AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene08988


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene08988.t1 MTR_8g083310 91.088 1167 96 3 1 1161 1 1165 0.0 2103
MS.gene08988.t1 MTR_8g081060 55.714 70 11 1 365 434 227 276 6.14e-13 71.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene08988.t1 AT3G23740 33.819 343 180 9 846 1162 240 561 1.42e-37 150

Find 251 sgRNAs with CRISPR-Local

Find 396 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCAGCTGAAATTTCTGAATT+AGG 0.116328 4.4:+15022068 MS.gene08988:CDS
TCTTGGAAAGATGGCAATTT+TGG 0.194696 4.4:-15024160 None:intergenic
AGTGCTTTCTTGAGTGTTTC+TGG 0.194856 4.4:-15023349 None:intergenic
TTATTTCTCTCATGGGCTTT+GGG 0.201039 4.4:-15023387 None:intergenic
GATCGGGAAGTAGCTGAATT+AGG 0.204752 4.4:+15021999 MS.gene08988:CDS
TTGGGAAGATTCTTAAAATA+TGG 0.218302 4.4:-15023788 None:intergenic
CAACTATCAGTCTTAGTTTC+AGG 0.229353 4.4:-15022940 None:intergenic
CGACAACATCCAGGTGTTTC+AGG 0.234770 4.4:-15025591 None:intergenic
ATCCAAAAGCTTCTGAAGTT+TGG 0.240513 4.4:-15025229 None:intergenic
CTTCTGAATGGCCTAGTTAA+TGG 0.242037 4.4:+15024727 MS.gene08988:CDS
CAGCTGAAATTTCTGAATTA+GGG 0.242152 4.4:+15022069 MS.gene08988:CDS
GTTACATCGTTTCCACAAAA+AGG 0.243243 4.4:-15021774 None:intergenic
CCCCAAACTTCAGAAGCTTT+TGG 0.244143 4.4:+15025227 MS.gene08988:CDS
TCTTCAGCATCTAACATATT+AGG 0.253871 4.4:-15024541 None:intergenic
ATCAGCTTCCCGTGCAAATA+TGG 0.256177 4.4:-15023728 None:intergenic
TGTCAACGACACTCCTCTTT+TGG 0.257812 4.4:+15025869 MS.gene08988:CDS
TGCAAGTTTGAATCTGAAAT+TGG 0.260828 4.4:-15025267 None:intergenic
ATTATTTCTCTCATGGGCTT+TGG 0.273531 4.4:-15023388 None:intergenic
GCTCCGTCGGTTCTGGAAAA+TGG 0.277936 4.4:+15022029 MS.gene08988:CDS
AAATCTCTATGAACAGAAAT+TGG 0.285206 4.4:-15025480 None:intergenic
GATTTACCAGTCACACCTTT+AGG 0.298769 4.4:+15025498 MS.gene08988:CDS
TCCAAAAGCTTCTGAAGTTT+GGG 0.301497 4.4:-15025228 None:intergenic
TGATTTAGACTCTGAGCTTC+AGG 0.305858 4.4:-15024511 None:intergenic
CGTTCCGTTTGCGGGAATTT+CGG 0.308084 4.4:-15021569 None:intergenic
GTGGTTACCATAGTCATCTT+TGG 0.316172 4.4:-15023807 None:intergenic
CAAGCTGTCAGATGAAGATT+TGG 0.331421 4.4:+15022199 MS.gene08988:CDS
TTATCTTGTAGTTGAGATCT+TGG 0.337870 4.4:-15025408 None:intergenic
AGATCGGACGTTCCGTTTGC+GGG 0.338738 4.4:-15021577 None:intergenic
TTGATCTGTGACTTTCATTT+CGG 0.339926 4.4:-15025622 None:intergenic
CAAAGCCCTCTGCATCCTCT+TGG 0.342184 4.4:-15025693 None:intergenic
GTCAAATTGTATTGGCAATT+CGG 0.344690 4.4:-15024188 None:intergenic
CAATCATTTGAATCACTTCC+AGG 0.354354 4.4:-15025297 None:intergenic
GAAATTTCTGAATTAGGGTT+TGG 0.356119 4.4:+15022074 MS.gene08988:CDS
GGTGATAGTACAGGAAATTC+TGG 0.363890 4.4:+15025330 MS.gene08988:CDS
AAAAGGAAGCAATAACAAAA+AGG 0.364259 4.4:+15024765 MS.gene08988:CDS
CGAATTTATTCCCCACTTGC+CGG 0.365212 4.4:+15021963 MS.gene08988:CDS
TCTGAGGTATGCTCTGCATT+TGG 0.369214 4.4:-15023305 None:intergenic
TCATGACAATGACCCAATTT+CGG 0.374046 4.4:-15022847 None:intergenic
TCATGAAGACAAGAAGGTTA+TGG 0.374927 4.4:+15022864 MS.gene08988:CDS
ATTCAATTACAAAAGGCTAA+TGG 0.376627 4.4:+15022564 MS.gene08988:CDS
CAAGAAGGTTATGGGAGGTC+AGG 0.382245 4.4:+15022873 MS.gene08988:CDS
ATCGGGAAGTAGCTGAATTA+GGG 0.382557 4.4:+15022000 MS.gene08988:CDS
TCTTGAAACGGAACTTGAAC+CGG 0.382730 4.4:-15021723 None:intergenic
TTCCGAATCTGAAAGTCCTT+TGG 0.386134 4.4:-15021796 None:intergenic
AAGAAAGCAGTTTGTGAGTC+TGG 0.393914 4.4:+15024459 MS.gene08988:CDS
TTCAGATCGTGTTGAGGAAA+AGG 0.395076 4.4:+15026811 MS.gene08988:CDS
ACTTGAACCGGAACTGAGTA+TGG 0.396740 4.4:-15021711 None:intergenic
CAAAGTTGACTTGAATACTT+TGG 0.397446 4.4:+15024087 MS.gene08988:CDS
TTCAGGTGATTTCTCCCTGT+TGG 0.398168 4.4:-15025574 None:intergenic
TATCTTGTAGTTGAGATCTT+GGG 0.399426 4.4:-15025407 None:intergenic
AGCTCAGAGTCTAAATCAAT+TGG 0.402575 4.4:+15024516 MS.gene08988:CDS
CAAAACACCAAGCTGCTCTA+AGG 0.402756 4.4:-15023217 None:intergenic
CATGAAGACAAGAAGGTTAT+GGG 0.402943 4.4:+15022865 MS.gene08988:CDS
GTACACCTGCCTTGTCCAAC+AGG 0.404686 4.4:+15025559 MS.gene08988:CDS
ATACTTCCTTCATAAGGTCT+TGG 0.405275 4.4:-15025806 None:intergenic
TGAGTGGATTATTTCTCTCA+TGG 0.406884 4.4:-15023395 None:intergenic
TTTATAGGAATACCGAAATT+GGG 0.406959 4.4:+15022835 MS.gene08988:intron
TACAGGTACATCTGGTGATC+AGG 0.410151 4.4:+15023946 MS.gene08988:intron
AAAGCCCTCTGCATCCTCTT+GGG 0.411441 4.4:-15025692 None:intergenic
CGAAGATGACGATCTTGTTA+AGG 0.411660 4.4:+15021869 MS.gene08988:CDS
TTAAGCAAGATTCTTTCAAC+AGG 0.411745 4.4:+15023151 MS.gene08988:CDS
AAAGGAGTTCTCGAGATAGT+AGG 0.415123 4.4:-15025451 None:intergenic
CAAAAGGCTAATGGATGCTA+TGG 0.417412 4.4:+15022573 MS.gene08988:CDS
CTCCTATAGTTGACTGAACC+AGG 0.418077 4.4:-15023758 None:intergenic
CCTACACAGATGACATCATT+AGG 0.419553 4.4:-15022248 None:intergenic
GAGTGAATCAAAGGTGGATC+TGG 0.420859 4.4:+15023074 MS.gene08988:CDS
TGTTTCAGATGCTTTCCTGC+AGG 0.422230 4.4:-15026622 None:intergenic
TGGTTACCATAGTCATCTTT+GGG 0.422943 4.4:-15023806 None:intergenic
ACTTGAAACGGAACTTGAAC+CGG 0.426123 4.4:-15021667 None:intergenic
TACTTCCTTCATAAGGTCTT+GGG 0.428201 4.4:-15025805 None:intergenic
GATGCTATGGGAGATAATTT+CGG 0.429372 4.4:+15022586 MS.gene08988:CDS
ACAATTTGACGCAAAAGAAA+TGG 0.430175 4.4:+15024201 MS.gene08988:CDS
AATCTTCCCAAAGATGACTA+TGG 0.436351 4.4:+15023800 MS.gene08988:CDS
CCACCATGTGTTGCAGTGTC+TGG 0.438116 4.4:-15024688 None:intergenic
TTTGCTGCGGGAACTTGAAA+CGG 0.438266 4.4:-15021679 None:intergenic
GTGTTTCTGGTCAGATCCAT+AGG 0.442538 4.4:-15023336 None:intergenic
TGTTAAGATCATCATTCATC+TGG 0.443214 4.4:-15026671 None:intergenic
ATTTCAGTATCACGAGTCAT+TGG 0.444093 4.4:-15023255 None:intergenic
TTCAAATGATTGTGATCCTA+TGG 0.444913 4.4:+15025308 MS.gene08988:CDS
TGATACCAATGGGCCAGAAC+TGG 0.447913 4.4:+15022972 MS.gene08988:CDS
ATGAGGCGGGTGGCGGAGAT+CGG 0.451393 4.4:-15021593 None:intergenic
TTCTCCCTGTTGGACAAGGC+AGG 0.452781 4.4:-15025564 None:intergenic
GAATCAACCATACTCAGTTC+CGG 0.453096 4.4:+15021704 MS.gene08988:CDS
CCGGCGCCGGCGATTCTGAT+CGG 0.453266 4.4:+15021982 MS.gene08988:CDS
AAGGTCTTGGGCAACCTCTT+CGG 0.453280 4.4:-15025793 None:intergenic
ATTGGTGAAGATGCCAGTTC+TGG 0.453428 4.4:-15022985 None:intergenic
AATGTGGATGAGGCGGGTGG+CGG 0.453864 4.4:-15021600 None:intergenic
GGTTCTCACCGGTGTAGTAT+TGG 0.455125 4.4:-15024824 None:intergenic
TATTCCCCACTTGCCGGCGC+CGG 0.457589 4.4:+15021969 MS.gene08988:CDS
CGGCGCCGGCGATTCTGATC+GGG 0.457703 4.4:+15021983 MS.gene08988:CDS
TCGCCTCGCACGGAGGTCCT+TGG 0.459092 4.4:-15021943 None:intergenic
TTGGCAATTCGGAGGAGTCT+TGG 0.461511 4.4:-15024177 None:intergenic
CTAACAACATGTTTCTGAGA+TGG 0.462834 4.4:-15025830 None:intergenic
GTGACAACTTGATCAGCTAT+AGG 0.464581 4.4:-15025522 None:intergenic
TTTGAGATGGCAAAGGAAGT+TGG 0.468342 4.4:-15024012 None:intergenic
CAAATGCTCTTTCTGCATGA+AGG 0.468866 4.4:-15025743 None:intergenic
GAGATCGGACGTTCCGTTTG+CGG 0.472640 4.4:-15021578 None:intergenic
CTTAACAAGATCGTCATCTT+CGG 0.472983 4.4:-15021868 None:intergenic
CAGGTTCATTCAATTACAAA+AGG 0.473778 4.4:+15022557 MS.gene08988:CDS
CCGATCAGAATCGCCGGCGC+CGG 0.477749 4.4:-15021982 None:intergenic
TTTCTGGGTGCTAGAGATGT+TGG 0.478007 4.4:+15023105 MS.gene08988:CDS
TTGAAATTGTTCAAAGCCCC+AGG 0.478616 4.4:+15022538 MS.gene08988:CDS
TAACAACATGTTTCTGAGAT+GGG 0.479696 4.4:-15025829 None:intergenic
ACCTCAGAATGTCAAACCTA+TGG 0.482063 4.4:+15023320 MS.gene08988:CDS
AAAGCTCACCGTACCCGCTC+CGG 0.482065 4.4:+15021633 MS.gene08988:CDS
TTCTCAGTATCTACTTGCAT+TGG 0.482411 4.4:-15023003 None:intergenic
TCAAACTTGCAAGTAACTCC+TGG 0.489368 4.4:+15025279 MS.gene08988:CDS
AATCTTATCACACACCATTA+CGG 0.491836 4.4:-15024326 None:intergenic
GATGGGATACTTCCTTCATA+AGG 0.492449 4.4:-15025812 None:intergenic
GAGTGGATTATTTCTCTCAT+GGG 0.495906 4.4:-15023394 None:intergenic
CTTACATGTTTGCTCTTGAG+TGG 0.497544 4.4:-15023411 None:intergenic
AAGCTGTCAGATGAAGATTT+GGG 0.498032 4.4:+15022200 MS.gene08988:CDS
CGGGTGAATGTGGATGAGGC+GGG 0.499168 4.4:-15021606 None:intergenic
AACCAAAGGACTTTCAGATT+CGG 0.499438 4.4:+15021794 MS.gene08988:CDS
AACAGGAACGGGAACGGAAG+AGG 0.499995 4.4:-15021751 None:intergenic
CGATCTGAAAACTTAACACT+TGG 0.500039 4.4:-15026797 None:intergenic
ACCTGACTTCCATCCAAAAG+AGG 0.501538 4.4:-15025882 None:intergenic
TCGGAGGAGTCTTGGAAAGA+TGG 0.504525 4.4:-15024169 None:intergenic
TGATCAGCTATAGGACCTAA+AGG 0.507484 4.4:-15025513 None:intergenic
CCATGAGATGACATATTAGC+AGG 0.510296 4.4:-15024130 None:intergenic
TTGACATCTGATAATCATGA+AGG 0.512397 4.4:+15022910 MS.gene08988:CDS
CGCTCCGGTCAGATCCGGTC+CGG 0.514035 4.4:+15021648 MS.gene08988:CDS
CAAATCTTCATCTGACAGCT+TGG 0.516191 4.4:-15022198 None:intergenic
GGTTCAAAGATGCCTTCAAA+AGG 0.517017 4.4:+15024748 MS.gene08988:CDS
TTCAGGTGAAAGAAGCCTGC+AGG 0.518152 4.4:+15026607 MS.gene08988:intron
ACTAGATTCTTCATTTGAGA+TGG 0.520142 4.4:-15024626 None:intergenic
TATTTCTCTCATGGGCTTTG+GGG 0.520188 4.4:-15023386 None:intergenic
AATCGCCGGCGCCGGCAAGT+GGG 0.521074 4.4:-15021974 None:intergenic
CCCCTGGTTCAGTCAACTAT+AGG 0.521818 4.4:+15023756 MS.gene08988:CDS
TCGCCATCAATTGCTGAAAA+CGG 0.522563 4.4:+15022098 MS.gene08988:CDS
GCACCATGGGTGATACCAAT+GGG 0.525467 4.4:+15022962 MS.gene08988:CDS
GAATCGCCGGCGCCGGCAAG+TGG 0.526594 4.4:-15021975 None:intergenic
CTTGGCGTTAGTTCCCGAAA+AGG 0.530408 4.4:+15025654 MS.gene08988:CDS
CCTCGCACGGAGGTCCTTGG+TGG 0.530427 4.4:-15021940 None:intergenic
GACTGATCCTTGTTCCGTAA+TGG 0.533682 4.4:+15024312 MS.gene08988:CDS
CATCATTCAAGCAATGAGAA+AGG 0.534669 4.4:+15024427 MS.gene08988:CDS
TCCATAGGTTTGACATTCTG+AGG 0.534755 4.4:-15023321 None:intergenic
GAAGAGGGTTCCTCTTGAAA+CGG 0.536043 4.4:-15021735 None:intergenic
CTGAAACACCTGGATGTTGT+CGG 0.536845 4.4:+15025592 MS.gene08988:CDS
TTCATAAACCATATTTGCAC+GGG 0.537606 4.4:+15023720 MS.gene08988:CDS
GTACCCGCTCCGGTCAGATC+CGG 0.538113 4.4:+15021643 MS.gene08988:CDS
GGGAATAAATTCGCCTCGCA+CGG 0.538413 4.4:-15021953 None:intergenic
TGGCCCATTGGTATCACCCA+TGG 0.538471 4.4:-15022965 None:intergenic
GGACCGGATCTGACCGGAGC+GGG 0.538597 4.4:-15021646 None:intergenic
CCTGCTAATATGTCATCTCA+TGG 0.541971 4.4:+15024130 MS.gene08988:CDS
GAAGCTTCTTCACTTTGAGA+TGG 0.542689 4.4:-15024025 None:intergenic
GGATCTGACCGGAGCGGGTA+CGG 0.543526 4.4:-15021641 None:intergenic
AGCTTTGCTGCGGGTGAATG+TGG 0.543562 4.4:-15021616 None:intergenic
ACAGATCAACTTGATGCCCT+TGG 0.544853 4.4:+15025636 MS.gene08988:CDS
TGTGATGATATTGTGCTCAA+TGG 0.546109 4.4:+15023279 MS.gene08988:CDS
TGATTTCTCCCTGTTGGACA+AGG 0.546492 4.4:-15025568 None:intergenic
TGATCCGAAATTCCCGCAAA+CGG 0.547137 4.4:+15021565 MS.gene08988:CDS
ACAGGAACGGGAACGGAAGA+GGG 0.547351 4.4:-15021750 None:intergenic
GCGGGTGAATGTGGATGAGG+CGG 0.548554 4.4:-15021607 None:intergenic
GATCCTATGGGTGATAGTAC+AGG 0.549573 4.4:+15025321 MS.gene08988:CDS
TGTGATAAGATTGTCACAAA+TGG 0.552424 4.4:+15024337 MS.gene08988:CDS
AAGGAGTTCTCGAGATAGTA+GGG 0.552552 4.4:-15025450 None:intergenic
TATTCAAGTCAACTTTGTCA+TGG 0.552776 4.4:-15024081 None:intergenic
AGTTGTCACTAGAGAAGAAG+TGG 0.553740 4.4:+15025536 MS.gene08988:CDS
GGCTGTGCCTTAGAGCAGCT+TGG 0.560567 4.4:+15023210 MS.gene08988:CDS
ATAGGACCTAAAGGTGTGAC+TGG 0.561769 4.4:-15025504 None:intergenic
GTAGATACTGAGAAAGTGAA+TGG 0.563342 4.4:+15023012 MS.gene08988:CDS
GGAATTTCGGATCACGTCCA+TGG 0.563873 4.4:-15021556 None:intergenic
GGTTCTAAATCGCTGCCCAC+GGG 0.564160 4.4:+15024992 MS.gene08988:intron
GCATCTTTGAACCATTAACT+AGG 0.564566 4.4:-15024738 None:intergenic
CCTAATGATGTCATCTGTGT+AGG 0.564732 4.4:+15022248 MS.gene08988:CDS
GTGTTTATCTGTGCCATCTG+TGG 0.564797 4.4:+15023038 MS.gene08988:CDS
TGCACCATGGGTGATACCAA+TGG 0.565398 4.4:+15022961 MS.gene08988:CDS
GACAAGCTCCGACAACATCC+AGG 0.565824 4.4:-15025600 None:intergenic
TTGATCCTCGCATCATCCAC+AGG 0.565826 4.4:-15022128 None:intergenic
AAAAGGAACAGGAACGGGAA+CGG 0.566531 4.4:-15021757 None:intergenic
AAGAAGGTTATGGGAGGTCA+GGG 0.566531 4.4:+15022874 MS.gene08988:CDS
ATGATGCTCAAATGAAAGGT+TGG 0.567253 4.4:-15024410 None:intergenic
TACTTCCCGATCAGAATCGC+CGG 0.567923 4.4:-15021988 None:intergenic
TTGAATGATGCTCAAATGAA+AGG 0.568241 4.4:-15024414 None:intergenic
GTTCATAAACCATATTTGCA+CGG 0.569319 4.4:+15023719 MS.gene08988:CDS
AGGTTCTAAATCGCTGCCCA+CGG 0.570248 4.4:+15024991 MS.gene08988:intron
CGATGTGAGGAATGTGGAAG+AGG 0.571374 4.4:+15022286 MS.gene08988:CDS
CTTATCTGCACCCTCTGTTG+AGG 0.573087 4.4:+15024234 MS.gene08988:CDS
GATAAGATTGTCACAAATGG+TGG 0.573529 4.4:+15024340 MS.gene08988:CDS
AGATGCCAGTTCTGGCCCAT+TGG 0.574730 4.4:-15022977 None:intergenic
GGAAAATGGCAGTGTGAGGA+CGG 0.575753 4.4:+15022043 MS.gene08988:CDS
AAGACTGATAGTTGCACCAT+GGG 0.576264 4.4:+15022949 MS.gene08988:CDS
ATCGCCGGCGCCGGCAAGTG+GGG 0.577299 4.4:-15021973 None:intergenic
AACAGAAATTGGTGAAACAA+AGG 0.578081 4.4:-15025469 None:intergenic
GTGAATGTGGATGAGGCGGG+TGG 0.579031 4.4:-15021603 None:intergenic
AAACGGAACTTGAACCGGAC+CGG 0.581149 4.4:-15021662 None:intergenic
GGTACGGTGAGCTTTGCTGC+GGG 0.582951 4.4:-15021625 None:intergenic
TCTTCACTTTGAGATGGCAA+AGG 0.583276 4.4:-15024019 None:intergenic
GGGGCTTTGAACAATTTCAA+AGG 0.583740 4.4:-15022535 None:intergenic
GTTGGTAATGCTTTCGACCA+CGG 0.584626 4.4:+15023123 MS.gene08988:CDS
TCACACACCATTACGGAACA+AGG 0.589266 4.4:-15024319 None:intergenic
AAAAGGCTAATGGATGCTAT+GGG 0.591299 4.4:+15022574 MS.gene08988:CDS
TTTGTAATTGAATGAACCTG+GGG 0.594391 4.4:-15022554 None:intergenic
TGTGGAAACGATGTAACCAA+AGG 0.595525 4.4:+15021780 MS.gene08988:CDS
TGAAACAGAACAACTTGCAA+AGG 0.595999 4.4:+15026638 MS.gene08988:CDS
GAATCTGAAATTGGCAGAAG+TGG 0.596355 4.4:-15025258 None:intergenic
GGTTCAAGTTCCGTTTCAAG+AGG 0.600363 4.4:+15021725 MS.gene08988:CDS
GCTGCGGGTGAATGTGGATG+AGG 0.602043 4.4:-15021610 None:intergenic
GGGAAGCTGATCAAAACCCC+TGG 0.602371 4.4:+15023740 MS.gene08988:CDS
TGAACCGGACCGGATCTGAC+CGG 0.603361 4.4:-15021652 None:intergenic
GAATAATCTTGACTGTGCTA+AGG 0.603599 4.4:+15023173 MS.gene08988:CDS
CCACCAAGGACCTCCGTGCG+AGG 0.606940 4.4:+15021940 MS.gene08988:CDS
TCAGAGTTAGCCTCAACAGA+GGG 0.608322 4.4:-15024244 None:intergenic
TCATTGTCATGAAGACAAGA+AGG 0.608420 4.4:+15022858 MS.gene08988:CDS
GACACTGCAACACATGGTGG+TGG 0.614063 4.4:+15024691 MS.gene08988:CDS
GAGAAATCACCTGAAACACC+TGG 0.614071 4.4:+15025582 MS.gene08988:CDS
AGGTCCTTGGTGGTAGCACA+AGG 0.615884 4.4:-15021930 None:intergenic
TTCTGGAAAATGGCAGTGTG+AGG 0.618228 4.4:+15022039 MS.gene08988:CDS
CTGGTTCAGTCAACTATAGG+AGG 0.621061 4.4:+15023759 MS.gene08988:CDS
GGGTACGGTGAGCTTTGCTG+CGG 0.621821 4.4:-15021626 None:intergenic
GGTTGCCCAAGACCTTATGA+AGG 0.622380 4.4:+15025800 MS.gene08988:CDS
TAAATGCTTGAGTGAATCAA+AGG 0.622735 4.4:+15023065 MS.gene08988:CDS
AGCAGACAAATGACTGTCAG+TGG 0.623587 4.4:+15024052 MS.gene08988:CDS
ATGCTTGAGTGAATCAAAGG+TGG 0.624188 4.4:+15023068 MS.gene08988:CDS
CCAAAAGCTTCTGAAGTTTG+GGG 0.630512 4.4:-15025227 None:intergenic
TCAGCTGCTAGATGCCGAAG+AGG 0.631980 4.4:+15025779 MS.gene08988:CDS
GTAGCTGAAAATTCAAGCGA+GGG 0.632081 4.4:+15022350 MS.gene08988:CDS
TAGAAGCTAGCTGCGATGTG+AGG 0.635076 4.4:+15022273 MS.gene08988:CDS
CTCAGAGTTAGCCTCAACAG+AGG 0.638818 4.4:-15024245 None:intergenic
CCTATAGTTGACTGAACCAG+GGG 0.639145 4.4:-15023756 None:intergenic
TTTAGACTCTGAGCTTCAGG+AGG 0.640447 4.4:-15024508 None:intergenic
TGTAGCTGAAAATTCAAGCG+AGG 0.644391 4.4:+15022349 MS.gene08988:CDS
AACAATTTCAAAGGTAAACG+CGG 0.645334 4.4:-15022526 None:intergenic
TTACCAGACACTGCAACACA+TGG 0.645552 4.4:+15024685 MS.gene08988:CDS
TCAAATGATTGTGATCCTAT+GGG 0.646538 4.4:+15025309 MS.gene08988:CDS
TTTCCTGTACTATCACCCAT+AGG 0.646734 4.4:-15025324 None:intergenic
TCATGATTATCAGATGTCAA+AGG 0.647040 4.4:-15022907 None:intergenic
TACACCTGCCTTGTCCAACA+GGG 0.649992 4.4:+15025560 MS.gene08988:CDS
AAATTGTATTGGCAATTCGG+AGG 0.653709 4.4:-15024185 None:intergenic
AAGCATTTATCATCCACAGA+TGG 0.656457 4.4:-15023051 None:intergenic
AAAACCCAAGAGGATGCAGA+GGG 0.661927 4.4:+15025688 MS.gene08988:CDS
AGAGGCGGATTTATATGCAA+AGG 0.665530 4.4:+15023985 MS.gene08988:CDS
TCCTATAGTTGACTGAACCA+GGG 0.668929 4.4:-15023757 None:intergenic
GCTAAGGCTGCTGATCACAA+TGG 0.673146 4.4:+15023189 MS.gene08988:CDS
TAAGACTGATAGTTGCACCA+TGG 0.677561 4.4:+15022948 MS.gene08988:CDS
ATACACCTGTGGATGATGCG+AGG 0.679193 4.4:+15022123 MS.gene08988:CDS
TTTGGAATCCAATACTACAC+CGG 0.686242 4.4:+15024816 MS.gene08988:CDS
ATTCCCCTATCAAAATTCAG+AGG 0.686862 4.4:-15022173 None:intergenic
ATAAGATTGTCACAAATGGT+GGG 0.687693 4.4:+15024341 MS.gene08988:CDS
AATAAATTCGCCTCGCACGG+AGG 0.688523 4.4:-15021950 None:intergenic
GTTGCAGTGTCTGGTAACGC+AGG 0.694475 4.4:-15024679 None:intergenic
GTTGTCACTAGAGAAGAAGT+GGG 0.694605 4.4:+15025537 MS.gene08988:CDS
TCTACCTTGTGCTACCACCA+AGG 0.697929 4.4:+15021926 MS.gene08988:CDS
GAAGACAAGAAGGTTATGGG+AGG 0.705451 4.4:+15022868 MS.gene08988:CDS
CCAGACACTGCAACACATGG+TGG 0.710994 4.4:+15024688 MS.gene08988:CDS
TGAAAACGGCGATACACCTG+TGG 0.720243 4.4:+15022112 MS.gene08988:CDS
ACACAGATGACATCATTAGG+TGG 0.722388 4.4:-15022245 None:intergenic
TAGCTGCGATGTGAGGAATG+TGG 0.763594 4.4:+15022280 MS.gene08988:CDS
CGGACCGGATCTGACCGGAG+CGG 0.781159 4.4:-15021647 None:intergenic
AATCTTGCTTAACATCACCG+TGG 0.800564 4.4:-15023140 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATAAACAAATTGTTTATT+TGG - chr4.4:15026748-15026767 None:intergenic 10.0%
!!! ATAAGTTTAGTTTTAAAAAA+CGG - chr4.4:15025174-15025193 None:intergenic 10.0%
!!! TTATTTTTCATTTTTTTGAT+TGG + chr4.4:15025146-15025165 MS.gene08988:intron 10.0%
!!! TTTTTTATTTGAATATTTTC+AGG + chr4.4:15026590-15026609 MS.gene08988:intron 10.0%
!! ATTCAATCAATAAATAACAA+AGG - chr4.4:15022753-15022772 None:intergenic 15.0%
!! ATTTAAATAACCAAACTTAT+CGG - chr4.4:15026083-15026102 None:intergenic 15.0%
!! TGATGAAAATAAAAATTGAA+AGG - chr4.4:15022416-15022435 None:intergenic 15.0%
!!! TGATATAAATTTATTTTCTC+AGG + chr4.4:15026228-15026247 MS.gene08988:intron 15.0%
!! AAAAAAATGTCAAAGTTACT+TGG - chr4.4:15026375-15026394 None:intergenic 20.0%
!! AATTATATATCATGTAACCT+GGG + chr4.4:15023684-15023703 MS.gene08988:intron 20.0%
!! ATAAAATGATCAGAAAAGAA+AGG - chr4.4:15025954-15025973 None:intergenic 20.0%
!! GATATATACACAAAAGATTA+TGG - chr4.4:15024848-15024867 None:intergenic 20.0%
!! GCAAAATATTATAAACTTGT+CGG - chr4.4:15026282-15026301 None:intergenic 20.0%
!! TAAACAAATTGTTTATTTGG+AGG - chr4.4:15026745-15026764 None:intergenic 20.0%
!! TAATGTAGCATAAAAATAAG+AGG + chr4.4:15026543-15026562 MS.gene08988:intron 20.0%
!! TGAAATGAAATAATAGTGAA+AGG - chr4.4:15026124-15026143 None:intergenic 20.0%
!! TGCAAACAACTAAATAATAA+AGG - chr4.4:15022633-15022652 None:intergenic 20.0%
!! TTAATATTGTATTGCATAAG+TGG - chr4.4:15023844-15023863 None:intergenic 20.0%
!!! ACTAAACTTATACTACTTTT+AGG + chr4.4:15025183-15025202 MS.gene08988:intron 20.0%
!!! AGTATTGGTTTTTATTCTAT+TGG + chr4.4:15025099-15025118 MS.gene08988:intron 20.0%
!!! ATGAAATTTTGTTAGTTGAT+TGG + chr4.4:15022481-15022500 MS.gene08988:intron 20.0%
!!! ATTAAGCAAATTTTGTTCTT+TGG - chr4.4:15024374-15024393 None:intergenic 20.0%
!!! TAACCATTTTTTAATCTGTT+TGG - chr4.4:15026845-15026864 None:intergenic 20.0%
!!! TTAAGCAAATTTTGTTCTTT+GGG - chr4.4:15024373-15024392 None:intergenic 20.0%
!!! TTAAGTTTTTAAAACATGCT+GGG + chr4.4:15025015-15025034 MS.gene08988:CDS 20.0%
!!! TTTTTCTCAAAATTCCTTTT+CGG - chr4.4:15025671-15025690 None:intergenic 20.0%
! AAAAGGAAGCAATAACAAAA+AGG + chr4.4:15024765-15024784 MS.gene08988:CDS 25.0%
! AAAGAAAAAAGTCTTCTGAA+TGG + chr4.4:15024715-15024734 MS.gene08988:CDS 25.0%
! AAATCTCTATGAACAGAAAT+TGG - chr4.4:15025483-15025502 None:intergenic 25.0%
! AACCAAATTGACATTGTATT+AGG - chr4.4:15023531-15023550 None:intergenic 25.0%
! AGTAGAAAAACAGTCAAATA+AGG - chr4.4:15026431-15026450 None:intergenic 25.0%
! ATAAAACCTCAAGTAAATTC+TGG + chr4.4:15026318-15026337 MS.gene08988:intron 25.0%
! ATTCAATTACAAAAGGCTAA+TGG + chr4.4:15022564-15022583 MS.gene08988:CDS 25.0%
! CAACCAAACAGATTAAAAAA+TGG + chr4.4:15026839-15026858 MS.gene08988:CDS 25.0%
! CAATTATATATCATGTAACC+TGG + chr4.4:15023683-15023702 MS.gene08988:intron 25.0%
! CTGAATTTATTAAGTTACAC+GGG - chr4.4:15026490-15026509 None:intergenic 25.0%
! GAATAAAAACCAATACTTAC+AGG - chr4.4:15025096-15025115 None:intergenic 25.0%
! GCTGAATTTATTAAGTTACA+CGG - chr4.4:15026491-15026510 None:intergenic 25.0%
! TACCTAATACAATGTCAATT+TGG + chr4.4:15023526-15023545 MS.gene08988:intron 25.0%
! TATAATCAATGAGAAAGAGA+GGG - chr4.4:15024902-15024921 None:intergenic 25.0%
! TGACAATATATGCATATACA+TGG + chr4.4:15023645-15023664 MS.gene08988:intron 25.0%
! TTATAATCAATGAGAAAGAG+AGG - chr4.4:15024903-15024922 None:intergenic 25.0%
! TTGACATTGTATTAGGTATT+AGG - chr4.4:15023524-15023543 None:intergenic 25.0%
! TTGGGAAGATTCTTAAAATA+TGG - chr4.4:15023791-15023810 None:intergenic 25.0%
! TTTATAGGAATACCGAAATT+GGG + chr4.4:15022835-15022854 MS.gene08988:intron 25.0%
!! AATTGGCATCGTAATTTTAT+AGG + chr4.4:15022820-15022839 MS.gene08988:intron 25.0%
!! TATTTGGAGGAACAAATTTT+GGG - chr4.4:15026732-15026751 None:intergenic 25.0%
!! TTATTTGGAGGAACAAATTT+TGG - chr4.4:15026733-15026752 None:intergenic 25.0%
!! TTCTCATTTTCCAACAAAAT+CGG - chr4.4:15025065-15025084 None:intergenic 25.0%
!! TTGATCAAGTAATTTTGAAC+AGG + chr4.4:15024971-15024990 MS.gene08988:intron 25.0%
!! TTTTATAGGAATACCGAAAT+TGG + chr4.4:15022834-15022853 MS.gene08988:intron 25.0%
!! TTTTCTCAAAATTCCTTTTC+GGG - chr4.4:15025670-15025689 None:intergenic 25.0%
!! TTTTGTAATTGAATGAACCT+GGG - chr4.4:15022558-15022577 None:intergenic 25.0%
!!! ATACATGGTTTTGTATTTGT+TGG + chr4.4:15023660-15023679 MS.gene08988:intron 25.0%
!!! CTTGAGGTTTTATTTCTAAA+TGG - chr4.4:15026311-15026330 None:intergenic 25.0%
!!! GTTAAGTTTTTAAAACATGC+TGG + chr4.4:15025014-15025033 MS.gene08988:CDS 25.0%
AACAATTTCAAAGGTAAACG+CGG - chr4.4:15022529-15022548 None:intergenic 30.0%
AACAGAAATTGGTGAAACAA+AGG - chr4.4:15025472-15025491 None:intergenic 30.0%
AATCTTATCACACACCATTA+CGG - chr4.4:15024329-15024348 None:intergenic 30.0%
ACAATTTGACGCAAAAGAAA+TGG + chr4.4:15024201-15024220 MS.gene08988:CDS 30.0%
ACTAGATTCTTCATTTGAGA+TGG - chr4.4:15024629-15024648 None:intergenic 30.0%
AGTCTAATTCCTGTAAGTAT+TGG + chr4.4:15025084-15025103 MS.gene08988:intron 30.0%
ATAAGATTGTCACAAATGGT+GGG + chr4.4:15024341-15024360 MS.gene08988:CDS 30.0%
ATAATCAATGAGAAAGAGAG+GGG - chr4.4:15024901-15024920 None:intergenic 30.0%
ATAGTCATATCAACATCATG+TGG - chr4.4:15025913-15025932 None:intergenic 30.0%
ATTATCTCATCCGATAAGTT+TGG + chr4.4:15026070-15026089 MS.gene08988:intron 30.0%
CAGCTGAAATTTCTGAATTA+GGG + chr4.4:15022069-15022088 MS.gene08988:CDS 30.0%
CAGGTTCATTCAATTACAAA+AGG + chr4.4:15022557-15022576 MS.gene08988:CDS 30.0%
CTTCACGATAATAACTGAAA+TGG + chr4.4:15025978-15025997 MS.gene08988:intron 30.0%
GAAATTTCTGAATTAGGGTT+TGG + chr4.4:15022074-15022093 MS.gene08988:CDS 30.0%
GTTCATAAACCATATTTGCA+CGG + chr4.4:15023719-15023738 MS.gene08988:CDS 30.0%
TAAATGCTTGAGTGAATCAA+AGG + chr4.4:15023065-15023084 MS.gene08988:CDS 30.0%
TAATAGTGAAAGGAATTGCA+AGG - chr4.4:15026114-15026133 None:intergenic 30.0%
TATCTTGTAGTTGAGATCTT+GGG - chr4.4:15025410-15025429 None:intergenic 30.0%
TATTCAAGTCAACTTTGTCA+TGG - chr4.4:15024084-15024103 None:intergenic 30.0%
TCAAATGATTGTGATCCTAT+GGG + chr4.4:15025309-15025328 MS.gene08988:CDS 30.0%
TCAGCTGAAATTTCTGAATT+AGG + chr4.4:15022068-15022087 MS.gene08988:CDS 30.0%
TCATGATTATCAGATGTCAA+AGG - chr4.4:15022910-15022929 None:intergenic 30.0%
TCTTCAGCATCTAACATATT+AGG - chr4.4:15024544-15024563 None:intergenic 30.0%
TGTGATAAGATTGTCACAAA+TGG + chr4.4:15024337-15024356 MS.gene08988:CDS 30.0%
TGTTAAGATCATCATTCATC+TGG - chr4.4:15026674-15026693 None:intergenic 30.0%
TGTTTAAACTTCCACTATAG+TGG + chr4.4:15023587-15023606 MS.gene08988:intron 30.0%
TTAAGCAAGATTCTTTCAAC+AGG + chr4.4:15023151-15023170 MS.gene08988:CDS 30.0%
TTATCTTGTAGTTGAGATCT+TGG - chr4.4:15025411-15025430 None:intergenic 30.0%
TTATTATGCAAAGCTTGTGA+TGG + chr4.4:15026033-15026052 MS.gene08988:intron 30.0%
TTCAAAGGAGTAAATCTGTA+AGG + chr4.4:15022390-15022409 MS.gene08988:intron 30.0%
TTCAAATGATTGTGATCCTA+TGG + chr4.4:15025308-15025327 MS.gene08988:CDS 30.0%
TTCATAAACCATATTTGCAC+GGG + chr4.4:15023720-15023739 MS.gene08988:CDS 30.0%
TTGAATGATGCTCAAATGAA+AGG - chr4.4:15024417-15024436 None:intergenic 30.0%
TTGACATCTGATAATCATGA+AGG + chr4.4:15022910-15022929 MS.gene08988:CDS 30.0%
TTGATCTGTGACTTTCATTT+CGG - chr4.4:15025625-15025644 None:intergenic 30.0%
TTTCATCATTGCATATGTGT+TGG + chr4.4:15022428-15022447 MS.gene08988:intron 30.0%
TTTGTAATTGAATGAACCTG+GGG - chr4.4:15022557-15022576 None:intergenic 30.0%
! AGAAAAATAGCTCTGTTCAA+AGG + chr4.4:15022375-15022394 MS.gene08988:CDS 30.0%
! CTTTTGTAATTGAATGAACC+TGG - chr4.4:15022559-15022578 None:intergenic 30.0%
! GATACTATTGTACGTGATTT+TGG + chr4.4:15022706-15022725 MS.gene08988:intron 30.0%
! GCATATAAAGACGTTGATAA+TGG - chr4.4:15026513-15026532 None:intergenic 30.0%
! GGTAAATCTTAAAAGTATGC+AGG - chr4.4:15024880-15024899 None:intergenic 30.0%
! GTCAAATTGTATTGGCAATT+CGG - chr4.4:15024191-15024210 None:intergenic 30.0%
! TCTTTTGCGTCAAATTGTAT+TGG - chr4.4:15024199-15024218 None:intergenic 30.0%
! TGCAAGTTTGAATCTGAAAT+TGG - chr4.4:15025270-15025289 None:intergenic 30.0%
!! AGGAACAAATTTTGGGAATA+AGG - chr4.4:15026725-15026744 None:intergenic 30.0%
!! ATTTGTTTTCTGCCAGTTAT+GGG + chr4.4:15023454-15023473 MS.gene08988:intron 30.0%
!! ATTTTGAGAAAAAACCCAAG+AGG + chr4.4:15025678-15025697 MS.gene08988:CDS 30.0%
!! CAAAGTTGACTTGAATACTT+TGG + chr4.4:15024087-15024106 MS.gene08988:CDS 30.0%
!! TAACAACATGTTTCTGAGAT+GGG - chr4.4:15025832-15025851 None:intergenic 30.0%
!! TATTTGTTTTCTGCCAGTTA+TGG + chr4.4:15023453-15023472 MS.gene08988:intron 30.0%
!! TTAAAAGTATGCAGGTCTTT+TGG - chr4.4:15024872-15024891 None:intergenic 30.0%
!! TTGTTATTGCTTCCTTTTGA+AGG - chr4.4:15024763-15024782 None:intergenic 30.0%
!!! ATTTAGTTTTACATGTGCGA+CGG + chr4.4:15022667-15022686 MS.gene08988:intron 30.0%
!!! GTTTTAAAAACTTAACCCGT+GGG - chr4.4:15025010-15025029 None:intergenic 30.0%
!!! TGTTTTAAAAACTTAACCCG+TGG - chr4.4:15025011-15025030 None:intergenic 30.0%
!!! TTTGAACAGAGCTATTTTTC+TGG - chr4.4:15022376-15022395 None:intergenic 30.0%
AACCAAAGGACTTTCAGATT+CGG + chr4.4:15021794-15021813 MS.gene08988:CDS 35.0%
AAGCATTTATCATCCACAGA+TGG - chr4.4:15023054-15023073 None:intergenic 35.0%
AAGCTGTCAGATGAAGATTT+GGG + chr4.4:15022200-15022219 MS.gene08988:CDS 35.0%
AATCTTCCCAAAGATGACTA+TGG + chr4.4:15023800-15023819 MS.gene08988:CDS 35.0%
ACTTGGAATTTCTCACCATA+GGG - chr4.4:15026358-15026377 None:intergenic 35.0%
AGCTCAGAGTCTAAATCAAT+TGG + chr4.4:15024516-15024535 MS.gene08988:CDS 35.0%
ATACTTCCTTCATAAGGTCT+TGG - chr4.4:15025809-15025828 None:intergenic 35.0%
ATATGTGCGATGGAACTAAT+TGG + chr4.4:15022803-15022822 MS.gene08988:intron 35.0%
ATGATGCTCAAATGAAAGGT+TGG - chr4.4:15024413-15024432 None:intergenic 35.0%
ATTCCCCTATCAAAATTCAG+AGG - chr4.4:15022176-15022195 None:intergenic 35.0%
ATTTCAGTATCACGAGTCAT+TGG - chr4.4:15023258-15023277 None:intergenic 35.0%
CAAAAGATTATGGTTCTCAC+CGG - chr4.4:15024838-15024857 None:intergenic 35.0%
CAAAATGTCTAACCCATAAC+TGG - chr4.4:15023469-15023488 None:intergenic 35.0%
CAACTATCAGTCTTAGTTTC+AGG - chr4.4:15022943-15022962 None:intergenic 35.0%
CAATCATTTGAATCACTTCC+AGG - chr4.4:15025300-15025319 None:intergenic 35.0%
CATCATTCAAGCAATGAGAA+AGG + chr4.4:15024427-15024446 MS.gene08988:CDS 35.0%
CATGAAGACAAGAAGGTTAT+GGG + chr4.4:15022865-15022884 MS.gene08988:CDS 35.0%
CCATCATAAAAATGAAGAGG+CGG + chr4.4:15023970-15023989 MS.gene08988:CDS 35.0%
CGATCTGAAAACTTAACACT+TGG - chr4.4:15026800-15026819 None:intergenic 35.0%
CTTAACAAGATCGTCATCTT+CGG - chr4.4:15021871-15021890 None:intergenic 35.0%
GAATAATCTTGACTGTGCTA+AGG + chr4.4:15023173-15023192 MS.gene08988:CDS 35.0%
GATAAGATTGTCACAAATGG+TGG + chr4.4:15024340-15024359 MS.gene08988:CDS 35.0%
GATGCTATGGGAGATAATTT+CGG + chr4.4:15022586-15022605 MS.gene08988:CDS 35.0%
GCATCTTTGAACCATTAACT+AGG - chr4.4:15024741-15024760 None:intergenic 35.0%
GTAGATACTGAGAAAGTGAA+TGG + chr4.4:15023012-15023031 MS.gene08988:CDS 35.0%
GTTACATCGTTTCCACAAAA+AGG - chr4.4:15021777-15021796 None:intergenic 35.0%
TACTTCCTTCATAAGGTCTT+GGG - chr4.4:15025808-15025827 None:intergenic 35.0%
TACTTGGAATTTCTCACCAT+AGG - chr4.4:15026359-15026378 None:intergenic 35.0%
TCATGAAGACAAGAAGGTTA+TGG + chr4.4:15022864-15022883 MS.gene08988:CDS 35.0%
TCATGACAATGACCCAATTT+CGG - chr4.4:15022850-15022869 None:intergenic 35.0%
TCATTGTCATGAAGACAAGA+AGG + chr4.4:15022858-15022877 MS.gene08988:CDS 35.0%
TGAAACAGAACAACTTGCAA+AGG + chr4.4:15026638-15026657 MS.gene08988:CDS 35.0%
TGGTGAGATGAAAAATGGTT+TGG + chr4.4:15024798-15024817 MS.gene08988:CDS 35.0%
TGGTTACCATAGTCATCTTT+GGG - chr4.4:15023809-15023828 None:intergenic 35.0%
TGTGATGATATTGTGCTCAA+TGG + chr4.4:15023279-15023298 MS.gene08988:CDS 35.0%
TTCTCAGTATCTACTTGCAT+TGG - chr4.4:15023006-15023025 None:intergenic 35.0%
TTGCAAAAATGACGATGTTG+TGG + chr4.4:15024588-15024607 MS.gene08988:CDS 35.0%
TTTGCTGGTGAGATGAAAAA+TGG + chr4.4:15024793-15024812 MS.gene08988:CDS 35.0%
! AAAAGGCTAATGGATGCTAT+GGG + chr4.4:15022574-15022593 MS.gene08988:CDS 35.0%
! AAATTGTATTGGCAATTCGG+AGG - chr4.4:15024188-15024207 None:intergenic 35.0%
! AAGATTGCTTCCGATTTTGT+TGG + chr4.4:15025052-15025071 MS.gene08988:CDS 35.0%
! AATTAGCTTGATATGTGCGA+TGG + chr4.4:15022793-15022812 MS.gene08988:intron 35.0%
! AGCAAATTTTGTTCTTTGGG+TGG - chr4.4:15024370-15024389 None:intergenic 35.0%
! ATTATTTCTCTCATGGGCTT+TGG - chr4.4:15023391-15023410 None:intergenic 35.0%
! CTAACAACATGTTTCTGAGA+TGG - chr4.4:15025833-15025852 None:intergenic 35.0%
! TAAGTTTTCAGATCGTGTTG+AGG + chr4.4:15026805-15026824 MS.gene08988:CDS 35.0%
! TCACGTTTTGCTTTCTTGAA+AGG - chr4.4:15021897-15021916 None:intergenic 35.0%
! TCTTGGAAAGATGGCAATTT+TGG - chr4.4:15024163-15024182 None:intergenic 35.0%
! TTATTTCTCTCATGGGCTTT+GGG - chr4.4:15023390-15023409 None:intergenic 35.0%
! TTGGTAGTTGTTCTATGTAG+AGG + chr4.4:15022725-15022744 MS.gene08988:intron 35.0%
! TTTGGAATCCAATACTACAC+CGG + chr4.4:15024816-15024835 MS.gene08988:CDS 35.0%
!! ATCCAAAAGCTTCTGAAGTT+TGG - chr4.4:15025232-15025251 None:intergenic 35.0%
!! ATGGTTGATTCTTTTTGCTG+CGG - chr4.4:15021695-15021714 None:intergenic 35.0%
!! CGCCTCTTCATTTTTATGAT+GGG - chr4.4:15023972-15023991 None:intergenic 35.0%
!! GAGTGGATTATTTCTCTCAT+GGG - chr4.4:15023397-15023416 None:intergenic 35.0%
!! TCCAAAAGCTTCTGAAGTTT+GGG - chr4.4:15025231-15025250 None:intergenic 35.0%
!! TGAGTGGATTATTTCTCTCA+TGG - chr4.4:15023398-15023417 None:intergenic 35.0%
!!! AAAGTGCTTGCTGATTTTAC+AGG + chr4.4:15023929-15023948 MS.gene08988:intron 35.0%
!!! AACAAAAAGGCTAGTTTTGC+TGG + chr4.4:15024778-15024797 MS.gene08988:CDS 35.0%
!!! CGTCATTTTTGCAAATTGCA+TGG - chr4.4:15024582-15024601 None:intergenic 35.0%
AAAGGAGTTCTCGAGATAGT+AGG - chr4.4:15025454-15025473 None:intergenic 40.0%
AAGAAAGCAGTTTGTGAGTC+TGG + chr4.4:15024459-15024478 MS.gene08988:CDS 40.0%
AAGACTGATAGTTGCACCAT+GGG + chr4.4:15022949-15022968 MS.gene08988:CDS 40.0%
AAGGAGTTCTCGAGATAGTA+GGG - chr4.4:15025453-15025472 None:intergenic 40.0%
AATCTTGCTTAACATCACCG+TGG - chr4.4:15023143-15023162 None:intergenic 40.0%
AATTTGGTTAAACCCTCAGC+TGG + chr4.4:15023542-15023561 MS.gene08988:intron 40.0%
ACACAGATGACATCATTAGG+TGG - chr4.4:15022248-15022267 None:intergenic 40.0%
ACCTCAGAATGTCAAACCTA+TGG + chr4.4:15023320-15023339 MS.gene08988:CDS 40.0%
ACTTGAAACGGAACTTGAAC+CGG - chr4.4:15021670-15021689 None:intergenic 40.0%
AGTGCTTTCTTGAGTGTTTC+TGG - chr4.4:15023352-15023371 None:intergenic 40.0%
AGTTGTCACTAGAGAAGAAG+TGG + chr4.4:15025536-15025555 MS.gene08988:CDS 40.0%
ATAAGTGGTTGAAAACGTGG+TGG - chr4.4:15023829-15023848 None:intergenic 40.0%
ATAGGGCCAGAATTTACTTG+AGG - chr4.4:15026327-15026346 None:intergenic 40.0%
ATCGGGAAGTAGCTGAATTA+GGG + chr4.4:15022000-15022019 MS.gene08988:CDS 40.0%
ATGCTTGAGTGAATCAAAGG+TGG + chr4.4:15023068-15023087 MS.gene08988:CDS 40.0%
ATTTGGTTAAACCCTCAGCT+GGG + chr4.4:15023543-15023562 MS.gene08988:intron 40.0%
CAAATCTTCATCTGACAGCT+TGG - chr4.4:15022201-15022220 None:intergenic 40.0%
CAAATGCTCTTTCTGCATGA+AGG - chr4.4:15025746-15025765 None:intergenic 40.0%
CAAGCTGTCAGATGAAGATT+TGG + chr4.4:15022199-15022218 MS.gene08988:CDS 40.0%
CCATGAGATGACATATTAGC+AGG - chr4.4:15024133-15024152 None:intergenic 40.0%
CCTAAAAAAAACCCAGCTGA+GGG - chr4.4:15023557-15023576 None:intergenic 40.0%
CCTAATGATGTCATCTGTGT+AGG + chr4.4:15022248-15022267 MS.gene08988:CDS 40.0%
CCTACACAGATGACATCATT+AGG - chr4.4:15022251-15022270 None:intergenic 40.0%
CCTGCTAATATGTCATCTCA+TGG + chr4.4:15024130-15024149 MS.gene08988:CDS 40.0%
CGAAGATGACGATCTTGTTA+AGG + chr4.4:15021869-15021888 MS.gene08988:CDS 40.0%
CTTACATGTTTGCTCTTGAG+TGG - chr4.4:15023414-15023433 None:intergenic 40.0%
CTTCTGAATGGCCTAGTTAA+TGG + chr4.4:15024727-15024746 MS.gene08988:CDS 40.0%
CTTGGAATTTCTCACCATAG+GGG - chr4.4:15026357-15026376 None:intergenic 40.0%
GAATCAACCATACTCAGTTC+CGG + chr4.4:15021704-15021723 MS.gene08988:CDS 40.0%
GACAACGAAGCTATCTCATA+AGG - chr4.4:15026409-15026428 None:intergenic 40.0%
GATGGGATACTTCCTTCATA+AGG - chr4.4:15025815-15025834 None:intergenic 40.0%
GATTTACCAGTCACACCTTT+AGG + chr4.4:15025498-15025517 MS.gene08988:CDS 40.0%
GGAATAAGGTATGCACATAC+AGG - chr4.4:15026711-15026730 None:intergenic 40.0%
GGCCCATCATAAAAATGAAG+AGG + chr4.4:15023967-15023986 MS.gene08988:CDS 40.0%
GGTGATAGTACAGGAAATTC+TGG + chr4.4:15025330-15025349 MS.gene08988:CDS 40.0%
GGTTCAAAGATGCCTTCAAA+AGG + chr4.4:15024748-15024767 MS.gene08988:CDS 40.0%
GTAGCTGAAAATTCAAGCGA+GGG + chr4.4:15022350-15022369 MS.gene08988:CDS 40.0%
GTGACAACTTGATCAGCTAT+AGG - chr4.4:15025525-15025544 None:intergenic 40.0%
GTGGTTACCATAGTCATCTT+TGG - chr4.4:15023810-15023829 None:intergenic 40.0%
GTTGATTGGATTCTTGATGC+AGG + chr4.4:15022495-15022514 MS.gene08988:intron 40.0%
GTTGTCACTAGAGAAGAAGT+GGG + chr4.4:15025537-15025556 MS.gene08988:CDS 40.0%
TAAACTTCCACTATAGTGGC+TGG + chr4.4:15023591-15023610 MS.gene08988:intron 40.0%
TAAGACTGATAGTTGCACCA+TGG + chr4.4:15022948-15022967 MS.gene08988:CDS 40.0%
TATTTCTCTCATGGGCTTTG+GGG - chr4.4:15023389-15023408 None:intergenic 40.0%
TCAAACTTGCAAGTAACTCC+TGG + chr4.4:15025279-15025298 MS.gene08988:CDS 40.0%
TCCACAAAAAGGAACAGGAA+CGG - chr4.4:15021766-15021785 None:intergenic 40.0%
TCCATAGGTTTGACATTCTG+AGG - chr4.4:15023324-15023343 None:intergenic 40.0%
TCCTATAGTTGACTGAACCA+GGG - chr4.4:15023760-15023779 None:intergenic 40.0%
TCGCCATCAATTGCTGAAAA+CGG + chr4.4:15022098-15022117 MS.gene08988:CDS 40.0%
TCGTTTCCACAAAAAGGAAC+AGG - chr4.4:15021771-15021790 None:intergenic 40.0%
TCTTGAAACGGAACTTGAAC+CGG - chr4.4:15021726-15021745 None:intergenic 40.0%
TGATCAGCTATAGGACCTAA+AGG - chr4.4:15025516-15025535 None:intergenic 40.0%
TGATTTAGACTCTGAGCTTC+AGG - chr4.4:15024514-15024533 None:intergenic 40.0%
TGCATAAGTGGTTGAAAACG+TGG - chr4.4:15023832-15023851 None:intergenic 40.0%
TGTAGCTGAAAATTCAAGCG+AGG + chr4.4:15022349-15022368 MS.gene08988:CDS 40.0%
TGTGGAAACGATGTAACCAA+AGG + chr4.4:15021780-15021799 MS.gene08988:CDS 40.0%
TTCAGATCGTGTTGAGGAAA+AGG + chr4.4:15026811-15026830 MS.gene08988:CDS 40.0%
TTCCGAATCTGAAAGTCCTT+TGG - chr4.4:15021799-15021818 None:intergenic 40.0%
TTGAAATTGTTCAAAGCCCC+AGG + chr4.4:15022538-15022557 MS.gene08988:CDS 40.0%
TTGGAATTTCTCACCATAGG+GGG - chr4.4:15026356-15026375 None:intergenic 40.0%
TTTCCTGTACTATCACCCAT+AGG - chr4.4:15025327-15025346 None:intergenic 40.0%
! AGAGGCGGATTTATATGCAA+AGG + chr4.4:15023985-15024004 MS.gene08988:CDS 40.0%
! CAAAAGGCTAATGGATGCTA+TGG + chr4.4:15022573-15022592 MS.gene08988:CDS 40.0%
! GAAGCTTCTTCACTTTGAGA+TGG - chr4.4:15024028-15024047 None:intergenic 40.0%
! GAATCTGAAATTGGCAGAAG+TGG - chr4.4:15025261-15025280 None:intergenic 40.0%
! TTTGAGATGGCAAAGGAAGT+TGG - chr4.4:15024015-15024034 None:intergenic 40.0%
! TTTTCAGCTACATTAGCAGC+AGG - chr4.4:15022341-15022360 None:intergenic 40.0%
!! ACGAGCCTCTGAATTTTGAT+AGG + chr4.4:15022168-15022187 MS.gene08988:CDS 40.0%
!! ATTAGGGTTTTATGCTCCGT+CGG + chr4.4:15022016-15022035 MS.gene08988:CDS 40.0%
!! CCAAAAGCTTCTGAAGTTTG+GGG - chr4.4:15025230-15025249 None:intergenic 40.0%
!! CCGCCTCTTCATTTTTATGA+TGG - chr4.4:15023973-15023992 None:intergenic 40.0%
!! CGAGCCTCTGAATTTTGATA+GGG + chr4.4:15022169-15022188 MS.gene08988:CDS 40.0%
!! GAGCCTCTGAATTTTGATAG+GGG + chr4.4:15022170-15022189 MS.gene08988:CDS 40.0%
!! GCTGATTTTACAGGTACATC+TGG + chr4.4:15023938-15023957 MS.gene08988:intron 40.0%
!! GGGGCTTTGAACAATTTCAA+AGG - chr4.4:15022538-15022557 None:intergenic 40.0%
!! TCTTCACTTTGAGATGGCAA+AGG - chr4.4:15024022-15024041 None:intergenic 40.0%
!! TGGTTGATTCTTTTTGCTGC+GGG - chr4.4:15021694-15021713 None:intergenic 40.0%
!!! CCTCAGCTGGGTTTTTTTTA+GGG + chr4.4:15023555-15023574 MS.gene08988:intron 40.0%
AAAAACCCAAGAGGATGCAG+AGG + chr4.4:15025687-15025706 MS.gene08988:CDS 45.0%
AAAACCCAAGAGGATGCAGA+GGG + chr4.4:15025688-15025707 MS.gene08988:CDS 45.0%
AAAAGGAACAGGAACGGGAA+CGG - chr4.4:15021760-15021779 None:intergenic 45.0%
AAGAAGGTTATGGGAGGTCA+GGG + chr4.4:15022874-15022893 MS.gene08988:CDS 45.0%
AAGTTCACCAGCCACTATAG+TGG - chr4.4:15023601-15023620 None:intergenic 45.0%
ACAGATCAACTTGATGCCCT+TGG + chr4.4:15025636-15025655 MS.gene08988:CDS 45.0%
ACCTGACTTCCATCCAAAAG+AGG - chr4.4:15025885-15025904 None:intergenic 45.0%
ACTTGAACCGGAACTGAGTA+TGG - chr4.4:15021714-15021733 None:intergenic 45.0%
AGCAGACAAATGACTGTCAG+TGG + chr4.4:15024052-15024071 MS.gene08988:CDS 45.0%
ATCAGCTTCCCGTGCAAATA+TGG - chr4.4:15023731-15023750 None:intergenic 45.0%
ATTGGTGAAGATGCCAGTTC+TGG - chr4.4:15022988-15023007 None:intergenic 45.0%
CAAAACACCAAGCTGCTCTA+AGG - chr4.4:15023220-15023239 None:intergenic 45.0%
CCACAAAAAGGAACAGGAAC+GGG - chr4.4:15021765-15021784 None:intergenic 45.0%
CCCTAAAAAAAACCCAGCTG+AGG - chr4.4:15023558-15023577 None:intergenic 45.0%
CCTATAGTTGACTGAACCAG+GGG - chr4.4:15023759-15023778 None:intergenic 45.0%
CGAATTTATTCCCCACTTGC+CGG + chr4.4:15021963-15021982 MS.gene08988:CDS 45.0%
CTCCTATAGTTGACTGAACC+AGG - chr4.4:15023761-15023780 None:intergenic 45.0%
CTGAAACACCTGGATGTTGT+CGG + chr4.4:15025592-15025611 MS.gene08988:CDS 45.0%
CTGGTTCAGTCAACTATAGG+AGG + chr4.4:15023759-15023778 MS.gene08988:CDS 45.0%
GAAGACAAGAAGGTTATGGG+AGG + chr4.4:15022868-15022887 MS.gene08988:CDS 45.0%
GAAGAGGGTTCCTCTTGAAA+CGG - chr4.4:15021738-15021757 None:intergenic 45.0%
GACTGATCCTTGTTCCGTAA+TGG + chr4.4:15024312-15024331 MS.gene08988:CDS 45.0%
GAGAAATCACCTGAAACACC+TGG + chr4.4:15025582-15025601 MS.gene08988:CDS 45.0%
GAGTGAATCAAAGGTGGATC+TGG + chr4.4:15023074-15023093 MS.gene08988:CDS 45.0%
GATCCTATGGGTGATAGTAC+AGG + chr4.4:15025321-15025340 MS.gene08988:CDS 45.0%
GATCGGGAAGTAGCTGAATT+AGG + chr4.4:15021999-15022018 MS.gene08988:CDS 45.0%
GTGTTTATCTGTGCCATCTG+TGG + chr4.4:15023038-15023057 MS.gene08988:CDS 45.0%
TACAGGTACATCTGGTGATC+AGG + chr4.4:15023946-15023965 MS.gene08988:intron 45.0%
TCACACACCATTACGGAACA+AGG - chr4.4:15024322-15024341 None:intergenic 45.0%
TGATCCGAAATTCCCGCAAA+CGG + chr4.4:15021565-15021584 MS.gene08988:CDS 45.0%
TGATTTCTCCCTGTTGGACA+AGG - chr4.4:15025571-15025590 None:intergenic 45.0%
TGGAATTTCTCACCATAGGG+GGG - chr4.4:15026355-15026374 None:intergenic 45.0%
TGTTTCAGATGCTTTCCTGC+AGG - chr4.4:15026625-15026644 None:intergenic 45.0%
TTACCAGACACTGCAACACA+TGG + chr4.4:15024685-15024704 MS.gene08988:CDS 45.0%
TTCAGGTGATTTCTCCCTGT+TGG - chr4.4:15025577-15025596 None:intergenic 45.0%
TTTAGACTCTGAGCTTCAGG+AGG - chr4.4:15024511-15024530 None:intergenic 45.0%
TTTCTGGGTGCTAGAGATGT+TGG + chr4.4:15023105-15023124 MS.gene08988:CDS 45.0%
TTTGCTGCGGGAACTTGAAA+CGG - chr4.4:15021682-15021701 None:intergenic 45.0%
! AACGACACTCCTCTTTTGGA+TGG + chr4.4:15025873-15025892 MS.gene08988:CDS 45.0%
! ATAGGACCTAAAGGTGTGAC+TGG - chr4.4:15025507-15025526 None:intergenic 45.0%
! CCCCAAACTTCAGAAGCTTT+TGG + chr4.4:15025227-15025246 MS.gene08988:CDS 45.0%
! GATCTGGCTGCAGATTTTCT+GGG + chr4.4:15023090-15023109 MS.gene08988:CDS 45.0%
! GGTTCAAGTTCCGTTTCAAG+AGG + chr4.4:15021669-15021688 MS.gene08988:CDS 45.0%
! TCAGAGTTAGCCTCAACAGA+GGG - chr4.4:15024247-15024266 None:intergenic 45.0%
! TCCTCTTTTGGATGGAAGTC+AGG + chr4.4:15025881-15025900 MS.gene08988:CDS 45.0%
! TCTGAGGTATGCTCTGCATT+TGG - chr4.4:15023308-15023327 None:intergenic 45.0%
! TGTCAACGACACTCCTCTTT+TGG + chr4.4:15025869-15025888 MS.gene08988:CDS 45.0%
! TTCTGGAAAATGGCAGTGTG+AGG + chr4.4:15022039-15022058 MS.gene08988:CDS 45.0%
!! GGAAAGATGGCAATTTTGGC+TGG - chr4.4:15024159-15024178 None:intergenic 45.0%
!! GTGTTTCTGGTCAGATCCAT+AGG - chr4.4:15023339-15023358 None:intergenic 45.0%
!! GTTGGTAATGCTTTCGACCA+CGG + chr4.4:15023123-15023142 MS.gene08988:CDS 45.0%
!! TCGCCGTTTTCAGCAATTGA+TGG - chr4.4:15022104-15022123 None:intergenic 45.0%
!! TTTTCGGGAACTAACGCCAA+GGG - chr4.4:15025655-15025674 None:intergenic 45.0%
!!! CCCTCAGCTGGGTTTTTTTT+AGG + chr4.4:15023554-15023573 MS.gene08988:intron 45.0%
!! ATATATATATATAGATATTA+TGG + chr4.4:15023900-15023919 MS.gene08988:intron 5.0%
AAACGGAACTTGAACCGGAC+CGG - chr4.4:15021665-15021684 None:intergenic 50.0%
AAAGCCCTCTGCATCCTCTT+GGG - chr4.4:15025695-15025714 None:intergenic 50.0%
AAGGTCTTGGGCAACCTCTT+CGG - chr4.4:15025796-15025815 None:intergenic 50.0%
AATAAATTCGCCTCGCACGG+AGG - chr4.4:15021953-15021972 None:intergenic 50.0%
ACATGTGCGACGGAGCTAAT+TGG + chr4.4:15022677-15022696 MS.gene08988:intron 50.0%
ACCATAGGGGGGACACTATA+GGG - chr4.4:15026344-15026363 None:intergenic 50.0%
ATACACCTGTGGATGATGCG+AGG + chr4.4:15022123-15022142 MS.gene08988:CDS 50.0%
CAAGAAGGTTATGGGAGGTC+AGG + chr4.4:15022873-15022892 MS.gene08988:CDS 50.0%
CCCCTGGTTCAGTCAACTAT+AGG + chr4.4:15023756-15023775 MS.gene08988:CDS 50.0%
CGACAACATCCAGGTGTTTC+AGG - chr4.4:15025594-15025613 None:intergenic 50.0%
CGACGGAGCTAATTGGCTAT+TGG + chr4.4:15022684-15022703 MS.gene08988:intron 50.0%
CGATGTGAGGAATGTGGAAG+AGG + chr4.4:15022286-15022305 MS.gene08988:CDS 50.0%
CGTTCCGTTTGCGGGAATTT+CGG - chr4.4:15021572-15021591 None:intergenic 50.0%
CTTATCTGCACCCTCTGTTG+AGG + chr4.4:15024234-15024253 MS.gene08988:CDS 50.0%
CTTGGCGTTAGTTCCCGAAA+AGG + chr4.4:15025654-15025673 MS.gene08988:CDS 50.0%
GCACCATGGGTGATACCAAT+GGG + chr4.4:15022962-15022981 MS.gene08988:CDS 50.0%
GCTAAGGCTGCTGATCACAA+TGG + chr4.4:15023189-15023208 MS.gene08988:CDS 50.0%
GGAAAATGGCAGTGTGAGGA+CGG + chr4.4:15022043-15022062 MS.gene08988:CDS 50.0%
GGGAATAAATTCGCCTCGCA+CGG - chr4.4:15021956-15021975 None:intergenic 50.0%
GGTTCTCACCGGTGTAGTAT+TGG - chr4.4:15024827-15024846 None:intergenic 50.0%
GGTTGCCCAAGACCTTATGA+AGG + chr4.4:15025800-15025819 MS.gene08988:CDS 50.0%
GTAACCTGGGATGTCTTTGC+AGG + chr4.4:15023697-15023716 MS.gene08988:intron 50.0%
TACACCTGCCTTGTCCAACA+GGG + chr4.4:15025560-15025579 MS.gene08988:CDS 50.0%
TACTTCCCGATCAGAATCGC+CGG - chr4.4:15021991-15022010 None:intergenic 50.0%
TAGAAGCTAGCTGCGATGTG+AGG + chr4.4:15022273-15022292 MS.gene08988:CDS 50.0%
TAGCTGCGATGTGAGGAATG+TGG + chr4.4:15022280-15022299 MS.gene08988:CDS 50.0%
TCGGAGGAGTCTTGGAAAGA+TGG - chr4.4:15024172-15024191 None:intergenic 50.0%
TCTACCTTGTGCTACCACCA+AGG + chr4.4:15021926-15021945 MS.gene08988:CDS 50.0%
TGAAAACGGCGATACACCTG+TGG + chr4.4:15022112-15022131 MS.gene08988:CDS 50.0%
TGAACCTGCAAAGACATCCC+AGG - chr4.4:15023704-15023723 None:intergenic 50.0%
TGATACCAATGGGCCAGAAC+TGG + chr4.4:15022972-15022991 MS.gene08988:CDS 50.0%
TGCACCATGGGTGATACCAA+TGG + chr4.4:15022961-15022980 MS.gene08988:CDS 50.0%
TTCAGGTGAAAGAAGCCTGC+AGG + chr4.4:15026607-15026626 MS.gene08988:intron 50.0%
TTGATCCTCGCATCATCCAC+AGG - chr4.4:15022131-15022150 None:intergenic 50.0%
TTGGCAATTCGGAGGAGTCT+TGG - chr4.4:15024180-15024199 None:intergenic 50.0%
! CCCGTTCCTGTTCCTTTTTG+TGG + chr4.4:15021762-15021781 MS.gene08988:CDS 50.0%
! CTCAGAGTTAGCCTCAACAG+AGG - chr4.4:15024248-15024267 None:intergenic 50.0%
! GGATCTGGCTGCAGATTTTC+TGG + chr4.4:15023089-15023108 MS.gene08988:CDS 50.0%
!! AGGTTCTAAATCGCTGCCCA+CGG + chr4.4:15024991-15025010 MS.gene08988:intron 50.0%
!! CTTTTCGGGAACTAACGCCA+AGG - chr4.4:15025656-15025675 None:intergenic 50.0%
!!! CTGCCATTTTCCAGAACCGA+CGG - chr4.4:15022035-15022054 None:intergenic 50.0%
!!! GTTTTATGCTCCGTCGGTTC+TGG + chr4.4:15022022-15022041 MS.gene08988:CDS 50.0%
AACAGGAACGGGAACGGAAG+AGG - chr4.4:15021754-15021773 None:intergenic 55.0%
ACAGGAACGGGAACGGAAGA+GGG - chr4.4:15021753-15021772 None:intergenic 55.0%
AGATCGGACGTTCCGTTTGC+GGG - chr4.4:15021580-15021599 None:intergenic 55.0%
AGCTTTGCTGCGGGTGAATG+TGG - chr4.4:15021619-15021638 None:intergenic 55.0%
CAAAGCCCTCTGCATCCTCT+TGG - chr4.4:15025696-15025715 None:intergenic 55.0%
CACCATAGGGGGGACACTAT+AGG - chr4.4:15026345-15026364 None:intergenic 55.0%
CCACCATGTGTTGCAGTGTC+TGG - chr4.4:15024691-15024710 None:intergenic 55.0%
CCAGACACTGCAACACATGG+TGG + chr4.4:15024688-15024707 MS.gene08988:CDS 55.0%
GACAAGCTCCGACAACATCC+AGG - chr4.4:15025603-15025622 None:intergenic 55.0%
GACACTGCAACACATGGTGG+TGG + chr4.4:15024691-15024710 MS.gene08988:CDS 55.0%
GAGATCGGACGTTCCGTTTG+CGG - chr4.4:15021581-15021600 None:intergenic 55.0%
GGGAAGCTGATCAAAACCCC+TGG + chr4.4:15023740-15023759 MS.gene08988:CDS 55.0%
GTACACCTGCCTTGTCCAAC+AGG + chr4.4:15025559-15025578 MS.gene08988:CDS 55.0%
TCAGCTGCTAGATGCCGAAG+AGG + chr4.4:15025779-15025798 MS.gene08988:CDS 55.0%
TGGCCCATTGGTATCACCCA+TGG - chr4.4:15022968-15022987 None:intergenic 55.0%
TTCTCCCTGTTGGACAAGGC+AGG - chr4.4:15025567-15025586 None:intergenic 55.0%
! AGATGCCAGTTCTGGCCCAT+TGG - chr4.4:15022980-15022999 None:intergenic 55.0%
! AGGTCCTTGGTGGTAGCACA+AGG - chr4.4:15021933-15021952 None:intergenic 55.0%
! GTTGCAGTGTCTGGTAACGC+AGG - chr4.4:15024682-15024701 None:intergenic 55.0%
!! GCTCCGTCGGTTCTGGAAAA+TGG + chr4.4:15022029-15022048 MS.gene08988:CDS 55.0%
!! GGTTCTAAATCGCTGCCCAC+GGG + chr4.4:15024992-15025011 MS.gene08988:intron 55.0%
AAAGCTCACCGTACCCGCTC+CGG + chr4.4:15021633-15021652 MS.gene08988:CDS 60.0%
AATGTGGATGAGGCGGGTGG+CGG - chr4.4:15021603-15021622 None:intergenic 60.0%
CGGGTGAATGTGGATGAGGC+GGG - chr4.4:15021609-15021628 None:intergenic 60.0%
GCCCTATAGTGTCCCCCCTA+TGG + chr4.4:15026340-15026359 MS.gene08988:intron 60.0%
GCGGGTGAATGTGGATGAGG+CGG - chr4.4:15021610-15021629 None:intergenic 60.0%
GCTGCGGGTGAATGTGGATG+AGG - chr4.4:15021613-15021632 None:intergenic 60.0%
GGCTGTGCCTTAGAGCAGCT+TGG + chr4.4:15023210-15023229 MS.gene08988:CDS 60.0%
GGGTACGGTGAGCTTTGCTG+CGG - chr4.4:15021629-15021648 None:intergenic 60.0%
GGTACGGTGAGCTTTGCTGC+GGG - chr4.4:15021628-15021647 None:intergenic 60.0%
GTGAATGTGGATGAGGCGGG+TGG - chr4.4:15021606-15021625 None:intergenic 60.0%
TGAACCGGACCGGATCTGAC+CGG - chr4.4:15021655-15021674 None:intergenic 60.0%
GGATCTGACCGGAGCGGGTA+CGG - chr4.4:15021644-15021663 None:intergenic 65.0%
GTACCCGCTCCGGTCAGATC+CGG + chr4.4:15021643-15021662 MS.gene08988:CDS 65.0%
TATTCCCCACTTGCCGGCGC+CGG + chr4.4:15021969-15021988 MS.gene08988:CDS 65.0%
!! ATGAGGCGGGTGGCGGAGAT+CGG - chr4.4:15021596-15021615 None:intergenic 65.0%
CCACCAAGGACCTCCGTGCG+AGG + chr4.4:15021940-15021959 MS.gene08988:CDS 70.0%
CCGATCAGAATCGCCGGCGC+CGG - chr4.4:15021985-15022004 None:intergenic 70.0%
CCTCGCACGGAGGTCCTTGG+TGG - chr4.4:15021943-15021962 None:intergenic 70.0%
CGCTCCGGTCAGATCCGGTC+CGG + chr4.4:15021648-15021667 MS.gene08988:CDS 70.0%
CGGACCGGATCTGACCGGAG+CGG - chr4.4:15021650-15021669 None:intergenic 70.0%
GGACCGGATCTGACCGGAGC+GGG - chr4.4:15021649-15021668 None:intergenic 70.0%
TCGCCTCGCACGGAGGTCCT+TGG - chr4.4:15021946-15021965 None:intergenic 70.0%
!! AATCGCCGGCGCCGGCAAGT+GGG - chr4.4:15021977-15021996 None:intergenic 70.0%
!! CCGGCGCCGGCGATTCTGAT+CGG + chr4.4:15021982-15022001 MS.gene08988:CDS 70.0%
!! CGGCGCCGGCGATTCTGATC+GGG + chr4.4:15021983-15022002 MS.gene08988:CDS 70.0%
!! ATCGCCGGCGCCGGCAAGTG+GGG - chr4.4:15021976-15021995 None:intergenic 75.0%
!! GAATCGCCGGCGCCGGCAAG+TGG - chr4.4:15021978-15021997 None:intergenic 75.0%


Chromosome Type Strat End Strand Name
chr4.4 gene 15021558 15026865 15021558 ID=MS.gene08988
chr4.4 mRNA 15021558 15026865 15021558 ID=MS.gene08988.t1;Parent=MS.gene08988
chr4.4 exon 15021558 15022406 15021558 ID=MS.gene08988.t1.exon1;Parent=MS.gene08988.t1
chr4.4 CDS 15021558 15022406 15021558 ID=cds.MS.gene08988.t1;Parent=MS.gene08988.t1
chr4.4 exon 15022517 15022607 15022517 ID=MS.gene08988.t1.exon2;Parent=MS.gene08988.t1
chr4.4 CDS 15022517 15022607 15022517 ID=cds.MS.gene08988.t1;Parent=MS.gene08988.t1
chr4.4 exon 15022842 15023428 15022842 ID=MS.gene08988.t1.exon3;Parent=MS.gene08988.t1
chr4.4 CDS 15022842 15023428 15022842 ID=cds.MS.gene08988.t1;Parent=MS.gene08988.t1
chr4.4 exon 15023719 15023821 15023719 ID=MS.gene08988.t1.exon4;Parent=MS.gene08988.t1
chr4.4 CDS 15023719 15023821 15023719 ID=cds.MS.gene08988.t1;Parent=MS.gene08988.t1
chr4.4 exon 15023951 15024837 15023951 ID=MS.gene08988.t1.exon5;Parent=MS.gene08988.t1
chr4.4 CDS 15023951 15024837 15023951 ID=cds.MS.gene08988.t1;Parent=MS.gene08988.t1
chr4.4 exon 15024993 15025095 15024993 ID=MS.gene08988.t1.exon6;Parent=MS.gene08988.t1
chr4.4 CDS 15024993 15025095 15024993 ID=cds.MS.gene08988.t1;Parent=MS.gene08988.t1
chr4.4 exon 15025205 15025902 15025205 ID=MS.gene08988.t1.exon7;Parent=MS.gene08988.t1
chr4.4 CDS 15025205 15025902 15025205 ID=cds.MS.gene08988.t1;Parent=MS.gene08988.t1
chr4.4 exon 15026612 15026710 15026612 ID=MS.gene08988.t1.exon8;Parent=MS.gene08988.t1
chr4.4 CDS 15026612 15026710 15026612 ID=cds.MS.gene08988.t1;Parent=MS.gene08988.t1
chr4.4 exon 15026785 15026865 15026785 ID=MS.gene08988.t1.exon9;Parent=MS.gene08988.t1
chr4.4 CDS 15026785 15026865 15026785 ID=cds.MS.gene08988.t1;Parent=MS.gene08988.t1
Gene Sequence

>MS.gene08988

ATGGACGTGATCCGAAATTCCCGCAAACGGAACGTCCGATCTCCGCCACCCGCCTCATCCACATTCACCCGCAGCAAAGCTCACCGTACCCGCTCCGGTCAGATCCGGTCCGGTTCAAGTTCCGTTTCAAGTTCCCGCAGCAAAAAGAATCAACCATACTCAGTTCCGGTTCAAGTTCCGTTTCAAGAGGAACCCTCTTCCGTTCCCGTTCCTGTTCCTTTTTGTGGAAACGATGTAACCAAAGGACTTTCAGATTCGGAATTCAAGAATCTAATTCATGATATTTGCAATGAATATTGTGAATCAGATTCCGAAGATGACGATCTTGTTAAGGATCCTTTCAAGAAAGCAAAACGTGATGATGCTAATCTACCTTGTGCTACCACCAAGGACCTCCGTGCGAGGCGAATTTATTCCCCACTTGCCGGCGCCGGCGATTCTGATCGGGAAGTAGCTGAATTAGGGTTTTATGCTCCGTCGGTTCTGGAAAATGGCAGTGTGAGGACGGAATCAGCTGAAATTTCTGAATTAGGGTTTGGATCGCCATCAATTGCTGAAAACGGCGATACACCTGTGGATGATGCGAGGATCAAATCTAATAAGATTCTCGACGAGCCTCTGAATTTTGATAGGGGAATCACCAAGCTGTCAGATGAAGATTTGGGCGAAGAATCATTACAAACGACACCACCTAATGATGTCATCTGTGTAGGTTTAGAAGCTAGCTGCGATGTGAGGAATGTGGAAGAGGCAGACACACTTGTTGTCAAAGATATGTCTCCTGCTGCTAATGTAGCTGAAAATTCAAGCGAGGGCCAGAAAAATAGCTCTGTTCAAAGGAGTAAATCTGTAAGGCCTTTCAATTTTTATTTTCATCATTGCATATGTGTTGGTTAATAATTTTTGTACAAATTACTTTTTATATGAAATTTTGTTAGTTGATTGGATTCTTGATGCAGGTACTCAAACCGCGTTTACCTTTGAAATTGTTCAAAGCCCCAGGTTCATTCAATTACAAAAGGCTAATGGATGCTATGGGAGATAATTTCGGTAATTGTGTTATGCAGAAAGTCCTTTATTATTTAGTTGTTTGCATAGTGTAGATCATGATTTAGTTTTACATGTGCGACGGAGCTAATTGGCTATTGGATACTATTGTACGTGATTTTGGTAGTTGTTCTATGTAGAGGATCCTTTGTTATTTATTGATTGAATAGTGTAGAATGTAGATGATGAATTAGCTTGATATGTGCGATGGAACTAATTGGCATCGTAATTTTATAGGAATACCGAAATTGGGTCATTGTCATGAAGACAAGAAGGTTATGGGAGGTCAGGGATTGAAACTTCCTTTGACATCTGATAATCATGAAGGTTCTAAGCCTGAAACTAAGACTGATAGTTGCACCATGGGTGATACCAATGGGCCAGAACTGGCATCTTCACCAATGCAAGTAGATACTGAGAAAGTGAATGGCGAGTGTTTATCTGTGCCATCTGTGGATGATAAATGCTTGAGTGAATCAAAGGTGGATCTGGCTGCAGATTTTCTGGGTGCTAGAGATGTTGGTAATGCTTTCGACCACGGTGATGTTAAGCAAGATTCTTTCAACAGGAATAATCTTGACTGTGCTAAGGCTGCTGATCACAATGGCTGTGCCTTAGAGCAGCTTGGTGTTTTGAATGAAGATTGTATACCAATGACTCGTGATACTGAAATATGTGATGATATTGTGCTCAATGGAGACCAAATGCAGAGCATACCTCAGAATGTCAAACCTATGGATCTGACCAGAAACACTCAAGAAAGCACTGTTGAAGCGTTATACCCCAAAGCCCATGAGAGAAATAATCCACTCAAGAGCAAACATGTAAGAATCTGTCATGTTTTTAAATATTTGTTTTCTGCCAGTTATGGGTTAGACATTTTGTTGCTGATCTTTACTAAATTATAGATATACTACCTAATACCTAATACAATGTCAATTTGGTTAAACCCTCAGCTGGGTTTTTTTTAGGGTTGTTGATATGTTTAAACTTCCACTATAGTGGCTGGTGAACTTGCTAACTTCTTCTGTGTTTAATTTTGACAATATATGCATATACATGGTTTTGTATTTGTTGGCAATTATATATCATGTAACCTGGGATGTCTTTGCAGGTTCATAAACCATATTTGCACGGGAAGCTGATCAAAACCCCTGGTTCAGTCAACTATAGGAGGTTGCTTCCATATTTTAAGAATCTTCCCAAAGATGACTATGGTAACCACCACGTTTTCAACCACTTATGCAATACAATATTAATTATATATATATATATATATATATATATATATATATATATATATATATAGATATTATGGACACTGAAAGTGCTTGCTGATTTTACAGGTACATCTGGTGATCAGGCCCATCATAAAAATGAAGAGGCGGATTTATATGCAAAGGAGTTCCAACTTCCTTTGCCATCTCAAAGTGAAGAAGCTTCTATTAGCAGACAAATGACTGTCAGTGGCTCTATCCATGACAAAGTTGACTTGAATACTTTGGAAAACAACATCTCAGTCAATCCTGCTAATATGTCATCTCATGGCTACCAGCCAAAATTGCCATCTTTCCAAGACTCCTCCGAATTGCCAATACAATTTGACGCAAAAGAAATGGCACATGAGTGCTTATCTGCACCCTCTGTTGAGGCTAACTCTGAGAAAACTGTCATCAGTTCTAAAGATGAATGCTTGAGTGAATCAGCGACTGATCCTTGTTCCGTAATGGTGTGTGATAAGATTGTCACAAATGGTGGGTCACCACCCAAAGAACAAAATTTGCTTAATGTCAATAATGATATCTCCAACCTTTCATTTGAGCATCATTCAAGCAATGAGAAAGGATTCACTGAAAGAAAGCAGTTTGTGAGTCTGGAGAAGCATGAATCTGTTAGCAGATGTCCTCCTGAAGCTCAGAGTCTAAATCAATTGGATCCTAATATGTTAGATGCTGAAGAGAATGAAACAAGCAGCCATGCAATTTGCAAAAATGACGATGTTGTGGTTTTATGTCACGTCACCATCTCAAATGAAGAATCTAGTTCACAATCAGAGAAGATTATTTCTGAAAAACCTGCGTTACCAGACACTGCAACACATGGTGGTGGCAAAGAAAAAAGTCTTCTGAATGGCCTAGTTAATGGTTCAAAGATGCCTTCAAAAGGAAGCAATAACAAAAAGGCTAGTTTTGCTGGTGAGATGAAAAATGGTTTGGAATCCAATACTACACCGGTGAGAACCATAATCTTTTGTGTATATATCTCCAAAAGACCTGCATACTTTTAAGATTTACCCCTCTCTTTCTCATTGATTATAATGATACGTTTTTCTTTTATGTTGATTTTTTTCTTTCTTGAAAATATATTTGATCAAGTAATTTTGAACAGGTTCTAAATCGCTGCCCACGGGTTAAGTTTTTAAAACATGCTGGGTCTTTGAACTACAAAAGATTGCTTCCGATTTTGTTGGAAAATGAGAAGTCTAATTCCTGTAAGTATTGGTTTTTATTCTATTGGAAGATATCACTCAATTTTATAATTTTATTTTTCATTTTTTTGATTGGCACCGTTTTTTAAAACTAAACTTATACTACTTTTAGGTGCTTCGAATAATGATCATCGCCCCAAACTTCAGAAGCTTTTGGATCACACACCACTTCTGCCAATTTCAGATTCAAACTTGCAAGTAACTCCTGGAAGTGATTCAAATGATTGTGATCCTATGGGTGATAGTACAGGAAATTCTGGTGCTCAGCAAGAAACAGAGTTGCAAGCTTGTGACTTAAATAGTGATAGTTTAAGCCCAAGATCTCAACTACAAGATAAACAGATTGTGTCAAATAGACCCTACTATCTCGAGAACTCCTTTGTTTCACCAATTTCTGTTCATAGAGATTTACCAGTCACACCTTTAGGTCCTATAGCTGATCAAGTTGTCACTAGAGAAGAAGTGGGTACACCTGCCTTGTCCAACAGGGAGAAATCACCTGAAACACCTGGATGTTGTCGGAGCTTGTCCGAAATGAAAGTCACAGATCAACTTGATGCCCTTGGCGTTAGTTCCCGAAAAGGAATTTTGAGAAAAAACCCAAGAGGATGCAGAGGGCTTTGCACATGTTTGAACTGTGTTTCTTTTCGCCTTCATGCAGAAAGAGCATTTGAATTTTCTAGAAATCAGCTGCTAGATGCCGAAGAGGTTGCCCAAGACCTTATGAAGGAAGTATCCCATCTCAGAAACATGTTGTTAGAAAGATGTACTGATAATGTCAACGACACTCCTCTTTTGGATGGAAGTCAGGTGAGTGCCACATGATGTTGATATGACTATTACACTAACATTCGTTTTCCTTTCTTTTCTGATCATTTTATCATTCTTCACGATAATAACTGAAATGGCTACATTTCTTTTTATCTGCTAGCAATGCATCTTATTATGCAAAGCTTGTGATGGCTCTCAGTTTAATAATTATCTCATCCGATAAGTTTGGTTATTTAAATACTCGTCTCCTTGCAATTCCTTTCACTATTATTTCATTTCACAAATTGTCTATTTTTCTCTCTTATGATAAAAAAATAAATGAGCTAGATCTTATCAAATATTGTGAAAAATTATCAAGAGAGATTGATATAAATTTATTTTCTCAGGTGTAATATTAACACTAGAGCTTTCATTTCCGACAAGTTTATAATATTTTGCTTATAACCATTTAGAAATAAAACCTCAAGTAAATTCTGGCCCTATAGTGTCCCCCCTATGGTGAGAAATTCCAAGTAACTTTGACATTTTTTTAGTGCATTTGACCTTATGAGATAGCTTCGTTGTCCTTATTTGACTGTTTTTCTACTGTTCATAAGATTTTCTAGACTTAGTCTAGTTCATCACCCGTGTAACTTAATAAATTCAGCCATTATCAACGTCTTTATATGCAAAATAGTGATAATGTAGCATAAAAATAAGAGGAAAATACTAATCAAACTAAGTCATTTTTTTATTTGAATATTTTCAGGTGAAAGAAGCCTGCAGGAAAGCATCTGAAACAGAACAACTTGCAAAGGATCGACTTAGCCAGATGAATGATGATCTTAACATACATTGCAGAACACCTGTATGTGCATACCTTATTCCCAAAATTTGTTCCTCCAAATAAACAATTTGTTTATTTTAGCTTGTTTTGTGCAGAGTCTGCAGCGACCAAGTGTTAAGTTTTCAGATCGTGTTGAGGAAAAGGTCATTCAACCAAACAGATTAAAAAATGGTTAA

Protein sequence

>MS.gene08988.t1

MDVIRNSRKRNVRSPPPASSTFTRSKAHRTRSGQIRSGSSSVSSSRSKKNQPYSVPVQVPFQEEPSSVPVPVPFCGNDVTKGLSDSEFKNLIHDICNEYCESDSEDDDLVKDPFKKAKRDDANLPCATTKDLRARRIYSPLAGAGDSDREVAELGFYAPSVLENGSVRTESAEISELGFGSPSIAENGDTPVDDARIKSNKILDEPLNFDRGITKLSDEDLGEESLQTTPPNDVICVGLEASCDVRNVEEADTLVVKDMSPAANVAENSSEGQKNSSVQRSKSVLKPRLPLKLFKAPGSFNYKRLMDAMGDNFGIPKLGHCHEDKKVMGGQGLKLPLTSDNHEGSKPETKTDSCTMGDTNGPELASSPMQVDTEKVNGECLSVPSVDDKCLSESKVDLAADFLGARDVGNAFDHGDVKQDSFNRNNLDCAKAADHNGCALEQLGVLNEDCIPMTRDTEICDDIVLNGDQMQSIPQNVKPMDLTRNTQESTVEALYPKAHERNNPLKSKHVHKPYLHGKLIKTPGSVNYRRLLPYFKNLPKDDYGTSGDQAHHKNEEADLYAKEFQLPLPSQSEEASISRQMTVSGSIHDKVDLNTLENNISVNPANMSSHGYQPKLPSFQDSSELPIQFDAKEMAHECLSAPSVEANSEKTVISSKDECLSESATDPCSVMVCDKIVTNGGSPPKEQNLLNVNNDISNLSFEHHSSNEKGFTERKQFVSLEKHESVSRCPPEAQSLNQLDPNMLDAEENETSSHAICKNDDVVVLCHVTISNEESSSQSEKIISEKPALPDTATHGGGKEKSLLNGLVNGSKMPSKGSNNKKASFAGEMKNGLESNTTPVLNRCPRVKFLKHAGSLNYKRLLPILLENEKSNSCASNNDHRPKLQKLLDHTPLLPISDSNLQVTPGSDSNDCDPMGDSTGNSGAQQETELQACDLNSDSLSPRSQLQDKQIVSNRPYYLENSFVSPISVHRDLPVTPLGPIADQVVTREEVGTPALSNREKSPETPGCCRSLSEMKVTDQLDALGVSSRKGILRKNPRGCRGLCTCLNCVSFRLHAERAFEFSRNQLLDAEEVAQDLMKEVSHLRNMLLERCTDNVNDTPLLDGSQVKEACRKASETEQLAKDRLSQMNDDLNIHCRTPSLQRPSVKFSDRVEEKVIQPNRLKNG