Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene25639.t1 | XP_013450311.1 | 98.1 | 207 | 3 | 1 | 1 | 207 | 1 | 206 | 1.60E-105 | 392.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene25639.t1 | O65731 | 93.3 | 195 | 13 | 0 | 13 | 207 | 3 | 197 | 3.3e-96 | 352.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene25639.t1 | I3SKT5 | 98.1 | 207 | 3 | 1 | 1 | 207 | 1 | 206 | 1.1e-105 | 392.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049306 | MS.gene25639 | 0.864629 | 1.06E-64 | -1.69E-46 |
| MS.gene049387 | MS.gene25639 | 0.851962 | 6.30E-61 | -1.69E-46 |
| MS.gene050134 | MS.gene25639 | 0.881907 | 1.62E-70 | -1.69E-46 |
| MS.gene050791 | MS.gene25639 | 0.843872 | 1.07E-58 | -1.69E-46 |
| MS.gene051925 | MS.gene25639 | 0.872374 | 3.34E-67 | -1.69E-46 |
| MS.gene051927 | MS.gene25639 | 0.858577 | 7.49E-63 | -1.69E-46 |
| MS.gene051984 | MS.gene25639 | 0.835155 | 1.98E-56 | -1.69E-46 |
| MS.gene052209 | MS.gene25639 | 0.81367 | 2.28E-51 | -1.69E-46 |
| MS.gene052664 | MS.gene25639 | 0.840274 | 9.59E-58 | -1.69E-46 |
| MS.gene052666 | MS.gene25639 | 0.827941 | 1.18E-54 | -1.69E-46 |
| MS.gene053224 | MS.gene25639 | 0.858635 | 7.20E-63 | -1.69E-46 |
| MS.gene054624 | MS.gene25639 | 0.861904 | 7.39E-64 | -1.69E-46 |
| MS.gene054662 | MS.gene25639 | 0.827346 | 1.65E-54 | -1.69E-46 |
| MS.gene057272 | MS.gene25639 | 0.880994 | 3.47E-70 | -1.69E-46 |
| MS.gene057321 | MS.gene25639 | 0.842708 | 2.19E-58 | -1.69E-46 |
| MS.gene057641 | MS.gene25639 | 0.8214 | 4.12E-53 | -1.69E-46 |
| MS.gene057643 | MS.gene25639 | 0.841383 | 4.91E-58 | -1.69E-46 |
| MS.gene058994 | MS.gene25639 | 0.811308 | 7.47E-51 | -1.69E-46 |
| MS.gene059340 | MS.gene25639 | 0.878739 | 2.20E-69 | -1.69E-46 |
| MS.gene060483 | MS.gene25639 | 0.850394 | 1.75E-60 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene070601 | MS.gene25639 | PPI |
| MS.gene46489 | MS.gene25639 | PPI |
| MS.gene25639 | MS.gene39207 | PPI |
| MS.gene25639 | MS.gene007033 | PPI |
| MS.gene25639 | MS.gene034626 | PPI |
| MS.gene25639 | MS.gene070600 | PPI |
| MS.gene25639 | MS.gene23038 | PPI |
| MS.gene25639 | MS.gene25236 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene25639.t1 | MTR_7g107380 | 98.068 | 207 | 3 | 1 | 1 | 207 | 1 | 206 | 1.67e-150 | 416 |
| MS.gene25639.t1 | MTR_1g054310 | 94.737 | 209 | 7 | 3 | 1 | 207 | 33 | 239 | 8.99e-141 | 392 |
| MS.gene25639.t1 | MTR_0515s0010 | 90.789 | 76 | 7 | 0 | 46 | 121 | 5 | 80 | 5.87e-47 | 149 |
| MS.gene25639.t1 | MTR_0306s0010 | 90.789 | 76 | 7 | 0 | 46 | 121 | 5 | 80 | 5.87e-47 | 149 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene25639.t1 | AT2G37270 | 88.557 | 201 | 22 | 1 | 8 | 207 | 7 | 207 | 6.04e-132 | 369 |
| MS.gene25639.t1 | AT2G37270 | 88.557 | 201 | 22 | 1 | 8 | 207 | 7 | 207 | 6.04e-132 | 369 |
| MS.gene25639.t1 | AT3G11940 | 89.529 | 191 | 20 | 0 | 17 | 207 | 17 | 207 | 2.30e-130 | 365 |
| MS.gene25639.t1 | AT3G11940 | 89.529 | 191 | 20 | 0 | 17 | 207 | 17 | 207 | 2.30e-130 | 365 |
| MS.gene25639.t1 | ATCG01240 | 34.532 | 139 | 78 | 5 | 71 | 207 | 22 | 149 | 9.93e-11 | 58.2 |
| MS.gene25639.t1 | ATCG00900 | 34.532 | 139 | 78 | 5 | 71 | 207 | 22 | 149 | 9.93e-11 | 58.2 |
Find 0 sgRNAs with CRISPR-Local
Find 181 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAGTTGAATTATTATTAAT+TGG | + | 51726:18011-18030 | MS.gene25639:intron | 10.0% |
| !!! | AATACTTTTTTGAATATTTA+AGG | + | 51726:19346-19365 | MS.gene25639:intron | 10.0% |
| !!! | AATTATATTATTTTATGTAG+TGG | + | 51726:19711-19730 | MS.gene25639:intron | 10.0% |
| !!! | ATACTTTTTTGAATATTTAA+GGG | + | 51726:19347-19366 | MS.gene25639:intron | 10.0% |
| !!! | TTTCAATAAATATTTTATCT+TGG | + | 51726:18599-18618 | MS.gene25639:intron | 10.0% |
| !! | AATTTATCTGTTTACATATA+GGG | - | 51726:18778-18797 | None:intergenic | 15.0% |
| !! | TAAAATAAAAAAACCCATTA+AGG | - | 51726:16977-16996 | None:intergenic | 15.0% |
| !! | TAATTTATCTGTTTACATAT+AGG | - | 51726:18779-18798 | None:intergenic | 15.0% |
| !!! | AAACTTTAAAGATTGAATAA+TGG | - | 51726:19946-19965 | None:intergenic | 15.0% |
| !!! | ATAAATCAACTTGAATTTTT+TGG | + | 51726:17650-17669 | MS.gene25639:intron | 15.0% |
| !!! | GCTATTTTCATAATTTATAT+TGG | + | 51726:16823-16842 | MS.gene25639:intron | 15.0% |
| !!! | GTTTTTAAATTGTTAAAACT+GGG | + | 51726:18046-18065 | MS.gene25639:intron | 15.0% |
| !!! | TGTTTTTAAATTGTTAAAAC+TGG | + | 51726:18045-18064 | MS.gene25639:intron | 15.0% |
| !! | AATAATATGAAACAGATCAA+TGG | - | 51726:17451-17470 | None:intergenic | 20.0% |
| !! | AGTCAATATATATCAATCAT+AGG | - | 51726:17374-17393 | None:intergenic | 20.0% |
| !! | ATGATTTATTATTTCCCTAT+TGG | + | 51726:18761-18780 | MS.gene25639:intron | 20.0% |
| !! | GATTACAATATGACAAAATA+AGG | - | 51726:18563-18582 | None:intergenic | 20.0% |
| !! | GTATAAGTGATCAAATATAT+AGG | + | 51726:18188-18207 | MS.gene25639:intron | 20.0% |
| !! | GTCAATATATATCAATCATA+GGG | - | 51726:17373-17392 | None:intergenic | 20.0% |
| !! | TATTAACAATTAACTGTGTA+TGG | + | 51726:19546-19565 | MS.gene25639:intron | 20.0% |
| !! | TCACTTATACATAACAAATA+AGG | - | 51726:18178-18197 | None:intergenic | 20.0% |
| !! | TGTCATATTGTAATCAAATT+TGG | + | 51726:18568-18587 | MS.gene25639:intron | 20.0% |
| !! | TTTATAGCATTATAACTACA+TGG | - | 51726:18236-18255 | None:intergenic | 20.0% |
| !!! | ATGATTATTTGTTTTCCTAT+TGG | + | 51726:17530-17549 | MS.gene25639:intron | 20.0% |
| !!! | ATGCTATAAATATTTTGTGA+TGG | + | 51726:18246-18265 | MS.gene25639:intron | 20.0% |
| !!! | ATTTTAATAAAACAAAGTCC+AGG | - | 51726:17876-17895 | None:intergenic | 20.0% |
| !!! | TGTTTTGTGATCAAATATAT+AGG | + | 51726:18271-18290 | MS.gene25639:intron | 20.0% |
| !!! | TTGAAATTGAATTTTTGATG+CGG | + | 51726:17470-17489 | MS.gene25639:intron | 20.0% |
| ! | AATCTAAATAGGTCCTTAAT+GGG | + | 51726:16961-16980 | MS.gene25639:intron | 25.0% |
| ! | ACATATCCTAAAACTAAAAC+TGG | - | 51726:19677-19696 | None:intergenic | 25.0% |
| ! | AGAAAACAAATTCAGTACAT+TGG | - | 51726:19969-19988 | None:intergenic | 25.0% |
| ! | AGTAATCAATTAATCATGCA+TGG | + | 51726:18623-18642 | MS.gene25639:intron | 25.0% |
| ! | ATTAAAGTAGTAAAGTGTGA+AGG | + | 51726:18812-18831 | MS.gene25639:intron | 25.0% |
| ! | ATTGAAAGGAGAAAATGAAA+TGG | - | 51726:19501-19520 | None:intergenic | 25.0% |
| ! | CGAGAAACAAATTGTAAATA+AGG | + | 51726:19592-19611 | MS.gene25639:intron | 25.0% |
| ! | GAAAAAAGTGACAAATGATA+AGG | - | 51726:17608-17627 | None:intergenic | 25.0% |
| ! | GATGATTTATTGTTTCCTAT+TGG | + | 51726:18101-18120 | MS.gene25639:intron | 25.0% |
| ! | TAAATCATCATTTCATTCTC+CGG | - | 51726:18090-18109 | None:intergenic | 25.0% |
| ! | TCAAATAAGCCAATCTAAAT+AGG | + | 51726:16950-16969 | MS.gene25639:intron | 25.0% |
| ! | TGATTAATACTTGATAGAGA+AGG | + | 51726:18374-18393 | MS.gene25639:intron | 25.0% |
| ! | TTAATTCAAAGCAAAAACTG+AGG | + | 51726:19632-19651 | MS.gene25639:intron | 25.0% |
| ! | TTGTTTATTCTCACTTTGTT+TGG | + | 51726:17967-17986 | MS.gene25639:intron | 25.0% |
| !! | CTTTAAAGATTGAATAATGG+TGG | - | 51726:19943-19962 | None:intergenic | 25.0% |
| !! | GTAATTTTTACTTGTACGAA+AGG | + | 51726:18668-18687 | MS.gene25639:intron | 25.0% |
| !!! | AAGTTTGAAATCTTTTCTTG+TGG | + | 51726:19182-19201 | MS.gene25639:intron | 25.0% |
| !!! | AATTGTTTGTTTTTTTCCTC+TGG | + | 51726:19143-19162 | MS.gene25639:intron | 25.0% |
| !!! | ACTATTTTAGCTGTTAAGAT+TGG | + | 51726:18430-18449 | MS.gene25639:intron | 25.0% |
| !!! | CTATTTTAGCTGTTAAGATT+GGG | + | 51726:18431-18450 | MS.gene25639:intron | 25.0% |
| !!! | GATGATTTTTTGTTTCCTAT+TGG | + | 51726:18486-18505 | MS.gene25639:intron | 25.0% |
| !!! | TATTTTAGCTGTTAAGATTG+GGG | + | 51726:18432-18451 | MS.gene25639:intron | 25.0% |
| !!! | TATTTTCAAGTAACTCATGT+CGG | + | 51726:16918-16937 | MS.gene25639:intron | 25.0% |
| !!! | TTAAGAATTTTGACAATGCA+TGG | + | 51726:17689-17708 | MS.gene25639:intron | 25.0% |
| AATACTTGATAGAGAAGGAT+AGG | + | 51726:18379-18398 | MS.gene25639:intron | 30.0% | |
| AATCTTGCATCATTACTACA+AGG | - | 51726:19118-19137 | None:intergenic | 30.0% | |
| ACAGCCATAGTTATCAATAT+TGG | + | 51726:18987-19006 | MS.gene25639:intron | 30.0% | |
| ACATGCATTATTACTGTTGA+GGG | - | 51726:17903-17922 | None:intergenic | 30.0% | |
| ACCAGTTGTTAGAAGATATA+TGG | - | 51726:19826-19845 | None:intergenic | 30.0% | |
| ATACAAAAACGTCATCATCT+AGG | - | 51726:18135-18154 | None:intergenic | 30.0% | |
| ATCCTAAAACTAAAACTGGT+TGG | - | 51726:19673-19692 | None:intergenic | 30.0% | |
| ATCTTGCATCATTACTACAA+GGG | - | 51726:19117-19136 | None:intergenic | 30.0% | |
| ATTCAGGTATTCAAACCAAT+AGG | - | 51726:17548-17567 | None:intergenic | 30.0% | |
| CAATCTAAATAGGTCCTTAA+TGG | + | 51726:16960-16979 | MS.gene25639:intron | 30.0% | |
| CAGCCATAGTTATCAATATT+GGG | + | 51726:18988-19007 | MS.gene25639:intron | 30.0% | |
| CATTAAGGACCTATTTAGAT+TGG | - | 51726:16962-16981 | None:intergenic | 30.0% | |
| CTGCTTAATATGTCTTGATT+TGG | + | 51726:17496-17515 | MS.gene25639:intron | 30.0% | |
| GCATCAACTATAACTTGAAT+TGG | - | 51726:17307-17326 | None:intergenic | 30.0% | |
| GGGAAAATAACAAAATGCAA+AGG | - | 51726:17353-17372 | None:intergenic | 30.0% | |
| TACAAAAAATGCCATCATTC+AGG | - | 51726:17564-17583 | None:intergenic | 30.0% | |
| TCAGATAGAGCTAATACAAA+AGG | - | 51726:17578-17597 | None:intergenic | 30.0% | |
| TCCTAAAACTAAAACTGGTT+GGG | - | 51726:19672-19691 | None:intergenic | 30.0% | |
| TTGATTTACTGTTTCCCTAT+TGG | + | 51726:17799-17818 | MS.gene25639:intron | 30.0% | |
| ! | CAACCCAATATTGATAACTA+TGG | - | 51726:18994-19013 | None:intergenic | 30.0% |
| !! | GTACTGAATTTGTTTTCTCT+TGG | + | 51726:19971-19990 | MS.gene25639:intron | 30.0% |
| !! | TTGTTTCCTATTGGTTTGAT+TGG | + | 51726:18110-18129 | MS.gene25639:intron | 30.0% |
| !!! | ATTTTAGCTGTTAAGATTGG+GGG | + | 51726:18433-18452 | MS.gene25639:intron | 30.0% |
| AAACAACGGAAAGAAACTCA+TGG | + | 51726:17225-17244 | MS.gene25639:CDS | 35.0% | |
| AACAAGTTGTTCATCCAAAC+AGG | - | 51726:16737-16756 | None:intergenic | 35.0% | |
| AATAATGGTGGTATACCTGT+TGG | - | 51726:19931-19950 | None:intergenic | 35.0% | |
| AATACAAAATGCCATCATCC+AGG | - | 51726:19297-19316 | None:intergenic | 35.0% | |
| AATCCTACCCAAATTACACA+CGG | - | 51726:19407-19426 | None:intergenic | 35.0% | |
| AATTGTCACAGCTTAAGCTT+TGG | + | 51726:18957-18976 | MS.gene25639:intron | 35.0% | |
| ACAAGTTGTTCATCCAAACA+GGG | - | 51726:16736-16755 | None:intergenic | 35.0% | |
| AGCTTGACTTCGTTTAGATT+GGG | - | 51726:16565-16584 | None:intergenic | 35.0% | |
| AGGAACATATGTTGCATGTT+TGG | - | 51726:17113-17132 | None:intergenic | 35.0% | |
| ATACAAAAATGCCATCATGC+AGG | - | 51726:17833-17852 | None:intergenic | 35.0% | |
| ATCTAGCCAATCAAACCAAT+AGG | - | 51726:18504-18523 | None:intergenic | 35.0% | |
| ATCTAGGCAATCAAACCAAT+AGG | - | 51726:18119-18138 | None:intergenic | 35.0% | |
| CACATGCATTATTACTGTTG+AGG | - | 51726:17904-17923 | None:intergenic | 35.0% | |
| CTATAGAAATAAGCCCTGTT+TGG | + | 51726:16720-16739 | MS.gene25639:intron | 35.0% | |
| GCCATATATCTTCTAACAAC+TGG | + | 51726:19822-19841 | MS.gene25639:CDS | 35.0% | |
| GTGACAAATGATAAGGAGAA+TGG | - | 51726:17601-17620 | None:intergenic | 35.0% | |
| TAAGACAATTGCTGAATGCT+TGG | + | 51726:19872-19891 | MS.gene25639:CDS | 35.0% | |
| TAAGCAATAAACATCACCAG+AGG | - | 51726:19162-19181 | None:intergenic | 35.0% | |
| TCTCAGCACATAACATTGAA+AGG | - | 51726:19515-19534 | None:intergenic | 35.0% | |
| TCTTGCATCATTACTACAAG+GGG | - | 51726:19116-19135 | None:intergenic | 35.0% | |
| TGGTTTGAATACCTGAATGA+TGG | + | 51726:17550-17569 | MS.gene25639:intron | 35.0% | |
| TGTTAGCAAAGAACCAAACA+AGG | - | 51726:20003-20022 | None:intergenic | 35.0% | |
| ! | CTCTTGGATTTTTCCTTGTT+TGG | + | 51726:19987-20006 | MS.gene25639:intron | 35.0% |
| ! | GAAATCTTTTCTTGTGGTAG+AGG | + | 51726:19188-19207 | MS.gene25639:intron | 35.0% |
| !! | CAAACAGGGCTTATTTCTAT+AGG | - | 51726:16722-16741 | None:intergenic | 35.0% |
| !! | TAGGTGGGTTGGTTATTAAT+TGG | + | 51726:18398-18417 | MS.gene25639:intron | 35.0% |
| !!! | TACAACTAGCTTTTGATTGC+TGG | + | 51726:18721-18740 | MS.gene25639:intron | 35.0% |
| !!! | TCCCAACCAGTTTTAGTTTT+AGG | + | 51726:19668-19687 | MS.gene25639:intron | 35.0% |
| AAGTCAAGCTCTTCAACCAA+TGG | + | 51726:16575-16594 | MS.gene25639:CDS | 40.0% | |
| AATACAAAAGGCCATCATCC+TGG | - | 51726:19021-19040 | None:intergenic | 40.0% | |
| AATTACACACGGCATCATCT+AGG | - | 51726:19396-19415 | None:intergenic | 40.0% | |
| ACCTACTTACTCATCCGAAT+CGG | + | 51726:17764-17783 | MS.gene25639:intron | 40.0% | |
| ACTAACTCTCTCATGATGCA+CGG | + | 51726:17199-17218 | MS.gene25639:CDS | 40.0% | |
| ACTTGATAGAGAAGGATAGG+TGG | + | 51726:18382-18401 | MS.gene25639:intron | 40.0% | |
| AGAGAAGATGCAACCAGAAT+TGG | + | 51726:19738-19757 | MS.gene25639:CDS | 40.0% | |
| AGATGATGCCGTGTGTAATT+TGG | + | 51726:19396-19415 | MS.gene25639:intron | 40.0% | |
| AGATTACCGATCTGTCTCTT+GGG | + | 51726:17065-17084 | MS.gene25639:intron | 40.0% | |
| ATCCAGGCAATCAAACCAAT+AGG | - | 51726:19281-19300 | None:intergenic | 40.0% | |
| ATGCAGGCAATCAAACCAAT+AGG | - | 51726:17817-17836 | None:intergenic | 40.0% | |
| ATTACACACGGCATCATCTA+GGG | - | 51726:19395-19414 | None:intergenic | 40.0% | |
| CAGCTATGCGATCAAGAAAA+AGG | + | 51726:20036-20055 | MS.gene25639:intron | 40.0% | |
| CTTGATAGAGAAGGATAGGT+GGG | + | 51726:18383-18402 | MS.gene25639:intron | 40.0% | |
| GAAAGAAACTCATGGCTGTT+AGG | + | 51726:17233-17252 | MS.gene25639:CDS | 40.0% | |
| GAGCTTGACTTCGTTTAGAT+TGG | - | 51726:16566-16585 | None:intergenic | 40.0% | |
| GATGATGCCGTGTGTAATTT+GGG | + | 51726:19397-19416 | MS.gene25639:intron | 40.0% | |
| TAGCAAGTGAATGATCTCCA+TGG | - | 51726:17272-17291 | None:intergenic | 40.0% | |
| TAGGATCATTAAGCATGCCA+TGG | + | 51726:17252-17271 | MS.gene25639:CDS | 40.0% | |
| TCAAAGCAAAAACTGAGGCT+TGG | + | 51726:19637-19656 | MS.gene25639:intron | 40.0% | |
| TCCAGGCAATCAAACCAATA+GGG | - | 51726:19280-19299 | None:intergenic | 40.0% | |
| TGCAGGCAATCAAACCAATA+GGG | - | 51726:17816-17835 | None:intergenic | 40.0% | |
| TGTTCCTAAATGCAGCTTCA+CGG | - | 51726:19851-19870 | None:intergenic | 40.0% | |
| TTAGTGAGCCTCTCAACAAT+GGG | - | 51726:17184-17203 | None:intergenic | 40.0% | |
| ! | AACTTTTCATCCTCCCGATT+CGG | - | 51726:17781-17800 | None:intergenic | 40.0% |
| ! | ATTCTGGTTGCATCTTCTCT+AGG | - | 51726:19738-19757 | None:intergenic | 40.0% |
| ! | GAGCTGTTGATTGTTTGAAC+TGG | + | 51726:18068-18087 | MS.gene25639:intron | 40.0% |
| ! | TGGTTTGATTGGCTAGATGA+TGG | + | 51726:18506-18525 | MS.gene25639:intron | 40.0% |
| !! | TAGCTTTTGATTGCTGGAAC+CGG | + | 51726:18727-18746 | MS.gene25639:intron | 40.0% |
| !! | TCAATATTGGGTTGATAGCC+AGG | + | 51726:19000-19019 | MS.gene25639:intron | 40.0% |
| AACTCCAGCAGATCCAATTC+TGG | - | 51726:19754-19773 | None:intergenic | 45.0% | |
| ACATATGTTCCTCACACTGC+TGG | + | 51726:17121-17140 | MS.gene25639:CDS | 45.0% | |
| AGATTGGGATCAACTTCGAC+TGG | - | 51726:16550-16569 | None:intergenic | 45.0% | |
| ATACCTGTTGGATGAACCCT+TGG | - | 51726:19919-19938 | None:intergenic | 45.0% | |
| ATAGAGAAGGATAGGTGGGT+TGG | + | 51726:18387-18406 | MS.gene25639:intron | 45.0% | |
| ATGATGCACGGCAGAAACAA+CGG | + | 51726:17211-17230 | MS.gene25639:CDS | 45.0% | |
| ATGCCGTGTGTAATTTGGGT+AGG | + | 51726:19401-19420 | MS.gene25639:intron | 45.0% | |
| CAAGAGACAGATCGGTAATC+TGG | - | 51726:17066-17085 | None:intergenic | 45.0% | |
| CAGATTACCGATCTGTCTCT+TGG | + | 51726:17064-17083 | MS.gene25639:intron | 45.0% | |
| CCTACTTACTCATCCGAATC+GGG | + | 51726:17765-17784 | MS.gene25639:intron | 45.0% | |
| CTGTCTCTTGGGGATTACAT+TGG | + | 51726:17076-17095 | MS.gene25639:CDS | 45.0% | |
| GAACTCATTAACGCTGCCAA+GGG | + | 51726:19900-19919 | MS.gene25639:CDS | 45.0% | |
| GATTACCGATCTGTCTCTTG+GGG | + | 51726:17066-17085 | MS.gene25639:intron | 45.0% | |
| GATTGGGATCAACTTCGACT+GGG | - | 51726:16549-16568 | None:intergenic | 45.0% | |
| GCTCTATCTGATCATTCTCC+TGG | + | 51726:17855-17874 | MS.gene25639:intron | 45.0% | |
| GTAATCCCCAAGAGACAGAT+CGG | - | 51726:17074-17093 | None:intergenic | 45.0% | |
| GTTAGTGAGCCTCTCAACAA+TGG | - | 51726:17185-17204 | None:intergenic | 45.0% | |
| GTTCCTAAATGCAGCTTCAC+GGG | - | 51726:19850-19869 | None:intergenic | 45.0% | |
| TAAGATTGGGGGCTGTTGAT+TGG | + | 51726:18444-18463 | MS.gene25639:intron | 45.0% | |
| TGAACTCATTAACGCTGCCA+AGG | + | 51726:19899-19918 | MS.gene25639:CDS | 45.0% | |
| TGAGATTGAGAGAGTTGCCA+AGG | + | 51726:20060-20079 | MS.gene25639:CDS | 45.0% | |
| TGGATATCTCTCCTCTTCGT+CGG | + | 51726:19790-19809 | MS.gene25639:CDS | 45.0% | |
| TGGTTTGATTGCCTGCATGA+TGG | + | 51726:17819-17838 | MS.gene25639:intron | 45.0% | |
| TGGTTTGATTGCCTGGATGA+TGG | + | 51726:19283-19302 | MS.gene25639:intron | 45.0% | |
| TTGGATCTGCTGGAGTTGTT+AGG | + | 51726:19757-19776 | MS.gene25639:CDS | 45.0% | |
| ! | TAGTTGATGCTGTCGTCAAC+AGG | + | 51726:17317-17336 | MS.gene25639:CDS | 45.0% |
| !! | TCCCTATTGGTTTGATTGCC+TGG | + | 51726:17812-17831 | MS.gene25639:intron | 45.0% |
| AACTTCGACTGGGATAGCGA+CGG | - | 51726:16539-16558 | None:intergenic | 50.0% | |
| ACTTACTCATCCGAATCGGG+AGG | + | 51726:17768-17787 | MS.gene25639:intron | 50.0% | |
| ATGTTCCTCACACTGCTGGT+AGG | + | 51726:17125-17144 | MS.gene25639:CDS | 50.0% | |
| CTCAGTGTCCCATTGTTGAG+AGG | + | 51726:17173-17192 | MS.gene25639:CDS | 50.0% | |
| GATCTGCTGGAGTTGTTAGG+AGG | + | 51726:19760-19779 | MS.gene25639:CDS | 50.0% | |
| GCAACCAGAATTGGATCTGC+TGG | + | 51726:19747-19766 | MS.gene25639:CDS | 50.0% | |
| GGATATCTCTCCTCTTCGTC+GGG | + | 51726:19791-19810 | MS.gene25639:CDS | 50.0% | |
| GGGGATTACATTGGAGCAAG+AGG | + | 51726:17085-17104 | MS.gene25639:CDS | 50.0% | |
| TCCTCTTCGTCGGGTTAATC+AGG | + | 51726:19800-19819 | MS.gene25639:CDS | 50.0% | |
| ! | ATTGGGGGCTGTTGATTGGT+TGG | + | 51726:18448-18467 | MS.gene25639:intron | 50.0% |
| !! | CCCGATTCGGATGAGTAAGT+AGG | - | 51726:17768-17787 | None:intergenic | 50.0% |
| !! | GGTACTCAAAGAAGCGCTTC+AGG | + | 51726:17146-17165 | MS.gene25639:CDS | 50.0% |
| !! | TGGGTTGATAGCCAGGATGA+TGG | + | 51726:19007-19026 | MS.gene25639:intron | 50.0% |
| AGTTGTTAGGAGGCAGGCTG+TGG | + | 51726:19770-19789 | MS.gene25639:CDS | 55.0% | |
| ATGGAGCTTCGACGACGTTC+AGG | + | 51726:16594-16613 | MS.gene25639:CDS | 55.0% | |
| CTGCCAAGGGTTCATCCAAC+AGG | + | 51726:19913-19932 | MS.gene25639:CDS | 55.0% | |
| GAACGTCGTCGAAGCTCCAT+TGG | - | 51726:16594-16613 | None:intergenic | 55.0% | |
| GAGTACCTACCAGCAGTGTG+AGG | - | 51726:17133-17152 | None:intergenic | 55.0% | |
| GCCTGATTAACCCGACGAAG+AGG | - | 51726:19804-19823 | None:intergenic | 55.0% | |
| GTGCCCGTGAAGCTGCATTT+AGG | + | 51726:19844-19863 | MS.gene25639:CDS | 55.0% | |
| TGCTGGAGTTGTTAGGAGGC+AGG | + | 51726:19764-19783 | MS.gene25639:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| 51726 | gene | 16523 | 20093 | 16523 | ID=MS.gene25639 |
| 51726 | mRNA | 16523 | 20093 | 16523 | ID=MS.gene25639.t1;Parent=MS.gene25639 |
| 51726 | exon | 16523 | 16615 | 16523 | ID=MS.gene25639.t1.exon1;Parent=MS.gene25639.t1 |
| 51726 | CDS | 16523 | 16615 | 16523 | ID=cds.MS.gene25639.t1;Parent=MS.gene25639.t1 |
| 51726 | exon | 17067 | 17338 | 17067 | ID=MS.gene25639.t1.exon2;Parent=MS.gene25639.t1 |
| 51726 | CDS | 17067 | 17338 | 17067 | ID=cds.MS.gene25639.t1;Parent=MS.gene25639.t1 |
| 51726 | exon | 19731 | 19934 | 19731 | ID=MS.gene25639.t1.exon3;Parent=MS.gene25639.t1 |
| 51726 | CDS | 19731 | 19934 | 19731 | ID=cds.MS.gene25639.t1;Parent=MS.gene25639.t1 |
| 51726 | exon | 20039 | 20093 | 20039 | ID=MS.gene25639.t1.exon4;Parent=MS.gene25639.t1 |
| 51726 | CDS | 20039 | 20093 | 20039 | ID=cds.MS.gene25639.t1;Parent=MS.gene25639.t1 |
| Gene Sequence |
| Protein sequence |
