Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene073966.t1 | XP_004488764.1 | 97.9 | 144 | 3 | 0 | 1 | 144 | 251 | 394 | 6.50E-74 | 286.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene073966.t1 | G7IQY1 | 98.6 | 144 | 2 | 0 | 1 | 144 | 249 | 392 | 4.7e-74 | 286.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049150 | MS.gene073966 | 0.842261 | 2.88E-58 | -1.69E-46 |
| MS.gene049151 | MS.gene073966 | 0.827054 | 1.93E-54 | -1.69E-46 |
| MS.gene049153 | MS.gene073966 | 0.838189 | 3.33E-57 | -1.69E-46 |
| MS.gene049260 | MS.gene073966 | 0.803656 | 3.14E-49 | -1.69E-46 |
| MS.gene049378 | MS.gene073966 | 0.836328 | 9.98E-57 | -1.69E-46 |
| MS.gene049758 | MS.gene073966 | 0.871469 | 6.67E-67 | -1.69E-46 |
| MS.gene049910 | MS.gene073966 | 0.841068 | 5.94E-58 | -1.69E-46 |
| MS.gene050226 | MS.gene073966 | 0.803178 | 3.95E-49 | -1.69E-46 |
| MS.gene050227 | MS.gene073966 | 0.803219 | 3.87E-49 | -1.69E-46 |
| MS.gene050228 | MS.gene073966 | 0.805909 | 1.06E-49 | -1.69E-46 |
| MS.gene050301 | MS.gene073966 | 0.840734 | 7.27E-58 | -1.69E-46 |
| MS.gene050464 | MS.gene073966 | 0.825652 | 4.17E-54 | -1.69E-46 |
| MS.gene050529 | MS.gene073966 | 0.800822 | 1.20E-48 | -1.69E-46 |
| MS.gene050623 | MS.gene073966 | -0.821711 | 3.49E-53 | -1.69E-46 |
| MS.gene050642 | MS.gene073966 | 0.843919 | 1.04E-58 | -1.69E-46 |
| MS.gene050820 | MS.gene073966 | 0.810908 | 9.12E-51 | -1.69E-46 |
| MS.gene05119 | MS.gene073966 | -0.834549 | 2.81E-56 | -1.69E-46 |
| MS.gene051582 | MS.gene073966 | 0.811582 | 6.51E-51 | -1.69E-46 |
| MS.gene051663 | MS.gene073966 | 0.812422 | 4.27E-51 | -1.69E-46 |
| MS.gene051860 | MS.gene073966 | 0.837503 | 5.00E-57 | -1.69E-46 |
| MS.gene051983 | MS.gene073966 | 0.893027 | 9.21E-75 | -1.69E-46 |
| MS.gene052077 | MS.gene073966 | 0.85379 | 1.89E-61 | -1.69E-46 |
| MS.gene052178 | MS.gene073966 | 0.801675 | 8.05E-49 | -1.69E-46 |
| MS.gene052188 | MS.gene073966 | 0.837105 | 6.33E-57 | -1.69E-46 |
| MS.gene052340 | MS.gene073966 | 0.832857 | 7.44E-56 | -1.69E-46 |
| MS.gene05316 | MS.gene073966 | 0.823629 | 1.25E-53 | -1.69E-46 |
| MS.gene053494 | MS.gene073966 | 0.811041 | 8.54E-51 | -1.69E-46 |
| MS.gene053557 | MS.gene073966 | 0.833418 | 5.39E-56 | -1.69E-46 |
| MS.gene053836 | MS.gene073966 | 0.86671 | 2.34E-65 | -1.69E-46 |
| MS.gene053928 | MS.gene073966 | 0.840513 | 8.31E-58 | -1.69E-46 |
| MS.gene054123 | MS.gene073966 | 0.809019 | 2.33E-50 | -1.69E-46 |
| MS.gene054183 | MS.gene073966 | 0.800265 | 1.56E-48 | -1.69E-46 |
| MS.gene054930 | MS.gene073966 | 0.867695 | 1.13E-65 | -1.69E-46 |
| MS.gene055277 | MS.gene073966 | 0.807108 | 5.94E-50 | -1.69E-46 |
| MS.gene055390 | MS.gene073966 | 0.800917 | 1.15E-48 | -1.69E-46 |
| MS.gene055422 | MS.gene073966 | 0.845652 | 3.55E-59 | -1.69E-46 |
| MS.gene055428 | MS.gene073966 | 0.81414 | 1.79E-51 | -1.69E-46 |
| MS.gene05553 | MS.gene073966 | 0.843312 | 1.51E-58 | -1.69E-46 |
| MS.gene055604 | MS.gene073966 | 0.802211 | 6.25E-49 | -1.69E-46 |
| MS.gene055712 | MS.gene073966 | 0.824967 | 6.06E-54 | -1.69E-46 |
| MS.gene055859 | MS.gene073966 | 0.811422 | 7.06E-51 | -1.69E-46 |
| MS.gene056407 | MS.gene073966 | 0.830411 | 2.98E-55 | -1.69E-46 |
| MS.gene056612 | MS.gene073966 | 0.816768 | 4.67E-52 | -1.69E-46 |
| MS.gene056659 | MS.gene073966 | 0.816109 | 6.55E-52 | -1.69E-46 |
| MS.gene056723 | MS.gene073966 | 0.835776 | 1.38E-56 | -1.69E-46 |
| MS.gene056979 | MS.gene073966 | 0.883968 | 2.86E-71 | -1.69E-46 |
| MS.gene05702 | MS.gene073966 | 0.814442 | 1.54E-51 | -1.69E-46 |
| MS.gene057121 | MS.gene073966 | 0.834228 | 3.38E-56 | -1.69E-46 |
| MS.gene057396 | MS.gene073966 | 0.824945 | 6.13E-54 | -1.69E-46 |
| MS.gene057439 | MS.gene073966 | 0.809922 | 1.49E-50 | -1.69E-46 |
| MS.gene057448 | MS.gene073966 | 0.831579 | 1.54E-55 | -1.69E-46 |
| MS.gene057449 | MS.gene073966 | 0.812382 | 4.36E-51 | -1.69E-46 |
| MS.gene057450 | MS.gene073966 | 0.839724 | 1.34E-57 | -1.69E-46 |
| MS.gene057469 | MS.gene073966 | 0.812159 | 4.88E-51 | -1.69E-46 |
| MS.gene058002 | MS.gene073966 | 0.853496 | 2.30E-61 | -1.69E-46 |
| MS.gene05811 | MS.gene073966 | 0.828738 | 7.61E-55 | -1.69E-46 |
| MS.gene058142 | MS.gene073966 | 0.853011 | 3.17E-61 | -1.69E-46 |
| MS.gene058276 | MS.gene073966 | 0.814299 | 1.65E-51 | -1.69E-46 |
| MS.gene058435 | MS.gene073966 | 0.801729 | 7.85E-49 | -1.69E-46 |
| MS.gene058710 | MS.gene073966 | 0.814711 | 1.34E-51 | -1.69E-46 |
| MS.gene058845 | MS.gene073966 | 0.809289 | 2.04E-50 | -1.69E-46 |
| MS.gene05907 | MS.gene073966 | 0.832723 | 8.03E-56 | -1.69E-46 |
| MS.gene059247 | MS.gene073966 | 0.815057 | 1.12E-51 | -1.69E-46 |
| MS.gene059285 | MS.gene073966 | 0.804948 | 1.69E-49 | -1.69E-46 |
| MS.gene059420 | MS.gene073966 | 0.80688 | 6.63E-50 | -1.69E-46 |
| MS.gene05984 | MS.gene073966 | 0.849907 | 2.39E-60 | -1.69E-46 |
| MS.gene059894 | MS.gene073966 | 0.84043 | 8.74E-58 | -1.69E-46 |
| MS.gene059899 | MS.gene073966 | 0.842216 | 2.96E-58 | -1.69E-46 |
| MS.gene061002 | MS.gene073966 | 0.832429 | 9.50E-56 | -1.69E-46 |
| MS.gene061049 | MS.gene073966 | 0.843436 | 1.40E-58 | -1.69E-46 |
| MS.gene061051 | MS.gene073966 | -0.800086 | 1.70E-48 | -1.69E-46 |
| MS.gene061154 | MS.gene073966 | 0.82506 | 5.76E-54 | -1.69E-46 |
| MS.gene061159 | MS.gene073966 | 0.840832 | 6.85E-58 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene073966.t1 | MTR_2g066060 | 98.611 | 144 | 2 | 0 | 1 | 144 | 249 | 392 | 1.17e-100 | 294 |
| MS.gene073966.t1 | MTR_7g114070 | 32.203 | 118 | 78 | 1 | 23 | 140 | 220 | 335 | 2.68e-13 | 65.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene073966.t1 | AT1G56180 | 82.639 | 144 | 25 | 0 | 1 | 144 | 246 | 389 | 2.13e-85 | 255 |
| MS.gene073966.t1 | AT1G56180 | 78.000 | 50 | 11 | 0 | 1 | 50 | 246 | 295 | 6.80e-24 | 94.4 |
| MS.gene073966.t1 | AT5G27290 | 29.452 | 146 | 91 | 3 | 1 | 140 | 197 | 336 | 4.23e-14 | 68.2 |
Find 0 sgRNAs with CRISPR-Local
Find 157 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | CTATTAGTAATAGTATAAAT+AGG | - | 14710:1777-1796 | MS.gene073966:intergenic | 15.0% |
| !! | TTCATGATATGATAATTTAT+TGG | + | 14710:346-365 | MS.gene073966:intron | 15.0% |
| !! | TGAAATGAATCTATAATTGT+TGG | - | 14710:653-672 | MS.gene073966:intergenic | 20.0% |
| !!! | AAAATCATGAAGTTTGTTAA+GGG | + | 14710:1457-1476 | MS.gene073966:intron | 20.0% |
| !!! | ATTTGTTTTCCTATCTAATT+AGG | - | 14710:1223-1242 | MS.gene073966:intergenic | 20.0% |
| !!! | GATATGTTTTATGTAATCAA+TGG | + | 14710:2251-2270 | MS.gene073966:intron | 20.0% |
| !!! | TAAAATCATGAAGTTTGTTA+AGG | + | 14710:1456-1475 | MS.gene073966:intron | 20.0% |
| !!! | TGTTTGTTTTCCAAATTATA+AGG | - | 14710:1035-1054 | MS.gene073966:intergenic | 20.0% |
| !!! | TTTTATGTAATCAATGGTTT+AGG | + | 14710:2257-2276 | MS.gene073966:intron | 20.0% |
| ! | AAACAAAAACAAGATACTTC+AGG | - | 14710:2217-2236 | MS.gene073966:intergenic | 25.0% |
| ! | AATAAAAAAATACCTGTCCT+TGG | - | 14710:319-338 | MS.gene073966:intergenic | 25.0% |
| ! | ACAACAAGTAGAATTGAAAT+AGG | - | 14710:2069-2088 | MS.gene073966:intergenic | 25.0% |
| ! | ACGAAAATGATGTCAAATAA+TGG | - | 14710:729-748 | MS.gene073966:intergenic | 25.0% |
| ! | ACTACAAATCCTAATTAGAT+AGG | + | 14710:1211-1230 | MS.gene073966:intron | 25.0% |
| ! | AGCAATGTCATCAATAATAA+TGG | + | 14710:582-601 | MS.gene073966:intron | 25.0% |
| ! | AGGTAAAAAATTTAGCATCA+CGG | - | 14710:2472-2491 | MS.gene073966:intergenic | 25.0% |
| ! | GATAGGAAAACAAATTGATA+TGG | + | 14710:1228-1247 | MS.gene073966:intron | 25.0% |
| ! | GTACCATATATTGAAATCAT+GGG | + | 14710:1669-1688 | MS.gene073966:intron | 25.0% |
| ! | TACCATATATTGAAATCATG+GGG | + | 14710:1670-1689 | MS.gene073966:intron | 25.0% |
| ! | TCAAATAGATGAAATAGACT+AGG | - | 14710:391-410 | MS.gene073966:intergenic | 25.0% |
| !! | GTTCTTTTTGCCTTATAATT+TGG | + | 14710:1022-1041 | MS.gene073966:intron | 25.0% |
| !!! | AAATCTTTGTTTTTTAGGCA+GGG | + | 14710:755-774 | MS.gene073966:intron | 25.0% |
| !!! | AATCTTATAATTTGCTCAAG+TGG | + | 14710:2544-2563 | MS.gene073966:CDS | 25.0% |
| !!! | GCAGTAAATCTTTGTTTTTT+AGG | + | 14710:750-769 | MS.gene073966:intron | 25.0% |
| !!! | TAAATCTTTGTTTTTTAGGC+AGG | + | 14710:754-773 | MS.gene073966:intron | 25.0% |
| AAAACAAATTGATATGGCCT+GGG | + | 14710:1234-1253 | MS.gene073966:intron | 30.0% | |
| AACAGAAACAGTTTATTGTC+TGG | + | 14710:2149-2168 | MS.gene073966:intron | 30.0% | |
| AACCTAGAGATTAATAGCTT+AGG | - | 14710:1970-1989 | MS.gene073966:intergenic | 30.0% | |
| AACTTTAATAGGGCTAAAAG+AGG | - | 14710:1090-1109 | MS.gene073966:intergenic | 30.0% | |
| AAGATACTTCAGGTGAAAAA+AGG | - | 14710:2207-2226 | MS.gene073966:intergenic | 30.0% | |
| ACTCCAAATTCGAATCTAAT+AGG | + | 14710:1800-1819 | MS.gene073966:intron | 30.0% | |
| AGAAATAGAGAAGGACAAAA+TGG | + | 14710:1330-1349 | MS.gene073966:intron | 30.0% | |
| AGATACTTCAGGTGAAAAAA+GGG | - | 14710:2206-2225 | MS.gene073966:intergenic | 30.0% | |
| CAAAATGCATCAAAATTGTC+CGG | - | 14710:414-433 | MS.gene073966:intergenic | 30.0% | |
| CATCTTCTATTGAGATTGTT+AGG | - | 14710:1928-1947 | MS.gene073966:intergenic | 30.0% | |
| CTCCAAATTCGAATCTAATA+GGG | + | 14710:1801-1820 | MS.gene073966:intron | 30.0% | |
| GAAACCCTGTAACTTTAATA+GGG | - | 14710:1100-1119 | MS.gene073966:intergenic | 30.0% | |
| GAAATAGAGAAGGACAAAAT+GGG | + | 14710:1331-1350 | MS.gene073966:intron | 30.0% | |
| GAAGGATTAGAATAAAAACG+AGG | - | 14710:467-486 | MS.gene073966:intergenic | 30.0% | |
| GGTACCATATATTGAAATCA+TGG | + | 14710:1668-1687 | MS.gene073966:intron | 30.0% | |
| GTCTATTTCATCTATTTGAC+CGG | + | 14710:392-411 | MS.gene073966:intron | 30.0% | |
| TACCCCATGATTTCAATATA+TGG | - | 14710:1675-1694 | MS.gene073966:intergenic | 30.0% | |
| TATTGAGATTGTTAGGAGAA+AGG | - | 14710:1921-1940 | MS.gene073966:intergenic | 30.0% | |
| TCGTCTAATCATGTATTACA+AGG | - | 14710:953-972 | MS.gene073966:intergenic | 30.0% | |
| TCTATTATAAGAATGCTGAG+TGG | + | 14710:1415-1434 | MS.gene073966:intron | 30.0% | |
| TGAAACCCTGTAACTTTAAT+AGG | - | 14710:1101-1120 | MS.gene073966:intergenic | 30.0% | |
| TGTGTTAAGAGAAATAGAGA+AGG | + | 14710:1321-1340 | MS.gene073966:intron | 30.0% | |
| TGTTTATTGCAAGAACGTTA+AGG | - | 14710:2492-2511 | MS.gene073966:intergenic | 30.0% | |
| TTAGCCCTATTAAAGTTACA+GGG | + | 14710:1093-1112 | MS.gene073966:intron | 30.0% | |
| TTCCCTATTAGATTCGAATT+TGG | - | 14710:1806-1825 | MS.gene073966:intergenic | 30.0% | |
| TTCCTAAGCTATTAATCTCT+AGG | + | 14710:1965-1984 | MS.gene073966:intron | 30.0% | |
| TTTAGCCCTATTAAAGTTAC+AGG | + | 14710:1092-1111 | MS.gene073966:intron | 30.0% | |
| ! | TACCATGTTTTGTAATGCTT+TGG | - | 14710:1612-1631 | MS.gene073966:intergenic | 30.0% |
| ! | TAGTGCTGCTAGTATAATTT+CGG | + | 14710:550-569 | MS.gene073966:intron | 30.0% |
| ! | TGAAGAATCTAGAACTATCT+CGG | - | 14710:2030-2049 | MS.gene073966:intergenic | 30.0% |
| ! | TGAATCTATAATTGTTGGCT+TGG | - | 14710:648-667 | MS.gene073966:intergenic | 30.0% |
| AAAACATGGTAGCATAGTGA+TGG | + | 14710:1621-1640 | MS.gene073966:intron | 35.0% | |
| AAACATGGTAGCATAGTGAT+GGG | + | 14710:1622-1641 | MS.gene073966:intron | 35.0% | |
| AACTGTACGAATGAAGTCTA+AGG | - | 14710:1005-1024 | MS.gene073966:intergenic | 35.0% | |
| AAGTAGCTAGGCATATAATG+GGG | + | 14710:1292-1311 | MS.gene073966:intron | 35.0% | |
| AATGTCTTGTAGTACGTTGA+TGG | - | 14710:1888-1907 | MS.gene073966:intergenic | 35.0% | |
| ACAAAATGGGAATATCCACA+TGG | + | 14710:1344-1363 | MS.gene073966:intron | 35.0% | |
| AGAAACAGTTTATTGTCTGG+AGG | + | 14710:2152-2171 | MS.gene073966:intron | 35.0% | |
| AGAAGTAGCTAGGCATATAA+TGG | + | 14710:1290-1309 | MS.gene073966:intron | 35.0% | |
| AGAATAGTATCATGCAGAGA+AGG | - | 14710:485-504 | MS.gene073966:intergenic | 35.0% | |
| AGATGTCTAATCAAGCAAGA+TGG | + | 14710:2511-2530 | MS.gene073966:intron | 35.0% | |
| AGCAACACAATGGTCAAAAA+AGG | + | 14710:1560-1579 | MS.gene073966:intron | 35.0% | |
| ATTGAATGCTGCATCAGTTA+GGG | + | 14710:919-938 | MS.gene073966:intron | 35.0% | |
| CCAATAGTTGCAATGCAAAT+GGG | + | 14710:290-309 | MS.gene073966:CDS | 35.0% | |
| GAAAACAAATTGATATGGCC+TGG | + | 14710:1233-1252 | MS.gene073966:intron | 35.0% | |
| GAAGTAGCTAGGCATATAAT+GGG | + | 14710:1291-1310 | MS.gene073966:intron | 35.0% | |
| GAATCAAGCACTAGTTAAAG+AGG | + | 14710:886-905 | MS.gene073966:intron | 35.0% | |
| TCCAATAGTTGCAATGCAAA+TGG | + | 14710:289-308 | MS.gene073966:CDS | 35.0% | |
| TTTCTGTTTAACATCGCCAT+TGG | - | 14710:2137-2156 | MS.gene073966:intergenic | 35.0% | |
| ! | CATGGGGTATTTGATAAAGA+GGG | + | 14710:1686-1705 | MS.gene073966:intron | 35.0% |
| ! | GTCCAAAGCATTACAAAACA+TGG | + | 14710:1607-1626 | MS.gene073966:intron | 35.0% |
| ! | TCAATGGTTTAGGTACTGTA+TGG | + | 14710:2267-2286 | MS.gene073966:intron | 35.0% |
| ! | TCATGGGGTATTTGATAAAG+AGG | + | 14710:1685-1704 | MS.gene073966:intron | 35.0% |
| !! | TACTGTATGGTACTTTTTGC+TGG | + | 14710:2280-2299 | MS.gene073966:CDS | 35.0% |
| !!! | GTAGTACGTTGATGGTATTT+TGG | - | 14710:1880-1899 | MS.gene073966:intergenic | 35.0% |
| ACATAGGTAGTTGGTCAAGA+AGG | - | 14710:2113-2132 | MS.gene073966:intergenic | 40.0% | |
| ACCAACTACCTATGTTCCAA+TGG | + | 14710:2118-2137 | MS.gene073966:intron | 40.0% | |
| AGTAGCTAGGCATATAATGG+GGG | + | 14710:1293-1312 | MS.gene073966:intron | 40.0% | |
| AGTTACAGGGTTTCAGATAG+AGG | + | 14710:1106-1125 | MS.gene073966:intron | 40.0% | |
| ATGCTTGGAAAGCAACACAA+TGG | + | 14710:1550-1569 | MS.gene073966:intron | 40.0% | |
| CAAAAGCTGAACCATCTAGT+CGG | - | 14710:825-844 | MS.gene073966:intergenic | 40.0% | |
| CACTTAGCAAAGAAGTAGCT+AGG | + | 14710:1280-1299 | MS.gene073966:intron | 40.0% | |
| CCCATTTGCATTGCAACTAT+TGG | - | 14710:293-312 | MS.gene073966:intergenic | 40.0% | |
| CTTATTTATGGTGAGGCAGA+GGG | + | 14710:2319-2338 | MS.gene073966:CDS | 40.0% | |
| GAGAGCAAAAACTTGATGCT+TGG | + | 14710:1535-1554 | MS.gene073966:intron | 40.0% | |
| GATTGAATGCTGCATCAGTT+AGG | + | 14710:918-937 | MS.gene073966:intron | 40.0% | |
| GTCTAATCAAGCAAGATGGT+CGG | + | 14710:2515-2534 | MS.gene073966:CDS | 40.0% | |
| TAACATCGCCATTGGAACAT+AGG | - | 14710:2129-2148 | MS.gene073966:intergenic | 40.0% | |
| ! | AGCACTAGTTAAAGAGGTAC+AGG | + | 14710:892-911 | MS.gene073966:intron | 40.0% |
| ! | CATCAAGTTTTTGCTCTCGT+AGG | - | 14710:1533-1552 | MS.gene073966:intergenic | 40.0% |
| ! | GTTTGTTAAGGGAAGAGCAT+TGG | + | 14710:1468-1487 | MS.gene073966:intron | 40.0% |
| ! | TAGATGGTTCAGCTTTTGAC+AGG | + | 14710:827-846 | MS.gene073966:CDS | 40.0% |
| ! | TCTTATTTATGGTGAGGCAG+AGG | + | 14710:2318-2337 | MS.gene073966:CDS | 40.0% |
| ! | TGAGGCTCTTATTTATGGTG+AGG | + | 14710:2312-2331 | MS.gene073966:CDS | 40.0% |
| !! | GATGAGAAAGTTGGTTCGAA+AGG | + | 14710:1256-1275 | MS.gene073966:intron | 40.0% |
| !! | GCTGTTAAAGCATTGGAAAG+TGG | + | 14710:2588-2607 | MS.gene073966:CDS | 40.0% |
| !! | GTTAAAGCATTGGAAAGTGG+TGG | + | 14710:2591-2610 | MS.gene073966:CDS | 40.0% |
| AAAAAAGGGCAAGCGTGAAG+GGG | - | 14710:2192-2211 | MS.gene073965:intergenic | 45.0% | |
| AAGACCTCTGCTACAGACAA+TGG | - | 14710:2397-2416 | MS.gene073966:intergenic | 45.0% | |
| AATGCTGAGTGGTGAGAGAA+GGG | + | 14710:1426-1445 | MS.gene073966:intron | 45.0% | |
| ACGGGGAAATGAGTTGTGTA+AGG | + | 14710:1387-1406 | MS.gene073966:intron | 45.0% | |
| CCAATGCTTTAACAGCAGCT+CGG | - | 14710:2584-2603 | MS.gene073966:intergenic | 45.0% | |
| CGGGGAAATGAGTTGTGTAA+GGG | + | 14710:1388-1407 | MS.gene073966:intron | 45.0% | |
| CTAGAATCACCCCTCGAATT+GGG | - | 14710:268-287 | MS.gene073966:intergenic | 45.0% | |
| GAAAAAAGGGCAAGCGTGAA+GGG | - | 14710:2193-2212 | MS.gene073966:intergenic | 45.0% | |
| GCAATGCAAATGGGTATCCA+AGG | + | 14710:299-318 | MS.gene073966:CDS | 45.0% | |
| GCCATTGGAACATAGGTAGT+TGG | - | 14710:2122-2141 | MS.gene073966:intergenic | 45.0% | |
| TAAACCAGAGCAACCAGTTG+TGG | - | 14710:2421-2440 | MS.gene073966:intergenic | 45.0% | |
| TGAAAAAAGGGCAAGCGTGA+AGG | - | 14710:2194-2213 | MS.gene073966:intergenic | 45.0% | |
| TGAGAGTGAGAGGAGAGAAA+CGG | + | 14710:1368-1387 | MS.gene073966:intron | 45.0% | |
| TTGGCGAATAGATGCCATGA+AGG | + | 14710:1487-1506 | MS.gene073966:intron | 45.0% | |
| TTTGCTCTCGTAGGCATGTA+AGG | - | 14710:1524-1543 | MS.gene073966:intergenic | 45.0% | |
| ! | GCAGCTGAGGCTCTTATTTA+TGG | + | 14710:2307-2326 | MS.gene073966:CDS | 45.0% |
| ! | GTAGCTAGGCATATAATGGG+GGG | + | 14710:1294-1313 | MS.gene073966:intron | 45.0% |
| ! | TCTAGAATCACCCCTCGAAT+TGG | - | 14710:269-288 | MS.gene073966:intergenic | 45.0% |
| ! | TTAGGCAGGGACTCAGTTTT+GGG | + | 14710:768-787 | MS.gene073966:intron | 45.0% |
| ! | TTTAGGCAGGGACTCAGTTT+TGG | + | 14710:767-786 | MS.gene073966:intron | 45.0% |
| AAAAAGGGCAAGCGTGAAGG+GGG | - | 14710:2191-2210 | MS.gene073965:intergenic | 50.0% | |
| ACCTCTGCTACAGACAATGG+AGG | - | 14710:2394-2413 | MS.gene073966:intergenic | 50.0% | |
| AGAGTGAGAGGAGAGAAACG+GGG | + | 14710:1370-1389 | MS.gene073966:intron | 50.0% | |
| AGCAGAGGTCTTTCCACAAC+TGG | + | 14710:2405-2424 | MS.gene073966:intron | 50.0% | |
| ATGGCCTGGGATGAGAAAGT+TGG | + | 14710:1247-1266 | MS.gene073966:intron | 50.0% | |
| ATTTATGGTGAGGCAGAGGG+TGG | + | 14710:2322-2341 | MS.gene073966:CDS | 50.0% | |
| CCGAGCTGCTGTTAAAGCAT+TGG | + | 14710:2581-2600 | MS.gene073966:CDS | 50.0% | |
| CGAACCAACTTTCTCATCCC+AGG | - | 14710:1254-1273 | MS.gene073966:intergenic | 50.0% | |
| CTTTCCACAACTGGTTGCTC+TGG | + | 14710:2414-2433 | MS.gene073966:intron | 50.0% | |
| GAATGCTGAGTGGTGAGAGA+AGG | + | 14710:1425-1444 | MS.gene073966:intron | 50.0% | |
| GAATGCTGCATCAGTTAGGG+TGG | + | 14710:922-941 | MS.gene073966:intron | 50.0% | |
| GAGAGTGAGAGGAGAGAAAC+GGG | + | 14710:1369-1388 | MS.gene073966:intron | 50.0% | |
| GCAAATGGGTATCCAAGGAC+AGG | + | 14710:304-323 | MS.gene073966:CDS | 50.0% | |
| GCAGTCTGAGTGCGGTAATT+AGG | + | 14710:2613-2632 | MS.gene073966:CDS | 50.0% | |
| GCGAATAGATGCCATGAAGG+TGG | + | 14710:1490-1509 | MS.gene073966:intron | 50.0% | |
| GTCTGAGTGCGGTAATTAGG+AGG | + | 14710:2616-2635 | MS.gene073966:CDS | 50.0% | |
| TGCGGTAATTAGGAGGATCG+AGG | + | 14710:2623-2642 | MS.gene073966:CDS | 50.0% | |
| ! | CATAGTGATGGGACATGCCT+TGG | + | 14710:1633-1652 | MS.gene073966:intron | 50.0% |
| ! | TTTTGCTGGCATTGCAGCTG+AGG | + | 14710:2294-2313 | MS.gene073966:CDS | 50.0% |
| AAAAGGGCAAGCGTGAAGGG+GGG | - | 14710:2190-2209 | MS.gene073966:intergenic | 55.0% | |
| AAGTGGTGGCAGTCTGAGTG+CGG | + | 14710:2605-2624 | MS.gene073966:CDS | 55.0% | |
| AGGTCCACACACCACCTTCA+TGG | - | 14710:1504-1523 | MS.gene073966:intergenic | 55.0% | |
| ATGGGACATGCCTTGGAGGA+TGG | + | 14710:1640-1659 | MS.gene073966:intron | 55.0% | |
| CATCTAGTCGGCCTTCAGCA+AGG | - | 14710:813-832 | MS.gene073966:intergenic | 55.0% | |
| CTTGCTGAAGGCCGACTAGA+TGG | + | 14710:811-830 | MS.gene073966:CDS | 55.0% | |
| GATGCCATGAAGGTGGTGTG+TGG | + | 14710:1497-1516 | MS.gene073966:intron | 55.0% | |
| GCCTCCATTGTCTGTAGCAG+AGG | + | 14710:2390-2409 | MS.gene073966:CDS | 55.0% | |
| TCCACATGGCTGAGAGTGAG+AGG | + | 14710:1358-1377 | MS.gene073966:intron | 55.0% | |
| TCCTCTCACTCTCAGCCATG+TGG | - | 14710:1362-1381 | MS.gene073966:intergenic | 55.0% | |
| TGGGACATGCCTTGGAGGAT+GGG | + | 14710:1641-1660 | MS.gene073966:intron | 55.0% | |
| ! | AGTGATGGGACATGCCTTGG+AGG | + | 14710:1636-1655 | MS.gene073966:intron | 55.0% |
| ATGCCTTGGAGGATGGGCAC+TGG | + | 14710:1647-1666 | MS.gene073966:intron | 60.0% | |
| GTACCAGTGCCCATCCTCCA+AGG | - | 14710:1653-1672 | MS.gene073966:intergenic | 60.0% | |
| GTTGCCAGCGACCTTGCTGA+AGG | + | 14710:799-818 | MS.gene073966:CDS | 60.0% | |
| TCGGCCTTCAGCAAGGTCGC+TGG | - | 14710:806-825 | MS.gene073966:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| 14710 | gene | 257 | 2668 | 257 | ID=MS.gene073966 |
| 14710 | mRNA | 257 | 2668 | 257 | ID=MS.gene073966.t1;Parent=MS.gene073966 |
| 14710 | exon | 257 | 325 | 257 | ID=MS.gene073966.t1.exon1;Parent=MS.gene073966.t1 |
| 14710 | CDS | 257 | 325 | 257 | ID=cds.MS.gene073966.t1;Parent=MS.gene073966.t1 |
| 14710 | exon | 772 | 848 | 772 | ID=MS.gene073966.t1.exon2;Parent=MS.gene073966.t1 |
| 14710 | CDS | 772 | 848 | 772 | ID=cds.MS.gene073966.t1;Parent=MS.gene073966.t1 |
| 14710 | exon | 2279 | 2411 | 2279 | ID=MS.gene073966.t1.exon3;Parent=MS.gene073966.t1 |
| 14710 | CDS | 2279 | 2411 | 2279 | ID=cds.MS.gene073966.t1;Parent=MS.gene073966.t1 |
| 14710 | exon | 2513 | 2668 | 2513 | ID=MS.gene073966.t1.exon4;Parent=MS.gene073966.t1 |
| 14710 | CDS | 2513 | 2668 | 2513 | ID=cds.MS.gene073966.t1;Parent=MS.gene073966.t1 |
| Gene Sequence |
| Protein sequence |
