198738 | None:intergenic | 45.0% | |
| GGAATGGATACTGAGGAAGA+AGG | + | chr8.1:5200003-5200022 | MS.gene073301:CDS | 45.0% | |
| GTGGAAATCCATGCTCAAGA+AGG | - | chr8.1:5199278-5199297 | None:intergenic | 45.0% | |
| TACACTGGTCGGAAACGAAA+GGG | + | chr8.1:5200070-5200089 | MS.gene073301:CDS | 45.0% | |
| TTGCATAGCCTTCTTGAGCA+TGG | + | chr8.1:5199267-5199286 | MS.gene073301:intron | 45.0% | |
| ! | GACGCGTTTGGTGATTGTTA+TGG | + | chr8.1:5198679-5198698 | MS.gene073301:intron | 45.0% |
| !! | ACGAAAGCATCCTTGTCCAA+AGG | + | chr8.1:5199375-5199394 | MS.gene073301:CDS | 45.0% |
| AGAGCAGCAAGGGAAAGGAA+TGG | + | chr8.1:5199987-5200006 | MS.gene073301:CDS | 50.0% | |
| AGTGAGAAGAGGGCCTGAAT+CGG | + | chr8.1:5198995-5199014 | MS.gene073301:intron | 50.0% | |
| ATCCACTGACACATGTCCTC+TGG | - | chr8.1:5199091-5199110 | None:intergenic | 50.0% | |
| CGGTGAAAATTTCGGCAGAG+AGG | - | chr8.1:5199046-5199065 | None:intergenic | 50.0% | |
| GTACACTGGTCGGAAACGAA+AGG | + | chr8.1:5200069-5200088 | MS.gene073301:CDS | 50.0% | |
| GTTAATGGTGAGGACGCGTT+TGG | + | chr8.1:5198667-5198686 | MS.gene073301:intron | 50.0% | |
| TCGTTTCCGACCAGTGTACT+TGG | - | chr8.1:5200068-5200087 | None:intergenic | 50.0% | |
| ! | GACACTGATTGTGCAATGCG+TGG | + | chr8.1:5198720-5198739 | MS.gene073301:intron | 50.0% |
| TGCAGGTGCGTTTGTCAGAC+AGG | + | chr8.1:5199930-5199949 | MS.gene073301:intron | 55.0% | |
| TGCCAGAGGACATGTGTCAG+TGG | + | chr8.1:5199086-5199105 | MS.gene073301:intron | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.1 | gene | 5198602 | 5200102 | 5198602 | ID=MS.gene073301 |
| chr8.1 | mRNA | 5198602 | 5200102 | 5198602 | ID=MS.gene073301.t1;Parent=MS.gene073301 |
| chr8.1 | exon | 5198602 | 5198618 | 5198602 | ID=MS.gene073301.t1.exon1;Parent=MS.gene073301.t1 |
| chr8.1 | CDS | 5198602 | 5198618 | 5198602 | ID=cds.MS.gene073301.t1;Parent=MS.gene073301.t1 |
| chr8.1 | exon | 5199275 | 5199458 | 5199275 | ID=MS.gene073301.t1.exon2;Parent=MS.gene073301.t1 |
| chr8.1 | CDS | 5199275 | 5199458 | 5199275 | ID=cds.MS.gene073301.t1;Parent=MS.gene073301.t1 |
| chr8.1 | exon | 5199935 | 5200102 | 5199935 | ID=MS.gene073301.t1.exon3;Parent=MS.gene073301.t1 |
| chr8.1 | CDS | 5199935 | 5200102 | 5199935 | ID=cds.MS.gene073301.t1;Parent=MS.gene073301.t1 |
| Gene Sequence |
| Protein sequence |
